pycom04g02810

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
OG0001515
Physical Location & Seq
Forward (+)
2584469 .. 2585661
1193 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g02810.2

Sequence Viewer

Length: 1086 bp
ATGGGATTTGAGAAAGAGCATATAGTAATGCTGCCATTCATGGCTCAAGGCCACATCATACCATTCCTATCACTCGCGAAGCACATCCAACAGTCAACAAACTTCTCAATCACCATCGCCACCACCCCTCTCAACATCAAATCCCTCCAATCCACCATTTCCTCCGCCTCATCCAATCACAACAACATCCACTTGGCCGAACTTCCGTTCTGCAGCTCAGACCACGACCTCCCCCCTAACACAGAAACCACAGAGAACCTCCCCCTCTCCAAAATGATCAACCTTTTAGCCGCCTCACTCAACCTCGAACCTCCTGCTCGCCCCTACACATCAGTCTGGCTCAGCCTCCCTCACCGCTCCGCAAGCAACGAATACTTCACCATCCCCGGCTTCCCGGAACACTGCAGGTTCCACATCTCTCAGCTGAGTTCGTTTGTAAGAGCTGCAGACGGTACAGACTCTTGGTCAAGATTTTTCCAGTCCCAGATTTCTCTTTCTAAAAAATCTTTTGGTTGGCTGTGTAATACCGTGGAGGAAATTGAGCCGTTGGGATTGGATATCTTGAGGGATAGCTTGAAGCTTCATGTTTGGTGCGTTGGTCCTCTAATTCCTGCTGATGCACTAAAAAACTCATCCACATCGGACTTAAAGGTCTCGAGGCAGCGCGCGGGGAAAGAACTGGGCTTTTCCGCAAAGAAATGCCTCGAGTGGCTTGACTCGCAAGGTTCGAGTTCTGTCATTTACATCTCATTTGGTTCTCAGAACACTATCAGTGCAACCCAAATGATGGAATTGGCTGTTGGGTTGGAAGAAAGCGGCAAGCCTTTCGTTTGGGTGATAAGGCCTCCGGTGGGGTTTGATCTAAAGGGTGAGTTCAGAGCAGAGTGGCTGCCGCACGGGTTTGAGGAAATAATGAGTAAACGAAAACAGGGGTTGCTAGTGCACAACTGGGCACCCCAGTTGGAGATTTTGTCACAAATCCACAGGGGTTTTTGTGAGCCATTGCGGGTGGAATTCAGTGATGGAGAGCTTGAGCCAGGGCGTGCCGATTGTGGGGTGGCCGTTGGCGGCGGAGCAGGCTTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046527 GO:0080043 GO:0080044
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

362

Amino Acids

39.91

Weight (kDa)

6.01

Isoelectric Point (pI)

