Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0001686

Physical Location & Seq

Genomic Coordinates Forward (+)

26755054 .. 26757420

Gene Structure 2367 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G257500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1137 bp

ATGTATATGTCACAAGGCACAACACCAGGTGCATGCTTACAGCACACACAAAGGTTATTCTGGTTTTTTTTTTCCCTTCTTGGCATGGGGAAGGGAATTTCAGTGGCTTTTGTGGCACTGGTGATGGCAGTTCTTGCTCAGGTGACTAGTATGATATTGACCAAAGAAGCCATGAGCATCGGACTGAGTGAATATACTCTTGTTGTCTACTCTAATGCTCTCTCCACTCTTATCCTTACCCCTTCTTCCTTCATCTTTCACAGATTAGAGCGTCCTCCGCTCAGCTTTTACATTGTCTTCAGCTTCTTCTTACTTGGCTTTATTGGAACTTCTGCACAGTTAATGGGACTTGCTGGTTTAAACTACGCCTCTGCTACGCTTAACACAACCATGCTCAATCTCATTCCAGCCTTTACATTCATACTTGCCTTACTATTCAGGATGGAAAAGCTAAACTGGAGGAGCTCAAGCAGCCAAGCTAAGTCTTTTGGAGCTGTAGTGTCAATTACAGGGGCATTTGTTGTGACTTTCTACAAGGGCCCAGCAGTGATCCACCAACGCTTGTCTTCTGACCCGTTGAGTGGTCCATGTCTCTTCTCACCAAAATCACATTGGGTCCTTGGAGGATCACTCCTAGCCGCTGAGGCATTCATGTCCTCATTATGGATTATTCTGCAGGCCTTAATCCTTAAGAAGTACCCTGCAGTGCTGATCTTAGCCTCCTTCTACTGCTTCTTTGTGACCATACAAGCTGCATTAGCCTCACTGATACTAGTAAAAGACCCAAGTGCTTGGAGTTTAAAACCCAATATTGGTTTGTTTGCAGTTTTATACTCAGCGGTTGTTGGGACTGCGTTACGTACCAGTGCGGTAGCATGGTGCCTGCAGAGAACAGGACCTTTGTATGTTTCTATGTTCAAGCCCCTTGCTGTTGTTGTCGCAGATGTCATTGATGTAATTTTTCTGGGACAAGCTCTGCATCTCGGAAGCTTGGTTGGAGCAGCTGTAATTATCACTGGCTTTTATGCTGTGATATGGGGTAAGGCCAGAGAAGAGAAGTTGCATGAGGACAGTGGAGAAGGGCAGTGGTCAGAATCATCATCTGAAAGCACCCCCCTGCTGCAAAGTGCAAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005887 GO:0005938 GO:0006810 GO:0007154 GO:0007165 GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009987 GO:0010033 GO:0016020 GO:0016021 GO:0022857 GO:0023052 GO:0031224 GO:0031226 GO:0032870 GO:0042221 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071944 GO:0099568

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EamA

Protein Analysis

379

Amino Acids

40.95

Weight (kDa)

9.21

Isoelectric Point (pI)

