Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0001686

Physical Location & Seq

Genomic Coordinates Forward (+)

26764926 .. 26770720

Gene Structure 5795 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G257600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 876 bp

ATGGATAAATTTCTGCCATTTATTGGAATGGTGGTGGCGATTATGGCTCAGACTGGGAGTATGATGCTGAACAAAGCAGCCATGTCCAAAGGGACCAACAAATACATCTTCGTCGTCTACACCAATGCCCTCTCCGCCCTCATTCTTCTCCCTTACATCCTCATCTTCCACAGATGTTCATCTCAGATATTTGGAAATATCGGCATAGCATACAGCTCTCCCACGCTTGCCACGGCCATGCTTAACCTCATCCCAGCATTCACTTTCATACTTGCCATCATTTTCAGGATGGAAAAGGTGAACTGGAGAAGCTCAAGCAGCCAAGCAAAAGTTTGTGGAACCATAGTATCAATCACAGGAGCATTTGTTGTAACACTCTACAAAGGCCTGCCAATCATACAGCAATCAATATCACTTTCCAATTCACCCAATCAACTCCTTTTCTCATCACAATCAAACTGGATTCTGGGAGGGCTTTTTCTTGCAGCTGAAGCCTTCTCAACTTCTTTATGGTACACTATGCAGGGATTTGTCGTTAAGAAGTACCCAGCAGTGGTGTTCATAGTCTTTTACCAATGCTTAATTGCAACTGTTGGTTCTGCAGCAGTTACTTTAGTTGCAGTTAGAGATGCAAGTGCCTGGGAGCCAAGGCTGGATATGGGGCTGATTGCTATTTTATACGCTGCTGGAGCTCTTTTCTGTTCTGTGTTCAAGCCTCTTGGAATAATGTTTAGCGTGATCATGGGTGTCATCTTTTTGGGAGATTCAGTCTATCTTGGAAGTTTGATTGGTGCGCTCATATTTGTTATTGGATTTTATGCGATGATGTGGGGGAAGGCCACAGGAGAAGCTGGTCGAATCATTAGGCCAAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005887 GO:0005938 GO:0007154 GO:0007165 GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009987 GO:0010033 GO:0016020 GO:0016021 GO:0023052 GO:0031224 GO:0031226 GO:0032870 GO:0042221 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071944 GO:0099568

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EamA

Protein Analysis

292

Amino Acids

31.56

Weight (kDa)

9.62

Isoelectric Point (pI)

