Prupe.1G179700_v2.0.a1

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0001515
Physical Location & Seq
Forward (+)
15531797 .. 15533902
2106 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G179700.1

Sequence Viewer

Length: 1503 bp
ATGGAAGGCCAAGAGCACATTGTGATGCTGCCATTTATGGCTCAAGGCCATCTCATACCATTCCTTGCACTGGCAAGGAAAATCCAACAAAGAACAGGATTCACAATCACCATTGCCAGCACCACCCTCAACATCCAATACCTCAGTGCAACCATTGCCTCAACCTCAAACTCTCAATCGGACTCCAACATCCATTTGGCTGAGCTTTCATTCTGCAGTACAGACTATGGCTTGCCCCCGAACGCCGAGAGCACGGAGGACTTGCCTCTAAGCAAAATAGGAGATTTTGTTGCTGCATCAACAAGTCTTGAAGCTCCTGCTCACCGCCTAATCTTGGATATCATCGCAAAAGAAGGCCGCCCACCACTTTGTATTGTCTCTGATATGTATTTTGGATGGGCAGCTAATCTTGCAAATAACTTGAGCACTGTGCATGTGACTTTCACTACAGGTGGTGCCTATGGCTCTGCAGCCTTGGTGTCTATTTGGCTTAGCCTCCCACACCGTTGTACAGCTTCAGATGAGTTCCCAGTGCCGGGGTTTCCAGAGAGTTATCGTTTTCATATCTCTCAGTTGAATCCATATTTAAAAGCTGCAGATGGTAAAGATTCTGGCTCTAGGATTTTTCAGCCCCAGATTTCACTTTCTACGAAATCTTTTGGTTGGCTGTGTAGTACTGTTGAGGCAATTGAGCCCTTTGGATTGGAGATCTTGAGGAATTACTTGAGGCTTCCTGTTTGGTCCATTGGACCTCTTCTTCCTACAGATGCACTAAAGAACTCATCGACTTTGGATTCAAGTGTTTCAAGGCAACGTGCAGGAAAAGAGTTGGGCATACCTGCTGAAACATGCCTTAAATGGCTCGATTCGCATGGTTCGGATTCTGTTATCTACATCTCATTTGGTTCCCAGAACACTATCAGCGCCACCCAAATGATGGAGCTGGCTATTGCTTTAGAAGAAAGTGGAAGGCCTTTTATTTGGGTCATAAGACCTCCTGTGGGATATGACATGAAGGGAGAGTTCAGGGTAGAGTGGTTGCCCCAAGGATTCGAAGATCGAATGAGCAAAAGAAAACAAGGGTTGTTGGTGCACAACTGGGCACCGCAGTTGGAGATTTTGTCACACAAGTCCACAAGTGTGTTTGTTAGCCATTGTGGATGGAATTCAGTGATGGAGAGCTTAAGCCAGGGCGTGCCAATTATAGGGTGGCCATTGGGAGCAGAGCAGGCATTTAATTCAAAGATGTTGGTGGAGGAGATGGGTGTGAGTGTGGAGCTGACAAGGGGAGGGCAGAGTGATATTGCTCGGAAGGAGGTGAAGAGACTGATAGAATTGGTAATGGACAAAAGTGGCAAAGGAGGAGAAATGAGGGAAAAGGCTTGTGAAATTAAGGAGCAGATAAGAGCAGCAATAAGAGAGGAGGCTGAAGACAAGGGATCTTTTGTTAAGGCAATGGATGATTTTGTTGCTACCATTCTATCAACCAGACAAGGATTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046527 GO:0080043 GO:0080044
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

501

Amino Acids

54.95

Weight (kDa)

5.65

Isoelectric Point (pI)

48.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1501
Acc36I ACCTGC 1 cut(s) 847
AccB1I GGYRCC 2 cut(s) 455, 1102
