pycom04g02790

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
OG0001515
Physical Location & Seq
Forward (+)
2572728 .. 2574243
1516 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g02790.1

Sequence Viewer

Length: 1407 bp
ATGGGATTTGAGAAAGAGCATATAGTGATGCTGCCGTTCATGGCTCAAGGCCATATCATCCCATTCCTAGCACTTGCAAAGCAAACCCAACAGTCCACAAACTTCACAGTCACCATCGCCACCACCCCTCTCAACATCAAATCCCTCCAATCCACCATTTCCTCCGTCTCATCCAATCACAACAACATCCACTTGGCCGAGCTTCCCTTTTGCAGCTCAGACCACGACCTTCCCCCCAGCACAGAAACCACCGAGAACCTCCCATTCGCCAAAATGATCAACCTTTCCGCCGCCTCACTCGCCCTCGAACCTCCTTCTCGCCGCCTCATCTCCTACATCATCGAAAAAGAAGGCTGCCCGCCGCTATGTTTGATCTCTGACGTGTTCTTCGGATGGGCTACTGATCTTGCAAACAGCCTAGGAACTGTCAATGTGACTTTCACCACGGGCGGGGGCTTACGGAACTACAGCCTACACATCAGTCTGGCTCAACCTCCCTCACCGCTCCACAAGCAACGAATACTTCACCGTCCCCGGCTTGCCGGAACGCTGCAGGTTCCACATCTCTCAGCTGCAGACGGTACAGATTCTTGGTCAAAATTTTTCCAGCCCCAGATTTCGGGTTCTACAAAATCTTTTGGTTGGCTGTGTAATACTGTGGAGGAAATTGAGCCGTTGGGATTGGATATCTTGCGGGATAACTTGAAGCTTCCTGTTTGGTGCATTGGTCCTCTAATTCCTACTGAGGCACTCAAAAATTCATCCACATTGGACTTAAAGGTCTCGAGGCAGCGCGCTGGAAAAGAACTGTGCTTTTCCGCCGAGAAATGCTTCAAGTGGCTTGACTCGCAAGGTTCGAATTCTGTAATTTACATCTCATTTGGTTCTCAGAACACAATCAGGGCAACCCAAATGATGGAATTGGCTGGTGGGTTGGAAGAAAGCGGAAAGCCTTTTGTTTGGGTGATAAGGCCTCCGGTGGGCTTTGATCTGAAGGGAGAGTTCAAAGCACAGTGGCTGCCTGACGGGTTTGAGGAAAGAATGAGTAAACGAAAACAGGGGTTGCTAGTGCACAACTGGGCACCCCAGTTGGAGATTTTGTCACACAAATCCACTGGGTTTTTTGTGAGCCATTGCGGGTGGAATTCAGTGATGGAGAGCTTGAGCCACGGCGTGCCGATTGTGGGGTGGCCGTTGGCGGTGGAGCAAGCTTATAATTCGAAGATGTTGGTGGAGGAGATGGGTGTGAGTGTGGAGCCGACAAGGGGTGTGCAGAAAAATCAATTAGAGGTAATGATGGTGATCAAGGAAAGGACAAGGGGTCTTCTGTCAAGGCCATGGAGGATTTTGTGGCTGCTCTTGTATCAAAGAAACAAGATTAGTCAAAAGTTACTTAGAGGTGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046527 GO:0080043 GO:0080044
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

469

Amino Acids

52.16

Weight (kDa)

8.54

Isoelectric Point (pI)