33.0

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001686)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g34870 FvH4_4g34870 FvH4_4g34870 FvH4_4g34870 FvH4_4g34870 FvH4_4g34870 FvH4_4g34870 FvH4_4g34870
malus_domestica	MD13G1088500.v1.1 MD13G1088700.v1.1 MD16G1088800.v1.1 MD16G1088900.v1.1
prunus_persica	Prupe.1G257200_v2.0.a1 Prupe.1G257300_v2.0.a1 Prupe.1G257400_v2.0.a1 Prupe.1G257500_v2.0.a1 Prupe.1G257600_v2.0.a1 Prupe.1G257700_v2.0.a1
pyrus_communis	pycom13g07640 pycom13g07650 pycom16g07610
rosa_chinensis	RchiOBHm_Chr4g0411271 RchiOBHm_Chr4g0444271 RchiOBHm_Chr4g0444291 RchiOBHm_Chr4g0444301
rosa_laevigata	RLG00000005843
rosa_multiflora	Rmu_sc0002841.1_g000015
rosa_roxburghii	Rroxscaffold_5G00384840 Rroxscaffold_5G00384850
rosa_rugosa	Rorug03G0072000 Rorug03G0072100 Rorug04G0351100 Rorug04G0351200 Rorug04G0351300 Rorug04G0351300 Rorug04G0351300 Rorug04G0351300 Rorug07G0109600
rosa_samantha	Rh1BG171600 Rh4AG412000 Rh4BG070500 Rh4BG423500 Rh4CG078800 Rh4DG418700 Rh4DG418800
rosa_wichuraiana	Rw2G039380 Rw4G013770 Rw4G035390 Rw5G040980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	23
AccI	GTMKAC	1 cut(s)	117
AciI	CCGC	1 cut(s)	135
AcoI	YGGCCR	1 cut(s)	234
AcsI	RAATTY	1 cut(s)	8
AcuI	CTGAAG	1 cut(s)	510
AfaI	GTAC	2 cut(s)	515, 545
AfiI	CCNNNNNNNGG	2 cut(s)	23, 553
AgsI	TTSAA	1 cut(s)	712
AjnI	CCWGG	1 cut(s)	638
AluBI	AGCT	5 cut(s)	216, 312, 488, 692, 851
AluI	AGCT	5 cut(s)	216, 312, 488, 692, 851
Alw21I	GWGCWC	1 cut(s)	694
AoxI	GGCC	4 cut(s)	234, 385, 837, 866
ApeKI	GCWGC	5 cut(s)	77, 318, 485, 602, 683
ApoI	RAATTY	1 cut(s)	8
AspLEI	GCGC	1 cut(s)	796
AspS9I	GGNCC	1 cut(s)	93
AsuHPI	GGTGA	2 cut(s)	310, 417
AvaII	GGWCC	1 cut(s)	93
BaeI	ACNNNNGTAYC	2 cut(s)	330, 363
BanII	GRGCYC	1 cut(s)	694
Bbv12I	GWGCWC	1 cut(s)	694
BbvI	GCAGC	5 cut(s)	89, 330, 497, 614, 670
BccI	CCATC	2 cut(s)	283, 284
BceAI	ACGGC	1 cut(s)	249
BciT130I	CCWGG	1 cut(s)	640
BclI	TGATCA	1 cut(s)	738
BfmI	CTRYAG	1 cut(s)	600
BisI	GCNGC	5 cut(s)	78, 319, 486, 603, 684
BlsI	GCNGC	5 cut(s)	79, 320, 487, 604, 685
Bme1390I	CCNGG	1 cut(s)	640
Bme18I	GGWCC	1 cut(s)	93
BmgT120I	GGNCC	1 cut(s)	93
BmiI	GGNNCC	3 cut(s)	94, 340, 645
BmrFI	CCNGG	1 cut(s)	640
BmrI	ACTGGG	1 cut(s)	63
BmsI	GCATC	2 cut(s)	54, 619
BmuI	ACTGGG	1 cut(s)	63
BpmI	CTGGAG	2 cut(s)	325, 708
BpuEI	CTTGAG	1 cut(s)	298
BsaBI	GATNNNNATC	1 cut(s)	178
BsaJI	CCNNGG	3 cut(s)	231, 639, 647
BsaXI	ACNNNNNCTCC	4 cut(s)	351, 381, 753, 783
Bsc4I	CCNNNNNNNGG	2 cut(s)	23, 553
Bse1I	ACTGG	3 cut(s)	58, 308, 464
Bse8I	GATNNNNATC	1 cut(s)	178
BseBI	CCWGG	1 cut(s)	640
BseDI	CCNNGG	3 cut(s)	231, 639, 647
BseGI	GGATG	3 cut(s)	156, 249, 294
