Zinc finger protein CONSTANS-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G24930 |
| fragaria_vesca | FvH4_2g41420 FvH4_2g41420 |
| malus_domestica | MD08G1049600.v1.1 MD15G1045000.v1.1 |
| prunus_persica | Prupe.1G019200_v2.0.a1 Prupe.1G398700_v2.0.a1 Prupe.1G398700_v2.0.a1 |
| pyrus_communis | pycom01g05670 pycom08g04150 pycom15g04180 |
| rosa_chinensis | RchiOBHm_Chr3g0493071 RchiOBHm_Chr4g0429731 RchiOBHm_Chr4g0429741 RchiOBHm_Chr5g0033381 RchiOBHm_Chr5g0037591 RchiOBHm_Chr5g0068911 RchiOBHm_Chr5g0068921 RchiOBHm_Chr6g0299051 |
| rosa_laevigata | RLG00000011466 RLG00000027505 RLG00000031917 RLG00000032258 |
| rosa_multiflora | Rmu_co8169200.1_g000001 Rmu_co8181194.1_g000001 Rmu_sc0000981.1_g000006 |
| rosa_roxburghii | Rroxscaffold_7G00169050 |
| rosa_rugosa | Rorug06G0219600 Rorug06G0284400 |
| rosa_samantha | Rh3AG308000 Rh3CG322500 Rh3DG321400 Rh5AG231500 Rh5AG254900 Rh6AG395900 Rh6BG404500 Rh6CG410500 Rh6DG397100 |
| rosa_wichuraiana | Rw4G030090 Rw6G034650 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 566, 730 |
| Acc36I | ACCTGC | 1 cut(s) | 906 |
| AccII | CGCG | 1 cut(s) | 877 |
| AcoI | YGGCCR | 1 cut(s) | 652 |
| AcsI | RAATTY | 1 cut(s) | 451 |
| AcvI | CACGTG | 2 cut(s) | 180, 213 |
| AcyI | GRCGYC | 2 cut(s) | 195, 972 |
| AfaI | GTAC | 2 cut(s) | 556, 824 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 133, 138 |
| AflIII | ACRYGT | 1 cut(s) | 465 |
| AgsI | TTSAA | 1 cut(s) | 608 |
| AjiI | CACGTC | 1 cut(s) | 175 |
| AjnI | CCWGG | 1 cut(s) | 619 |
| AluBI | AGCT | 6 cut(s) | 13, 115, 524, 603, 809, 884 |
| AluI | AGCT | 6 cut(s) | 13, 115, 524, 603, 809, 884 |
| Alw26I | GTCTC | 6 cut(s) | 363, 369, 377, 887, 892, 962 |
| Ama87I | CYCGRG | 1 cut(s) | 132 |
| AoxI | GGCC | 3 cut(s) | 186, 273, 652 |
| ApeKI | GCWGC | 4 cut(s) | 104, 329, 416, 427 |
| ApoI | RAATTY | 1 cut(s) | 451 |
| AspLEI | GCGC | 1 cut(s) | 930 |
| AspS9I | GGNCC | 2 cut(s) | 274, 568 |
| AsuC2I | CCSGG | 3 cut(s) | 133, 134, 269 |
| AsuHPI | GGTGA | 1 cut(s) | 733 |
| AvaI | CYCGRG | 1 cut(s) | 132 |
| AvaII | GGWCC | 1 cut(s) | 568 |
| AxyI | CCTNAGG | 1 cut(s) | 441 |
| BalI | TGGCCA | 1 cut(s) | 654 |
| BamHI | GGATCC | 3 cut(s) | 481, 514, 623 |
| BauI | CACGAG | 2 cut(s) | 22, 257 |
| BbrPI | CACGTG | 2 cut(s) | 180, 213 |
| BbsI | GAAGAC | 1 cut(s) | 863 |
