Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0001686

Physical Location & Seq

Genomic Coordinates Forward (+)

26734934 .. 26737470

Gene Structure 2537 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G257200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1053 bp

ATGGCGATGGGGATTTCTATGCCCTTTGTGGGAATGGTGATGGTGATTCTTGCTCAGGTGACTAGTTTGATACTAAACAAGGAAGCCATGGCCAGCGGACTGAGTGAATATGTTCTTGCTGTCTACTCTTTTGCTCTAGCCGCTCTCATTATTCTCCCTTTTTGCTTCTTCTTCAACAGATCAGAGCGTCCCCCACTCAGCTTCTCCATCATCTCGAGATTATTCTTACTCAGCCTTATTGGATCTTCTGGACTGTTAATGGGACTTGCTGGTTTAAACTATGCCTCTGCTACACTTAACACAGCCATGCTTAATCTCATTCCAGCCTTTACATTCATACTTGCCTTACTTTTCAGGATGGAAAAGCTAAATTGGAGGAGCTCAAGCAGCCAAGCTAAAACTATAGGAACTGTAGTGTCAATTACAGGGGCATTTGTTGTGACCTTCTACAAGGGCCCTGCAGTTATACACGCACGCTTGTCCTCTGCTGGGACTGGCCTATTCAGTAATCTATTTCTCTTCTCAGAAAAATCACATTGGGTCCTTGGAGGGCTACTTCTAGCAGCTGACTCCTTCTCGACCTCATTATGGTTTATTGTGCAGGCCTCAATTCTTAAGAAGTACCCTGCAGTGCTGATCACAGTCTTCTTTTACTGCTTCTTTGTCTGCATACAATGTGCATTAGTCTCACTGATACTTGTACAAGACCTAAGTGCTTGGAGGCTAAAACCTAATATTGGATTGCTTGCAGTTTTATACTATGGGATTGTTGGGATTTCATTTCGTACCAACATGTGTACATGGTGCCTGCAGAGAACAGGACCTGTGTATGTTTCTATGTTCAAGCCCCTTGCCGTGGTTTTCGCAGATGTCATCGATGTAATATTTCTGGGACAAGCTCTCTATCTTGGAAGCTTGATTGGAGCAGCTGTAATTATCTCTGGTCTTTATGTTGTGATATGGGGAAAGTCCAGAGAAGAGAAGTTGCATGAAAACAGTGGAGAAGGGCAGAATTGCTTAGAATCATCCACTGAAAGGGTCCCCCTGCTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005887 GO:0005938 GO:0006810 GO:0007154 GO:0007165 GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009987 GO:0010033 GO:0016020 GO:0016021 GO:0022857 GO:0023052 GO:0031224 GO:0031226 GO:0032870 GO:0042221 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071944 GO:0099568

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EamA

Protein Analysis

351

Amino Acids

38.2

Weight (kDa)

9.06

Isoelectric Point (pI)