54.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_N PF26168 7 - 247 1.1e-07 Glycosyltransferase, N-terminal domain
UDPGT PF00201 278 - 414 1.5e-20 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1215
AasI GACNNNNNNGTC 1 cut(s) 779
Acc36I ACCTGC 1 cut(s) 544
AccB1I GGYRCC 1 cut(s) 1081
AccB7I CCANNNNNTGG 1 cut(s) 916
AccBSI CCGCTC 1 cut(s) 505
AccII CGCG 1 cut(s) 795
AcoI YGGCCR 2 cut(s) 195, 1190
AcsI RAATTY 4 cut(s) 599, 757, 859, 1144
AcuI CTGAAG 1 cut(s) 1013
AdeI CACNNNGTG 1 cut(s) 1174
AfaI GTAC 1 cut(s) 583
AfiI CCNNNNNNNGG 6 cut(s) 450, 619, 916, 980, 1184, 1265
AflIII ACRYGT 1 cut(s) 381
AgsI TTSAA 3 cut(s) 706, 835, 1006
AhdI GACNNNNNGTC 1 cut(s) 1320
AjiI CACGTC 1 cut(s) 382
AluBI AGCT 6 cut(s) 202, 216, 572, 709, 1161, 1211
AluI AGCT 6 cut(s) 202, 216, 572, 709, 1161, 1211
Alw21I GWGCWC 1 cut(s) 1074
Alw26I GTCTC 2 cut(s) 172, 787
Alw44I GTGCAC 1 cut(s) 1070
AlwNI CAGNNNCTG 1 cut(s) 1018
Ama87I CYCGRG 1 cut(s) 784
AoxI GGCC 5 cut(s) 49, 195, 971, 1190, 1334
ApaLI GTGCAC 1 cut(s) 1070
ApeKI GCWGC 8 cut(s) 31, 213, 354, 550, 572, 790, 1018, 1354
ApoI RAATTY 4 cut(s) 599, 757, 859, 1144
ArsI GACNNNNNNTTYG 2 cut(s) 371, 403
Asp700I GAANNNNTTC 1 cut(s) 830
AspA2I CCTAGG 1 cut(s) 418
AspLEI GCGC 2 cut(s) 795, 797
AspS9I GGNCC 1 cut(s) 728
AsuC2I CCSGG 1 cut(s) 535
AsuHPI GGTGA 6 cut(s) 103, 433, 492, 518, 976, 1312
AsuII TTCGAA 2 cut(s) 857, 1220
AvaI CYCGRG 1 cut(s) 784
AvaII GGWCC 1 cut(s) 728
AvrII CCTAGG 1 cut(s) 418
BaeGI GKGCMC 2 cut(s) 1074, 1084
BanI GGYRCC 1 cut(s) 1081
BbsI GAAGAC 1 cut(s) 1316
Bbv12I GWGCWC 1 cut(s) 1074
BbvI GCAGC 8 cut(s) 18, 225, 341, 537, 559, 802, 1005, 1341
BccI CCATC 6 cut(s) 122, 387, 910, 1147, 1234, 1291
BceAI ACGGC 4 cut(s) 19, 658, 1177, 1186
BclI TGATCA 2 cut(s) 276, 1302
BcnI CCSGG 1 cut(s) 535
BcoDI GTCTC 2 cut(s) 172, 787
BfaI CTAG 3 cut(s) 68, 419, 1067
BfmI CTRYAG 3 cut(s) 466, 551, 573
BfuAI ACCTGC 1 cut(s) 544
BlnI CCTAGG 1 cut(s) 418
Bme1390I CCNGG 1 cut(s) 535
Bme18I GGWCC 1 cut(s) 728
BmeRI GACNNNNNGTC 1 cut(s) 1320
BmeT110I CYCGRG 1 cut(s) 784
BmgBI CACGTC 1 cut(s) 382
BmgT120I GGNCC 1 cut(s) 728
BmiI GGNNCC 3 cut(s) 558, 1083, 1257
BmrFI CCNGG 1 cut(s) 535
BmrI ACTGGG 3 cut(s) 1081, 1087, 1125
BmsI GCATC 1 cut(s) 18
BmuI ACTGGG 3 cut(s) 1081, 1087, 1125
BpiI GAAGAC 1 cut(s) 1316
Bpu14I TTCGAA 2 cut(s) 857, 1220
BpuEI CTTGAG 2 cut(s) 30, 1183
BpuMI CCSGG 1 cut(s) 535
BsaBI GATNNNNATC 1 cut(s) 1301
BsaI GGTCTC 1 cut(s) 787
BsaJI CCNNGG 5 cut(s) 418, 444, 533, 1168, 1337
BsaWI WCCGGW 1 cut(s) 976
BsaXI ACNNNNNCTCC 2 cut(s) 1085, 1115