| BbvCI | CCTCAGC | 1 cut(s) | 245 |
| BbvI | GCAGC | 4 cut(s) | 116, 316, 403, 414 |
| BccI | CCATC | 1 cut(s) | 704 |
| BceAI | ACGGC | 4 cut(s) | 54, 299, 317, 985 |
| BciT130I | CCWGG | 1 cut(s) | 621 |
| BcnI | CCSGG | 3 cut(s) | 133, 134, 269 |
| BcoDI | GTCTC | 6 cut(s) | 363, 369, 377, 887, 892, 962 |
| BfaI | CTAG | 1 cut(s) | 810 |
| BfuAI | ACCTGC | 1 cut(s) | 906 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 969 |
| BisI | GCNGC | 6 cut(s) | 105, 250, 330, 417, 428, 964 |
| BlpI | GCTNAGC | 1 cut(s) | 924 |
| BlsI | GCNGC | 6 cut(s) | 106, 251, 331, 418, 429, 965 |
| Bme1390I | CCNGG | 4 cut(s) | 133, 134, 269, 621 |
| Bme18I | GGWCC | 1 cut(s) | 568 |
| BmeT110I | CYCGRG | 1 cut(s) | 132 |
| BmgBI | CACGTC | 1 cut(s) | 175 |
| BmgT120I | GGNCC | 2 cut(s) | 274, 568 |
| BmiI | GGNNCC | 6 cut(s) | 165, 276, 483, 516, 570, 625 |
| BmrFI | CCNGG | 4 cut(s) | 133, 134, 269, 621 |
| BmsI | GCATC | 4 cut(s) | 14, 316, 781, 881 |
| BoxI | GACNNNNGTC | 1 cut(s) | 392 |
| BpiI | GAAGAC | 1 cut(s) | 863 |
| Bpu10I | CCTNAGC | 1 cut(s) | 245 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 924 |
| BpuMI | CCSGG | 3 cut(s) | 133, 134, 269 |
| BsaAI | YACGTR | 3 cut(s) | 180, 213, 466 |
| BsaHI | GRCGYC | 2 cut(s) | 195, 972 |
| BsaI | GGTCTC | 1 cut(s) | 892 |
| BsaJI | CCNNGG | 3 cut(s) | 132, 411, 649 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 455, 485 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 133, 138 |
| Bse118I | RCCGGY | 1 cut(s) | 252 |
| Bse21I | CCTNAGG | 1 cut(s) | 441 |
| BseBI | CCWGG | 1 cut(s) | 621 |
| BseDI | CCNNGG | 3 cut(s) | 132, 411, 649 |
| BseGI | GGATG | 3 cut(s) | 680, 697, 772 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 133, 138 |
| BseMII | CTCAG | 3 cut(s) | 259, 381, 545 |
| BseRI | GAGGAG | 1 cut(s) | 551 |
| BseXI | GCAGC | 4 cut(s) | 116, 316, 403, 414 |
| Bsh1236I | CGCG | 1 cut(s) | 877 |
| Bsh1285I | CGRYCG | 2 cut(s) | 220, 756 |
| BshFI | GGCC | 3 cut(s) | 188, 275, 654 |
| BsiEI | CGRYCG | 2 cut(s) | 220, 756 |
| BsiHKCI | CYCGRG | 1 cut(s) | 132 |
| BsiSI | CCGG | 4 cut(s) | 133, 253, 269, 776 |
| BslFI | GGGAC | 2 cut(s) | 251, 554 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 133, 138 |
| BsmAI | GTCTC | 6 cut(s) | 363, 369, 377, 887, 892, 962 |