41.21

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001686)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g34870 FvH4_4g34870 FvH4_4g34870 FvH4_4g34870 FvH4_4g34870 FvH4_4g34870 FvH4_4g34870 FvH4_4g34870
malus_domestica	MD13G1088500.v1.1 MD13G1088700.v1.1 MD16G1088800.v1.1 MD16G1088900.v1.1
prunus_persica	Prupe.1G257200_v2.0.a1 Prupe.1G257300_v2.0.a1 Prupe.1G257400_v2.0.a1 Prupe.1G257500_v2.0.a1 Prupe.1G257600_v2.0.a1 Prupe.1G257700_v2.0.a1
pyrus_communis	pycom13g07640 pycom13g07650 pycom16g07610
rosa_chinensis	RchiOBHm_Chr4g0411271 RchiOBHm_Chr4g0444271 RchiOBHm_Chr4g0444291 RchiOBHm_Chr4g0444301
rosa_laevigata	RLG00000005843
rosa_multiflora	Rmu_sc0002841.1_g000015
rosa_roxburghii	Rroxscaffold_5G00384840 Rroxscaffold_5G00384850
rosa_rugosa	Rorug03G0072000 Rorug03G0072100 Rorug04G0351100 Rorug04G0351200 Rorug04G0351300 Rorug04G0351300 Rorug04G0351300 Rorug04G0351300 Rorug07G0109600
rosa_samantha	Rh1BG171600 Rh4AG412000 Rh4BG070500 Rh4BG423500 Rh4CG078800 Rh4DG418700 Rh4DG418800
rosa_wichuraiana	Rw2G039380 Rw4G013770 Rw4G035390 Rw5G040980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	879
AccBSI	CCGCTC	1 cut(s)	280
AccI	GTMKAC	1 cut(s)	207
AciI	CCGC	4 cut(s)	278, 639, 839, 869
AclWI	GGATC	2 cut(s)	544, 634
AcsI	RAATTY	1 cut(s)	96
AcuI	CTGAAG	1 cut(s)	283
AdeI	CACNNNGTG	1 cut(s)	29
AfaI	GTAC	2 cut(s)	698, 862
AfiI	CCNNNNNNNGG	3 cut(s)	581, 663, 812
AflII	CTTAAG	1 cut(s)	689
AgsI	TTSAA	1 cut(s)	919
AhlI	ACTAGT	2 cut(s)	146, 772
AjnI	CCWGG	1 cut(s)	25
Alw21I	GWGCWC	1 cut(s)	467
Alw26I	GTCTC	1 cut(s)	596
AlwI	GGATC	2 cut(s)	544, 634
AoxI	GGCC	3 cut(s)	538, 678, 1044
ApaI	GGGCCC	1 cut(s)	542
ApeKI	GCWGC	4 cut(s)	471, 752, 1001, 1120
ApoI	RAATTY	1 cut(s)	96
AspS9I	GGNCC	5 cut(s)	538, 539, 584, 616, 896
AsuHPI	GGTGA	3 cut(s)	133, 154, 591
AvaII	GGWCC	3 cut(s)	584, 616, 896
BaeGI	GKGCMC	1 cut(s)	542
BanI	GGYRCC	1 cut(s)	879
BanII	GRGCYC	2 cut(s)	467, 542
BbsI	GAAGAC	2 cut(s)	289, 558
Bbv12I	GWGCWC	1 cut(s)	467
BbvCI	CCTCAGC	1 cut(s)	642
BbvI	GCAGC	4 cut(s)	483, 739, 1013, 1107
BccI	CCATC	2 cut(s)	118, 436
BciT130I	CCWGG	1 cut(s)	27
