Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0001686

Physical Location & Seq

Genomic Coordinates Forward (+)

5727929 .. 5738317

Gene Structure 10389 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0072100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3294 bp

ATGGAACGGGTTCAGGTTCAGATCCCAGATACTCCTGCAAAGAAAACTCAGAGACAACGTTCTAGCGGGATTTCTATGCTTACTGCCCCTACAAATTCTTTAGAGGAAAACAAAGAGAACCCGATTGCAGAGGACTTGTCTGCAATGGACGACGAGGTAGTGGATTGCAGTGGACTTATGGACACGATTTTGGATTCCATTGGTTCCTTGGATTTGAACAAGCCTGTGTGGGAGGAGTGGGTGACTGAGGAATTTGCTTATGGTTATAGGGCCGCATTATTGCAAACAGAAGATCTTGCAAGGGAGGATGAGGAAGTGTTGACATATAATCTTCCAAGTTCTCAGTCATCTTCCAATACCGAAAATCCTGAAAATCACAGTTGCGGTTTTGGCAGCTTAGAGGGTTCTTTCATGCCAGTTGTGCAACCTGGTTATGCTGCTGAATCCATGTCACAATATAATTTGAAGAATCAGGAATTAGTTGATGGCAAGTACAATATTGCTGATACAAATTATATTGGTAGCTTAAAAAGAAAACTACATGCTGCTACACTTCAAATGCCACGGAAGAGACTCAAGAGGCCGAAGAAAAAAGTTTACCGGCCAAAAGTGGTACGTAATTTAGGAAGGCCTATACCTAGAATGGAACCCAAGACTCCCACCAAAAAGAATGAAAGGATGAAGCTCAAAACACCAAAAATGAAGAAAAATGTGTCATTGAAGAAGTCTTCGAGCACAATCAACCTCAACCATGACCGAGTTCCTTTAGATTTGGAGCCTATTGTATCAGAGGGAGAAATTTCAAGCATTGACATAGAAAAGCACTCTAAAGATGGAACCCGCATCATATCAGAGAAGACAGTGGAGCATTGCATCACAAAATGCATTGATTTTGATATAGGATTAAATTTTTTGACGAAGAAAAAGAGGACGACGATGGGAAAGAAATGGGAAGTGAAAGACTATAGTAGAATAATGGAACCGAATCTTCTGAAAATAAAAAAGAAAAAAAGGATGGGCAGGAGGAGATGGGAAGTAGAAGTGTGGAAAAAAATAGCTAGCAAGTTTCAGACAAACTATCTTAAACGGAGACGCAATAAAAAGAGAAGAACTGCCCCCGAAATCAGTCAACAGGAAGTGCGCAACATCTTTAACACCGAAAAGCAGTTGTCTCCATGCTTCATCACCGAATCAGGAGTATTGAACATTGAAGAAAGCTTAACAGGAATGGTGAGCTTACTGGAAAGTGATAGTTTTGAGTTGTTCTTCAAATCAACAGATATACTTGAAGATAATATCAATGTTGTGCAAAAACATCAACTTAACCGTGGGATACTTGTTTGTTACCAAGAAAATGAGAAACATGGTCCTCATGTTGAGCTGGGTATCGTAGCCAGTGCAAATGGTGAGCTTGGTATGGTAGCCACGACAAAGGGAAAGGGAAGGAGGCAAGAAAAGCTTGAGAAATTAGAACATGGTGAACTAGCTCACCCATGGAAGCTTCAATTGCAAAATGAAGTTAAGGAGGGGGACAAACATGACCCGAATTCTGAATTTTGGGATAAGGAGAGACAATTCTTTCAGGGTCGGATTGACTTATTTTTAACTCGTATGCGCATCGTTCAAGGAAATAGAAAATTTTCAGAATGGGATGGATCAGTTATGGATTCGATAGTCGGAGTTTTTTTAACACAGAACGTATCAGATCATCTATCCAGTTCTGCCTTTATATCACTCGCTGCAGCTTTCCCATATCAGCCCAGTTGTAACCAAGAATTAACTTATGCAAACTCAGAGCCAAGTTGTGAGCAATCAAGAATTGTTAAAATTGAGGAATTAGTAGAGGGTGGAATCTCAAAGTCCAGCTGTGAATCACAATCAAATGACCAAACATATTGTGAAGATATAAATAGTGGCAGCCATAAATTGGTTGGAAGTAACATGGTATTTGATAAAGAGTCGTTCACACAAGAAGCCACAACTACAATGAAGTACGAAAATCAGAAGTCAAGTGATTGCGAAATGGTATTAGCCAAACAAGTTGAGTTGCAGCAAAATTTTGAGGGTCAAGATTATTACGTGGACATGCCATCTGATAAGCCTGACTGCTCGATTGATATTATTACTGAAAATTCGCTTTCTTACTTCAATGAGGAAAAGCAAAGAAGAAAGAAGTTGAAGGTGGATGCTCGAGAAATAAATAATGAGGGTGCTATGGTGAATGGAAAACCTGATTGGGATTATTATAGGAGAGACATTGAAAAGGAAAGAAAGATCAGGCACATGGCGGATTCGGTAGACTGGCAGGCCGTTAGACAAGCAGATGTTGGTGATATTGCTGAAGCCATCAAAGGACGTGGACAACATCGTGTCATCGCAGATCGAATAAAGAAATTTCTTAATGACGTGAATCAAGACCATAAAGAAATAAACCTTGAGTGGCTAAGATGGGCTCCAGACAAACTAGCAAGGAAATATTTGACTAATATCGAGGGAATTGGCCTGAAAAGTGTAGAGTGCGTGCGCCTTTTAGCACTCAAGCAGATAGCCTTCCCGGTGGACGTTAATGTTGGCAGGATAGCCATTCGTTTAGGGTGGGTGCCTATGCAACCATTACCTGAAGATGTTCAGATACACGTATTAGAAGAGATGCCGGTTATGGACAATATTCAAAAGTATCTTTGGCCTCGGCTAATGAAATTGAAGTTCGAAGAATTGTATGAACTACACTATCAAATGATAACCTTTGGAAAGGTTTATTGTACCAAACGTAAACCTAATTGTCATTCATGTCCAATGAAGAACGAGTGCAAGTATTATCTTAGTGCATATGCAAGTTCAAAATATGCTGCTTTACCGAAGTCAATGAAGAAGCAAGGACAAAAGAAAACTGATGTGGTTATTTGCAATAATCATCTTTCTTCTGGGTATGAGCCAGTAAATGCAGCATCACAATCATATCTTGAGGACACTACTAAATTAGAATATCAAATAAAAGATTGTGAACCGATAATTGAAGAACCAGCAGCACCTCGACCGTCATTTCCGGAACCAGAATATGTGGAAAGAGATATTGAAGATTTATTCCTTGATGATCCTTTTAAAGAGTTCGTAAAAAGTCCATATATGAATACATTTCGAGGAAGTGATATCTCAACACTAGTTCCCTTTATGACTCCAGAAGATGCTGCTTTCATCCCCGCTCGTAGACTAAAAGAAGTGGACCGTTTGAGGACAAAACACTCAGTCTACGAGATTAAAGATCAAGGCCCTTTATTTAAAGAGGTAAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005887 GO:0005938 GO:0006810 GO:0007154 GO:0007165 GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009987 GO:0010033 GO:0016020 GO:0016021 GO:0022857 GO:0023052 GO:0031224 GO:0031226 GO:0032870 GO:0042221 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071944 GO:0099568