| BsmBI | CGTCTC | 5 cut(s) | 363, 369, 377, 887, 962 |
| BsmFI | GGGAC | 2 cut(s) | 251, 554 |
| BsnI | GGCC | 3 cut(s) | 188, 275, 654 |
| Bso31I | GGTCTC | 1 cut(s) | 892 |
| BsoBI | CYCGRG | 1 cut(s) | 132 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 924 |
| Bsp19I | CCATGG | 1 cut(s) | 649 |
| Bsp68I | TCGCGA | 1 cut(s) | 877 |
| BspANI | GGCC | 3 cut(s) | 188, 275, 654 |
| BspCNI | CTCAG | 3 cut(s) | 258, 382, 544 |
| BspFNI | CGCG | 1 cut(s) | 877 |
| BspLI | GGNNCC | 6 cut(s) | 165, 276, 483, 516, 570, 625 |
| BspMI | ACCTGC | 1 cut(s) | 906 |
| BspTNI | GGTCTC | 1 cut(s) | 892 |
| BsrFI | RCCGGY | 1 cut(s) | 252 |
| BssAI | RCCGGY | 1 cut(s) | 252 |
| BssECI | CCNNGG | 3 cut(s) | 132, 411, 649 |
| BssNI | GRCGYC | 2 cut(s) | 195, 972 |
| BssSI | CACGAG | 2 cut(s) | 22, 257 |
| BssT1I | CCWWGG | 1 cut(s) | 649 |
| Bst2BI | CACGAG | 2 cut(s) | 22, 257 |
| Bst2UI | CCWGG | 1 cut(s) | 621 |
| Bst4CI | ACNGT | 3 cut(s) | 548, 589, 659 |
| Bst6I | CTCTTC | 1 cut(s) | 827 |
| BstACI | GRCGYC | 2 cut(s) | 195, 972 |
| BstBAI | YACGTR | 3 cut(s) | 180, 213, 466 |
| BstC8I | GCNNGC | 4 cut(s) | 117, 158, 162, 254 |
| BstDEI | CTNAG | 5 cut(s) | 245, 390, 441, 531, 924 |
| BstDSI | CCRYGG | 1 cut(s) | 649 |
| BstF5I | GGATG | 3 cut(s) | 680, 697, 772 |
| BstFNI | CGCG | 1 cut(s) | 877 |
| BstHHI | GCGC | 1 cut(s) | 930 |
| BstMAI | GTCTC | 6 cut(s) | 363, 369, 377, 887, 892, 962 |
| BstMCI | CGRYCG | 2 cut(s) | 220, 756 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 24, 65, 84, 153, 194, 213, 416, 651, 969 |
| BstNI | CCWGG | 1 cut(s) | 621 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 392 |
| BstSCI | CCNGG | 4 cut(s) | 131, 132, 267, 619 |
| BstUI | CGCG | 1 cut(s) | 877 |
| BstV1I | GCAGC | 4 cut(s) | 116, 316, 403, 414 |
| BstV2I | GAAGAC | 1 cut(s) | 863 |
| BstX2I | RGATCY | 7 cut(s) | 96, 445, 481, 493, 514, 623, 736 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 115 |
| BstYI | RGATCY | 7 cut(s) | 96, 445, 481, 493, 514, 623, 736 |
| Bsu36I | CCTNAGG | 1 cut(s) | 441 |
| BsuRI | GGCC | 3 cut(s) | 188, 275, 654 |
| BtgI | CCRYGG | 1 cut(s) | 649 |
| BtgZI | GCGATG | 1 cut(s) | 858 |
| BtrI | CACGTC | 1 cut(s) | 175 |
| BtsCI | GGATG | 3 cut(s) | 680, 697, 772 |
| BtsIMutI | CAGTG | 2 cut(s) | 290, 655 |
| BtuMI | TCGCGA | 1 cut(s) | 877 |