55.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1084
AasI GACNNNNNNGTC 1 cut(s) 650
Acc36I ACCTGC 1 cut(s) 396
AccB1I GGYRCC 1 cut(s) 952
AccB7I CCANNNNNTGG 1 cut(s) 787
AccBSI CCGCTC 1 cut(s) 357
AccII CGCG 3 cut(s) 77, 666, 668
AcoI YGGCCR 2 cut(s) 195, 1059
AcsI RAATTY 1 cut(s) 1013
AfaI GTAC 1 cut(s) 454
AfiI CCNNNNNNNGG 3 cut(s) 787, 851, 1053
AgsI TTSAA 1 cut(s) 577
AhdI GACNNNNNGTC 1 cut(s) 463
AjnI CCWGG 1 cut(s) 1036
AjuI GAANNNNNNNTTGG 2 cut(s) 783, 815
AluBI AGCT 6 cut(s) 216, 424, 443, 573, 580, 1030
AluI AGCT 6 cut(s) 216, 424, 443, 573, 580, 1030
Alw21I GWGCWC 1 cut(s) 945
Alw26I GTCTC 1 cut(s) 658
Alw44I GTGCAC 1 cut(s) 941
Ama87I CYCGRG 2 cut(s) 655, 704
AoxI GGCC 4 cut(s) 49, 195, 842, 1059
ApaLI GTGCAC 1 cut(s) 941
ApeKI GCWGC 5 cut(s) 31, 213, 443, 661, 889
ApoI RAATTY 1 cut(s) 1013
AspLEI GCGC 2 cut(s) 666, 668
AspS9I GGNCC 1 cut(s) 599
AsuC2I CCSGG 2 cut(s) 387, 395
AsuHPI GGTGA 5 cut(s) 103, 344, 370, 847, 881
AvaI CYCGRG 2 cut(s) 655, 704
AvaII GGWCC 1 cut(s) 599
BaeGI GKGCMC 2 cut(s) 945, 955
BanI GGYRCC 1 cut(s) 952
Bbv12I GWGCWC 1 cut(s) 945
BbvI GCAGC 5 cut(s) 18, 225, 430, 673, 876
BccI CCATC 4 cut(s) 122, 389, 781, 1016
BceAI ACGGC 2 cut(s) 529, 1046
BcgI CGANNNNNNTGC 4 cut(s) 296, 330, 808, 842
BciT130I CCWGG 1 cut(s) 1038
BclI TGATCA 1 cut(s) 276
BcnI CCSGG 2 cut(s) 387, 395
BcoDI GTCTC 1 cut(s) 658
BfaI CTAG 1 cut(s) 938
BfmI CTRYAG 3 cut(s) 211, 403, 444
BfuAI ACCTGC 1 cut(s) 396
BisI GCNGC 9 cut(s) 32, 214, 291, 444, 662, 817, 890, 893, 1069
BlpI GCTNAGC 1 cut(s) 341
BlsI GCNGC 9 cut(s) 33, 215, 292, 445, 663, 818, 891, 894, 1070
Bme1390I CCNGG 3 cut(s) 387, 395, 1038
Bme18I GGWCC 1 cut(s) 599
BmeRI GACNNNNNGTC 1 cut(s) 463
BmeT110I CYCGRG 2 cut(s) 655, 704
BmgT120I GGNCC 1 cut(s) 599
BmiI GGNNCC 2 cut(s) 410, 954
BmrFI CCNGG 3 cut(s) 387, 395, 1038
BmrI ACTGGG 3 cut(s) 689, 952, 958
BmsI GCATC 1 cut(s) 607
BmuI ACTGGG 3 cut(s) 689, 952, 958
Bpu1102I GCTNAGC 1 cut(s) 341
BpuEI CTTGAG 3 cut(s) 30, 583, 1052
BpuMI CCSGG 2 cut(s) 387, 395
BsaI GGTCTC 1 cut(s) 658
BsaJI CCNNGG 3 cut(s) 385, 528, 1037
BsaWI WCCGGW 1 cut(s) 847
BsaXI ACNNNNNCTCC 2 cut(s) 956, 986
Bsc4I CCNNNNNNNGG 3 cut(s) 787, 851, 1053
Bse1I ACTGG 4 cut(s) 478, 684, 953, 958
Bse3DI GCAATG 1 cut(s) 1001
BseBI CCWGG 1 cut(s) 1038