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EamA

Protein Analysis

1097

Amino Acids

126.26

Weight (kDa)

7.26

Isoelectric Point (pI)

49.36

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001686)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g34870 FvH4_4g34870 FvH4_4g34870 FvH4_4g34870 FvH4_4g34870 FvH4_4g34870 FvH4_4g34870 FvH4_4g34870
malus_domestica	MD13G1088500.v1.1 MD13G1088700.v1.1 MD16G1088800.v1.1 MD16G1088900.v1.1
prunus_persica	Prupe.1G257200_v2.0.a1 Prupe.1G257300_v2.0.a1 Prupe.1G257400_v2.0.a1 Prupe.1G257500_v2.0.a1 Prupe.1G257600_v2.0.a1 Prupe.1G257700_v2.0.a1
pyrus_communis	pycom13g07640 pycom13g07650 pycom16g07610
rosa_chinensis	RchiOBHm_Chr4g0411271 RchiOBHm_Chr4g0444271 RchiOBHm_Chr4g0444291 RchiOBHm_Chr4g0444301
rosa_laevigata	RLG00000005843
rosa_multiflora	Rmu_sc0002841.1_g000015
rosa_roxburghii	Rroxscaffold_5G00384840 Rroxscaffold_5G00384850
rosa_rugosa	Rorug03G0072000 Rorug03G0072100 Rorug04G0351100 Rorug04G0351200 Rorug04G0351300 Rorug04G0351300 Rorug04G0351300 Rorug04G0351300 Rorug07G0109600
rosa_samantha	Rh1BG171600 Rh4AG412000 Rh4BG070500 Rh4BG423500 Rh4CG078800 Rh4DG418700 Rh4DG418800
rosa_wichuraiana	Rw2G039380 Rw4G013770 Rw4G035390 Rw5G040980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	1142, 1616
AccB1I	GGYRCC	1 cut(s)	2599
AccB7I	CCANNNNNTGG	1 cut(s)	1927
AccBSI	CCGCTC	1 cut(s)	3203
AccI	GTMKAC	3 cut(s)	2298, 3208, 3249
AccIII	TCCGGA	1 cut(s)	3046
AciI	CCGC	6 cut(s)	66, 273, 384, 841, 2288, 3201
AclI	AACGTT	1 cut(s)	58
AclWI	GGATC	3 cut(s)	16, 1663, 3089
AcoI	YGGCCR	1 cut(s)	602
AcuI	CTGAAG	2 cut(s)	2361, 2640
AfaI	GTAC	4 cut(s)	494, 615, 1994, 2764
AfiI	CCNNNNNNNGG	1 cut(s)	1927
AflIII	ACRYGT	1 cut(s)	2635
AhlI	ACTAGT	1 cut(s)	3160
AjiI	CACGTC	2 cut(s)	2357, 2407
AjnI	CCWGG	1 cut(s)	427
AjuI	GAANNNNNNNTTGG	2 cut(s)	2218, 2250
Alw21I	GWGCWC	1 cut(s)	737
Alw26I	GTCTC	6 cut(s)	46, 565, 1084, 1176, 1564, 2247
AlwI	GGATC	3 cut(s)	16, 1663, 3089
Ama87I	CYCGRG	1 cut(s)	2190
Aor13HI	TCCGGA	1 cut(s)	3046
AoxI	GGCC	8 cut(s)	270, 581, 602, 629, 2307, 2500, 2684, 3268
Asp700I	GAANNNNTTC	3 cut(s)	9, 1639, 2625
AspLEI	GCGC	3 cut(s)	1143, 1617, 2526