BcoDI	GTCTC	1 cut(s)	596
BcuI	ACTAGT	2 cut(s)	146, 772
BfaI	CTAG	3 cut(s)	147, 635, 773
BfmI	CTRYAG	4 cut(s)	495, 674, 702, 884
BfrI	CTTAAG	1 cut(s)	689
BglI	GCCNNNNNGGC	1 cut(s)	644
BisI	GCNGC	5 cut(s)	472, 639, 753, 1002, 1121
BlpI	GCTNAGC	1 cut(s)	281
BlsI	GCNGC	5 cut(s)	473, 640, 754, 1003, 1122
Bme1390I	CCNGG	1 cut(s)	27
Bme18I	GGWCC	3 cut(s)	584, 616, 896
BmgT120I	GGNCC	5 cut(s)	538, 539, 584, 616, 896
BmiI	GGNNCC	3 cut(s)	540, 617, 881
BmrFI	CCNGG	1 cut(s)	27
BmsI	GCATC	2 cut(s)	186, 988
BpiI	GAAGAC	2 cut(s)	289, 558
BplI	GAGNNNNNCTC	2 cut(s)	615, 647
BpmI	CTGGAG	1 cut(s)	478
Bpu10I	CCTNAGC	2 cut(s)	138, 642
Bpu1102I	GCTNAGC	1 cut(s)	281
BpuEI	CTTGAG	1 cut(s)	451
BsaAI	YACGTR	1 cut(s)	860
BsaJI	CCNNGG	1 cut(s)	619
BsaXI	ACNNNNNCTCC	4 cut(s)	483, 513, 990, 1020
Bsc4I	CCNNNNNNNGG	3 cut(s)	581, 663, 812
Bse1I	ACTGG	4 cut(s)	123, 461, 864, 1021
BseBI	CCWGG	1 cut(s)	27
BseDI	CCNNGG	1 cut(s)	619
BseGI	GGATG	1 cut(s)	447
BseLI	CCNNNNNNNGG	3 cut(s)	581, 663, 812
BseMII	CTCAG	5 cut(s)	152, 176, 295, 633, 849
BseNI	ACTGG	4 cut(s)	123, 461, 864, 1021
BseRI	GAGGAG	1 cut(s)	475
BseSI	GKGCMC	1 cut(s)	542
BseXI	GCAGC	4 cut(s)	483, 739, 1013, 1107
BseYI	CCCAGC	1 cut(s)	541
BsgI	GTGCAG	1 cut(s)	318
BshFI	GGCC	3 cut(s)	540, 680, 1046
BshNI	GGYRCC	1 cut(s)	879
BsiHKAI	GWGCWC	1 cut(s)	467
BslFI	GGGAC	3 cut(s)	360, 862, 981
BslI	CCNNNNNNNGG	3 cut(s)	581, 663, 812
BsmAI	GTCTC	1 cut(s)	596
BsmFI	GGGAC	3 cut(s)	360, 862, 981
BsmI	GAATGC	1 cut(s)	647
BsnI	GGCC	3 cut(s)	540, 680, 1046
Bsp120I	GGGCCC	1 cut(s)	538
Bsp1286I	GDGCHC	2 cut(s)	467, 542
Bsp143I	GATC	3 cut(s)	549, 626, 711
Bsp1720I	GCTNAGC	1 cut(s)	281
BspACI	CCGC	4 cut(s)	278, 639, 839, 869
BspANI	GGCC	3 cut(s)	540, 680, 1046
BspCNI	CTCAG	5 cut(s)	151, 177, 294, 634, 848
BspLI	GGNNCC	3 cut(s)	540, 617, 881
BspMAI	CTGCAG	3 cut(s)	678, 706, 888
BspPI	GGATC	2 cut(s)	544, 634
BspT107I	GGYRCC	1 cut(s)	879
BspTI	CTTAAG	1 cut(s)	689
BsrBI	CCGCTC	1 cut(s)	280
BsrI	ACTGG	4 cut(s)	123, 461, 864, 1021
BssECI	CCNNGG	1 cut(s)	619
BssMI	GATC	3 cut(s)	549, 626, 711
BssT1I	CCWWGG	1 cut(s)	619
Bst2UI	CCWGG	1 cut(s)	27