AccB7I CCANNNNNTGG 1 cut(s) 937
AciI CCGC 3 cut(s) 325, 358, 1106
AclWI GGATC 1 cut(s) 1447
AcoI YGGCCR 1 cut(s) 1211
AcsI RAATTY 1 cut(s) 1165
AcuI CTGAAG 2 cut(s) 501, 1449
AdeI CACNNNGTG 1 cut(s) 22
AfaI GTAC 3 cut(s) 220, 511, 676
AfiI CCNNNNNNNGG 7 cut(s) 70, 334, 535, 536, 937, 1001, 1205
AflII CTTAAG 1 cut(s) 1183
AgsI TTSAA 5 cut(s) 311, 577, 798, 807, 1242
AjnI CCWGG 1 cut(s) 1188
AleI CACNNNNGTG 1 cut(s) 1139
AluBI AGCT 8 cut(s) 205, 314, 404, 515, 593, 943, 1182, 1279
AluI AGCT 8 cut(s) 205, 314, 404, 515, 593, 943, 1182, 1279
Alw21I GWGCWC 4 cut(s) 18, 254, 428, 1095
Alw26I GTCTC 2 cut(s) 382, 1318
Alw44I GTGCAC 1 cut(s) 1091
AlwI GGATC 1 cut(s) 1447
AoxI GGCC 5 cut(s) 7, 46, 355, 971, 1211
ApaLI GTGCAC 1 cut(s) 1091
ApeKI GCWGC 6 cut(s) 28, 293, 401, 470, 593, 1409
ApoI RAATTY 1 cut(s) 1165
AspLEI GCGC 1 cut(s) 926
AspS9I GGNCC 2 cut(s) 741, 749
AsuC2I CCSGG 1 cut(s) 537
AsuHPI GGTGA 3 cut(s) 100, 314, 1330
AsuII TTCGAA 1 cut(s) 1053
AvaII GGWCC 2 cut(s) 741, 749
BaeGI GKGCMC 2 cut(s) 1095, 1105
BalI TGGCCA 1 cut(s) 1213
BanI GGYRCC 2 cut(s) 455, 1102
BanII GRGCYC 1 cut(s) 696
BbsI GAAGAC 1 cut(s) 1437
Bbv12I GWGCWC 4 cut(s) 18, 254, 428, 1095
BbvI GCAGC 6 cut(s) 15, 280, 413, 482, 580, 1421
BccI CCATC 7 cut(s) 57, 390, 593, 931, 1155, 1168, 1255
BciT130I CCWGG 1 cut(s) 1190
BcnI CCSGG 1 cut(s) 537
BcoDI GTCTC 2 cut(s) 382, 1318
BfaI CTAG 1 cut(s) 618
BfmI CTRYAG 5 cut(s) 214, 447, 468, 594, 762
BfoI RGCGCY 1 cut(s) 927
BfrI CTTAAG 1 cut(s) 1183
BfuAI ACCTGC 1 cut(s) 847
BglII AGATCT 1 cut(s) 708
BisI GCNGC 7 cut(s) 29, 294, 358, 402, 471, 594, 1410
BlpI GCTNAGC 2 cut(s) 201, 491
BlsI GCNGC 7 cut(s) 30, 295, 359, 403, 472, 595, 1411
BmcAI AGTACT 1 cut(s) 676
Bme1390I CCNGG 2 cut(s) 537, 1190
Bme18I GGWCC 2 cut(s) 741, 749
BmgT120I GGNCC 2 cut(s) 741, 749
BmiI GGNNCC 3 cut(s) 457, 907, 1104
BmrFI CCNGG 2 cut(s) 537, 1190
BmrI ACTGGG 2 cut(s) 524, 1108
BmsI GCATC 3 cut(s) 15, 305, 757
BmuI ACTGGG 2 cut(s) 524, 1108
BpiI GAAGAC 1 cut(s) 1437
Bpu1102I GCTNAGC 2 cut(s) 201, 491
Bpu14I TTCGAA 1 cut(s) 1053
BpuEI CTTGAG 4 cut(s) 27, 442, 733, 745