| BveI | ACCTGC | 1 cut(s) | 906 |
| Cac8I | GCNNGC | 4 cut(s) | 117, 158, 162, 254 |
| CfoI | GCGC | 1 cut(s) | 930 |
| Cfr10I | RCCGGY | 1 cut(s) | 252 |
| Cfr13I | GGNCC | 2 cut(s) | 274, 568 |
| Cfr9I | CCCGGG | 1 cut(s) | 132 |
| CseI | GACGC | 4 cut(s) | 196, 203, 688, 961 |
| Csp6I | GTAC | 2 cut(s) | 555, 823 |
| CviAII | CATG | 3 cut(s) | 478, 650, 718 |
| CviQI | GTAC | 2 cut(s) | 555, 823 |
| DdeI | CTNAG | 5 cut(s) | 245, 390, 441, 531, 924 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 566, 730 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 566, 730 |
| EaeI | YGGCCR | 1 cut(s) | 652 |
| Eam1104I | CTCTTC | 1 cut(s) | 827 |
| EarI | CTCTTC | 1 cut(s) | 827 |
| EciI | GGCGGA | 1 cut(s) | 812 |
| Eco130I | CCWWGG | 1 cut(s) | 649 |
| Eco31I | GGTCTC | 1 cut(s) | 892 |
| Eco47I | GGWCC | 1 cut(s) | 568 |
| Eco72I | CACGTG | 2 cut(s) | 180, 213 |
| Eco81I | CCTNAGG | 1 cut(s) | 441 |
| Eco88I | CYCGRG | 1 cut(s) | 132 |
| EcoRI | GAATTC | 1 cut(s) | 451 |
| EcoRII | CCWGG | 1 cut(s) | 619 |
| EcoT14I | CCWWGG | 1 cut(s) | 649 |
| ErhI | CCWWGG | 1 cut(s) | 649 |
| Esp3I | CGTCTC | 5 cut(s) | 363, 369, 377, 887, 962 |
| FaeI | CATG | 3 cut(s) | 481, 653, 721 |
| FaiI | YATR | 6 cut(s) | 479, 642, 651, 689, 719, 888 |
| FaqI | GGGAC | 2 cut(s) | 251, 554 |
| FatI | CATG | 3 cut(s) | 477, 649, 717 |
| FauI | CCCGC | 2 cut(s) | 131, 175 |
| Fnu4HI | GCNGC | 6 cut(s) | 105, 250, 330, 417, 428, 964 |
| FokI | GGATG | 3 cut(s) | 667, 704, 759 |
| Fsp4HI | GCNGC | 6 cut(s) | 105, 250, 330, 417, 428, 964 |
| FspBI | CTAG | 1 cut(s) | 810 |
| GlaI | GCGC | 1 cut(s) | 929 |
| GluI | GCNGC | 6 cut(s) | 105, 250, 330, 417, 428, 964 |
| HaeIII | GGCC | 3 cut(s) | 188, 275, 654 |
| HapII | CCGG | 4 cut(s) | 133, 253, 269, 776 |
| HgaI | GACGC | 4 cut(s) | 196, 203, 688, 961 |
| HhaI | GCGC | 1 cut(s) | 930 |
| Hin1I | GRCGYC | 2 cut(s) | 195, 972 |
| Hin1II | CATG | 3 cut(s) | 481, 653, 721 |
| Hin6I | GCGC | 1 cut(s) | 928 |
| HinP1I | GCGC | 1 cut(s) | 928 |
| HincII | GTYRAC | 2 cut(s) | 337, 768 |
| HindII | GTYRAC | 2 cut(s) | 337, 768 |
| HindIII | AAGCTT | 2 cut(s) | 601, 882 |
| HinfI | GANTC | 8 cut(s) | 20, 43, 62, 264, 287, 305, 862, 906 |
| HpaI | GTTAAC | 1 cut(s) | 768 |
| HpaII | CCGG | 4 cut(s) | 133, 253, 269, 776 |
| HphI | GGTGA | 1 cut(s) | 733 |