33.03

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001686)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g34870 FvH4_4g34870 FvH4_4g34870 FvH4_4g34870 FvH4_4g34870 FvH4_4g34870 FvH4_4g34870 FvH4_4g34870
malus_domestica	MD13G1088500.v1.1 MD13G1088700.v1.1 MD16G1088800.v1.1 MD16G1088900.v1.1
prunus_persica	Prupe.1G257200_v2.0.a1 Prupe.1G257300_v2.0.a1 Prupe.1G257400_v2.0.a1 Prupe.1G257500_v2.0.a1 Prupe.1G257600_v2.0.a1 Prupe.1G257700_v2.0.a1
pyrus_communis	pycom13g07640 pycom13g07650 pycom16g07610
rosa_chinensis	RchiOBHm_Chr4g0411271 RchiOBHm_Chr4g0444271 RchiOBHm_Chr4g0444291 RchiOBHm_Chr4g0444301
rosa_laevigata	RLG00000005843
rosa_multiflora	Rmu_sc0002841.1_g000015
rosa_roxburghii	Rroxscaffold_5G00384840 Rroxscaffold_5G00384850
rosa_rugosa	Rorug03G0072000 Rorug03G0072100 Rorug04G0351100 Rorug04G0351200 Rorug04G0351300 Rorug04G0351300 Rorug04G0351300 Rorug04G0351300 Rorug07G0109600
rosa_samantha	Rh1BG171600 Rh4AG412000 Rh4BG070500 Rh4BG423500 Rh4CG078800 Rh4DG418700 Rh4DG418800
rosa_wichuraiana	Rw2G039380 Rw4G013770 Rw4G035390 Rw5G040980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	804
AccBSI	CCGCTC	1 cut(s)	143
AccI	GTMKAC	1 cut(s)	123
AciI	CCGC	2 cut(s)	96, 141
AclWI	GGATC	1 cut(s)	250
AcoI	YGGCCR	1 cut(s)	90
AfaI	GTAC	4 cut(s)	623, 702, 787, 799
AfiI	CCNNNNNNNGG	6 cut(s)	29, 489, 588, 737, 856, 1035
AflII	CTTAAG	1 cut(s)	614
AflIII	ACRYGT	1 cut(s)	792
AgsI	TTSAA	2 cut(s)	175, 844
AhlI	ACTAGT	1 cut(s)	62
AluBI	AGCT	8 cut(s)	201, 367, 381, 395, 566, 899, 915, 929
AluI	AGCT	8 cut(s)	201, 367, 381, 395, 566, 899, 915, 929
Alw21I	GWGCWC	1 cut(s)	383
Alw26I	GTCTC	1 cut(s)	691
AlwI	GGATC	1 cut(s)	250
AlwNI	CAGNNNCTG	1 cut(s)	824
Ama87I	CYCGRG	1 cut(s)	214
AoxI	GGCC	4 cut(s)	90, 454, 496, 603
ApaI	GGGCCC	1 cut(s)	458
ApeKI	GCWGC	3 cut(s)	387, 563, 926
Asp700I	GAANNNNTTC	1 cut(s)	111
AspS9I	GGNCC	5 cut(s)	454, 455, 541, 821, 1039
AsuHPI	GGTGA	3 cut(s)	49, 55, 70
AvaI	CYCGRG	1 cut(s)	214
AvaII	GGWCC	3 cut(s)	541, 821, 1039
BaeGI	GKGCMC	1 cut(s)	458
BalI	TGGCCA	1 cut(s)	92
BanI	GGYRCC	1 cut(s)	804
BanII	GRGCYC	2 cut(s)	383, 458
BbsI	GAAGAC	1 cut(s)	637
