Prupe.1G179400_v2.0.a1

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0001515
Physical Location & Seq
Forward (+)
15475994 .. 15478096
2103 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G179400.1

Sequence Viewer

Length: 1560 bp
ATGGCATTTGATCGTGAGCATATTGTGATGCTTCCCATGATAGCTAAGGGTCATCTCATACCATTCTTGGCACTAGCAAAGCAAATCCAACAAAAAACAGGGTTCACCATCACCATTGCCACAACCCCACTCAACATTCAATACCTGCAAGCTACCATTTCCTCAACTTCATCATCATCAAACACTCAATCACACTCCAACAATTTTGACATCAACTTGGCTGAGCTTCCATTCTGCAGCTCAGACTTTGGCTTGCCCCAAGACACTGAGAGCACAGAGAATTTGTCTCTGAAACAAATTGGAGATCTTTGTGCTGCAACAGTGAATCTTGAAGTTCCTGCTCGCCGCCTAATCTTGGATATCATCGAAAAAGAAGGCCGCCCGCCACTTTGTATTATCTCAGATATGTTCTTTGGGTGGGCTACTAATCTTGCAAAGAGCTCAGGCACTGTGAACGTGACTTTCACAACATCCGGTGCTTATGGCAGTGCAGCCTTCATGTCCATTTGGCTTAACCTCCCACACCGATCCACAGCTTTATGCGATGGCTACTTCACTCTGCCCGGGTTTCCAGATCAGTCTCGTTTTCATATCTCTCAGCTGCATCACTATATAAAAGCAGCAAATGGGACAGATTCTTGGTCAAAATTTTACCAGTCCCAGTTTTCACTTTCTACCAAATCTTTGGGTTGGTTGTGTAATACTGCTGAGGAAATTGAGCCACTTGGATTGGAGATTTTGAGGCATTACTTTAGGCTTCCTGTTTGGTCCATTGGACCTCTTATTCCCAAAGATGCTCTCAAGAACTCATCCACTTCGGATTTAAGAGTTTCAAGGCAACCTGCTGAAAAATGCATGGAGTGGCTGGACTCATATGGTTCAGATTCCGTTGTTTATATTTCCTTTGGTTCTCAGAACACAATCAGTGAAACACAGATGATGGAATTGGCTATTGGGTTAGAAGAAAGTGGAAGGGCTTTTATTTGGGTCATTAGGCCTCCAGTTGGGTATGATATGAAGGGAGAATTCAGAGCTGAATGGTTGCCTCGAGGGTTCGAAGATCGAATGTGCAAAAGCAAGAAAGGCTTGTTGGTGCACAACTGGGCACCACAGTTGGAGATTTTGTCACACAAATCCACAGGGGCATTTGTAAGTCATTGTGGGTGGAATTCAGTGCTGGAGAGCCTAAGCCAAGGAGTTCCGATTATAGGGTGGCCCTTGGCAGCCGAGCAGGCGTTTAACTCAAAGATGCTGGTGGAGGAGATGGGTGTGAGTGTGGAGCTGACAAGGGGAGTGGAGAGTGTTATTGTTGGTAAGGAGGTGAAGAGATTGATAGATTTGGTTATGGACAAAAGTGGCGAAGGAGGAGAAATGAGGGAAAAAGCTGGTGCAATTAAGGCGCAGATAAGAGCAGCAATAAGAGAGGAAGCTGAATTCAAGGGATCTTCTGCGAAGAAAATGGATGATTTTCTTGAAACCATTCTATCAGCAAGACAAGAACATAAATCTATTATTGCCGACGTGAAAGGAAAAGAAAGCGCGCCCTACACTGCAGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046527 GO:0080043 GO:0080044
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

520

Amino Acids

57.45

Weight (kDa)

5.82

Isoelectric Point (pI)

47.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 1047
