pycom04g02770

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
OG0001515
Physical Location & Seq
Forward (+)
2525275 .. 2526490
1216 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g02770.2

Sequence Viewer

Length: 963 bp
ATGGGATTTGAGAAAGAGCATATAGTGATGCTGCTGTTCATGGCTCAAGGCCATATCATCTCATTCCTAGCACTTGCAAAGCAAATCAAACAGTCCACAAACTTCAGTCACCATCGCCACCACCCCTCTCAACATCAAATCCCTCCAATCCACCATTTCCTCCTCCTCATCCAATCACAACAACATCAACCTGGTCGAGCTTCCCTTCTACAGCTCAGACCACGACCTCCCCCCCAACACAGAAACCACCGAGAACCTCTCCCTCGCCACAATGATCAACATTTTCGCTCCATAAGCAACAAATACTTCACCGTCCCCGGTTTCCCGGAACGCTGCAGGTTCCACATCTCTCAGCTGCATCCGTTTATAAGAGCTGCAGACGGCACAGATTCTTGGTCAAAATTTTTCCAGCCCCAAATTTCGGGTTCCACAAAATCTTTTGGTTGGCTATGTAATACTGTGGAGGAAATTGAGCCGTTGGGATTGGATATCTTGAGGGATAACTTAAAGCTTCCTGTTTGGTGCATTGGTCCTCTAATTCCTATTGAGGCACTCAAAAACTCATCCACATTGGCCTTAAAAGTCTCGAGGCAGCAGTTCAAAGCAGACTGGCTGCCAGACGGGTTTGAGGAAAGAATGAGTAAACGAAAACAGGGGTTGCTAGTGGACAACTGGGCACCCCAGTTGGAGATTTTGTCACACAAATCGACAGGGTTTTTTGTGAGCCATTGCGGGTGGAAATCAGTGATAGAGAGCTTGAGCCAGGGCGTGCCGATTGTGGGGTGGCCGTTGGCGGCGGAGCAGGCTTATAATTCGAAGATGTTGAGTAACATTGGATGGAAGGAGGTGAATGAGGTGAAGGAGGTGATTGATTTGGTGATGGATGAGAGTGAGAAGGGAGGGGAGATGAGGAAAAATGCCGGTGAGATTAAGGAGAAATTAAGAAGATCAATTAGAGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046527 GO:0080043 GO:0080044
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

321

Amino Acids

36.82

Weight (kDa)

9.35

Isoelectric Point (pI)