Bst4CI	ACNGT	2 cut(s)	339, 1073
Bst6I	CTCTTC	2 cut(s)	599, 1047
BstAFI	CTTAAG	1 cut(s)	689
BstAPI	GCANNNNNTGC	1 cut(s)	134
BstBAI	YACGTR	1 cut(s)	860
BstC8I	GCNNGC	3 cut(s)	34, 678, 884
BstDEI	CTNAG	7 cut(s)	138, 185, 281, 480, 642, 715, 835
BstF5I	GGATG	1 cut(s)	447
BstKTI	GATC	3 cut(s)	552, 629, 714
BstMAI	GTCTC	1 cut(s)	596
BstMBI	GATC	3 cut(s)	549, 626, 711
BstMWI	GCNNNNNNNGC	6 cut(s)	113, 134, 277, 471, 644, 758
BstNI	CCWGG	1 cut(s)	27
BstNSI	RCATGY	1 cut(s)	36
BstSCI	CCNGG	1 cut(s)	25
BstSFI	CTRYAG	4 cut(s)	495, 674, 702, 884
BstSLI	GKGCMC	1 cut(s)	542
BstSNI	TACGTA	1 cut(s)	860
BstV1I	GCAGC	4 cut(s)	483, 739, 1013, 1107
BstV2I	GAAGAC	2 cut(s)	289, 558
BstXI	CCANNNNNNTGG	1 cut(s)	792
BsuRI	GGCC	3 cut(s)	540, 680, 1046
BtsCI	GGATG	1 cut(s)	447
BtsI	GCAGTG	3 cut(s)	552, 711, 1091
BtsIMutI	CAGTG	9 cut(s)	108, 116, 552, 711, 764, 871, 1014, 1078, 1091
Cac8I	GCNNGC	3 cut(s)	34, 678, 884
Cfr13I	GGNCC	5 cut(s)	538, 539, 584, 616, 896
CseI	GACGC	1 cut(s)	260
CsiI	ACCWGGT	1 cut(s)	25
Csp6I	GTAC	2 cut(s)	697, 861
CviAII	CATG	8 cut(s)	33, 85, 172, 391, 588, 652, 876, 1064
CviQI	GTAC	2 cut(s)	697, 861
DdeI	CTNAG	7 cut(s)	138, 185, 281, 480, 642, 715, 835
DpnI	GATC	3 cut(s)	551, 628, 713
DpnII	GATC	3 cut(s)	549, 626, 711
DraI	TTTAAA	2 cut(s)	360, 801
DraIII	CACNNNGTG	1 cut(s)	29
Eam1104I	CTCTTC	2 cut(s)	599, 1047
EarI	CTCTTC	2 cut(s)	599, 1047
Ecl136II	GAGCTC	1 cut(s)	465
Eco105I	TACGTA	1 cut(s)	860
Eco130I	CCWWGG	1 cut(s)	619
Eco147I	AGGCCT	1 cut(s)	680
Eco24I	GRGCYC	2 cut(s)	467, 542
Eco47I	GGWCC	3 cut(s)	584, 616, 896
Eco53kI	GAGCTC	1 cut(s)	465
Eco57I	CTGAAG	1 cut(s)	283
EcoICRI	GAGCTC	1 cut(s)	465
EcoO109I	RGGNCCY	3 cut(s)	538, 616, 896
EcoRII	CCWGG	1 cut(s)	25
EcoT14I	CCWWGG	1 cut(s)	619
EcoT38I	GRGCYC	2 cut(s)	467, 542
ErhI	CCWWGG	1 cut(s)	619
FaeI	CATG	8 cut(s)	36, 88, 175, 394, 591, 655, 879, 1067
FaqI	GGGAC	3 cut(s)	360, 862, 981
FatI	CATG	8 cut(s)	32, 84, 171, 390, 587, 651, 875, 1063
FblI	GTMKAC	1 cut(s)	207
Fnu4HI	GCNGC	5 cut(s)	472, 639, 753, 1002, 1121
FokI	GGATG	1 cut(s)	454
FriOI	GRGCYC	2 cut(s)	467, 542