Acc36I ACCTGC 2 cut(s) 153, 850
AccB1I GGYRCC 1 cut(s) 1105
AccII CGCG 1 cut(s) 1541
AciI CCGC 3 cut(s) 346, 379, 383
AclWI GGATC 2 cut(s) 522, 1450
AcsI RAATTY 5 cut(s) 280, 647, 1025, 1168, 1433
AfiI CCNNNNNNNGG 3 cut(s) 355, 1004, 1208
AgsI TTSAA 5 cut(s) 140, 332, 834, 1438, 1475
AjiI CACGTC 1 cut(s) 1522
AjuI GAANNNNNNNTTGG 4 cut(s) 936, 968, 1073, 1105
Alw21I GWGCWC 3 cut(s) 275, 443, 1098
Alw26I GTCTC 2 cut(s) 291, 585
Alw44I GTGCAC 1 cut(s) 1094
AlwI GGATC 2 cut(s) 522, 1450
AlwNI CAGNNNCTG 1 cut(s) 449
Ama87I CYCGRG 2 cut(s) 563, 1047
AoxI GGCC 3 cut(s) 376, 995, 1214
ApaLI GTGCAC 1 cut(s) 1094
ApeKI GCWGC 7 cut(s) 237, 314, 491, 601, 620, 1223, 1412
ApoI RAATTY 5 cut(s) 280, 647, 1025, 1168, 1433
Asp700I GAANNNNTTC 1 cut(s) 1479
AspLEI GCGC 3 cut(s) 1402, 1541, 1543
AspS9I GGNCC 3 cut(s) 768, 776, 1215
AsuC2I CCSGG 2 cut(s) 564, 565
AsuHPI GGTGA 3 cut(s) 97, 103, 1333
AsuII TTCGAA 1 cut(s) 1056
AvaI CYCGRG 2 cut(s) 563, 1047
AvaII GGWCC 2 cut(s) 768, 776
BaeGI GKGCMC 2 cut(s) 1098, 1108
BanI GGYRCC 1 cut(s) 1105
BanII GRGCYC 1 cut(s) 443
Bbv12I GWGCWC 3 cut(s) 275, 443, 1098
BbvCI CCTCAGC 1 cut(s) 708
BbvI GCAGC 7 cut(s) 249, 301, 503, 588, 632, 1235, 1424
BccI CCATC 4 cut(s) 116, 539, 934, 1258
BcnI CCSGG 2 cut(s) 564, 565
BcoDI GTCTC 2 cut(s) 291, 585
BfaI CTAG 1 cut(s) 74
BfmI CTRYAG 2 cut(s) 235, 1551
BfuAI ACCTGC 2 cut(s) 153, 850
BglI GCCNNNNNGGC 1 cut(s) 1232
BglII AGATCT 1 cut(s) 304
BisI GCNGC 9 cut(s) 238, 315, 346, 379, 492, 602, 621, 1224, 1413
BlpI GCTNAGC 1 cut(s) 222
BlsI GCNGC 9 cut(s) 239, 316, 347, 380, 493, 603, 622, 1225, 1414
Bme1390I CCNGG 2 cut(s) 564, 565
Bme18I GGWCC 2 cut(s) 768, 776
BmeT110I CYCGRG 2 cut(s) 563, 1047
BmgBI CACGTC 1 cut(s) 1522
BmgT120I GGNCC 3 cut(s) 768, 776, 1215
BmiI GGNNCC 1 cut(s) 1107
BmrFI CCNGG 2 cut(s) 564, 565
BmrI ACTGGG 2 cut(s) 655, 1111
BmsI GCATC 4 cut(s) 18, 613, 784, 1239
BmuI ACTGGG 2 cut(s) 655, 1111
BpmI CTGGAG 2 cut(s) 984, 1199
Bpu10I CCTNAGC 4 cut(s) 45, 442, 708, 1187
Bpu1102I GCTNAGC 1 cut(s) 222
Bpu14I TTCGAA 1 cut(s) 1056