59.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 368, 810
Acc36I ACCTGC 1 cut(s) 327
AccB1I GGYRCC 1 cut(s) 676
AciI CCGC 3 cut(s) 732, 794, 797
AcoI YGGCCR 1 cut(s) 785
AcsI RAATTY 2 cut(s) 401, 417
AcuI CTGAAG 1 cut(s) 88
AfiI CCNNNNNNNGG 2 cut(s) 421, 779
AgsI TTSAA 1 cut(s) 601
AjnI CCWGG 2 cut(s) 190, 762
AluBI AGCT 6 cut(s) 200, 214, 355, 374, 511, 756
AluI AGCT 6 cut(s) 200, 214, 355, 374, 511, 756
Alw26I GTCTC 1 cut(s) 589
Ama87I CYCGRG 1 cut(s) 586
AoxI GGCC 3 cut(s) 49, 573, 785
ApeKI GCWGC 6 cut(s) 31, 333, 355, 374, 592, 613
ApoI RAATTY 2 cut(s) 401, 417
AspS9I GGNCC 1 cut(s) 530
AsuC2I CCSGG 2 cut(s) 318, 326
AsuHPI GGTGA 7 cut(s) 101, 301, 859, 868, 877, 889, 935
AsuII TTCGAA 1 cut(s) 815
AvaI CYCGRG 1 cut(s) 586
AvaII GGWCC 1 cut(s) 530
BaeGI GKGCMC 1 cut(s) 679
BanI GGYRCC 1 cut(s) 676
BbvI GCAGC 6 cut(s) 18, 320, 342, 361, 600, 604
BccI CCATC 3 cut(s) 120, 831, 874
BceAI ACGGC 3 cut(s) 397, 460, 772
BciT130I CCWGG 2 cut(s) 192, 764
BclI TGATCA 1 cut(s) 274
BcnI CCSGG 2 cut(s) 318, 326
BcoDI GTCTC 1 cut(s) 589
BfaI CTAG 2 cut(s) 68, 662
BfmI CTRYAG 3 cut(s) 209, 334, 375
BfuAI ACCTGC 1 cut(s) 327
BisI GCNGC 7 cut(s) 32, 334, 356, 375, 593, 614, 795
BlsI GCNGC 7 cut(s) 33, 335, 357, 376, 594, 615, 796
Bme1390I CCNGG 4 cut(s) 192, 318, 326, 764
Bme18I GGWCC 1 cut(s) 530
BmeT110I CYCGRG 1 cut(s) 586
BmgT120I GGNCC 1 cut(s) 530
BmiI GGNNCC 3 cut(s) 341, 427, 678
BmrFI CCNGG 4 cut(s) 192, 318, 326, 764
BmrI ACTGGG 2 cut(s) 676, 682
BmsI GCATC 2 cut(s) 18, 367
BmuI ACTGGG 2 cut(s) 676, 682
BplI GAGNNNNNCTC 2 cut(s) 243, 275
Bpu14I TTCGAA 1 cut(s) 815
BpuEI CTTGAG 3 cut(s) 30, 514, 778
BpuMI CCSGG 2 cut(s) 318, 326
BsaJI CCNNGG 2 cut(s) 316, 763
BsaXI ACNNNNNCTCC 2 cut(s) 680, 710
Bsc4I CCNNNNNNNGG 2 cut(s) 421, 779
Bse118I RCCGGY 1 cut(s) 920
Bse1I ACTGG 3 cut(s) 614, 677, 682
Bse3DI GCAATG 1 cut(s) 727
BseBI CCWGG 2 cut(s) 192, 764
BseDI CCNNGG 2 cut(s) 316, 763
BseGI GGATG 5 cut(s) 168, 358, 563, 842, 889
BseLI CCNNNNNNNGG 2 cut(s) 421, 779
BseMI GCAATG 1 cut(s) 727
BseMII CTCAG 2 cut(s) 229, 365
BseNI ACTGG 3 cut(s) 614, 677, 682
BseRI GAGGAG 2 cut(s) 152, 155
BseSI GKGCMC 1 cut(s) 679
BseXI GCAGC 6 cut(s) 18, 320, 342, 361, 600, 604
BshFI GGCC 3 cut(s) 51, 575, 787
BshNI GGYRCC 1 cut(s) 676
BsiHKCI CYCGRG 1 cut(s) 586
BsiSI CCGG 3 cut(s) 318, 326, 921
BslFI GGGAC 1 cut(s) 299
BslI CCNNNNNNNGG 2 cut(s) 421, 779
BsmAI GTCTC 1 cut(s) 589
BsmFI GGGAC 1 cut(s) 299
BsnI GGCC 3 cut(s) 51, 575, 787
BsoBI CYCGRG 1 cut(s) 586
Bsp119I TTCGAA 1 cut(s) 815