Bsc4I CCNNNNNNNGG 6 cut(s) 450, 619, 916, 980, 1184, 1265
Bse1I ACTGG 3 cut(s) 1082, 1087, 1120
Bse3DI GCAATG 1 cut(s) 1132
Bse8I GATNNNNATC 1 cut(s) 1301
BseDI CCNNGG 5 cut(s) 418, 444, 533, 1168, 1337
BseGI GGATG 5 cut(s) 57, 170, 186, 398, 761
BseJI GATNNNNATC 1 cut(s) 1301
BseLI CCNNNNNNNGG 6 cut(s) 450, 619, 916, 980, 1184, 1265
BseMI GCAATG 1 cut(s) 1132
BseMII CTCAG 4 cut(s) 231, 582, 735, 902
BseNI ACTGG 3 cut(s) 1082, 1087, 1120
BsePI GCGCGC 1 cut(s) 793
BseRI GAGGAG 1 cut(s) 1250
BseSI GKGCMC 2 cut(s) 1074, 1084
BseXI GCAGC 8 cut(s) 18, 225, 341, 537, 559, 802, 1005, 1341
BseYI CCCAGC 1 cut(s) 236
BsgI GTGCAG 1 cut(s) 1292
Bsh1236I CGCG 1 cut(s) 795
BshFI GGCC 5 cut(s) 51, 197, 973, 1192, 1336
BshNI GGYRCC 1 cut(s) 1081
BsiHKAI GWGCWC 1 cut(s) 1074
BsiHKCI CYCGRG 1 cut(s) 784
BsiSI CCGG 3 cut(s) 535, 543, 977
BslFI GGGAC 1 cut(s) 516
BslI CCNNNNNNNGG 6 cut(s) 450, 619, 916, 980, 1184, 1265
BsmAI GTCTC 2 cut(s) 172, 787
BsmBI CGTCTC 1 cut(s) 172
BsmFI GGGAC 1 cut(s) 516
BsnI GGCC 5 cut(s) 51, 197, 973, 1192, 1336
Bso31I GGTCTC 1 cut(s) 787
BsoBI CYCGRG 1 cut(s) 784
Bsp119I TTCGAA 2 cut(s) 857, 1220
Bsp1286I GDGCHC 2 cut(s) 1074, 1084
Bsp143I GATC 5 cut(s) 276, 372, 403, 988, 1302
Bsp19I CCATGG 1 cut(s) 1337
BspANI GGCC 5 cut(s) 51, 197, 973, 1192, 1336
BspCNI CTCAG 4 cut(s) 230, 581, 736, 901
BspFNI CGCG 1 cut(s) 795
BspLI GGNNCC 3 cut(s) 558, 1083, 1257
BspMAI CTGCAG 2 cut(s) 555, 577
BspMI ACCTGC 1 cut(s) 544
BspT104I TTCGAA 2 cut(s) 857, 1220
BspT107I GGYRCC 1 cut(s) 1081
BspTNI GGTCTC 1 cut(s) 787
BsrBI CCGCTC 1 cut(s) 505
BsrDI GCAATG 1 cut(s) 1132
BsrI ACTGG 3 cut(s) 1082, 1087, 1120
BssECI CCNNGG 5 cut(s) 418, 444, 533, 1168, 1337
BssHII GCGCGC 1 cut(s) 793
BssMI GATC 5 cut(s) 276, 372, 403, 988, 1302
BssT1I CCWWGG 2 cut(s) 418, 1337
Bst4CI ACNGT 8 cut(s) 93, 109, 427, 530, 581, 658, 810, 1014
BstBI TTCGAA 2 cut(s) 857, 1220
BstC8I GCNNGC 5 cut(s) 359, 540, 795, 1175, 1209
BstDEI CTNAG 5 cut(s) 217, 568, 744, 888, 1394
BstDSI CCRYGG 3 cut(s) 444, 1168, 1337
BstF5I GGATG 5 cut(s) 57, 170, 186, 398, 761
BstFNI CGCG 1 cut(s) 795
BstHHI GCGC 2 cut(s) 795, 797
BstKTI GATC 5 cut(s) 279, 375, 406, 991, 1305
BstMAI GTCTC 2 cut(s) 172, 787
BstMBI GATC 5 cut(s) 276, 372, 403, 988, 1302
BstMWI GCNNNNNNNGC 3 cut(s) 299, 511, 847
BstSCI CCNGG 1 cut(s) 533
BstSFI CTRYAG 3 cut(s) 466, 551, 573
BstSLI GKGCMC 2 cut(s) 1074, 1084
BstUI CGCG 1 cut(s) 795
BstV1I GCAGC 8 cut(s) 18, 225, 341, 537, 559, 802, 1005, 1341
BstV2I GAAGAC 1 cut(s) 1316
BsuRI GGCC 5 cut(s) 51, 197, 973, 1192, 1336
BtgI CCRYGG 3 cut(s) 444, 1168, 1337
BtgZI GCGATG 1 cut(s) 100