Bbv12I	GWGCWC	1 cut(s)	383
BbvI	GCAGC	3 cut(s)	399, 575, 938
BccI	CCATC	3 cut(s)	34, 215, 352
BceAI	ACGGC	1 cut(s)	839
BclI	TGATCA	1 cut(s)	636
BcoDI	GTCTC	1 cut(s)	691
BcuI	ACTAGT	1 cut(s)	62
BfaI	CTAG	3 cut(s)	63, 137, 560
BfmI	CTRYAG	5 cut(s)	402, 411, 459, 627, 809
BfrI	CTTAAG	1 cut(s)	614
BisI	GCNGC	4 cut(s)	141, 388, 564, 927
BlsI	GCNGC	4 cut(s)	142, 389, 565, 928
Bme18I	GGWCC	3 cut(s)	541, 821, 1039
BmeT110I	CYCGRG	1 cut(s)	214
BmgT120I	GGNCC	5 cut(s)	454, 455, 541, 821, 1039
BmiI	GGNNCC	5 cut(s)	456, 542, 806, 1040, 1041
BpiI	GAAGAC	1 cut(s)	637
Bpu10I	CCTNAGC	1 cut(s)	54
BpuEI	CTTGAG	1 cut(s)	367
Bsa29I	ATCGAT	1 cut(s)	876
BsaJI	CCNNGG	3 cut(s)	87, 544, 855
BsaXI	ACNNNNNCTCC	2 cut(s)	915, 945
Bsc4I	CCNNNNNNNGG	6 cut(s)	29, 489, 588, 737, 856, 1035
Bse1I	ACTGG	1 cut(s)	499
BseCI	ATCGAT	1 cut(s)	876
BseDI	CCNNGG	3 cut(s)	87, 544, 855
BseGI	GGATG	2 cut(s)	363, 1025
BseLI	CCNNNNNNNGG	6 cut(s)	29, 489, 588, 737, 856, 1035
BseMII	CTCAG	5 cut(s)	68, 92, 211, 244, 537
BseNI	ACTGG	1 cut(s)	499
BseRI	GAGGAG	1 cut(s)	391
BseSI	GKGCMC	1 cut(s)	458
BseXI	GCAGC	3 cut(s)	399, 575, 938
BseYI	CCCAGC	1 cut(s)	488
BsgI	GTGCAG	1 cut(s)	620
BshFI	GGCC	4 cut(s)	92, 456, 498, 605
BshNI	GGYRCC	1 cut(s)	804
BshVI	ATCGAT	1 cut(s)	876
BsiHKAI	GWGCWC	1 cut(s)	383
BsiHKCI	CYCGRG	1 cut(s)	214
BslFI	GGGAC	5 cut(s)	174, 276, 505, 906, 1025
BslI	CCNNNNNNNGG	6 cut(s)	29, 489, 588, 737, 856, 1035
BsmAI	GTCTC	1 cut(s)	691
BsmFI	GGGAC	5 cut(s)	174, 276, 505, 906, 1025
BsnI	GGCC	4 cut(s)	92, 456, 498, 605
BsoBI	CYCGRG	1 cut(s)	214
Bsp120I	GGGCCC	1 cut(s)	454
Bsp1286I	GDGCHC	2 cut(s)	383, 458
Bsp1407I	TGTACA	2 cut(s)	700, 797
Bsp143I	GATC	3 cut(s)	179, 242, 636
Bsp19I	CCATGG	1 cut(s)	87
BspACI	CCGC	2 cut(s)	96, 141
BspANI	GGCC	4 cut(s)	92, 456, 498, 605
BspCNI	CTCAG	5 cut(s)	67, 93, 210, 243, 536
BspDI	ATCGAT	1 cut(s)	876
BspLI	GGNNCC	5 cut(s)	456, 542, 806, 1040, 1041
BspMAI	CTGCAG	3 cut(s)	463, 631, 813
BspPI	GGATC	1 cut(s)	250
BspT107I	GGYRCC	1 cut(s)	804
BspTI	CTTAAG	1 cut(s)	614
BsrBI	CCGCTC	1 cut(s)	143
BsrGI	TGTACA	2 cut(s)	700, 797
BsrI	ACTGG	1 cut(s)	499
BssECI	CCNNGG	3 cut(s)	87, 544, 855
BssMI	GATC	3 cut(s)	179, 242, 636
BssT1I	CCWWGG	2 cut(s)	87, 544
Bst4CI	ACNGT	4 cut(s)	255, 412, 643, 998
Bst6I	CTCTTC	2 cut(s)	524, 972
BstAFI	CTTAAG	1 cut(s)	614
BstAUI	TGTACA	2 cut(s)	700, 797
BstC8I	GCNNGC	5 cut(s)	94, 475, 603, 747, 809
BstDEI	CTNAG	7 cut(s)	54, 101, 197, 230, 523, 710, 1018
BstDSI	CCRYGG	2 cut(s)	87, 855
BstF5I	GGATG	2 cut(s)	363, 1025
BstKTI	GATC	3 cut(s)	182, 245, 639
BstMAI	GTCTC	1 cut(s)	691
BstMBI	GATC	3 cut(s)	179, 242, 636
BstMWI	GCNNNNNNNGC	2 cut(s)	140, 387
BstNSI	RCATGY	1 cut(s)	796
BstSFI	CTRYAG	5 cut(s)	402, 411, 459, 627, 809
BstSLI	GKGCMC	1 cut(s)	458
BstV1I	GCAGC	3 cut(s)	399, 575, 938
BstV2I	GAAGAC	1 cut(s)	637
BstX2I	RGATCY	1 cut(s)	242
BstYI	RGATCY	1 cut(s)	242
Bsu15I	ATCGAT	1 cut(s)	876
BsuRI	GGCC	4 cut(s)	92, 456, 498, 605
BsuTUI	ATCGAT	1 cut(s)	876
BtgI	CCRYGG	2 cut(s)	87, 855
BtgZI	GCGATG	1 cut(s)	20
BtsCI	GGATG	2 cut(s)	363, 1025
BtsI	GCAGTG	1 cut(s)	636
BtsIMutI	CAGTG	4 cut(s)	636, 689, 1003, 1029
Cac8I	GCNNGC	5 cut(s)	94, 475, 603, 747, 809
CaiI	CAGNNNCTG	1 cut(s)	824
Cfr13I	GGNCC	5 cut(s)	454, 455, 541, 821, 1039
ClaI	ATCGAT	1 cut(s)	876
CseI	GACGC	1 cut(s)	176
Csp6I	GTAC	4 cut(s)	622, 701, 786, 798
CviAII	CATG	5 cut(s)	88, 307, 793, 801, 989
CviQI	GTAC	4 cut(s)	622, 701, 786, 798
DdeI	CTNAG	7 cut(s)	54, 101, 197, 230, 523, 710, 1018
DpnI	GATC	3 cut(s)	181, 244, 638
DpnII	GATC	3 cut(s)	179, 242, 636
DraI	TTTAAA	1 cut(s)	276
EaeI	YGGCCR	1 cut(s)	90
Eam1104I	CTCTTC	2 cut(s)	524, 972
EarI	CTCTTC	2 cut(s)	524, 972
Ecl136II	GAGCTC	1 cut(s)	381
Eco130I	CCWWGG	2 cut(s)	87, 544
Eco147I	AGGCCT	1 cut(s)	605
Eco24I	GRGCYC	2 cut(s)	383, 458
Eco47I	GGWCC	3 cut(s)	541, 821, 1039
Eco53kI	GAGCTC	1 cut(s)	381
Eco88I	CYCGRG	1 cut(s)	214
EcoICRI	GAGCTC	1 cut(s)	381
EcoO109I	RGGNCCY	5 cut(s)	454, 455, 541, 821, 1039
EcoT14I	CCWWGG	2 cut(s)	87, 544
EcoT38I	GRGCYC	2 cut(s)	383, 458
ErhI	CCWWGG	2 cut(s)	87, 544
FaeI	CATG	5 cut(s)	91, 310, 796, 804, 992
FaqI	GGGAC	5 cut(s)	174, 276, 505, 906, 1025
FatI	CATG	5 cut(s)	87, 306, 792, 800, 988
FbaI	TGATCA	1 cut(s)	636
FblI	GTMKAC	1 cut(s)	123
Fnu4HI	GCNGC	4 cut(s)	141, 388, 564, 927