Bsp1286I GDGCHC 1 cut(s) 679
Bsp143I GATC 2 cut(s) 274, 947
BspACI CCGC 3 cut(s) 732, 794, 797
BspANI GGCC 3 cut(s) 51, 575, 787
BspCNI CTCAG 2 cut(s) 228, 364
BspLI GGNNCC 3 cut(s) 341, 427, 678
BspMAI CTGCAG 2 cut(s) 338, 379
BspMI ACCTGC 1 cut(s) 327
BspT104I TTCGAA 1 cut(s) 815
BspT107I GGYRCC 1 cut(s) 676
BsrDI GCAATG 1 cut(s) 727
BsrFI RCCGGY 1 cut(s) 920
BsrI ACTGG 3 cut(s) 614, 677, 682
BssAI RCCGGY 1 cut(s) 920
BssECI CCNNGG 2 cut(s) 316, 763
BssMI GATC 2 cut(s) 274, 947
Bst2UI CCWGG 2 cut(s) 192, 764
Bst4CI ACNGT 3 cut(s) 93, 313, 460
BstBI TTCGAA 1 cut(s) 815
BstC8I GCNNGC 2 cut(s) 770, 804
BstDEI CTNAG 2 cut(s) 215, 351
BstF5I GGATG 5 cut(s) 168, 358, 563, 842, 889
BstKTI GATC 2 cut(s) 277, 950
BstMAI GTCTC 1 cut(s) 589
BstMBI GATC 2 cut(s) 274, 947
BstMWI GCNNNNNNNGC 2 cut(s) 294, 803
BstNI CCWGG 2 cut(s) 192, 764
BstSCI CCNGG 4 cut(s) 190, 316, 324, 762
BstSFI CTRYAG 3 cut(s) 209, 334, 375
BstSLI GKGCMC 1 cut(s) 679
BstV1I GCAGC 6 cut(s) 18, 320, 342, 361, 600, 604
BsuRI GGCC 3 cut(s) 51, 575, 787
BtgZI GCGATG 1 cut(s) 98
BtsCI GGATG 5 cut(s) 168, 358, 563, 842, 889
BtsIMutI CAGTG 1 cut(s) 750
BveI ACCTGC 1 cut(s) 327
Cac8I GCNNGC 2 cut(s) 770, 804
Cfr10I RCCGGY 1 cut(s) 920
Cfr13I GGNCC 1 cut(s) 530
CsiI ACCWGGT 1 cut(s) 190
CviAII CATG 1 cut(s) 40
DdeI CTNAG 2 cut(s) 215, 351
DpnI GATC 2 cut(s) 276, 949
DpnII GATC 2 cut(s) 274, 947
EaeI YGGCCR 1 cut(s) 785
EciI GGCGGA 1 cut(s) 812
Eco32I GATATC 1 cut(s) 490
Eco47I GGWCC 1 cut(s) 530
Eco57I CTGAAG 1 cut(s) 88
Eco88I CYCGRG 1 cut(s) 586
EcoRII CCWGG 2 cut(s) 190, 762
EcoRV GATATC 1 cut(s) 490
FaeI CATG 1 cut(s) 43
FaiI YATR 8 cut(s) 21, 23, 41, 54, 293, 368, 451, 810
FaqI GGGAC 1 cut(s) 299
FatI CATG 1 cut(s) 39
FauI CCCGC 1 cut(s) 725
FbaI TGATCA 1 cut(s) 274
Fnu4HI GCNGC 7 cut(s) 32, 334, 356, 375, 593, 614, 795
FokI GGATG 5 cut(s) 155, 345, 550, 849, 896
Fsp4HI GCNGC 7 cut(s) 32, 334, 356, 375, 593, 614, 795
FspBI CTAG 2 cut(s) 68, 662
GluI GCNGC 7 cut(s) 32, 334, 356, 375, 593, 614, 795
HaeIII GGCC 3 cut(s) 51, 575, 787
HapII CCGG 3 cut(s) 318, 326, 921
Hin1II CATG 1 cut(s) 43
HindIII AAGCTT 1 cut(s) 509
HinfI GANTC 1 cut(s) 389
HpaII CCGG 3 cut(s) 318, 326, 921
HphI GGTGA 7 cut(s) 101, 301, 859, 868, 877, 889, 935
Hpy166II GTNNAC 3 cut(s) 96, 644, 667
Hpy188I TCNGA 1 cut(s) 218
Hpy188III TCNNGA 2 cut(s) 493, 586
Hpy8I GTNNAC 3 cut(s) 96, 644, 667
HpyAV CCTTC 4 cut(s) 215, 835, 853, 889
HpyCH4III ACNGT 3 cut(s) 93, 313, 460
HpyCH4V TGCA 5 cut(s) 77, 336, 358, 377, 525
