Prupe.1G398700_v2.0.a1

Zinc finger protein CONSTANS-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
35275776 .. 35277577
1802 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G398700.1

Sequence Viewer

Length: 1032 bp
ATGGCGTCGAAGCTCTGTGACTCGTGCAAATCGGCGACGGCGACTCTGTTCTGCCGAGCTGACTCAGCCTTCCTCTGCGTCAACTGTGACTCCAAGATCCACGCCGCCAACAAGCTCGCTTCCCGCCACGCCCGAGTCTGGCTCTGCGAGGTCTGCGAGCAAGCCCCCGCTCACGTAACGTGCAAGGCCGACGACGCCGCTCTCTGCGTCACGTGTGATCGAGACATCCACTCGGCCAACCCTCTTAGTCGCCGCCACGAGCGAGTCCCCGTGACGCCCTTCTACGACTCGGGTAACTCGGCCGCCAACTCAGCCCCCGTCGTCAAATCTGTTGTCAACTTCCTCGACGACCGTTACTTCTCCGACGTGGACGGTCAAGACGCAGAGACTGAGGTGAGCAGGGAAGAGGCCGAGGCTGCTTCGTGGCTGCTCCCAAATCCGAAGGCAATGGAGAATCCGGATCTGAACTCGGGCGAGTACTTTCTCCCGGAAATGGATCCGTATTTGGATCTGGACTACGGGCATGTGGATCCGAAGCTTGAAGATGCTCAGGAGCAGAACAGTTGCGGTACAGACGGCGTCGTGCCGGTTCAGAGCAAAAGCGTTCAGCCTCAGCTCGTCAATGACCACAGCTTCGAAATTGACTTCTCCGCCGCGTCCAAGCCATACGTCTATGGCTTCCACGCTCAGTGTCTGAGCCAGAGTGTATCATCGTCGTCTATGGACGTTAGCGTTGTGCCAGATGGCAACACGACGATGACGGACGTGTGCGATCCTTACACCAAGTCAATGAGCGCGGCGGTGGAGTCAACACATCAGGCGGTTCAGATTTCATCGGCTGATCGCGAAGCGAGGGTGTTGAGGTACAGAGAGAAGCGAAAGAACCGAAAGTTCGAGAAGACGATACGTTACGCTTCGAGGAAAGCGTATGCGGAGACGAGACCGCGAATCAAAGGCAGGTTCGCTAAGCGCACAGAAGTGGAAATCGAAGCGGAACGTCTGTGCCGGTACGGCGTCGTTCCGTCGTTCTAG

Protein Analysis

344

Amino Acids

38.06

Weight (kDa)

5.56

Isoelectric Point (pI)