FokI	GGATG	2 cut(s)	370, 1012
FriOI	GRGCYC	2 cut(s)	383, 458
Fsp4HI	GCNGC	4 cut(s)	141, 388, 564, 927
FspBI	CTAG	3 cut(s)	63, 137, 560
GluI	GCNGC	4 cut(s)	141, 388, 564, 927
GsaI	CCCAGC	1 cut(s)	492
HaeIII	GGCC	4 cut(s)	92, 456, 498, 605
HgaI	GACGC	1 cut(s)	176
Hin1II	CATG	5 cut(s)	91, 310, 796, 804, 992
HindIII	AAGCTT	1 cut(s)	913
HinfI	GANTC	3 cut(s)	46, 569, 1022
HphI	GGTGA	3 cut(s)	49, 55, 70
Hpy166II	GTNNAC	2 cut(s)	124, 798
Hpy188I	TCNGA	2 cut(s)	184, 526
Hpy188III	TCNNGA	6 cut(s)	214, 216, 249, 355, 577, 972
Hpy8I	GTNNAC	2 cut(s)	124, 798
HpyAV	CCTTC	3 cut(s)	454, 583, 998
HpyCH4III	ACNGT	4 cut(s)	255, 412, 643, 998
HpyCH4V	TGCA	8 cut(s)	461, 601, 629, 669, 680, 749, 811, 988
HpyF10VI	GCNNNNNNNGC	2 cut(s)	140, 387
HpyF3I	CTNAG	7 cut(s)	54, 101, 197, 230, 523, 710, 1018
Hsp92II	CATG	5 cut(s)	91, 310, 796, 804, 992
KflI	GGGWCCC	1 cut(s)	1039
Ksp22I	TGATCA	1 cut(s)	636
Kzo9I	GATC	3 cut(s)	179, 242, 636
LmnI	GCTCC	2 cut(s)	378, 923
Lsp1109I	GCAGC	3 cut(s)	399, 575, 938
MaeI	CTAG	3 cut(s)	63, 137, 560
MaeIII	GTNAC	2 cut(s)	58, 439
MalI	GATC	3 cut(s)	181, 244, 638
MbiI	CCGCTC	1 cut(s)	143
MboI	GATC	3 cut(s)	179, 242, 636
MboII	GAAGA	6 cut(s)	160, 163, 237, 511, 637, 989
MflI	RGATCY	1 cut(s)	242
MhlI	GDGCHC	2 cut(s)	383, 458
MlsI	TGGCCA	1 cut(s)	92
MluCI	AATT	5 cut(s)	370, 420, 609, 933, 1012
MluNI	TGGCCA	1 cut(s)	92
MlyI	GAGTC	1 cut(s)	563
MnlI	CCTC	7 cut(s)	295, 369, 493, 542, 592, 616, 714
Mox20I	TGGCCA	1 cut(s)	92
MroXI	GAANNNNTTC	1 cut(s)	111
MscI	TGGCCA	1 cut(s)	92
MseI	TTAA	5 cut(s)	257, 275, 297, 312, 615
MslI	CAYNNNNRTG	1 cut(s)	305
Msp20I	TGGCCA	1 cut(s)	92
MspA1I	CMGCKG	3 cut(s)	96, 566, 929
MspCI	CTTAAG	1 cut(s)	614
MssI	GTTTAAAC	1 cut(s)	276
MwoI	GCNNNNNNNGC	2 cut(s)	140, 387
NcoI	CCATGG	1 cut(s)	87
NdeII	GATC	3 cut(s)	179, 242, 636
NlaIII	CATG	5 cut(s)	91, 310, 796, 804, 992
NlaIV	GGNNCC	5 cut(s)	456, 542, 806, 1040, 1041
NmuCI	GTSAC	2 cut(s)	58, 439
NspI	RCATGY	1 cut(s)	796
PaeR7I	CTCGAG	1 cut(s)	214
PceI	AGGCCT	1 cut(s)	605
PciI	ACATGT	1 cut(s)	792
PdmI	GAANNNNTTC	1 cut(s)	111
PfeI	GAWTC	2 cut(s)	46, 1022
PkrI	GCNGC	4 cut(s)	142, 389, 565, 928
PleI	GAGTC	1 cut(s)	563