BpuEI CTTGAG 1 cut(s) 785
BpuMI CCSGG 2 cut(s) 564, 565
BsaJI CCNNGG 3 cut(s) 563, 1192, 1218
BsaWI WCCGGW 1 cut(s) 473
BsaXI ACNNNNNCTCC 2 cut(s) 1109, 1139
Bsc4I CCNNNNNNNGG 3 cut(s) 355, 1004, 1208
Bse1I ACTGG 4 cut(s) 655, 661, 1001, 1106
Bse3DI GCAATG 1 cut(s) 114
BseDI CCNNGG 3 cut(s) 563, 1192, 1218
BseGI GGATG 3 cut(s) 470, 809, 1468
BseLI CCNNNNNNNGG 3 cut(s) 355, 1004, 1208
BseMI GCAATG 1 cut(s) 114
BseMII CTCAG 8 cut(s) 213, 255, 258, 414, 456, 611, 699, 926
BseNI ACTGG 4 cut(s) 655, 661, 1001, 1106
BsePI GCGCGC 1 cut(s) 1539
BseRI GAGGAG 2 cut(s) 1274, 1380
BseSI GKGCMC 2 cut(s) 1098, 1108
BseXI GCAGC 7 cut(s) 249, 301, 503, 588, 632, 1235, 1424
BsgI GTGCAG 1 cut(s) 510
Bsh1236I CGCG 1 cut(s) 1541
BshFI GGCC 3 cut(s) 378, 997, 1216
BshNI GGYRCC 1 cut(s) 1105
BsiHKAI GWGCWC 3 cut(s) 275, 443, 1098
BsiHKCI CYCGRG 2 cut(s) 563, 1047
BsiSI CCGG 2 cut(s) 474, 564
BslFI GGGAC 2 cut(s) 643, 643
BslI CCNNNNNNNGG 3 cut(s) 355, 1004, 1208
BsmAI GTCTC 2 cut(s) 291, 585
BsmFI GGGAC 2 cut(s) 643, 643
BsnI GGCC 3 cut(s) 378, 997, 1216
BsoBI CYCGRG 2 cut(s) 563, 1047
Bsp119I TTCGAA 1 cut(s) 1056
Bsp1286I GDGCHC 4 cut(s) 275, 443, 1098, 1108
Bsp143I GATC 6 cut(s) 10, 304, 527, 574, 1060, 1442
Bsp1720I GCTNAGC 1 cut(s) 222
BspACI CCGC 3 cut(s) 346, 379, 383
BspANI GGCC 3 cut(s) 378, 997, 1216
BspCNI CTCAG 8 cut(s) 214, 254, 259, 413, 455, 610, 700, 925
BspFNI CGCG 1 cut(s) 1541
BspLI GGNNCC 1 cut(s) 1107
BspMAI CTGCAG 2 cut(s) 239, 1555
BspMI ACCTGC 2 cut(s) 153, 850
BspPI GGATC 2 cut(s) 522, 1450
BspT104I TTCGAA 1 cut(s) 1056
BspT107I GGYRCC 1 cut(s) 1105
BsrDI GCAATG 1 cut(s) 114
BsrI ACTGG 4 cut(s) 655, 661, 1001, 1106
BssECI CCNNGG 3 cut(s) 563, 1192, 1218
BssHII GCGCGC 1 cut(s) 1539
BssMI GATC 6 cut(s) 10, 304, 527, 574, 1060, 1442
BssT1I CCWWGG 2 cut(s) 1192, 1218
Bst4CI ACNGT 3 cut(s) 322, 451, 1113
Bst6I CTCTTC 1 cut(s) 1319
BstBI TTCGAA 1 cut(s) 1056
BstC8I GCNNGC 6 cut(s) 150, 254, 343, 383, 1233, 1541
BstF5I GGATG 3 cut(s) 470, 809, 1468
BstFNI CGCG 1 cut(s) 1541
BstHHI GCGC 3 cut(s) 1402, 1541, 1543