43.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 948
AccBSI CCGCTC 2 cut(s) 170, 200
AccII CGCG 4 cut(s) 656, 797, 846, 946
AccIII TCCGGA 1 cut(s) 457
AclWI GGATC 8 cut(s) 91, 468, 491, 504, 516, 524, 537, 767
AcoI YGGCCR 2 cut(s) 234, 300
AcvI CACGTG 1 cut(s) 213
AcyI GRCGYC 5 cut(s) 5, 195, 275, 579, 1014
AfaI GTAC 4 cut(s) 479, 571, 866, 1010
AfiI CCNNNNNNNGG 2 cut(s) 138, 493
AflIII ACRYGT 2 cut(s) 212, 765
AgsI TTSAA 1 cut(s) 542
AjiI CACGTC 2 cut(s) 367, 766
AleI CACNNNNGTG 1 cut(s) 977
AluBI AGCT 6 cut(s) 13, 59, 115, 538, 616, 633
AluI AGCT 6 cut(s) 13, 59, 115, 538, 616, 633
Alw26I GTCTC 4 cut(s) 216, 380, 929, 934
AlwI GGATC 8 cut(s) 91, 468, 491, 504, 516, 524, 537, 767
AlwNI CAGNNNCTG 2 cut(s) 389, 694
Ama87I CYCGRG 3 cut(s) 132, 289, 469
Aor13HI TCCGGA 1 cut(s) 457
AoxI GGCC 4 cut(s) 186, 234, 300, 408
ApeKI GCWGC 2 cut(s) 416, 427
ArsI GACNNNNNNTTYG 4 cut(s) 318, 350, 617, 649
AspLEI GCGC 2 cut(s) 797, 972
AsuC2I CCSGG 1 cut(s) 488
AsuHPI GGTGA 1 cut(s) 406
AsuII TTCGAA 1 cut(s) 636
AvaI CYCGRG 3 cut(s) 132, 289, 469
BamHI GGATCC 2 cut(s) 496, 529
BauI CACGAG 2 cut(s) 22, 257
BbrPI CACGTG 1 cut(s) 213
BbsI GAAGAC 1 cut(s) 905
BbvCI CCTCAGC 1 cut(s) 612
BbvI GCAGC 2 cut(s) 403, 414
BccI CCATC 1 cut(s) 737
BceAI ACGGC 3 cut(s) 54, 592, 1027
BcnI CCSGG 1 cut(s) 488
BcoDI GTCTC 4 cut(s) 216, 380, 929, 934
BfaI CTAG 1 cut(s) 1030
BfuAI ACCTGC 1 cut(s) 948
BglI GCCNNNNNGGC 1 cut(s) 1011
BisI GCNGC 8 cut(s) 105, 198, 253, 303, 417, 428, 654, 798
BlpI GCTNAGC 1 cut(s) 966
BlsI GCNGC 8 cut(s) 106, 199, 254, 304, 418, 429, 655, 799
BmcAI AGTACT 1 cut(s) 479
Bme1390I CCNGG 1 cut(s) 488
BmeT110I CYCGRG 3 cut(s) 132, 289, 469
BmgBI CACGTC 2 cut(s) 367, 766
BmiI GGNNCC 2 cut(s) 498, 531
BmrFI CCNGG 1 cut(s) 488
BmsI GCATC 1 cut(s) 535
BpiI GAAGAC 1 cut(s) 905
BplI GAGNNNNNCTC 2 cut(s) 126, 158
Bpu10I CCTNAGC 2 cut(s) 549, 612
Bpu1102I GCTNAGC 1 cut(s) 966
Bpu14I TTCGAA 1 cut(s) 636
BpuMI CCSGG 1 cut(s) 488
BsaAI YACGTR 2 cut(s) 175, 213
BsaHI GRCGYC 5 cut(s) 5, 195, 275, 579, 1014
BsaI GGTCTC 1 cut(s) 934
BsaJI CCNNGG 1 cut(s) 411
BsaWI WCCGGW 1 cut(s) 457
BsaXI ACNNNNNCTCC 2 cut(s) 74, 104
Bsc4I CCNNNNNNNGG 2 cut(s) 138, 493
Bse118I RCCGGY 2 cut(s) 586, 1005
Bse3DI GCAATG 1 cut(s) 453
BseAI TCCGGA 1 cut(s) 457
BseDI CCNNGG 1 cut(s) 411
BseGI GGATG 1 cut(s) 225
BseLI CCNNNNNNNGG 2 cut(s) 138, 493
BseMI GCAATG 1 cut(s) 453
BseMII CTCAG 7 cut(s) 78, 324, 381, 563, 626, 686, 701
BseX3I CGGCCG 1 cut(s) 300
BseXI GCAGC 2 cut(s) 403, 414
Bsh1236I CGCG 4 cut(s) 656, 797, 846, 946