AspS9I	GGNCC	4 cut(s)	270, 1367, 3223, 3269
AsuC2I	CCSGG	1 cut(s)	2555
AsuHPI	GGTGA	8 cut(s)	253, 1177, 1243, 1418, 1481, 1490, 2230, 2342
AsuII	TTCGAA	1 cut(s)	2709
AsuNHI	GCTAGC	1 cut(s)	1058
AvaI	CYCGRG	1 cut(s)	2190
AvaII	GGWCC	2 cut(s)	1367, 3223
BanI	GGYRCC	1 cut(s)	2599
BanII	GRGCYC	1 cut(s)	2455
BbsI	GAAGAC	2 cut(s)	720, 863
Bbv12I	GWGCWC	1 cut(s)	737
BccI	CCATC	9 cut(s)	479, 827, 931, 1009, 1023, 1646, 2098, 2354, 2442
BceAI	ACGGC	1 cut(s)	2294
BciT130I	CCWGG	1 cut(s)	429
BciVI	GTATCC	1 cut(s)	1326
BcnI	CCSGG	1 cut(s)	2555
BcoDI	GTCTC	6 cut(s)	46, 565, 1084, 1176, 1564, 2247
BcuI	ACTAGT	1 cut(s)	3160
BfaI	CTAG	6 cut(s)	63, 639, 1059, 1484, 2465, 3161
BfmI	CTRYAG	2 cut(s)	964, 1740
BfuI	GTATCC	1 cut(s)	1326
BglII	AGATCT	1 cut(s)	292
Bme1390I	CCNGG	2 cut(s)	429, 2555
Bme18I	GGWCC	2 cut(s)	1367, 3223
BmeT110I	CYCGRG	1 cut(s)	2190
BmgBI	CACGTC	2 cut(s)	2357, 2407
BmgT120I	GGNCC	4 cut(s)	270, 1367, 3223, 3269
BmiI	GGNNCC	8 cut(s)	205, 648, 777, 838, 981, 2454, 2601, 3051
BmrFI	CCNGG	2 cut(s)	429, 2555
BmrI	ACTGGG	1 cut(s)	1755
BmsI	GCATC	7 cut(s)	852, 882, 1626, 2176, 2640, 2957, 3175
BmtI	GCTAGC	1 cut(s)	1062
BmuI	ACTGGG	1 cut(s)	1755
BpiI	GAAGAC	2 cut(s)	720, 863
BpmI	CTGGAG	2 cut(s)	2439, 3162
Bpu14I	TTCGAA	1 cut(s)	2709
BpuEI	CTTGAG	5 cut(s)	560, 1481, 2456, 2522, 2984
BpuMI	CCSGG	1 cut(s)	2555
BsaAI	YACGTR	3 cut(s)	617, 2080, 2638
BsaJI	CCNNGG	5 cut(s)	207, 563, 1327, 1493, 2687
BsaWI	WCCGGW	1 cut(s)	3046
Bsc4I	CCNNNNNNNGG	1 cut(s)	1927
Bse118I	RCCGGY	2 cut(s)	600, 2653
Bse1I	ACTGG	7 cut(s)	416, 1245, 1395, 1716, 1761, 2306, 2936
Bse3DI	GCAATG	2 cut(s)	150, 868
BseAI	TCCGGA	1 cut(s)	3046
BseBI	CCWGG	1 cut(s)	429
BseDI	CCNNGG	5 cut(s)	207, 563, 1327, 1493, 2687
BseGI	GGATG	6 cut(s)	313, 684, 1020, 1657, 2191, 3195
BseLI	CCNNNNNNNGG	1 cut(s)	1927
BseMI	GCAATG	2 cut(s)	150, 868
BseMII	CTCAG	5 cut(s)	62, 237, 356, 1806, 3258
BseNI	ACTGG	7 cut(s)	416, 1245, 1395, 1716, 1761, 2306, 2936
BseRI	GAGGAG	2 cut(s)	248, 1039
BseYI	CCCAGC	1 cut(s)	1381
Bsh1285I	CGRYCG	1 cut(s)	3038
BshFI	GGCC	8 cut(s)	272, 583, 604, 631, 2309, 2502, 2686, 3270
BshNI	GGYRCC	1 cut(s)	2599
BsiEI	CGRYCG	1 cut(s)	3038
BsiHKAI	GWGCWC	1 cut(s)	737