BtrI CACGTC 1 cut(s) 382
BtsCI GGATG 5 cut(s) 57, 170, 186, 398, 761
BtsIMutI CAGTG 3 cut(s) 1019, 1113, 1155
BveI ACCTGC 1 cut(s) 544
Cac8I GCNNGC 5 cut(s) 359, 540, 795, 1175, 1209
CaiI CAGNNNCTG 1 cut(s) 1018
CfoI GCGC 2 cut(s) 795, 797
Cfr13I GGNCC 1 cut(s) 728
Csp6I GTAC 1 cut(s) 582
CviAII CATG 2 cut(s) 40, 1338
CviQI GTAC 1 cut(s) 582
DdeI CTNAG 5 cut(s) 217, 568, 744, 888, 1394
DpnI GATC 5 cut(s) 278, 374, 405, 990, 1304
DpnII GATC 5 cut(s) 276, 372, 403, 988, 1302
DraIII CACNNNGTG 1 cut(s) 1174
DrdI GACNNNNNNGTC 1 cut(s) 779
DriI GACNNNNNGTC 1 cut(s) 1320
DseDI GACNNNNNNGTC 1 cut(s) 779
EaeI YGGCCR 2 cut(s) 195, 1190
Eam1105I GACNNNNNGTC 1 cut(s) 1320
EciI GGCGGA 2 cut(s) 277, 808
Eco130I CCWWGG 2 cut(s) 418, 1337
Eco147I AGGCCT 1 cut(s) 973
Eco31I GGTCTC 1 cut(s) 787
Eco32I GATATC 1 cut(s) 688
Eco47I GGWCC 1 cut(s) 728
Eco57I CTGAAG 1 cut(s) 1013
Eco88I CYCGRG 1 cut(s) 784
EcoRI GAATTC 2 cut(s) 859, 1144
EcoRV GATATC 1 cut(s) 688
EcoT14I CCWWGG 2 cut(s) 418, 1337
ErhI CCWWGG 2 cut(s) 418, 1337
Esp3I CGTCTC 1 cut(s) 172
FaeI CATG 2 cut(s) 43, 1341
FaiI YATR 7 cut(s) 21, 23, 41, 54, 367, 1215, 1339
FaqI GGGAC 1 cut(s) 516
FatI CATG 2 cut(s) 39, 1337
FauI CCCGC 4 cut(s) 366, 443, 687, 1130
FbaI TGATCA 2 cut(s) 276, 1302
FokI GGATG 5 cut(s) 44, 157, 173, 405, 748
FspBI CTAG 3 cut(s) 68, 419, 1067
GlaI GCGC 2 cut(s) 794, 796
GsaI CCCAGC 1 cut(s) 240
HaeIII GGCC 5 cut(s) 51, 197, 973, 1192, 1336
HapII CCGG 3 cut(s) 535, 543, 977
HhaI GCGC 2 cut(s) 795, 797
Hin1II CATG 2 cut(s) 43, 1341
Hin6I GCGC 2 cut(s) 793, 795
HinP1I GCGC 2 cut(s) 793, 795
HindIII AAGCTT 2 cut(s) 707, 1209
HinfI GANTC 2 cut(s) 587, 845
HpaII CCGG 3 cut(s) 535, 543, 977
HphI GGTGA 6 cut(s) 103, 433, 492, 518, 976, 1312
Hpy166II GTNNAC 3 cut(s) 96, 1049, 1072
Hpy188I TCNGA 5 cut(s) 220, 379, 392, 891, 993
Hpy188III TCNNGA 1 cut(s) 784
Hpy8I GTNNAC 3 cut(s) 96, 1049, 1072
HpyAV CCTTC 4 cut(s) 239, 324, 344, 988
HpyCH4III ACNGT 8 cut(s) 93, 109, 427, 530, 581, 658, 810, 1014
HpyCH4IV ACGT 1 cut(s) 381
HpyCH4V TGCA 8 cut(s) 77, 213, 410, 553, 575, 723, 1072, 1273
HpyF10VI GCNNNNNNNGC 3 cut(s) 299, 511, 847
HpyF3I CTNAG 5 cut(s) 217, 568, 744, 888, 1394
HpySE526I ACGT 1 cut(s) 381
Hsp92II CATG 2 cut(s) 43, 1341
HspAI GCGC 2 cut(s) 793, 795
Ksp22I TGATCA 2 cut(s) 276, 1302
Kzo9I GATC 5 cut(s) 276, 372, 403, 988, 1302
LmnI GCTCC 3 cut(s) 510, 1204, 1255
Lsp1109I GCAGC 8 cut(s) 18, 225, 341, 537, 559, 802, 1005, 1341
LweI GCATC 1 cut(s) 18
MaeI CTAG 3 cut(s) 68, 419, 1067
MaeII ACGT 1 cut(s) 381
MaeIII GTNAC 4 cut(s) 109, 433, 1101, 1389