Bsh1285I CGRYCG 2 cut(s) 303, 352
BshFI GGCC 4 cut(s) 188, 236, 302, 410
BsiEI CGRYCG 2 cut(s) 303, 352
BsiHKCI CYCGRG 3 cut(s) 132, 289, 469
BsiSI CCGG 4 cut(s) 458, 488, 587, 1006
BslFI GGGAC 1 cut(s) 251
BslI CCNNNNNNNGG 2 cut(s) 138, 493
BsmAI GTCTC 4 cut(s) 216, 380, 929, 934
BsmBI CGTCTC 1 cut(s) 929
BsmFI GGGAC 1 cut(s) 251
BsnI GGCC 4 cut(s) 188, 236, 302, 410
Bso31I GGTCTC 1 cut(s) 934
BsoBI CYCGRG 3 cut(s) 132, 289, 469
Bsp119I TTCGAA 1 cut(s) 636
Bsp13I TCCGGA 1 cut(s) 457
Bsp143I GATC 8 cut(s) 96, 217, 460, 496, 508, 529, 772, 841
Bsp1720I GCTNAGC 1 cut(s) 966
Bsp68I TCGCGA 1 cut(s) 846
BspANI GGCC 4 cut(s) 188, 236, 302, 410
BspCNI CTCAG 7 cut(s) 77, 323, 382, 562, 625, 687, 700
BspEI TCCGGA 1 cut(s) 457
BspFNI CGCG 4 cut(s) 656, 797, 846, 946
BspLI GGNNCC 2 cut(s) 498, 531
BspMI ACCTGC 1 cut(s) 948
BspPI GGATC 8 cut(s) 91, 468, 491, 504, 516, 524, 537, 767
BspT104I TTCGAA 1 cut(s) 636
BspTNI GGTCTC 1 cut(s) 934
BsrBI CCGCTC 2 cut(s) 170, 200
BsrDI GCAATG 1 cut(s) 453
BsrFI RCCGGY 2 cut(s) 586, 1005
BssAI RCCGGY 2 cut(s) 586, 1005
BssECI CCNNGG 1 cut(s) 411
BssMI GATC 8 cut(s) 96, 217, 460, 496, 508, 529, 772, 841
BssNI GRCGYC 5 cut(s) 5, 195, 275, 579, 1014
BssSI CACGAG 2 cut(s) 22, 257
Bst2BI CACGAG 2 cut(s) 22, 257
Bst4CI ACNGT 4 cut(s) 86, 353, 374, 563
Bst6I CTCTTC 1 cut(s) 399
BstACI GRCGYC 5 cut(s) 5, 195, 275, 579, 1014
BstBAI YACGTR 2 cut(s) 175, 213
BstBI TTCGAA 1 cut(s) 636
BstC8I GCNNGC 3 cut(s) 117, 158, 162
BstDEI CTNAG 9 cut(s) 64, 245, 310, 390, 549, 612, 687, 695, 966
BstF5I GGATG 1 cut(s) 225
BstFNI CGCG 4 cut(s) 656, 797, 846, 946
BstHHI GCGC 2 cut(s) 797, 972
BstKTI GATC 8 cut(s) 99, 220, 463, 499, 511, 532, 775, 844
BstMAI GTCTC 4 cut(s) 216, 380, 929, 934
BstMBI GATC 8 cut(s) 96, 217, 460, 496, 508, 529, 772, 841
BstMCI CGRYCG 2 cut(s) 303, 352
BstMWI GCNNNNNNNGC 6 cut(s) 65, 153, 194, 311, 416, 1011
BstNSI RCATGY 1 cut(s) 527
BstSCI CCNGG 1 cut(s) 486
BstUI CGCG 4 cut(s) 656, 797, 846, 946
BstV1I GCAGC 2 cut(s) 403, 414
BstV2I GAAGAC 1 cut(s) 905
BstX2I RGATCY 5 cut(s) 96, 460, 496, 508, 529
BstYI RGATCY 5 cut(s) 96, 460, 496, 508, 529
BstZI CGGCCG 1 cut(s) 300
BsuRI GGCC 4 cut(s) 188, 236, 302, 410
BtrI CACGTC 2 cut(s) 367, 766
BtsCI GGATG 1 cut(s) 225
BtsIMutI CAGTG 1 cut(s) 695
BtuMI TCGCGA 1 cut(s) 846
BveI ACCTGC 1 cut(s) 948
Cac8I GCNNGC 3 cut(s) 117, 158, 162
CaiI CAGNNNCTG 2 cut(s) 389, 694
CfoI GCGC 2 cut(s) 797, 972
Cfr10I RCCGGY 2 cut(s) 586, 1005
CseI GACGC 8 cut(s) 67, 196, 203, 283, 389, 568, 645, 1003