BstKTI GATC 6 cut(s) 13, 307, 530, 577, 1063, 1445
BstMAI GTCTC 2 cut(s) 291, 585
BstMBI GATC 6 cut(s) 10, 304, 527, 574, 1060, 1442
BstMWI GCNNNNNNNGC 3 cut(s) 1083, 1232, 1397
BstSCI CCNGG 2 cut(s) 562, 563
BstSFI CTRYAG 2 cut(s) 235, 1551
BstSLI GKGCMC 2 cut(s) 1098, 1108
BstUI CGCG 1 cut(s) 1541
BstV1I GCAGC 7 cut(s) 249, 301, 503, 588, 632, 1235, 1424
BstX2I RGATCY 2 cut(s) 304, 1442
BstXI CCANNNNNNTGG 1 cut(s) 685
BstYI RGATCY 2 cut(s) 304, 1442
BsuRI GGCC 3 cut(s) 378, 997, 1216
BtgZI GCGATG 1 cut(s) 558
BtrI CACGTC 1 cut(s) 1522
BtsCI GGATG 3 cut(s) 470, 809, 1468
BtsI GCAGTG 2 cut(s) 493, 1548
BtsIMutI CAGTG 7 cut(s) 264, 327, 447, 493, 931, 1179, 1548
BveI ACCTGC 2 cut(s) 153, 850
Cac8I GCNNGC 6 cut(s) 150, 254, 343, 383, 1233, 1541
CaiI CAGNNNCTG 1 cut(s) 449
CfoI GCGC 3 cut(s) 1402, 1541, 1543
Cfr13I GGNCC 3 cut(s) 768, 776, 1215
Cfr9I CCCGGG 1 cut(s) 563
CspCI CAANNNNNGTGG 4 cut(s) 711, 746, 1275, 1310
CviAII CATG 3 cut(s) 37, 499, 856
DpnI GATC 6 cut(s) 12, 306, 529, 576, 1062, 1444
DpnII GATC 6 cut(s) 10, 304, 527, 574, 1060, 1442
Eam1104I CTCTTC 1 cut(s) 1319
EarI CTCTTC 1 cut(s) 1319
Ecl136II GAGCTC 1 cut(s) 441
Eco130I CCWWGG 2 cut(s) 1192, 1218
Eco147I AGGCCT 1 cut(s) 997
Eco24I GRGCYC 1 cut(s) 443
Eco32I GATATC 1 cut(s) 361
Eco47I GGWCC 2 cut(s) 768, 776
Eco53kI GAGCTC 1 cut(s) 441
Eco88I CYCGRG 2 cut(s) 563, 1047
EcoICRI GAGCTC 1 cut(s) 441
EcoRI GAATTC 3 cut(s) 1025, 1168, 1433
EcoRV GATATC 1 cut(s) 361
EcoT14I CCWWGG 2 cut(s) 1192, 1218
EcoT22I ATGCAT 1 cut(s) 857
EcoT38I GRGCYC 1 cut(s) 443
ErhI CCWWGG 2 cut(s) 1192, 1218
FaeI CATG 3 cut(s) 40, 502, 859
FalI AAGNNNNNCTT 2 cut(s) 1070, 1102
FaqI GGGAC 2 cut(s) 643, 643
FatI CATG 3 cut(s) 36, 498, 855
FauI CCCGC 1 cut(s) 390
FauNDI CATATG 1 cut(s) 874
Fnu4HI GCNGC 9 cut(s) 238, 315, 346, 379, 492, 602, 621, 1224, 1413
FokI GGATG 3 cut(s) 457, 796, 1475
FriOI GRGCYC 1 cut(s) 443
Fsp4HI GCNGC 9 cut(s) 238, 315, 346, 379, 492, 602, 621, 1224, 1413
FspBI CTAG 1 cut(s) 74
GlaI GCGC 3 cut(s) 1401, 1540, 1542
GluI GCNGC 9 cut(s) 238, 315, 346, 379, 492, 602, 621, 1224, 1413