BseDI CCNNGG 3 cut(s) 385, 528, 1037
BseGI GGATG 5 cut(s) 84, 170, 186, 381, 632
BseLI CCNNNNNNNGG 3 cut(s) 787, 851, 1053
BseMI GCAATG 1 cut(s) 1001
BseMII CTCAG 5 cut(s) 231, 355, 416, 434, 773
BseNI ACTGG 4 cut(s) 478, 684, 953, 958
BsePI GCGCGC 1 cut(s) 664
BseSI GKGCMC 2 cut(s) 945, 955
BseXI GCAGC 5 cut(s) 18, 225, 430, 673, 876
Bsh1236I CGCG 3 cut(s) 77, 666, 668
BshFI GGCC 4 cut(s) 51, 197, 844, 1061
BshNI GGYRCC 1 cut(s) 952
BsiHKAI GWGCWC 1 cut(s) 945
BsiHKCI CYCGRG 2 cut(s) 655, 704
BsiSI CCGG 3 cut(s) 387, 395, 848
BslFI GGGAC 1 cut(s) 466
BslI CCNNNNNNNGG 3 cut(s) 787, 851, 1053
BsmAI GTCTC 1 cut(s) 658
BsmFI GGGAC 1 cut(s) 466
BsnI GGCC 4 cut(s) 51, 197, 844, 1061
Bso31I GGTCTC 1 cut(s) 658
BsoBI CYCGRG 2 cut(s) 655, 704
Bsp1286I GDGCHC 2 cut(s) 945, 955
Bsp143I GATC 2 cut(s) 276, 859
Bsp1720I GCTNAGC 1 cut(s) 341
Bsp68I TCGCGA 1 cut(s) 77
BspANI GGCC 4 cut(s) 51, 197, 844, 1061
BspCNI CTCAG 5 cut(s) 230, 354, 417, 433, 772
BspFNI CGCG 3 cut(s) 77, 666, 668
BspLI GGNNCC 2 cut(s) 410, 954
BspMAI CTGCAG 3 cut(s) 215, 407, 448
BspMI ACCTGC 1 cut(s) 396
BspT107I GGYRCC 1 cut(s) 952
BspTNI GGTCTC 1 cut(s) 658
BsrBI CCGCTC 1 cut(s) 357
BsrDI GCAATG 1 cut(s) 1001
BsrI ACTGG 4 cut(s) 478, 684, 953, 958
BssECI CCNNGG 3 cut(s) 385, 528, 1037
BssHII GCGCGC 1 cut(s) 664
BssMI GATC 2 cut(s) 276, 859
Bst2UI CCWGG 1 cut(s) 1038
Bst4CI ACNGT 3 cut(s) 93, 452, 529
BstC8I GCNNGC 6 cut(s) 319, 364, 666, 821, 1044, 1078
BstDEI CTNAG 5 cut(s) 217, 341, 420, 425, 759
BstDSI CCRYGG 1 cut(s) 528
BstF5I GGATG 5 cut(s) 84, 170, 186, 381, 632
BstFNI CGCG 3 cut(s) 77, 666, 668
BstHHI GCGC 2 cut(s) 666, 668
BstKTI GATC 2 cut(s) 279, 862
BstMAI GTCTC 1 cut(s) 658
BstMBI GATC 2 cut(s) 276, 859
BstMWI GCNNNNNNNGC 3 cut(s) 363, 718, 1077
BstNI CCWGG 1 cut(s) 1038
BstSCI CCNGG 3 cut(s) 385, 393, 1036
BstSFI CTRYAG 3 cut(s) 211, 403, 444
BstSLI GKGCMC 2 cut(s) 945, 955
BstUI CGCG 3 cut(s) 77, 666, 668
BstV1I GCAGC 5 cut(s) 18, 225, 430, 673, 876
BsuRI GGCC 4 cut(s) 51, 197, 844, 1061
BtgI CCRYGG 1 cut(s) 528
BtgZI GCGATG 1 cut(s) 100
BtsCI GGATG 5 cut(s) 84, 170, 186, 381, 632
BtsI GCAGTG 1 cut(s) 400
BtsIMutI CAGTG 3 cut(s) 400, 778, 1024
BtuMI TCGCGA 1 cut(s) 77
BveI ACCTGC 1 cut(s) 396
Cac8I GCNNGC 6 cut(s) 319, 364, 666, 821, 1044, 1078
CfoI GCGC 2 cut(s) 666, 668