Csp6I GTAC 4 cut(s) 478, 570, 865, 1009
CviAII CATG 1 cut(s) 524
CviQI GTAC 4 cut(s) 478, 570, 865, 1009
DdeI CTNAG 9 cut(s) 64, 245, 310, 390, 549, 612, 687, 695, 966
DpnI GATC 8 cut(s) 98, 219, 462, 498, 510, 531, 774, 843
DpnII GATC 8 cut(s) 96, 217, 460, 496, 508, 529, 772, 841
EaeI YGGCCR 2 cut(s) 234, 300
EagI CGGCCG 1 cut(s) 300
Eam1104I CTCTTC 1 cut(s) 399
EarI CTCTTC 1 cut(s) 399
EciI GGCGGA 1 cut(s) 640
EclXI CGGCCG 1 cut(s) 300
Eco31I GGTCTC 1 cut(s) 934
Eco52I CGGCCG 1 cut(s) 300
Eco72I CACGTG 1 cut(s) 213
Eco88I CYCGRG 3 cut(s) 132, 289, 469
Esp3I CGTCTC 1 cut(s) 929
FaeI CATG 1 cut(s) 527
FaiI YATR 5 cut(s) 525, 667, 675, 722, 930
FaqI GGGAC 1 cut(s) 251
FatI CATG 1 cut(s) 523
FauI CCCGC 2 cut(s) 131, 175
Fnu4HI GCNGC 8 cut(s) 105, 198, 253, 303, 417, 428, 654, 798
FokI GGATG 1 cut(s) 212
Fsp4HI GCNGC 8 cut(s) 105, 198, 253, 303, 417, 428, 654, 798
FspBI CTAG 1 cut(s) 1030
GlaI GCGC 2 cut(s) 796, 971
GluI GCNGC 8 cut(s) 105, 198, 253, 303, 417, 428, 654, 798
HaeIII GGCC 4 cut(s) 188, 236, 302, 410
HapII CCGG 4 cut(s) 458, 488, 587, 1006
HgaI GACGC 8 cut(s) 67, 196, 203, 283, 389, 568, 645, 1003
HhaI GCGC 2 cut(s) 797, 972
Hin1I GRCGYC 5 cut(s) 5, 195, 275, 579, 1014
Hin1II CATG 1 cut(s) 527
Hin6I GCGC 2 cut(s) 795, 970
HinP1I GCGC 2 cut(s) 795, 970
HincII GTYRAC 3 cut(s) 82, 337, 810
HindII GTYRAC 3 cut(s) 82, 337, 810
HindIII AAGCTT 1 cut(s) 536
HpaII CCGG 4 cut(s) 458, 488, 587, 1006
HphI GGTGA 1 cut(s) 406
Hpy166II GTNNAC 4 cut(s) 82, 337, 370, 810
Hpy188I TCNGA 7 cut(s) 364, 441, 465, 534, 594, 696, 828
Hpy188III TCNNGA 7 cut(s) 221, 377, 458, 512, 551, 845, 895
Hpy8I GTNNAC 4 cut(s) 82, 337, 370, 810
HpyAV CCTTC 3 cut(s) 79, 289, 436
HpyCH4III ACNGT 4 cut(s) 86, 353, 374, 563
HpyCH4IV ACGT 9 cut(s) 174, 179, 212, 366, 669, 726, 765, 907, 997
HpyCH4V TGCA 2 cut(s) 27, 183
HpyF10VI GCNNNNNNNGC 6 cut(s) 65, 153, 194, 311, 416, 1011
HpyF3I CTNAG 9 cut(s) 64, 245, 310, 390, 549, 612, 687, 695, 966
HpySE526I ACGT 9 cut(s) 174, 179, 212, 366, 669, 726, 765, 907, 997
Hsp92I GRCGYC 5 cut(s) 5, 195, 275, 579, 1014
Hsp92II CATG 1 cut(s) 527
HspAI GCGC 2 cut(s) 795, 970
Kpn2I TCCGGA 1 cut(s) 457
Kzo9I GATC 8 cut(s) 96, 217, 460, 496, 508, 529, 772, 841
LmnI GCTCC 2 cut(s) 435, 553
Lsp1109I GCAGC 2 cut(s) 403, 414
LweI GCATC 1 cut(s) 535
MaeI CTAG 1 cut(s) 1030
MaeII ACGT 9 cut(s) 174, 179, 212, 366, 669, 726, 765, 907, 997
MaeIII GTNAC 8 cut(s) 17, 86, 175, 208, 271, 293, 353, 908
MalI GATC 8 cut(s) 98, 219, 462, 498, 510, 531, 774, 843