BseJI	GATNNNNATC	1 cut(s)	178
BseLI	CCNNNNNNNGG	2 cut(s)	23, 553
BseMII	CTCAG	2 cut(s)	62, 197
BseNI	ACTGG	3 cut(s)	58, 308, 464
BseXI	GCAGC	5 cut(s)	89, 330, 497, 614, 670
BseYI	CCCAGC	2 cut(s)	253, 547
BshFI	GGCC	4 cut(s)	236, 387, 839, 868
BsiHKAI	GWGCWC	1 cut(s)	694
BslFI	GGGAC	1 cut(s)	106
BslI	CCNNNNNNNGG	2 cut(s)	23, 553
BsmFI	GGGAC	1 cut(s)	106
BsmI	GAATGC	1 cut(s)	257
BsnI	GGCC	4 cut(s)	236, 387, 839, 868
Bsp1286I	GDGCHC	1 cut(s)	694
Bsp143I	GATC	1 cut(s)	738
BspACI	CCGC	1 cut(s)	135
BspANI	GGCC	4 cut(s)	236, 387, 839, 868
BspCNI	CTCAG	2 cut(s)	61, 196
BspLI	GGNNCC	3 cut(s)	94, 340, 645
BspMAI	CTGCAG	1 cut(s)	604
BsrI	ACTGG	3 cut(s)	58, 308, 464
BssECI	CCNNGG	3 cut(s)	231, 639, 647
BssMI	GATC	1 cut(s)	738
BssT1I	CCWWGG	1 cut(s)	647
Bst2UI	CCWGG	1 cut(s)	640
Bst4CI	ACNGT	1 cut(s)	592
BstC8I	GCNNGC	2 cut(s)	228, 389
BstDEI	CTNAG	2 cut(s)	48, 183
BstDSI	CCRYGG	1 cut(s)	231
BstF5I	GGATG	3 cut(s)	156, 249, 294
BstHHI	GCGC	1 cut(s)	796
BstKTI	GATC	1 cut(s)	741
BstMBI	GATC	1 cut(s)	738
BstMWI	GCNNNNNNNGC	5 cut(s)	44, 134, 318, 491, 689
BstNI	CCWGG	1 cut(s)	640
BstSCI	CCNGG	1 cut(s)	638
BstSFI	CTRYAG	1 cut(s)	600
BstV1I	GCAGC	5 cut(s)	89, 330, 497, 614, 670
BsuRI	GGCC	4 cut(s)	236, 387, 839, 868
BtgI	CCRYGG	1 cut(s)	231
BtgZI	GCGATG	1 cut(s)	836
BtsCI	GGATG	3 cut(s)	156, 249, 294
BtsI	GCAGTG	1 cut(s)	558
BtsIMutI	CAGTG	1 cut(s)	558
Cac8I	GCNNGC	2 cut(s)	228, 389
CfoI	GCGC	1 cut(s)	796
Cfr13I	GGNCC	1 cut(s)	93
Csp6I	GTAC	2 cut(s)	514, 544
CviAII	CATG	3 cut(s)	82, 238, 742
CviQI	GTAC	2 cut(s)	514, 544
DdeI	CTNAG	2 cut(s)	48, 183
DpnI	GATC	1 cut(s)	740
DpnII	GATC	1 cut(s)	738
EaeI	YGGCCR	1 cut(s)	234
EciI	GGCGGA	1 cut(s)	124
Ecl136II	GAGCTC	1 cut(s)	692
Eco130I	CCWWGG	1 cut(s)	647
Eco147I	AGGCCT	1 cut(s)	387
Eco24I	GRGCYC	1 cut(s)	694
Eco47I	GGWCC	1 cut(s)	93
Eco53kI	GAGCTC	1 cut(s)	692
Eco57I	CTGAAG	1 cut(s)	510
EcoICRI	GAGCTC	1 cut(s)	692
EcoRII	CCWGG	1 cut(s)	638
EcoT14I	CCWWGG	1 cut(s)	647
EcoT38I	GRGCYC	1 cut(s)	694
ErhI	CCWWGG	1 cut(s)	647
FaeI	CATG	3 cut(s)	85, 241, 745
FaqI	GGGAC	1 cut(s)	106
FatI	CATG	3 cut(s)	81, 237, 741
FbaI	TGATCA	1 cut(s)	738
FblI	GTMKAC	1 cut(s)	117
Fnu4HI	GCNGC	5 cut(s)	78, 319, 486, 603, 684
FokI	GGATG	3 cut(s)	143, 236, 301
FriOI	GRGCYC	1 cut(s)	694
Fsp4HI	GCNGC	5 cut(s)	78, 319, 486, 603, 684
GlaI	GCGC	1 cut(s)	795
GluI	GCNGC	5 cut(s)	78, 319, 486, 603, 684
GsaI	CCCAGC	2 cut(s)	257, 551
GsuI	CTGGAG	2 cut(s)	325, 708
HaeIII	GGCC	4 cut(s)	236, 387, 839, 868
HhaI	GCGC	1 cut(s)	796
Hin1II	CATG	3 cut(s)	85, 241, 745
Hin6I	GCGC	1 cut(s)	794
HinP1I	GCGC	1 cut(s)	794
HinfI	GANTC	3 cut(s)	463, 764, 858
HphI	GGTGA	2 cut(s)	310, 417