Cfr13I GGNCC 1 cut(s) 599
Csp6I GTAC 1 cut(s) 453
CviAII CATG 2 cut(s) 40, 584
CviQI GTAC 1 cut(s) 453
DdeI CTNAG 5 cut(s) 217, 341, 420, 425, 759
DpnI GATC 2 cut(s) 278, 861
DpnII GATC 2 cut(s) 276, 859
DrdI GACNNNNNNGTC 1 cut(s) 650
DriI GACNNNNNGTC 1 cut(s) 463
DseDI GACNNNNNNGTC 1 cut(s) 650
EaeI YGGCCR 2 cut(s) 195, 1059
Eam1105I GACNNNNNGTC 1 cut(s) 463
EciI GGCGGA 2 cut(s) 154, 1086
Eco147I AGGCCT 1 cut(s) 844
Eco31I GGTCTC 1 cut(s) 658
Eco32I GATATC 1 cut(s) 559
Eco47I GGWCC 1 cut(s) 599
Eco88I CYCGRG 2 cut(s) 655, 704
EcoRI GAATTC 1 cut(s) 1013
EcoRII CCWGG 1 cut(s) 1036
EcoRV GATATC 1 cut(s) 559
FaeI CATG 2 cut(s) 43, 587
FaiI YATR 6 cut(s) 21, 23, 41, 59, 585, 1084
FaqI GGGAC 1 cut(s) 466
FatI CATG 2 cut(s) 39, 583
FauI CCCGC 2 cut(s) 661, 999
FbaI TGATCA 1 cut(s) 276
Fnu4HI GCNGC 9 cut(s) 32, 214, 291, 444, 662, 817, 890, 893, 1069
FokI GGATG 5 cut(s) 71, 157, 173, 368, 619
Fsp4HI GCNGC 9 cut(s) 32, 214, 291, 444, 662, 817, 890, 893, 1069
FspBI CTAG 1 cut(s) 938
GlaI GCGC 2 cut(s) 665, 667
GluI GCNGC 9 cut(s) 32, 214, 291, 444, 662, 817, 890, 893, 1069
HaeIII GGCC 4 cut(s) 51, 197, 844, 1061
HapII CCGG 3 cut(s) 387, 395, 848
HhaI GCGC 2 cut(s) 666, 668
Hin1II CATG 2 cut(s) 43, 587
Hin6I GCGC 2 cut(s) 664, 666
HinP1I GCGC 2 cut(s) 664, 666
HincII GTYRAC 1 cut(s) 96
HindII GTYRAC 1 cut(s) 96
HindIII AAGCTT 1 cut(s) 578
HinfI GANTC 2 cut(s) 458, 716
HpaII CCGG 3 cut(s) 387, 395, 848
HphI GGTGA 5 cut(s) 103, 344, 370, 847, 881
Hpy166II GTNNAC 3 cut(s) 96, 920, 943
Hpy188I TCNGA 4 cut(s) 220, 643, 762, 878
Hpy188III TCNNGA 4 cut(s) 76, 468, 562, 655
Hpy8I GTNNAC 3 cut(s) 96, 920, 943
HpyCH4III ACNGT 3 cut(s) 93, 452, 529
HpyCH4V TGCA 6 cut(s) 213, 405, 446, 620, 776, 943
HpyF10VI GCNNNNNNNGC 3 cut(s) 363, 718, 1077
HpyF3I CTNAG 5 cut(s) 217, 341, 420, 425, 759
Hsp92II CATG 2 cut(s) 43, 587
HspAI GCGC 2 cut(s) 664, 666
Ksp22I TGATCA 1 cut(s) 276
Kzo9I GATC 2 cut(s) 276, 859
LmnI GCTCC 2 cut(s) 362, 1073
Lsp1109I GCAGC 5 cut(s) 18, 225, 430, 673, 876
LweI GCATC 1 cut(s) 607
MaeI CTAG 1 cut(s) 938
MaeIII GTNAC 1 cut(s) 972
MalI GATC 2 cut(s) 278, 861
MbiI CCGCTC 1 cut(s) 357
MboI GATC 2 cut(s) 276, 859
MboII GAAGA 1 cut(s) 821
MhlI GDGCHC 2 cut(s) 945, 955
MluCI AATT 4 cut(s) 537, 606, 791, 1013
MlyI GAGTC 2 cut(s) 452, 710