Fsp4HI	GCNGC	5 cut(s)	472, 639, 753, 1002, 1121
FspBI	CTAG	3 cut(s)	147, 635, 773
GluI	GCNGC	5 cut(s)	472, 639, 753, 1002, 1121
GsaI	CCCAGC	1 cut(s)	545
GsuI	CTGGAG	1 cut(s)	478
HaeIII	GGCC	3 cut(s)	540, 680, 1046
HgaI	GACGC	1 cut(s)	260
Hin1II	CATG	8 cut(s)	36, 88, 175, 394, 591, 655, 879, 1067
HindIII	AAGCTT	1 cut(s)	988
HinfI	GANTC	1 cut(s)	1094
HphI	GGTGA	3 cut(s)	133, 154, 591
Hpy166II	GTNNAC	1 cut(s)	208
Hpy188I	TCNGA	5 cut(s)	182, 571, 986, 1093, 1105
Hpy188III	TCNNGA	1 cut(s)	439
Hpy8I	GTNNAC	1 cut(s)	208
HpyAV	CCTTC	6 cut(s)	85, 86, 252, 259, 733, 1073
HpyCH4III	ACNGT	2 cut(s)	339, 1073
HpyCH4IV	ACGT	1 cut(s)	859
HpyF10VI	GCNNNNNNNGC	6 cut(s)	113, 134, 277, 471, 644, 758
HpyF3I	CTNAG	7 cut(s)	138, 185, 281, 480, 642, 715, 835
HpySE526I	ACGT	1 cut(s)	859
Hsp92II	CATG	8 cut(s)	36, 88, 175, 394, 591, 655, 879, 1067
Kzo9I	GATC	3 cut(s)	549, 626, 711
LmnI	GCTCC	3 cut(s)	462, 491, 998
Lsp1109I	GCAGC	4 cut(s)	483, 739, 1013, 1107
LweI	GCATC	2 cut(s)	186, 988
MabI	ACCWGGT	1 cut(s)	25
MaeI	CTAG	3 cut(s)	147, 635, 773
MaeII	ACGT	1 cut(s)	859
MaeIII	GTNAC	5 cut(s)	9, 142, 523, 739, 855
MalI	GATC	3 cut(s)	551, 628, 713
MbiI	CCGCTC	1 cut(s)	280
MboI	GATC	3 cut(s)	549, 626, 711
MboII	GAAGA	6 cut(s)	237, 289, 298, 558, 586, 1064
MhlI	GDGCHC	2 cut(s)	467, 542
MluCI	AATT	4 cut(s)	96, 504, 957, 1008
MmeI	TCCRAC	1 cut(s)	976
MnlI	CCTC	9 cut(s)	285, 379, 453, 617, 637, 667, 730, 772, 1060
MseI	TTAA	6 cut(s)	341, 359, 381, 683, 690, 800
MslI	CAYNNNNRTG	1 cut(s)	389
MspA1I	CMGCKG	3 cut(s)	641, 839, 1004
MspCI	CTTAAG	1 cut(s)	689
MspR9I	CCNGG	1 cut(s)	27
MssI	GTTTAAAC	1 cut(s)	360
Mva1269I	GAATGC	1 cut(s)	647
MvaI	CCWGG	1 cut(s)	27
MwoI	GCNNNNNNNGC	6 cut(s)	113, 134, 277, 471, 644, 758
NdeII	GATC	3 cut(s)	549, 626, 711
NlaIII	CATG	8 cut(s)	36, 88, 175, 394, 591, 655, 879, 1067
NlaIV	GGNNCC	3 cut(s)	540, 617, 881
NmuCI	GTSAC	4 cut(s)	9, 142, 523, 739
NspI	RCATGY	1 cut(s)	36
PaeI	GCATGC	1 cut(s)	36
PceI	AGGCCT	1 cut(s)	680
PctI	GAATGC	1 cut(s)	647
PfeI	GAWTC	1 cut(s)	1094
PkrI	GCNGC	5 cut(s)	473, 640, 754, 1003, 1122
PmeI	GTTTAAAC	1 cut(s)	360
Ppu21I	YACGTR	1 cut(s)	860