BpuMI CCSGG 1 cut(s) 537
BsaJI CCNNGG 4 cut(s) 474, 536, 1045, 1189
BsaXI ACNNNNNCTCC 4 cut(s) 273, 303, 1106, 1136
Bsc4I CCNNNNNNNGG 7 cut(s) 70, 334, 535, 536, 937, 1001, 1205
Bse1I ACTGG 3 cut(s) 75, 530, 1103
Bse3DI GCAATG 3 cut(s) 111, 153, 1461
BseBI CCWGG 1 cut(s) 1190
BseDI CCNNGG 4 cut(s) 474, 536, 1045, 1189
BseGI GGATG 5 cut(s) 132, 189, 401, 1166, 1465
BseLI CCNNNNNNNGG 7 cut(s) 70, 334, 535, 536, 937, 1001, 1205
BseMI GCAATG 3 cut(s) 111, 153, 1461
BseMII CTCAG 3 cut(s) 157, 192, 584
BseNI ACTGG 3 cut(s) 75, 530, 1103
BseRI GAGGAG 3 cut(s) 1271, 1377, 1436
BseSI GKGCMC 2 cut(s) 1095, 1105
BseXI GCAGC 6 cut(s) 15, 280, 413, 482, 580, 1421
BsgI GTGCAG 1 cut(s) 837
BshFI GGCC 5 cut(s) 9, 48, 357, 973, 1213
BshNI GGYRCC 2 cut(s) 455, 1102
BsiHKAI GWGCWC 4 cut(s) 18, 254, 428, 1095
BsiSI CCGG 1 cut(s) 536
BslI CCNNNNNNNGG 7 cut(s) 70, 334, 535, 536, 937, 1001, 1205
BsmAI GTCTC 2 cut(s) 382, 1318
BsnI GGCC 5 cut(s) 9, 48, 357, 973, 1213
Bsp119I TTCGAA 1 cut(s) 1053
Bsp1286I GDGCHC 6 cut(s) 18, 254, 428, 696, 1095, 1105
Bsp1407I TGTACA 1 cut(s) 509
Bsp143I GATC 3 cut(s) 708, 1057, 1439
Bsp1720I GCTNAGC 2 cut(s) 201, 491
BspACI CCGC 3 cut(s) 325, 358, 1106
BspANI GGCC 5 cut(s) 9, 48, 357, 973, 1213
BspCNI CTCAG 3 cut(s) 156, 193, 583
BspLI GGNNCC 3 cut(s) 457, 907, 1104
BspMAI CTGCAG 3 cut(s) 218, 472, 598
BspMI ACCTGC 1 cut(s) 847
BspPI GGATC 1 cut(s) 1447
BspT104I TTCGAA 1 cut(s) 1053
BspT107I GGYRCC 2 cut(s) 455, 1102
BspTI CTTAAG 1 cut(s) 1183
BsrDI GCAATG 3 cut(s) 111, 153, 1461
BsrGI TGTACA 1 cut(s) 509
BsrI ACTGG 3 cut(s) 75, 530, 1103
BssECI CCNNGG 4 cut(s) 474, 536, 1045, 1189
BssMI GATC 3 cut(s) 708, 1057, 1439
BssT1I CCWWGG 2 cut(s) 474, 1045
Bst2UI CCWGG 1 cut(s) 1190
Bst4CI ACNGT 3 cut(s) 430, 506, 679
Bst6I CTCTTC 2 cut(s) 759, 1316
BstAFI CTTAAG 1 cut(s) 1183
BstAPI GCANNNNNTGC 1 cut(s) 155
BstAUI TGTACA 1 cut(s) 509
BstBI TTCGAA 1 cut(s) 1053
BstC8I GCNNGC 5 cut(s) 118, 233, 945, 1196, 1230
BstDEI CTNAG 5 cut(s) 143, 201, 269, 491, 570
BstF5I GGATG 5 cut(s) 132, 189, 401, 1166, 1465
BstH2I RGCGCY 1 cut(s) 927