BsiHKCI	CYCGRG	1 cut(s)	2190
BsiSI	CCGG	4 cut(s)	601, 2555, 2654, 3047
BslFI	GGGAC	1 cut(s)	1544
BslI	CCNNNNNNNGG	1 cut(s)	1927
BsmAI	GTCTC	6 cut(s)	46, 565, 1084, 1176, 1564, 2247
BsmBI	CGTCTC	1 cut(s)	1084
BsmFI	GGGAC	1 cut(s)	1544
BsnI	GGCC	8 cut(s)	272, 583, 604, 631, 2309, 2502, 2686, 3270
BsoBI	CYCGRG	1 cut(s)	2190
Bsp119I	TTCGAA	1 cut(s)	2709
Bsp1286I	GDGCHC	2 cut(s)	737, 2455
Bsp13I	TCCGGA	1 cut(s)	3046
Bsp143I	GATC	8 cut(s)	21, 292, 1655, 1705, 2274, 2380, 3094, 3262
Bsp19I	CCATGG	1 cut(s)	1493
BspACI	CCGC	6 cut(s)	66, 273, 384, 841, 2288, 3201
BspANI	GGCC	8 cut(s)	272, 583, 604, 631, 2309, 2502, 2686, 3270
BspCNI	CTCAG	5 cut(s)	61, 238, 355, 1805, 3257
BspEI	TCCGGA	1 cut(s)	3046
BspLI	GGNNCC	8 cut(s)	205, 648, 777, 838, 981, 2454, 2601, 3051
BspMAI	CTGCAG	1 cut(s)	1744
BspOI	GCTAGC	1 cut(s)	1062
BspPI	GGATC	3 cut(s)	16, 1663, 3089
BspT104I	TTCGAA	1 cut(s)	2709
BspT107I	GGYRCC	1 cut(s)	2599
BsrBI	CCGCTC	1 cut(s)	3203
BsrDI	GCAATG	2 cut(s)	150, 868
BsrFI	RCCGGY	2 cut(s)	600, 2653
BsrI	ACTGG	7 cut(s)	416, 1245, 1395, 1716, 1761, 2306, 2936
BssAI	RCCGGY	2 cut(s)	600, 2653
BssECI	CCNNGG	5 cut(s)	207, 563, 1327, 1493, 2687
BssMI	GATC	8 cut(s)	21, 292, 1655, 1705, 2274, 2380, 3094, 3262
BssT1I	CCWWGG	2 cut(s)	207, 1493
Bst2UI	CCWGG	1 cut(s)	429
Bst4CI	ACNGT	5 cut(s)	380, 862, 1328, 3039, 3227
Bst6I	CTCTTC	2 cut(s)	563, 2640
BstBAI	YACGTR	3 cut(s)	617, 2080, 2638
BstBI	TTCGAA	1 cut(s)	2709
BstC8I	GCNNGC	3 cut(s)	1060, 2307, 2522
BstDEI	CTNAG	8 cut(s)	48, 246, 342, 397, 1792, 2444, 2822, 3244
BstDSI	CCRYGG	3 cut(s)	563, 1327, 1493
BstF5I	GGATG	6 cut(s)	313, 684, 1020, 1657, 2191, 3195
BstHHI	GCGC	3 cut(s)	1143, 1617, 2526
BstKTI	GATC	8 cut(s)	24, 295, 1658, 1708, 2277, 2383, 3097, 3265
BstMAI	GTCTC	6 cut(s)	46, 565, 1084, 1176, 1564, 2247
BstMBI	GATC	8 cut(s)	21, 292, 1655, 1705, 2274, 2380, 3094, 3262
BstMCI	CGRYCG	1 cut(s)	3038
BstMWI	GCNNNNNNNGC	4 cut(s)	390, 421, 1456, 1507
BstNI	CCWGG	1 cut(s)	429
BstNSI	RCATGY	2 cut(s)	545, 2089
BstSCI	CCNGG	2 cut(s)	427, 2553
BstSFI	CTRYAG	2 cut(s)	964, 1740
BstSNI	TACGTA	1 cut(s)	617
BstV2I	GAAGAC	2 cut(s)	720, 863
BstX2I	RGATCY	2 cut(s)	21, 292
BstYI	RGATCY	2 cut(s)	21, 292