GsuI CTGGAG 2 cut(s) 984, 1199
HaeIII GGCC 3 cut(s) 378, 997, 1216
HapII CCGG 2 cut(s) 474, 564
HhaI GCGC 3 cut(s) 1402, 1541, 1543
Hin1II CATG 3 cut(s) 40, 502, 859
Hin6I GCGC 3 cut(s) 1400, 1539, 1541
HinP1I GCGC 3 cut(s) 1400, 1539, 1541
HinfI GANTC 4 cut(s) 325, 635, 869, 884
HpaII CCGG 2 cut(s) 474, 564
HphI GGTGA 3 cut(s) 97, 103, 1333
Hpy166II GTNNAC 3 cut(s) 105, 454, 1096
Hpy188I TCNGA 8 cut(s) 244, 291, 403, 820, 883, 915, 1031, 1203
Hpy188III TCNNGA 5 cut(s) 14, 329, 572, 802, 1472
Hpy8I GTNNAC 3 cut(s) 105, 454, 1096
Hpy99I CGWCG 1 cut(s) 1523
HpyAV CCTTC 5 cut(s) 368, 505, 966, 1012, 1355
HpyCH4III ACNGT 3 cut(s) 322, 451, 1113
HpyCH4IV ACGT 2 cut(s) 456, 1521
HpyF10VI GCNNNNNNNGC 3 cut(s) 1083, 1232, 1397
HpySE526I ACGT 2 cut(s) 456, 1521
Hsp92II CATG 3 cut(s) 40, 502, 859
HspAI GCGC 3 cut(s) 1400, 1539, 1541
Kzo9I GATC 6 cut(s) 10, 304, 527, 574, 1060, 1442
LmnI GCTCC 1 cut(s) 1279
Lsp1109I GCAGC 7 cut(s) 249, 301, 503, 588, 632, 1235, 1424
LweI GCATC 4 cut(s) 18, 613, 784, 1239
MaeI CTAG 1 cut(s) 74
MaeII ACGT 2 cut(s) 456, 1521
MaeIII GTNAC 2 cut(s) 457, 1125
MalI GATC 6 cut(s) 12, 306, 529, 576, 1062, 1444
MboI GATC 6 cut(s) 10, 304, 527, 574, 1060, 1442
MboII GAAGA 5 cut(s) 974, 1070, 1336, 1437, 1465
MflI RGATCY 2 cut(s) 304, 1442
MhlI GDGCHC 4 cut(s) 275, 443, 1098, 1108
MlyI GAGTC 1 cut(s) 863
MmeI TCCRAC 3 cut(s) 112, 222, 1095
Mph1103I ATGCAT 1 cut(s) 857
MroXI GAANNNNTTC 1 cut(s) 1479
MseI TTAA 4 cut(s) 513, 824, 1239, 1395
MspA1I CMGCKG 1 cut(s) 601
MspI CCGG 2 cut(s) 474, 564
MspR9I CCNGG 2 cut(s) 564, 565
MvnI CGCG 1 cut(s) 1541
MwoI GCNNNNNNNGC 3 cut(s) 1083, 1232, 1397
NciI CCSGG 2 cut(s) 564, 565
NdeI CATATG 1 cut(s) 874
NdeII GATC 6 cut(s) 10, 304, 527, 574, 1060, 1442
NlaIII CATG 3 cut(s) 40, 502, 859
NlaIV GGNNCC 1 cut(s) 1107
NmeAIII GCCGAG 1 cut(s) 1252
NmuCI GTSAC 2 cut(s) 457, 1125
NsiI ATGCAT 1 cut(s) 857
NspV TTCGAA 1 cut(s) 1056
PaeR7I CTCGAG 1 cut(s) 1047
PauI GCGCGC 1 cut(s) 1539
PceI AGGCCT 1 cut(s) 997
PdmI GAANNNNTTC 1 cut(s) 1479