MbiI CCGCTC 2 cut(s) 170, 200
MboI GATC 8 cut(s) 96, 217, 460, 496, 508, 529, 772, 841
MboII GAAGA 3 cut(s) 416, 554, 910
MflI RGATCY 5 cut(s) 96, 460, 496, 508, 529
MluCI AATT 1 cut(s) 639
MlyI GAGTC 8 cut(s) 14, 37, 56, 83, 144, 273, 281, 815
MmeI TCCRAC 1 cut(s) 387
MroI TCCGGA 1 cut(s) 457
MslI CAYNNNNRTG 2 cut(s) 755, 977
MspI CCGG 4 cut(s) 458, 488, 587, 1006
MspR9I CCNGG 1 cut(s) 488
MvnI CGCG 4 cut(s) 656, 797, 846, 946
MwoI GCNNNNNNNGC 6 cut(s) 65, 153, 194, 311, 416, 1011
NciI CCSGG 1 cut(s) 488
NdeII GATC 8 cut(s) 96, 217, 460, 496, 508, 529, 772, 841
NlaIII CATG 1 cut(s) 527
NlaIV GGNNCC 2 cut(s) 498, 531
NmeAIII GCCGAG 4 cut(s) 80, 212, 278, 436
NmuCI GTSAC 4 cut(s) 17, 86, 208, 271
NruI TCGCGA 1 cut(s) 846
NspI RCATGY 1 cut(s) 527
NspV TTCGAA 1 cut(s) 636
OliI CACNNNNGTG 1 cut(s) 977
PcsI WCGNNNNNNNCGW 2 cut(s) 38, 923
PfeI GAWTC 2 cut(s) 454, 948
PflFI GACNNNGTC 1 cut(s) 578
PfoI TCCNGGA 1 cut(s) 486
PkrI GCNGC 8 cut(s) 106, 199, 254, 304, 418, 429, 655, 799
PleI GAGTC 8 cut(s) 14, 37, 56, 83, 143, 272, 281, 814
PmaCI CACGTG 1 cut(s) 213
PmlI CACGTG 1 cut(s) 213
PpsI GAGTC 8 cut(s) 14, 37, 56, 83, 143, 272, 281, 814
Ppu21I YACGTR 2 cut(s) 175, 213
PspCI CACGTG 1 cut(s) 213
PspN4I GGNNCC 2 cut(s) 498, 531
PstNI CAGNNNCTG 2 cut(s) 389, 694
PsuI RGATCY 5 cut(s) 96, 460, 496, 508, 529
PsyI GACNNNGTC 1 cut(s) 578
RruI TCGCGA 1 cut(s) 846
RsaI GTAC 4 cut(s) 479, 571, 866, 1010
RsaNI GTAC 4 cut(s) 478, 570, 865, 1009
RseI CAYNNNNRTG 2 cut(s) 755, 977
SatI GCNGC 8 cut(s) 105, 198, 253, 303, 417, 428, 654, 798
Sau3AI GATC 8 cut(s) 96, 217, 460, 496, 508, 529, 772, 841
ScaI AGTACT 1 cut(s) 479
SchI GAGTC 8 cut(s) 14, 37, 56, 83, 144, 273, 281, 815
ScrFI CCNGG 1 cut(s) 488
SfaNI GCATC 1 cut(s) 535
SfuI TTCGAA 1 cut(s) 636
SmiMI CAYNNNNRTG 2 cut(s) 755, 977
Sse9I AATT 1 cut(s) 639
SspMI CTAG 1 cut(s) 1030
StyD4I CCNGG 1 cut(s) 486
TaaI ACNGT 4 cut(s) 86, 353, 374, 563
TaiI ACGT 9 cut(s) 177, 182, 215, 369, 672, 729, 768, 910, 1000
TaqI TCGA 7 cut(s) 8, 220, 345, 636, 894, 917, 987
TasI AATT 1 cut(s) 639
TatI WGTACW 1 cut(s) 477
TauI GCSGC 6 cut(s) 107, 200, 255, 305, 656, 800
TfiI GAWTC 2 cut(s) 454, 948
TscAI CASTG 1 cut(s) 695
TseFI GTSAC 4 cut(s) 17, 86, 208, 271
TseI GCWGC 2 cut(s) 416, 427
Tsp45I GTSAC 4 cut(s) 17, 86, 208, 271
TspDTI ATGAA 1 cut(s) 822
TspGWI ACGGA 3 cut(s) 489, 776, 1011
TspRI CASTG 1 cut(s) 695
Tth111I GACNNNGTC 1 cut(s) 578
XceI RCATGY 1 cut(s) 527
XspI CTAG 1 cut(s) 1030
ZrmI AGTACT 1 cut(s) 479
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.