BsuI	GTATCC	1 cut(s)	1326
BsuRI	GGCC	8 cut(s)	272, 583, 604, 631, 2309, 2502, 2686, 3270
BtgI	CCRYGG	3 cut(s)	563, 1327, 1493
BtgZI	GCGATG	1 cut(s)	2359
BtrI	CACGTC	2 cut(s)	2357, 2407
BtsCI	GGATG	6 cut(s)	313, 684, 1020, 1657, 2191, 3195
BtsI	GCAGTG	1 cut(s)	175
BtsIMutI	CAGTG	3 cut(s)	175, 867, 1402
Cac8I	GCNNGC	3 cut(s)	1060, 2307, 2522
CfoI	GCGC	3 cut(s)	1143, 1617, 2526
Cfr10I	RCCGGY	2 cut(s)	600, 2653
Cfr13I	GGNCC	4 cut(s)	270, 1367, 3223, 3269
CseI	GACGC	1 cut(s)	1101
CsiI	ACCWGGT	1 cut(s)	427
Csp6I	GTAC	4 cut(s)	493, 614, 1993, 2763
CspCI	CAANNNNNGTGG	2 cut(s)	2338, 2373
CviQI	GTAC	4 cut(s)	493, 614, 1993, 2763
DdeI	CTNAG	8 cut(s)	48, 246, 342, 397, 1792, 2444, 2822, 3244
DpnI	GATC	8 cut(s)	23, 294, 1657, 1707, 2276, 2382, 3096, 3264
DpnII	GATC	8 cut(s)	21, 292, 1655, 1705, 2274, 2380, 3094, 3262
DraI	TTTAAA	2 cut(s)	3103, 3280
EaeI	YGGCCR	1 cut(s)	602
Eam1104I	CTCTTC	2 cut(s)	563, 2640
EarI	CTCTTC	2 cut(s)	563, 2640
EciI	GGCGGA	1 cut(s)	2303
Eco105I	TACGTA	1 cut(s)	617
Eco130I	CCWWGG	2 cut(s)	207, 1493
Eco147I	AGGCCT	1 cut(s)	631
Eco24I	GRGCYC	1 cut(s)	2455
Eco32I	GATATC	1 cut(s)	3151
Eco47I	GGWCC	2 cut(s)	1367, 3223
Eco57I	CTGAAG	2 cut(s)	2361, 2640
Eco88I	CYCGRG	1 cut(s)	2190
EcoO109I	RGGNCCY	1 cut(s)	3269
EcoRI	GAATTC	1 cut(s)	1546
EcoRII	CCWGG	1 cut(s)	427
EcoRV	GATATC	1 cut(s)	3151
EcoT14I	CCWWGG	2 cut(s)	207, 1493
EcoT22I	ATGCAT	1 cut(s)	887
EcoT38I	GRGCYC	1 cut(s)	2455
ErhI	CCWWGG	2 cut(s)	207, 1493
Esp3I	CGTCTC	1 cut(s)	1084
FalI	AAGNNNNNCTT	2 cut(s)	1443, 1475
FaqI	GGGAC	1 cut(s)	1544
FauI	CCCGC	3 cut(s)	59, 848, 3208
FauNDI	CATATG	1 cut(s)	2830
FblI	GTMKAC	3 cut(s)	2298, 3208, 3249
FokI	GGATG	6 cut(s)	320, 691, 1027, 1664, 2198, 3182
FriOI	GRGCYC	1 cut(s)	2455
FspAI	RTGCGCAY	1 cut(s)	1616
FspBI	CTAG	6 cut(s)	63, 639, 1059, 1484, 2465, 3161
FspI	TGCGCA	2 cut(s)	1142, 1616
GlaI	GCGC	3 cut(s)	1142, 1616, 2525
GsaI	CCCAGC	1 cut(s)	1385
GsuI	CTGGAG	2 cut(s)	2439, 3162
HaeIII	GGCC	8 cut(s)	272, 583, 604, 631, 2309, 2502, 2686, 3270
HapII	CCGG	4 cut(s)	601, 2555, 2654, 3047
HgaI	GACGC	1 cut(s)	1101
HhaI	GCGC	3 cut(s)	1143, 1617, 2526
Hin6I	GCGC	3 cut(s)	1141, 1615, 2524
HinP1I	GCGC	3 cut(s)	1141, 1615, 2524