| Hpy166II | GTNNAC | 3 cut(s) | 82, 337, 768 |
| Hpy188I | TCNGA | 8 cut(s) | 301, 325, 364, 450, 475, 519, 736, 786 |
| Hpy188III | TCNNGA | 5 cut(s) | 497, 533, 803, 853, 876 |
| Hpy8I | GTNNAC | 3 cut(s) | 82, 337, 768 |
| Hpy99I | CGWCG | 6 cut(s) | 40, 194, 197, 368, 704, 977 |
| HpyCH4III | ACNGT | 3 cut(s) | 548, 589, 659 |
| HpyCH4IV | ACGT | 5 cut(s) | 174, 179, 212, 465, 955 |
| HpyCH4V | TGCA | 3 cut(s) | 27, 183, 577 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 24, 65, 84, 153, 194, 213, 416, 651, 969 |
| HpyF3I | CTNAG | 5 cut(s) | 245, 390, 441, 531, 924 |
| HpySE526I | ACGT | 5 cut(s) | 174, 179, 212, 465, 955 |
| Hsp92I | GRCGYC | 2 cut(s) | 195, 972 |
| Hsp92II | CATG | 3 cut(s) | 481, 653, 721 |
| HspAI | GCGC | 1 cut(s) | 928 |
| KroI | GCCGGC | 1 cut(s) | 252 |
| KroNI | GCCGGC | 1 cut(s) | 254 |
| KspAI | GTTAAC | 1 cut(s) | 768 |
| LmnI | GCTCC | 3 cut(s) | 169, 435, 538 |
| Lsp1109I | GCAGC | 4 cut(s) | 116, 316, 403, 414 |
| LweI | GCATC | 4 cut(s) | 14, 316, 781, 881 |
| MaeI | CTAG | 1 cut(s) | 810 |
| MaeII | ACGT | 5 cut(s) | 174, 179, 212, 465, 955 |
| MaeIII | GTNAC | 4 cut(s) | 175, 208, 721, 866 |
| MboII | GAAGA | 2 cut(s) | 844, 868 |
| MflI | RGATCY | 7 cut(s) | 96, 445, 481, 493, 514, 623, 736 |
| MlsI | TGGCCA | 1 cut(s) | 654 |
| MluCI | AATT | 1 cut(s) | 451 |
| MluNI | TGGCCA | 1 cut(s) | 654 |
| MlyI | GAGTC | 6 cut(s) | 14, 37, 56, 273, 281, 299 |
| MmeI | TCCRAC | 2 cut(s) | 387, 498 |
| Mox20I | TGGCCA | 1 cut(s) | 654 |
| MroNI | GCCGGC | 1 cut(s) | 252 |
| MscI | TGGCCA | 1 cut(s) | 654 |
| MseI | TTAA | 2 cut(s) | 662, 767 |
| Msp20I | TGGCCA | 1 cut(s) | 654 |
| MspI | CCGG | 4 cut(s) | 133, 253, 269, 776 |
| MspR9I | CCNGG | 4 cut(s) | 133, 134, 269, 621 |
| MvaI | CCWGG | 1 cut(s) | 621 |
| MvnI | CGCG | 1 cut(s) | 877 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 24, 65, 84, 153, 194, 213, 416, 651, 969 |
| NaeI | GCCGGC | 1 cut(s) | 254 |
| NciI | CCSGG | 3 cut(s) | 133, 134, 269 |
| NcoI | CCATGG | 1 cut(s) | 649 |
| NgoMIV | GCCGGC | 1 cut(s) | 252 |
| NlaIII | CATG | 3 cut(s) | 481, 653, 721 |
| NlaIV | GGNNCC | 6 cut(s) | 165, 276, 483, 516, 570, 625 |
| NmeAIII | GCCGAG | 2 cut(s) | 80, 436 |
| NmuCI | GTSAC | 3 cut(s) | 175, 208, 721 |
| NruI | TCGCGA | 1 cut(s) | 877 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 38, 471 |
