Rh4CG163000

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
Physical Location & Seq
Forward (+)
35848369 .. 35848719
351 bp
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UTR
Exon/CDS
Intron
Rh4CG163000.1

Sequence Viewer

Length: 351 bp
ATGAGCATCTACTCTTACAAGCATTCCAAAAGCATATATAGCCAGTCCATTCATACAGTAATCCCAAAAGCAAAAAATCAAAGAATTTCAGAGATGGGTTGTGATAAGGAACACATGGTGATGCTACCATTCTTGGCTCAAGGCCATCTGATTCCGTTCCTAGCCCTAGCCAAGCAAATCCAGCACAGAACAGGGTTCACCATCACATCGCCACCACCGCCCTCAACGCCCATTACCTTCGGTCTGCTCAACCCAACACCAACATCCACTTGGCCGAGCTTCCCTTCCGCAGCGAAGACTATGGCCTCCCGCCCAACACAGAGAACACAGAGAACATACCTCTCAACGTAG
Functional Annotation

Protein Analysis

116

Amino Acids

12.96

Weight (kDa)

10.24

Isoelectric Point (pI)

44.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 218, 288, 310
AcoI YGGCCR 1 cut(s) 272
AcsI RAATTY 1 cut(s) 84
AdeI CACNNNGTG 1 cut(s) 118
AluBI AGCT 1 cut(s) 279
AluI AGCT 1 cut(s) 279
AoxI GGCC 3 cut(s) 142, 272, 303
ApeKI GCWGC 1 cut(s) 290
ApoI RAATTY 1 cut(s) 84
AsuHPI GGTGA 2 cut(s) 130, 190
BbsI GAAGAC 1 cut(s) 302
BbvI GCAGC 1 cut(s) 302
BccI CCATC 3 cut(s) 88, 153, 209
BfaI CTAG 2 cut(s) 161, 167
BisI GCNGC 1 cut(s) 291
BlsI GCNGC 1 cut(s) 292
BmsI GCATC 2 cut(s) 15, 111
BpiI GAAGAC 1 cut(s) 302
BpuEI CTTGAG 1 cut(s) 123
Bse1I ACTGG 1 cut(s) 43
BseGI GGATG 1 cut(s) 263
BseNI ACTGG 1 cut(s) 43
BseXI GCAGC 1 cut(s) 302
BshFI GGCC 3 cut(s) 144, 274, 305
BsmI GAATGC 1 cut(s) 22
BsnI GGCC 3 cut(s) 144, 274, 305
BspACI CCGC 3 cut(s) 218, 288, 310
BspANI GGCC 3 cut(s) 144, 274, 305
BsrI ACTGG 1 cut(s) 43
Bst4CI ACNGT 1 cut(s) 58
BstF5I GGATG 1 cut(s) 263
BstMWI GCNNNNNNNGC 4 cut(s) 39, 181, 217, 226
BstV1I GCAGC 1 cut(s) 302
BstV2I GAAGAC 1 cut(s) 302
BsuRI GGCC 3 cut(s) 144, 274, 305
BtgZI GCGATG 1 cut(s) 192
BtsCI GGATG 1 cut(s) 263
CviAII CATG 1 cut(s) 115
CviJI RGCY 8 cut(s) 42, 137, 144, 164, 170, 274, 279, 305
CviKI_1 RGCY 8 cut(s) 42, 137, 144, 164, 170, 274, 279, 305
DraIII CACNNNGTG 1 cut(s) 118
EaeI YGGCCR 1 cut(s) 272
FaeI CATG 1 cut(s) 118
FaiI YATR 7 cut(s) 35, 37, 39, 54, 116, 302, 337
FatI CATG 1 cut(s) 114
FauI CCCGC 1 cut(s) 317
Fnu4HI GCNGC 1 cut(s) 291
FokI GGATG 1 cut(s) 250
Fsp4HI GCNGC 1 cut(s) 291
FspBI CTAG 2 cut(s) 161, 167
GluI GCNGC 1 cut(s) 291
HaeIII GGCC 3 cut(s) 144, 274, 305
Hin1II CATG 1 cut(s) 118
HinfI GANTC 1 cut(s) 151
HphI GGTGA 2 cut(s) 130, 190
Hpy166II GTNNAC 1 cut(s) 198
Hpy188I TCNGA 2 cut(s) 91, 150
Hpy8I GTNNAC 1 cut(s) 198
HpyAV CCTTC 2 cut(s) 247, 294
HpyCH4III ACNGT 1 cut(s) 58
HpyCH4IV ACGT 1 cut(s) 347
HpyF10VI GCNNNNNNNGC 4 cut(s) 39, 181, 217, 226
HpySE526I ACGT 1 cut(s) 347
Hsp92II CATG 1 cut(s) 118
LpnPI CCDG 3 cut(s) 56, 177, 194
Lsp1109I GCAGC 1 cut(s) 302
LweI GCATC 2 cut(s) 15, 111
MaeI CTAG 2 cut(s) 161, 167
MaeII ACGT 1 cut(s) 347
MboII GAAGA 1 cut(s) 307
MluCI AATT 1 cut(s) 84
MnlI CCTC 3 cut(s) 232, 316, 350
MslI CAYNNNNRTG 1 cut(s) 119
Mva1269I GAATGC 1 cut(s) 22
MwoI GCNNNNNNNGC 4 cut(s) 39, 181, 217, 226
NlaIII CATG 1 cut(s) 118
NmeAIII GCCGAG 1 cut(s) 300
PctI GAATGC 1 cut(s) 22
PfeI GAWTC 1 cut(s) 151
PkrI GCNGC 1 cut(s) 292
RseI CAYNNNNRTG 1 cut(s) 119
SatI GCNGC 1 cut(s) 291
SetI ASST 4 cut(s) 239, 281, 342, 350
SfaNI GCATC 2 cut(s) 15, 111
SmiMI CAYNNNNRTG 1 cut(s) 119
SmlI CTYRAG 1 cut(s) 138
SmoI CTYRAG 1 cut(s) 138
Sse9I AATT 1 cut(s) 84
SsiI CCGC 3 cut(s) 218, 288, 310
SspMI CTAG 2 cut(s) 161, 167
TaaI ACNGT 1 cut(s) 58
TaiI ACGT 1 cut(s) 350
TaqII GACCGA 1 cut(s) 230
TasI AATT 1 cut(s) 84
TfiI GAWTC 1 cut(s) 151
TseI GCWGC 1 cut(s) 290
TspDTI ATGAA 1 cut(s) 41
TspGWI ACGGA 1 cut(s) 144
XapI RAATTY 1 cut(s) 84
XcmI CCANNNNNNNNNTGG 1 cut(s) 267
XspI CTAG 2 cut(s) 161, 167
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.