HincII	GTYRAC	2 cut(s)	321, 1130
HindII	GTYRAC	2 cut(s)	321, 1130
HindIII	AAGCTT	3 cut(s)	1216, 1457, 1499
HpaII	CCGG	4 cut(s)	601, 2555, 2654, 3047
HphI	GGTGA	8 cut(s)	253, 1177, 1243, 1418, 1481, 1490, 2230, 2342
Hpy99I	CGWCG	2 cut(s)	155, 937
HpyAV	CCTTC	4 cut(s)	621, 1437, 2173, 2560
HpyCH4III	ACNGT	5 cut(s)	380, 862, 1328, 3039, 3227
HpyCH4IV	ACGT	9 cut(s)	58, 616, 1698, 2079, 2356, 2406, 2562, 2637, 2770
HpyF10VI	GCNNNNNNNGC	4 cut(s)	390, 421, 1456, 1507
HpyF3I	CTNAG	8 cut(s)	48, 246, 342, 397, 1792, 2444, 2822, 3244
HpySE526I	ACGT	9 cut(s)	58, 616, 1698, 2079, 2356, 2406, 2562, 2637, 2770
HspAI	GCGC	3 cut(s)	1141, 1615, 2524
Kpn2I	TCCGGA	1 cut(s)	3046
Kzo9I	GATC	8 cut(s)	21, 292, 1655, 1705, 2274, 2380, 3094, 3262
LmnI	GCTCC	3 cut(s)	775, 865, 2458
LweI	GCATC	7 cut(s)	852, 882, 1626, 2176, 2640, 2957, 3175
MabI	ACCWGGT	1 cut(s)	427
MaeI	CTAG	6 cut(s)	63, 639, 1059, 1484, 2465, 3161
MaeII	ACGT	9 cut(s)	58, 616, 1698, 2079, 2356, 2406, 2562, 2637, 2770
MaeIII	GTNAC	5 cut(s)	241, 450, 1343, 1766, 1937
MalI	GATC	8 cut(s)	23, 294, 1657, 1707, 2276, 2382, 3096, 3264
MbiI	CCGCTC	1 cut(s)	3203
MboI	GATC	8 cut(s)	21, 292, 1655, 1705, 2274, 2380, 3094, 3262
MfeI	CAATTG	1 cut(s)	1505
MflI	RGATCY	2 cut(s)	21, 292
MhlI	GDGCHC	2 cut(s)	737, 2455
MlyI	GAGTC	4 cut(s)	567, 649, 1967, 3169
MmeI	TCCRAC	3 cut(s)	1568, 1657, 1912
Mph1103I	ATGCAT	1 cut(s)	887
MroI	TCCGGA	1 cut(s)	3046
MroXI	GAANNNNTTC	3 cut(s)	9, 1639, 2625
MspA1I	CMGCKG	1 cut(s)	1866
MspI	CCGG	4 cut(s)	601, 2555, 2654, 3047
MspR9I	CCNGG	2 cut(s)	429, 2555
MunI	CAATTG	1 cut(s)	1505
MvaI	CCWGG	1 cut(s)	429
MwoI	GCNNNNNNNGC	4 cut(s)	390, 421, 1456, 1507
NciI	CCSGG	1 cut(s)	2555
NcoI	CCATGG	1 cut(s)	1493
NdeI	CATATG	1 cut(s)	2830
NdeII	GATC	8 cut(s)	21, 292, 1655, 1705, 2274, 2380, 3094, 3262
NheI	GCTAGC	1 cut(s)	1058
NlaIV	GGNNCC	8 cut(s)	205, 648, 777, 838, 981, 2454, 2601, 3051
NmeAIII	GCCGAG	1 cut(s)	2668
NmuCI	GTSAC	2 cut(s)	241, 450
NsbI	TGCGCA	2 cut(s)	1142, 1616
NsiI	ATGCAT	1 cut(s)	887
NspI	RCATGY	2 cut(s)	545, 2089
NspV	TTCGAA	1 cut(s)	2709
PaeR7I	CTCGAG	1 cut(s)	2190
PceI	AGGCCT	1 cut(s)	631
PdmI	GAANNNNTTC	3 cut(s)	9, 1639, 2625
PflMI	CCANNNNNTGG	1 cut(s)	1927