MalI GATC 5 cut(s) 278, 374, 405, 990, 1304
MbiI CCGCTC 1 cut(s) 505
MboI GATC 5 cut(s) 276, 372, 403, 988, 1302
MboII GAAGA 4 cut(s) 379, 950, 1234, 1316
MhlI GDGCHC 2 cut(s) 1074, 1084
MlyI GAGTC 1 cut(s) 839
MmeI TCCRAC 2 cut(s) 915, 1071
MroXI GAANNNNTTC 1 cut(s) 830
MseI TTAA 1 cut(s) 776
MspA1I CMGCKG 1 cut(s) 572
MspI CCGG 3 cut(s) 535, 543, 977
MspR9I CCNGG 1 cut(s) 535
MvnI CGCG 1 cut(s) 795
MwoI GCNNNNNNNGC 3 cut(s) 299, 511, 847
NciI CCSGG 1 cut(s) 535
NcoI CCATGG 1 cut(s) 1337
NdeII GATC 5 cut(s) 276, 372, 403, 988, 1302
NlaIII CATG 2 cut(s) 43, 1341
NlaIV GGNNCC 3 cut(s) 558, 1083, 1257
NmeAIII GCCGAG 2 cut(s) 223, 847
NmuCI GTSAC 3 cut(s) 109, 433, 1101
NspV TTCGAA 2 cut(s) 857, 1220
PaeR7I CTCGAG 1 cut(s) 784
PauI GCGCGC 1 cut(s) 793
PceI AGGCCT 1 cut(s) 973
PcsI WCGNNNNNNNCGW 1 cut(s) 854
PdmI GAANNNNTTC 1 cut(s) 830
PfeI GAWTC 1 cut(s) 587
PflMI CCANNNNNTGG 1 cut(s) 916
PleI GAGTC 1 cut(s) 839
PpsI GAGTC 1 cut(s) 839
PsiI TTATAA 1 cut(s) 1215
PspFI CCCAGC 1 cut(s) 236
PspN4I GGNNCC 3 cut(s) 558, 1083, 1257
PspPI GGNCC 1 cut(s) 728
PstI CTGCAG 2 cut(s) 555, 577
PstNI CAGNNNCTG 1 cut(s) 1018
PteI GCGCGC 1 cut(s) 793
PvuII CAGCTG 1 cut(s) 572
RsaI GTAC 1 cut(s) 583
RsaNI GTAC 1 cut(s) 582
SaqAI TTAA 1 cut(s) 776
Sau3AI GATC 5 cut(s) 276, 372, 403, 988, 1302
Sau96I GGNCC 1 cut(s) 728
SchI GAGTC 1 cut(s) 839
ScrFI CCNGG 1 cut(s) 535
SduI GDGCHC 2 cut(s) 1074, 1084
SfaNI GCATC 1 cut(s) 18
SfcI CTRYAG 3 cut(s) 466, 551, 573
Sfr274I CTCGAG 1 cut(s) 784
SfuI TTCGAA 2 cut(s) 857, 1220
SinI GGWCC 1 cut(s) 728
SlaI CTCGAG 1 cut(s) 784
SmlI CTYRAG 3 cut(s) 45, 784, 1162
SmoI CTYRAG 3 cut(s) 45, 784, 1162
SseBI AGGCCT 1 cut(s) 973
SspMI CTAG 3 cut(s) 68, 419, 1067
StuI AGGCCT 1 cut(s) 973
StyD4I CCNGG 1 cut(s) 533
StyI CCWWGG 2 cut(s) 418, 1337
TaaI ACNGT 8 cut(s) 93, 109, 427, 530, 581, 658, 810, 1014
TaiI ACGT 1 cut(s) 384
TaqI TCGA 5 cut(s) 306, 342, 785, 857, 1220
TauI GCSGC 3 cut(s) 293, 324, 364
TfiI GAWTC 1 cut(s) 587
Tru1I TTAA 1 cut(s) 776
Tru9I TTAA 1 cut(s) 776
TscAI CASTG 3 cut(s) 1019, 1120, 1155
TseFI GTSAC 3 cut(s) 109, 433, 1101
TseI GCWGC 8 cut(s) 31, 213, 354, 550, 572, 790, 1018, 1354
Tsp45I GTSAC 3 cut(s) 109, 433, 1101
TspDTI ATGAA 2 cut(s) 28, 750
TspGWI ACGGA 2 cut(s) 154, 475
TspRI CASTG 3 cut(s) 1019, 1120, 1155
Van91I CCANNNNNTGG 1 cut(s) 916
VneI GTGCAC 1 cut(s) 1070
VpaK11BI GGWCC 1 cut(s) 728
XapI RAATTY 4 cut(s) 599, 757, 859, 1144
XhoI CTCGAG 1 cut(s) 784
XmaJI CCTAGG 1 cut(s) 418
XmnI GAANNNNTTC 1 cut(s) 830
XspI CTAG 3 cut(s) 68, 419, 1067
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.