| PdiI | GCCGGC | 1 cut(s) | 254 |
| PfeI | GAWTC | 2 cut(s) | 862, 906 |
| PkrI | GCNGC | 6 cut(s) | 106, 251, 331, 418, 429, 965 |
| Ple19I | CGATCG | 1 cut(s) | 756 |
| PleI | GAGTC | 6 cut(s) | 14, 37, 56, 272, 281, 299 |
| PmaCI | CACGTG | 2 cut(s) | 180, 213 |
| PmlI | CACGTG | 2 cut(s) | 180, 213 |
| PpsI | GAGTC | 6 cut(s) | 14, 37, 56, 272, 281, 299 |
| Ppu21I | YACGTR | 3 cut(s) | 180, 213, 466 |
| PshAI | GACNNNNGTC | 1 cut(s) | 392 |
| Psp6I | CCWGG | 1 cut(s) | 619 |
| PspCI | CACGTG | 2 cut(s) | 180, 213 |
| PspGI | CCWGG | 1 cut(s) | 619 |
| PspN4I | GGNNCC | 6 cut(s) | 165, 276, 483, 516, 570, 625 |
| PspPI | GGNCC | 2 cut(s) | 274, 568 |
| PsuI | RGATCY | 7 cut(s) | 96, 445, 481, 493, 514, 623, 736 |
| PvuI | CGATCG | 1 cut(s) | 756 |
| RruI | TCGCGA | 1 cut(s) | 877 |
| RsaI | GTAC | 2 cut(s) | 556, 824 |
| RsaNI | GTAC | 2 cut(s) | 555, 823 |
| SaqAI | TTAA | 2 cut(s) | 662, 767 |
| SatI | GCNGC | 6 cut(s) | 105, 250, 330, 417, 428, 964 |
| Sau96I | GGNCC | 2 cut(s) | 274, 568 |
| SchI | GAGTC | 6 cut(s) | 14, 37, 56, 273, 281, 299 |
| ScrFI | CCNGG | 4 cut(s) | 133, 134, 269, 621 |
| SfaNI | GCATC | 4 cut(s) | 14, 316, 781, 881 |
| SinI | GGWCC | 1 cut(s) | 568 |
| SmaI | CCCGGG | 1 cut(s) | 134 |
| Sse9I | AATT | 1 cut(s) | 451 |
| SspMI | CTAG | 1 cut(s) | 810 |
| StyD4I | CCNGG | 4 cut(s) | 131, 132, 267, 619 |
| StyI | CCWWGG | 1 cut(s) | 649 |
| TaaI | ACNGT | 3 cut(s) | 548, 589, 659 |
| TaiI | ACGT | 5 cut(s) | 177, 182, 215, 468, 958 |
| TaqI | TCGA | 4 cut(s) | 8, 752, 852, 945 |
| TaqII | GACCGA | 2 cut(s) | 234, 366 |
| TasI | AATT | 1 cut(s) | 451 |
| TauI | GCSGC | 2 cut(s) | 252, 966 |
| TfiI | GAWTC | 2 cut(s) | 862, 906 |
| Tru1I | TTAA | 2 cut(s) | 662, 767 |
| Tru9I | TTAA | 2 cut(s) | 662, 767 |
| TscAI | CASTG | 2 cut(s) | 297, 662 |
| TseFI | GTSAC | 3 cut(s) | 175, 208, 721 |
| TseI | GCWGC | 4 cut(s) | 104, 329, 416, 427 |
| Tsp45I | GTSAC | 3 cut(s) | 175, 208, 721 |
| TspDTI | ATGAA | 2 cut(s) | 625, 780 |
| TspGWI | ACGGA | 6 cut(s) | 381, 387, 393, 474, 576, 740 |
| TspMI | CCCGGG | 1 cut(s) | 132 |
| TspRI | CASTG | 2 cut(s) | 297, 662 |
| VpaK11BI | GGWCC | 1 cut(s) | 568 |
| XapI | RAATTY | 1 cut(s) | 451 |
| XmaI | CCCGGG | 1 cut(s) | 132 |
| XspI | CTAG | 1 cut(s) | 810 |