PleI	GAGTC	4 cut(s)	567, 649, 1966, 3169
PpsI	GAGTC	4 cut(s)	567, 649, 1966, 3169
Ppu21I	YACGTR	3 cut(s)	617, 2080, 2638
Psp1406I	AACGTT	1 cut(s)	58
Psp6I	CCWGG	1 cut(s)	427
PspFI	CCCAGC	1 cut(s)	1381
PspGI	CCWGG	1 cut(s)	427
PspN4I	GGNNCC	8 cut(s)	205, 648, 777, 838, 981, 2454, 2601, 3051
PspPI	GGNCC	4 cut(s)	270, 1367, 3223, 3269
PstI	CTGCAG	1 cut(s)	1744
PsuI	RGATCY	2 cut(s)	21, 292
PvuII	CAGCTG	1 cut(s)	1866
RsaI	GTAC	4 cut(s)	494, 615, 1994, 2764
RsaNI	GTAC	4 cut(s)	493, 614, 1993, 2763
Sau3AI	GATC	8 cut(s)	21, 292, 1655, 1705, 2274, 2380, 3094, 3262
Sau96I	GGNCC	4 cut(s)	270, 1367, 3223, 3269
SchI	GAGTC	4 cut(s)	567, 649, 1967, 3169
ScrFI	CCNGG	2 cut(s)	429, 2555
SduI	GDGCHC	2 cut(s)	737, 2455
SexAI	ACCWGGT	1 cut(s)	427
SfaNI	GCATC	7 cut(s)	852, 882, 1626, 2176, 2640, 2957, 3175
SfcI	CTRYAG	2 cut(s)	964, 1740
Sfr274I	CTCGAG	1 cut(s)	2190
SfuI	TTCGAA	1 cut(s)	2709
SinI	GGWCC	2 cut(s)	1367, 3223
SlaI	CTCGAG	1 cut(s)	2190
SmlI	CTYRAG	6 cut(s)	575, 1460, 2190, 2435, 2537, 2963
SmoI	CTYRAG	6 cut(s)	575, 1460, 2190, 2435, 2537, 2963
SnaBI	TACGTA	1 cut(s)	617
SpeI	ACTAGT	1 cut(s)	3160
SseBI	AGGCCT	1 cut(s)	631
SsiI	CCGC	6 cut(s)	66, 273, 384, 841, 2288, 3201
SspI	AATATT	3 cut(s)	499, 2477, 2668
SspMI	CTAG	6 cut(s)	63, 639, 1059, 1484, 2465, 3161
StuI	AGGCCT	1 cut(s)	631
StyD4I	CCNGG	2 cut(s)	427, 2553
StyI	CCWWGG	2 cut(s)	207, 1493
TaaI	ACNGT	5 cut(s)	380, 862, 1328, 3039, 3227
TaiI	ACGT	9 cut(s)	61, 619, 1701, 2082, 2359, 2409, 2565, 2640, 2773
TaqI	TCGA	9 cut(s)	731, 1670, 2111, 2191, 2383, 2490, 2709, 3034, 3139
TaqII	GACCGA	1 cut(s)	771
TatI	WGTACW	1 cut(s)	492
TauI	GCSGC	1 cut(s)	275
TscAI	CASTG	3 cut(s)	175, 867, 1402
TseFI	GTSAC	2 cut(s)	241, 450
Tsp45I	GTSAC	2 cut(s)	241, 450
TspGWI	ACGGA	2 cut(s)	580, 1102
TspRI	CASTG	3 cut(s)	175, 867, 1402
Van91I	CCANNNNNTGG	1 cut(s)	1927
VpaK11BI	GGWCC	2 cut(s)	1367, 3223
XceI	RCATGY	2 cut(s)	545, 2089
XcmI	CCANNNNNNNNNTGG	2 cut(s)	205, 1928
XhoI	CTCGAG	1 cut(s)	2190
XmiI	GTMKAC	3 cut(s)	2298, 3208, 3249
XmnI	GAANNNNTTC	3 cut(s)	9, 1639, 2625
XspI	CTAG	6 cut(s)	63, 639, 1059, 1484, 2465, 3161
Zsp2I	ATGCAT	1 cut(s)	887

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.