PfeI GAWTC 3 cut(s) 325, 635, 884
PkrI GCNGC 9 cut(s) 239, 316, 347, 380, 493, 603, 622, 1225, 1414
PleI GAGTC 1 cut(s) 863
PpsI GAGTC 1 cut(s) 863
Psp124BI GAGCTC 1 cut(s) 443
PspN4I GGNNCC 1 cut(s) 1107
PspPI GGNCC 3 cut(s) 768, 776, 1215
PspXI VCTCGAGB 1 cut(s) 1047
PstI CTGCAG 2 cut(s) 239, 1555
PstNI CAGNNNCTG 1 cut(s) 449
PsuI RGATCY 2 cut(s) 304, 1442
PteI GCGCGC 1 cut(s) 1539
PvuII CAGCTG 1 cut(s) 601
SacI GAGCTC 1 cut(s) 443
SaqAI TTAA 4 cut(s) 513, 824, 1239, 1395
SatI GCNGC 9 cut(s) 238, 315, 346, 379, 492, 602, 621, 1224, 1413
Sau3AI GATC 6 cut(s) 10, 304, 527, 574, 1060, 1442
Sau96I GGNCC 3 cut(s) 768, 776, 1215
SchI GAGTC 1 cut(s) 863
ScrFI CCNGG 2 cut(s) 564, 565
SduI GDGCHC 4 cut(s) 275, 443, 1098, 1108
SfaNI GCATC 4 cut(s) 18, 613, 784, 1239
SfcI CTRYAG 2 cut(s) 235, 1551
Sfr274I CTCGAG 1 cut(s) 1047
SfuI TTCGAA 1 cut(s) 1056
SinI GGWCC 2 cut(s) 768, 776
SlaI CTCGAG 1 cut(s) 1047
SmaI CCCGGG 1 cut(s) 565
SmlI CTYRAG 2 cut(s) 800, 1047
SmoI CTYRAG 2 cut(s) 800, 1047
SseBI AGGCCT 1 cut(s) 997
SsiI CCGC 3 cut(s) 346, 379, 383
SspMI CTAG 1 cut(s) 74
SstI GAGCTC 1 cut(s) 443
StuI AGGCCT 1 cut(s) 997
StyD4I CCNGG 2 cut(s) 562, 563
StyI CCWWGG 2 cut(s) 1192, 1218
TaaI ACNGT 3 cut(s) 322, 451, 1113
TaiI ACGT 2 cut(s) 459, 1524
TaqI TCGA 4 cut(s) 366, 1048, 1056, 1063
TauI GCSGC 2 cut(s) 348, 381
TfiI GAWTC 3 cut(s) 325, 635, 884
Tru1I TTAA 4 cut(s) 513, 824, 1239, 1395
Tru9I TTAA 4 cut(s) 513, 824, 1239, 1395
TscAI CASTG 7 cut(s) 271, 327, 454, 493, 931, 1179, 1555
TseFI GTSAC 2 cut(s) 457, 1125
TseI GCWGC 7 cut(s) 237, 314, 491, 601, 620, 1223, 1412
Tsp45I GTSAC 2 cut(s) 457, 1125
TspDTI ATGAA 4 cut(s) 159, 487, 578, 1031
TspGWI ACGGA 1 cut(s) 877
TspMI CCCGGG 1 cut(s) 563
TspRI CASTG 7 cut(s) 271, 327, 454, 493, 931, 1179, 1555
VneI GTGCAC 1 cut(s) 1094
VpaK11BI GGWCC 2 cut(s) 768, 776
XapI RAATTY 5 cut(s) 280, 647, 1025, 1168, 1433
XhoI CTCGAG 1 cut(s) 1047
XmaI CCCGGG 1 cut(s) 563
XmnI GAANNNNTTC 1 cut(s) 1479
XspI CTAG 1 cut(s) 74
Zsp2I ATGCAT 1 cut(s) 857
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.