PmeI	GTTTAAAC	1 cut(s)	276
PpsI	GAGTC	1 cut(s)	563
PpuMI	RGGWCCY	3 cut(s)	541, 821, 1039
PscI	ACATGT	1 cut(s)	792
Psp124BI	GAGCTC	1 cut(s)	383
Psp5II	RGGWCCY	3 cut(s)	541, 821, 1039
PspFI	CCCAGC	1 cut(s)	488
PspN4I	GGNNCC	5 cut(s)	456, 542, 806, 1040, 1041
PspOMI	GGGCCC	1 cut(s)	454
PspPI	GGNCC	5 cut(s)	454, 455, 541, 821, 1039
PspPPI	RGGWCCY	3 cut(s)	541, 821, 1039
PstI	CTGCAG	3 cut(s)	463, 631, 813
PstNI	CAGNNNCTG	1 cut(s)	824
PsuI	RGATCY	1 cut(s)	242
PvuII	CAGCTG	2 cut(s)	566, 929
RsaI	GTAC	4 cut(s)	623, 702, 787, 799
RsaNI	GTAC	4 cut(s)	622, 701, 786, 798
RseI	CAYNNNNRTG	1 cut(s)	305
SacI	GAGCTC	1 cut(s)	383
SaqAI	TTAA	5 cut(s)	257, 275, 297, 312, 615
SatI	GCNGC	4 cut(s)	141, 388, 564, 927
Sau3AI	GATC	3 cut(s)	179, 242, 636
Sau96I	GGNCC	5 cut(s)	454, 455, 541, 821, 1039
SchI	GAGTC	1 cut(s)	563
SduI	GDGCHC	2 cut(s)	383, 458
SfcI	CTRYAG	5 cut(s)	402, 411, 459, 627, 809
Sfr274I	CTCGAG	1 cut(s)	214
SinI	GGWCC	3 cut(s)	541, 821, 1039
SlaI	CTCGAG	1 cut(s)	214
SmiMI	CAYNNNNRTG	1 cut(s)	305
SmlI	CTYRAG	3 cut(s)	214, 382, 614
SmoI	CTYRAG	3 cut(s)	214, 382, 614
SpeI	ACTAGT	1 cut(s)	62
Sse9I	AATT	5 cut(s)	370, 420, 609, 933, 1012
SseBI	AGGCCT	1 cut(s)	605
SsiI	CCGC	2 cut(s)	96, 141
SspI	AATATT	2 cut(s)	736, 885
SspMI	CTAG	3 cut(s)	63, 137, 560
SstI	GAGCTC	1 cut(s)	383
StuI	AGGCCT	1 cut(s)	605
StyI	CCWWGG	2 cut(s)	87, 544
TaaI	ACNGT	4 cut(s)	255, 412, 643, 998
TaqI	TCGA	3 cut(s)	215, 578, 876
TasI	AATT	5 cut(s)	370, 420, 609, 933, 1012
TatI	WGTACW	2 cut(s)	700, 797
TauI	GCSGC	1 cut(s)	143
TfiI	GAWTC	2 cut(s)	46, 1022
Tru1I	TTAA	5 cut(s)	257, 275, 297, 312, 615
Tru9I	TTAA	5 cut(s)	257, 275, 297, 312, 615
TscAI	CASTG	4 cut(s)	636, 696, 1003, 1036
TseFI	GTSAC	2 cut(s)	58, 439
TseI	GCWGC	3 cut(s)	387, 563, 926
Tsp45I	GTSAC	2 cut(s)	58, 439
TspDTI	ATGAA	3 cut(s)	325, 768, 1005
TspRI	CASTG	4 cut(s)	636, 696, 1003, 1036
Vha464I	CTTAAG	1 cut(s)	614
VpaK11BI	GGWCC	3 cut(s)	541, 821, 1039
XceI	RCATGY	1 cut(s)	796
XhoI	CTCGAG	1 cut(s)	214
XmiI	GTMKAC	1 cut(s)	123
XmnI	GAANNNNTTC	1 cut(s)	111
XspI	CTAG	3 cut(s)	63, 137, 560

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.