BstHHI GCGC 1 cut(s) 926
BstKTI GATC 3 cut(s) 711, 1060, 1442
BstMAI GTCTC 2 cut(s) 382, 1318
BstMBI GATC 3 cut(s) 708, 1057, 1439
BstMWI GCNNNNNNNGC 4 cut(s) 155, 410, 868, 1229
BstNI CCWGG 1 cut(s) 1190
BstNSI RCATGY 2 cut(s) 437, 852
BstSCI CCNGG 2 cut(s) 535, 1188
BstSFI CTRYAG 5 cut(s) 214, 447, 468, 594, 762
BstSLI GKGCMC 2 cut(s) 1095, 1105
BstV1I GCAGC 6 cut(s) 15, 280, 413, 482, 580, 1421
BstV2I GAAGAC 1 cut(s) 1437
BstX2I RGATCY 2 cut(s) 708, 1439
BstYI RGATCY 2 cut(s) 708, 1439
BsuRI GGCC 5 cut(s) 9, 48, 357, 973, 1213
BtgZI GCGATG 1 cut(s) 328
BtsCI GGATG 5 cut(s) 132, 189, 401, 1166, 1465
BtsIMutI CAGTG 5 cut(s) 68, 151, 426, 537, 1176
BveI ACCTGC 1 cut(s) 847
Cac8I GCNNGC 5 cut(s) 118, 233, 945, 1196, 1230
CfoI GCGC 1 cut(s) 926
Cfr13I GGNCC 2 cut(s) 741, 749
Csp6I GTAC 3 cut(s) 219, 510, 675
CviAII CATG 4 cut(s) 434, 849, 872, 1012
CviQI GTAC 3 cut(s) 219, 510, 675
DdeI CTNAG 5 cut(s) 143, 201, 269, 491, 570
DpnI GATC 3 cut(s) 710, 1059, 1441
DpnII GATC 3 cut(s) 708, 1057, 1439
DraI TTTAAA 1 cut(s) 588
DraIII CACNNNGTG 1 cut(s) 22
EaeI YGGCCR 1 cut(s) 1211
Eam1104I CTCTTC 2 cut(s) 759, 1316
EarI CTCTTC 2 cut(s) 759, 1316
Eco130I CCWWGG 2 cut(s) 474, 1045
Eco147I AGGCCT 1 cut(s) 973
Eco24I GRGCYC 1 cut(s) 696
Eco32I GATATC 1 cut(s) 340
Eco47I GGWCC 2 cut(s) 741, 749
Eco57I CTGAAG 2 cut(s) 501, 1449
EcoRI GAATTC 1 cut(s) 1165
EcoRII CCWGG 1 cut(s) 1188
EcoRV GATATC 1 cut(s) 340
EcoT14I CCWWGG 2 cut(s) 474, 1045
EcoT38I GRGCYC 1 cut(s) 696
ErhI CCWWGG 2 cut(s) 474, 1045
FaeI CATG 4 cut(s) 437, 852, 875, 1015
FatI CATG 4 cut(s) 433, 848, 871, 1011
Fnu4HI GCNGC 7 cut(s) 29, 294, 358, 402, 471, 594, 1410
FokI GGATG 5 cut(s) 119, 176, 408, 1173, 1472
FriOI GRGCYC 1 cut(s) 696
Fsp4HI GCNGC 7 cut(s) 29, 294, 358, 402, 471, 594, 1410
FspBI CTAG 1 cut(s) 618
GlaI GCGC 1 cut(s) 925
GluI GCNGC 7 cut(s) 29, 294, 358, 402, 471, 594, 1410
HaeII RGCGCY 1 cut(s) 927
HaeIII GGCC 5 cut(s) 9, 48, 357, 973, 1213
HapII CCGG 1 cut(s) 536
HhaI GCGC 1 cut(s) 926
Hin1II CATG 4 cut(s) 437, 852, 875, 1015
Hin6I GCGC 1 cut(s) 924
HinP1I GCGC 1 cut(s) 924