MmeI TCCRAC 3 cut(s) 112, 786, 942
MseI TTAA 1 cut(s) 647
MspA1I CMGCKG 1 cut(s) 424
MspI CCGG 3 cut(s) 387, 395, 848
MspR9I CCNGG 3 cut(s) 387, 395, 1038
MvaI CCWGG 1 cut(s) 1038
MvnI CGCG 3 cut(s) 77, 666, 668
MwoI GCNNNNNNNGC 3 cut(s) 363, 718, 1077
NciI CCSGG 2 cut(s) 387, 395
NdeII GATC 2 cut(s) 276, 859
NlaIII CATG 2 cut(s) 43, 587
NlaIV GGNNCC 2 cut(s) 410, 954
NmuCI GTSAC 1 cut(s) 972
NruI TCGCGA 1 cut(s) 77
PaeR7I CTCGAG 2 cut(s) 655, 704
PauI GCGCGC 1 cut(s) 664
PceI AGGCCT 1 cut(s) 844
PcsI WCGNNNNNNNCGW 1 cut(s) 725
PflMI CCANNNNNTGG 1 cut(s) 787
PfoI TCCNGGA 1 cut(s) 393
PkrI GCNGC 9 cut(s) 33, 215, 292, 445, 663, 818, 891, 894, 1070
PleI GAGTC 2 cut(s) 452, 710
PpsI GAGTC 2 cut(s) 452, 710
PsiI TTATAA 1 cut(s) 1084
Psp6I CCWGG 1 cut(s) 1036
PspGI CCWGG 1 cut(s) 1036
PspN4I GGNNCC 2 cut(s) 410, 954
PspPI GGNCC 1 cut(s) 599
PspXI VCTCGAGB 1 cut(s) 704
PstI CTGCAG 3 cut(s) 215, 407, 448
PteI GCGCGC 1 cut(s) 664
PvuII CAGCTG 1 cut(s) 424
RruI TCGCGA 1 cut(s) 77
RsaI GTAC 1 cut(s) 454
RsaNI GTAC 1 cut(s) 453
SaqAI TTAA 1 cut(s) 647
SatI GCNGC 9 cut(s) 32, 214, 291, 444, 662, 817, 890, 893, 1069
Sau3AI GATC 2 cut(s) 276, 859
Sau96I GGNCC 1 cut(s) 599
SchI GAGTC 2 cut(s) 452, 710
ScrFI CCNGG 3 cut(s) 387, 395, 1038
SduI GDGCHC 2 cut(s) 945, 955
SfaNI GCATC 1 cut(s) 607
SfcI CTRYAG 3 cut(s) 211, 403, 444
Sfr274I CTCGAG 2 cut(s) 655, 704
SinI GGWCC 1 cut(s) 599
SlaI CTCGAG 2 cut(s) 655, 704
SmlI CTYRAG 5 cut(s) 45, 562, 655, 704, 1031
SmoI CTYRAG 5 cut(s) 45, 562, 655, 704, 1031
Sse9I AATT 4 cut(s) 537, 606, 791, 1013
SseBI AGGCCT 1 cut(s) 844
SspMI CTAG 1 cut(s) 938
StuI AGGCCT 1 cut(s) 844
StyD4I CCNGG 3 cut(s) 385, 393, 1036
TaaI ACNGT 3 cut(s) 93, 452, 529
TaqI TCGA 4 cut(s) 306, 656, 705, 728
TasI AATT 4 cut(s) 537, 606, 791, 1013
TauI GCSGC 4 cut(s) 293, 819, 895, 1071
Tru1I TTAA 1 cut(s) 647
Tru9I TTAA 1 cut(s) 647
TscAI CASTG 3 cut(s) 407, 778, 1024
TseFI GTSAC 1 cut(s) 972
TseI GCWGC 5 cut(s) 31, 213, 443, 661, 889
Tsp45I GTSAC 1 cut(s) 972
TspDTI ATGAA 2 cut(s) 28, 572
TspGWI ACGGA 1 cut(s) 195
TspRI CASTG 3 cut(s) 407, 778, 1024
Van91I CCANNNNNTGG 1 cut(s) 787
VneI GTGCAC 1 cut(s) 941
VpaK11BI GGWCC 1 cut(s) 599
XapI RAATTY 1 cut(s) 1013
XhoI CTCGAG 2 cut(s) 655, 704
XspI CTAG 1 cut(s) 938
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.