HpyF10VI GCNNNNNNNGC 2 cut(s) 294, 803
HpyF3I CTNAG 2 cut(s) 215, 351
Hsp92II CATG 1 cut(s) 43
Ksp22I TGATCA 1 cut(s) 274
Kzo9I GATC 2 cut(s) 274, 947
LmnI GCTCC 2 cut(s) 293, 799
Lsp1109I GCAGC 6 cut(s) 18, 320, 342, 361, 600, 604
LweI GCATC 2 cut(s) 18, 367
MabI ACCWGGT 1 cut(s) 190
MaeI CTAG 2 cut(s) 68, 662
MaeIII GTNAC 3 cut(s) 107, 696, 827
MalI GATC 2 cut(s) 276, 949
MboI GATC 2 cut(s) 274, 947
MboII GAAGA 2 cut(s) 829, 957
MhlI GDGCHC 1 cut(s) 679
MluCI AATT 7 cut(s) 401, 417, 468, 537, 811, 938, 951
MmeI TCCRAC 1 cut(s) 666
MseI TTAA 4 cut(s) 506, 578, 930, 941
MspA1I CMGCKG 1 cut(s) 355
MspI CCGG 3 cut(s) 318, 326, 921
MspR9I CCNGG 4 cut(s) 192, 318, 326, 764
MvaI CCWGG 2 cut(s) 192, 764
MwoI GCNNNNNNNGC 2 cut(s) 294, 803
NciI CCSGG 2 cut(s) 318, 326
NdeII GATC 2 cut(s) 274, 947
NlaIII CATG 1 cut(s) 43
NlaIV GGNNCC 3 cut(s) 341, 427, 678
NmuCI GTSAC 2 cut(s) 107, 696
NspV TTCGAA 1 cut(s) 815
PaeR7I CTCGAG 1 cut(s) 586
PfeI GAWTC 1 cut(s) 389
PfoI TCCNGGA 1 cut(s) 324
PkrI GCNGC 7 cut(s) 33, 335, 357, 376, 594, 615, 796
PsiI TTATAA 2 cut(s) 368, 810
Psp6I CCWGG 2 cut(s) 190, 762
PspGI CCWGG 2 cut(s) 190, 762
PspN4I GGNNCC 3 cut(s) 341, 427, 678
PspPI GGNCC 1 cut(s) 530
PstI CTGCAG 2 cut(s) 338, 379
PvuII CAGCTG 1 cut(s) 355
SaqAI TTAA 4 cut(s) 506, 578, 930, 941
SatI GCNGC 7 cut(s) 32, 334, 356, 375, 593, 614, 795
Sau3AI GATC 2 cut(s) 274, 947
Sau96I GGNCC 1 cut(s) 530
ScrFI CCNGG 4 cut(s) 192, 318, 326, 764
SduI GDGCHC 1 cut(s) 679
SexAI ACCWGGT 1 cut(s) 190
SfaNI GCATC 2 cut(s) 18, 367
SfcI CTRYAG 3 cut(s) 209, 334, 375
Sfr274I CTCGAG 1 cut(s) 586
SfuI TTCGAA 1 cut(s) 815
SinI GGWCC 1 cut(s) 530
SlaI CTCGAG 1 cut(s) 586
SmlI CTYRAG 4 cut(s) 45, 493, 586, 757
SmoI CTYRAG 4 cut(s) 45, 493, 586, 757
Sse9I AATT 7 cut(s) 401, 417, 468, 537, 811, 938, 951
SsiI CCGC 3 cut(s) 732, 794, 797
SspMI CTAG 2 cut(s) 68, 662
StyD4I CCNGG 4 cut(s) 190, 316, 324, 762
TaaI ACNGT 3 cut(s) 93, 313, 460
TaqI TCGA 4 cut(s) 196, 587, 707, 815
TasI AATT 7 cut(s) 401, 417, 468, 537, 811, 938, 951
TauI GCSGC 1 cut(s) 797
TfiI GAWTC 1 cut(s) 389
Tru1I TTAA 4 cut(s) 506, 578, 930, 941
Tru9I TTAA 4 cut(s) 506, 578, 930, 941
TscAI CASTG 1 cut(s) 750
TseFI GTSAC 2 cut(s) 107, 696
TseI GCWGC 6 cut(s) 31, 333, 355, 374, 592, 613
Tsp45I GTSAC 2 cut(s) 107, 696
TspDTI ATGAA 1 cut(s) 28
TspGWI ACGGA 1 cut(s) 351
TspRI CASTG 1 cut(s) 750
VpaK11BI GGWCC 1 cut(s) 530
XapI RAATTY 2 cut(s) 401, 417
XhoI CTCGAG 1 cut(s) 586
XspI CTAG 2 cut(s) 68, 662
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.