HinfI GANTC 8 cut(s) 99, 182, 577, 608, 794, 866, 881, 1050
HpaII CCGG 1 cut(s) 536
HphI GGTGA 3 cut(s) 100, 314, 1330
Hpy166II GTNNAC 2 cut(s) 1093, 1134
Hpy188I TCNGA 5 cut(s) 181, 382, 520, 880, 1311
Hpy188III TCNNGA 3 cut(s) 308, 545, 712
Hpy8I GTNNAC 2 cut(s) 1093, 1134
HpyAV CCTTC 4 cut(s) 347, 963, 1009, 1306
HpyCH4III ACNGT 3 cut(s) 430, 506, 679
HpyCH4IV ACGT 1 cut(s) 814
HpyF10VI GCNNNNNNNGC 4 cut(s) 155, 410, 868, 1229
HpyF3I CTNAG 5 cut(s) 143, 201, 269, 491, 570
HpySE526I ACGT 1 cut(s) 814
Hsp92II CATG 4 cut(s) 437, 852, 875, 1015
HspAI GCGC 1 cut(s) 924
Kzo9I GATC 3 cut(s) 708, 1057, 1439
LmnI GCTCC 5 cut(s) 319, 940, 1220, 1276, 1396
Lsp1109I GCAGC 6 cut(s) 15, 280, 413, 482, 580, 1421
LweI GCATC 3 cut(s) 15, 305, 757
MaeI CTAG 1 cut(s) 618
MaeII ACGT 1 cut(s) 814
MaeIII GTNAC 2 cut(s) 436, 1122
MalI GATC 3 cut(s) 710, 1059, 1441
MboI GATC 3 cut(s) 708, 1057, 1439
MboII GAAGA 6 cut(s) 746, 749, 971, 1067, 1333, 1442
MfeI CAATTG 1 cut(s) 687
MflI RGATCY 2 cut(s) 708, 1439
MhlI GDGCHC 6 cut(s) 18, 254, 428, 696, 1095, 1105
MlsI TGGCCA 1 cut(s) 1213
MluCI AATT 7 cut(s) 687, 718, 1165, 1200, 1237, 1334, 1389
MluNI TGGCCA 1 cut(s) 1213
MlyI GAGTC 1 cut(s) 176
MmeI TCCRAC 3 cut(s) 109, 210, 1092
Mox20I TGGCCA 1 cut(s) 1213
MscI TGGCCA 1 cut(s) 1213
MseI TTAA 6 cut(s) 587, 855, 1184, 1236, 1392, 1449
MslI CAYNNNNRTG 3 cut(s) 23, 932, 1139
Msp20I TGGCCA 1 cut(s) 1213
MspCI CTTAAG 1 cut(s) 1183
MspI CCGG 1 cut(s) 536
MspR9I CCNGG 2 cut(s) 537, 1190
MunI CAATTG 1 cut(s) 687
MvaI CCWGG 1 cut(s) 1190
MwoI GCNNNNNNNGC 4 cut(s) 155, 410, 868, 1229
NciI CCSGG 1 cut(s) 537
NdeII GATC 3 cut(s) 708, 1057, 1439
NlaIII CATG 4 cut(s) 437, 852, 875, 1015
NlaIV GGNNCC 3 cut(s) 457, 907, 1104
NmeAIII GCCGAG 1 cut(s) 271
NmuCI GTSAC 2 cut(s) 436, 1122
NspI RCATGY 2 cut(s) 437, 852
NspV TTCGAA 1 cut(s) 1053
OliI CACNNNNGTG 1 cut(s) 1139
PceI AGGCCT 1 cut(s) 973
PfeI GAWTC 7 cut(s) 99, 577, 608, 794, 866, 881, 1050
PflMI CCANNNNNTGG 1 cut(s) 937
PkrI GCNGC 7 cut(s) 30, 295, 359, 403, 472, 595, 1411
PleI GAGTC 1 cut(s) 176
PpsI GAGTC 1 cut(s) 176