Hpy166II	GTNNAC	3 cut(s)	118, 301, 516
Hpy188I	TCNGA	2 cut(s)	51, 186
Hpy188III	TCNNGA	1 cut(s)	286
Hpy8I	GTNNAC	3 cut(s)	118, 301, 516
Hpy99I	CGWCG	1 cut(s)	116
HpyAV	CCTTC	2 cut(s)	505, 829
HpyCH4III	ACNGT	1 cut(s)	592
HpyCH4V	TGCA	6 cut(s)	485, 523, 587, 602, 620, 632
HpyF10VI	GCNNNNNNNGC	5 cut(s)	44, 134, 318, 491, 689
HpyF3I	CTNAG	2 cut(s)	48, 183
Hsp92II	CATG	3 cut(s)	85, 241, 745
HspAI	GCGC	1 cut(s)	794
Ksp22I	TGATCA	1 cut(s)	738
Kzo9I	GATC	1 cut(s)	738
LmnI	GCTCC	3 cut(s)	359, 643, 689
Lsp1109I	GCAGC	5 cut(s)	89, 330, 497, 614, 670
LweI	GCATC	2 cut(s)	54, 619
MaeIII	GTNAC	2 cut(s)	370, 607
MalI	GATC	1 cut(s)	740
MboI	GATC	1 cut(s)	738
MboII	GAAGA	3 cut(s)	100, 137, 157
MhlI	GDGCHC	1 cut(s)	694
MluCI	AATT	3 cut(s)	8, 421, 582
MnlI	CCTC	6 cut(s)	140, 149, 170, 257, 464, 726
MseI	TTAA	3 cut(s)	243, 537, 581
MslI	CAYNNNNRTG	1 cut(s)	236
MspA1I	CMGCKG	1 cut(s)	488
MspR9I	CCNGG	1 cut(s)	640
Mva1269I	GAATGC	1 cut(s)	257
MvaI	CCWGG	1 cut(s)	640
MwoI	GCNNNNNNNGC	5 cut(s)	44, 134, 318, 491, 689
NdeII	GATC	1 cut(s)	738
NlaIII	CATG	3 cut(s)	85, 241, 745
NlaIV	GGNNCC	3 cut(s)	94, 340, 645
PceI	AGGCCT	1 cut(s)	387
PctI	GAATGC	1 cut(s)	257
PfeI	GAWTC	3 cut(s)	463, 764, 858
PflMI	CCANNNNNTGG	1 cut(s)	23
PkrI	GCNGC	5 cut(s)	79, 320, 487, 604, 685
Psp124BI	GAGCTC	1 cut(s)	694
Psp6I	CCWGG	1 cut(s)	638
PspFI	CCCAGC	2 cut(s)	253, 547
PspGI	CCWGG	1 cut(s)	638
PspN4I	GGNNCC	3 cut(s)	94, 340, 645
PspPI	GGNCC	1 cut(s)	93
PstI	CTGCAG	1 cut(s)	604
PvuII	CAGCTG	1 cut(s)	488
RsaI	GTAC	2 cut(s)	515, 545
RsaNI	GTAC	2 cut(s)	514, 544
RseI	CAYNNNNRTG	1 cut(s)	236
SacI	GAGCTC	1 cut(s)	694
SaqAI	TTAA	3 cut(s)	243, 537, 581
SatI	GCNGC	5 cut(s)	78, 319, 486, 603, 684
Sau3AI	GATC	1 cut(s)	738
Sau96I	GGNCC	1 cut(s)	93
ScrFI	CCNGG	1 cut(s)	640
SduI	GDGCHC	1 cut(s)	694
SetI	ASST	7 cut(s)	218, 249, 300, 314, 490, 694, 853
SfaNI	GCATC	2 cut(s)	54, 619
SfcI	CTRYAG	1 cut(s)	600
SinI	GGWCC	1 cut(s)	93
SmiMI	CAYNNNNRTG	1 cut(s)	236
SmlI	CTYRAG	1 cut(s)	313
SmoI	CTYRAG	1 cut(s)	313
Sse9I	AATT	3 cut(s)	8, 421, 582
SseBI	AGGCCT	1 cut(s)	387
SsiI	CCGC	1 cut(s)	135
SstI	GAGCTC	1 cut(s)	694
StuI	AGGCCT	1 cut(s)	387
StyD4I	CCNGG	1 cut(s)	638
StyI	CCWWGG	1 cut(s)	647
TaaI	ACNGT	1 cut(s)	592
TaqI	TCGA	1 cut(s)	856
TasI	AATT	3 cut(s)	8, 421, 582
TfiI	GAWTC	3 cut(s)	463, 764, 858
Tru1I	TTAA	3 cut(s)	243, 537, 581
Tru9I	TTAA	3 cut(s)	243, 537, 581
TscAI	CASTG	1 cut(s)	558
TseI	GCWGC	5 cut(s)	77, 318, 485, 602, 683
TspDTI	ATGAA	3 cut(s)	168, 256, 550
TspRI	CASTG	1 cut(s)	558
Van91I	CCANNNNNTGG	1 cut(s)	23
VpaK11BI	GGWCC	1 cut(s)	93
XapI	RAATTY	1 cut(s)	8
XmiI	GTMKAC	1 cut(s)	117

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.