PpuMI	RGGWCCY	2 cut(s)	616, 896
Psp124BI	GAGCTC	1 cut(s)	467
Psp5II	RGGWCCY	2 cut(s)	616, 896
Psp6I	CCWGG	1 cut(s)	25
PspFI	CCCAGC	1 cut(s)	541
PspGI	CCWGG	1 cut(s)	25
PspN4I	GGNNCC	3 cut(s)	540, 617, 881
PspOMI	GGGCCC	1 cut(s)	538
PspPI	GGNCC	5 cut(s)	538, 539, 584, 616, 896
PspPPI	RGGWCCY	2 cut(s)	616, 896
PstI	CTGCAG	3 cut(s)	678, 706, 888
PvuII	CAGCTG	1 cut(s)	1004
RsaI	GTAC	2 cut(s)	698, 862
RsaNI	GTAC	2 cut(s)	697, 861
RseI	CAYNNNNRTG	1 cut(s)	389
SacI	GAGCTC	1 cut(s)	467
SaqAI	TTAA	6 cut(s)	341, 359, 381, 683, 690, 800
SatI	GCNGC	5 cut(s)	472, 639, 753, 1002, 1121
Sau3AI	GATC	3 cut(s)	549, 626, 711
Sau96I	GGNCC	5 cut(s)	538, 539, 584, 616, 896
ScrFI	CCNGG	1 cut(s)	27
SduI	GDGCHC	2 cut(s)	467, 542
SexAI	ACCWGGT	1 cut(s)	25
SfaNI	GCATC	2 cut(s)	186, 988
SfcI	CTRYAG	4 cut(s)	495, 674, 702, 884
SinI	GGWCC	3 cut(s)	584, 616, 896
SmiMI	CAYNNNNRTG	1 cut(s)	389
SmlI	CTYRAG	2 cut(s)	466, 689
SmoI	CTYRAG	2 cut(s)	466, 689
SnaBI	TACGTA	1 cut(s)	860
SpeI	ACTAGT	2 cut(s)	146, 772
SphI	GCATGC	1 cut(s)	36
Sse9I	AATT	4 cut(s)	96, 504, 957, 1008
SseBI	AGGCCT	1 cut(s)	680
SsiI	CCGC	4 cut(s)	278, 639, 839, 869
SspI	AATATT	1 cut(s)	811
SspMI	CTAG	3 cut(s)	147, 635, 773
SstI	GAGCTC	1 cut(s)	467
StuI	AGGCCT	1 cut(s)	680
StyD4I	CCNGG	1 cut(s)	25
StyI	CCWWGG	1 cut(s)	619
TaaI	ACNGT	2 cut(s)	339, 1073
TaiI	ACGT	1 cut(s)	862
TasI	AATT	4 cut(s)	96, 504, 957, 1008
TauI	GCSGC	1 cut(s)	641
TfiI	GAWTC	1 cut(s)	1094
Tru1I	TTAA	6 cut(s)	341, 359, 381, 683, 690, 800
Tru9I	TTAA	6 cut(s)	341, 359, 381, 683, 690, 800
TscAI	CASTG	9 cut(s)	108, 123, 552, 711, 771, 871, 1021, 1078, 1091
TseFI	GTSAC	4 cut(s)	9, 142, 523, 739
TseI	GCWGC	4 cut(s)	471, 752, 1001, 1120
Tsp45I	GTSAC	4 cut(s)	9, 142, 523, 739
TspDTI	ATGAA	3 cut(s)	241, 409, 640
TspRI	CASTG	9 cut(s)	108, 123, 552, 711, 771, 871, 1021, 1078, 1091
Vha464I	CTTAAG	1 cut(s)	689
VpaK11BI	GGWCC	3 cut(s)	584, 616, 896
XapI	RAATTY	1 cut(s)	96
XceI	RCATGY	1 cut(s)	36
XcmI	CCANNNNNNNNNTGG	1 cut(s)	609
XmiI	GTMKAC	1 cut(s)	207
XspI	CTAG	3 cut(s)	147, 635, 773

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.