PsiI TTATAA 1 cut(s) 1501
Psp6I CCWGG 1 cut(s) 1188
PspGI CCWGG 1 cut(s) 1188
PspN4I GGNNCC 3 cut(s) 457, 907, 1104
PspPI GGNCC 2 cut(s) 741, 749
PstI CTGCAG 3 cut(s) 218, 472, 598
PsuI RGATCY 2 cut(s) 708, 1439
RsaI GTAC 3 cut(s) 220, 511, 676
RsaNI GTAC 3 cut(s) 219, 510, 675
RseI CAYNNNNRTG 3 cut(s) 23, 932, 1139
SaqAI TTAA 6 cut(s) 587, 855, 1184, 1236, 1392, 1449
SatI GCNGC 7 cut(s) 29, 294, 358, 402, 471, 594, 1410
Sau3AI GATC 3 cut(s) 708, 1057, 1439
Sau96I GGNCC 2 cut(s) 741, 749
ScaI AGTACT 1 cut(s) 676
SchI GAGTC 1 cut(s) 176
ScrFI CCNGG 2 cut(s) 537, 1190
SduI GDGCHC 6 cut(s) 18, 254, 428, 696, 1095, 1105
SfaNI GCATC 3 cut(s) 15, 305, 757
SfcI CTRYAG 5 cut(s) 214, 447, 468, 594, 762
SfuI TTCGAA 1 cut(s) 1053
SinI GGWCC 2 cut(s) 741, 749
SmiMI CAYNNNNRTG 3 cut(s) 23, 932, 1139
SmlI CTYRAG 5 cut(s) 42, 421, 712, 724, 1183
SmoI CTYRAG 5 cut(s) 42, 421, 712, 724, 1183
Sse9I AATT 7 cut(s) 687, 718, 1165, 1200, 1237, 1334, 1389
SseBI AGGCCT 1 cut(s) 973
SsiI CCGC 3 cut(s) 325, 358, 1106
SspMI CTAG 1 cut(s) 618
StuI AGGCCT 1 cut(s) 973
StyD4I CCNGG 2 cut(s) 535, 1188
StyI CCWWGG 2 cut(s) 474, 1045
TaaI ACNGT 3 cut(s) 430, 506, 679
TaiI ACGT 1 cut(s) 817
TaqI TCGA 4 cut(s) 785, 864, 1053, 1060
TasI AATT 7 cut(s) 687, 718, 1165, 1200, 1237, 1334, 1389
TatI WGTACW 3 cut(s) 218, 509, 674
TauI GCSGC 1 cut(s) 360
TfiI GAWTC 7 cut(s) 99, 577, 608, 794, 866, 881, 1050
Tru1I TTAA 6 cut(s) 587, 855, 1184, 1236, 1392, 1449
Tru9I TTAA 6 cut(s) 587, 855, 1184, 1236, 1392, 1449
TscAI CASTG 5 cut(s) 75, 151, 433, 537, 1176
TseFI GTSAC 2 cut(s) 436, 1122
TseI GCWGC 6 cut(s) 28, 293, 401, 470, 593, 1409
Tsp45I GTSAC 2 cut(s) 436, 1122
TspDTI ATGAA 3 cut(s) 198, 551, 1028
TspGWI ACGGA 1 cut(s) 269
TspRI CASTG 5 cut(s) 75, 151, 433, 537, 1176
Van91I CCANNNNNTGG 1 cut(s) 937
Vha464I CTTAAG 1 cut(s) 1183
VneI GTGCAC 1 cut(s) 1091
VpaK11BI GGWCC 2 cut(s) 741, 749
XapI RAATTY 1 cut(s) 1165
XceI RCATGY 2 cut(s) 437, 852
XcmI CCANNNNNNNNNTGG 3 cut(s) 193, 934, 1206
XspI CTAG 1 cut(s) 618
ZrmI AGTACT 1 cut(s) 676
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.