Prupe.1G426300_v2.0.a1

3-oxo-Delta(4,5)-steroid 5-beta-reductase-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
36660220 .. 36661839
1620 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G426300.1

Sequence Viewer

Length: 1185 bp
ATGAGCTGGTGGTGGGCTAGAGCTGTTGCCGATGCCAAGAAGAAATATCAAGGAGTTGACACGTCAGCACCACAAGGCCAAAGGAGTGTGGGGCTAGTGATCGGCGTGACGGGCATAGTGGGTAACAGCCTAGCTGAGATCCTCCCTCGCCCTGACACACCAGGCGGCCCGTGGAAGGTGTACGGCGTCGCCCGCCGTCCCCGCCCAAAATGGAACGCCGACCATCCCGTTGACTATATCCAGTGCGACATCTCGGACCCGGAAGACACAAAGGCCAAGCTCTCTAAATTAACCGATGTCACGCACCTATTTTACGTGTCATGGGCCCACAAAGCCACCGAGGTCGAAAATTGCGAGGCCAACGGGGCCATGCTCCGCAACGTGTTAGGTGTCGTGATCCCTGTGGCGCCAAATATCCGCCACGTGTCGTTGCAAACTGGCACCAAACACTATATTGGTCCGTTCGAGTCATTTGGCAAGATCAAAGCCCATGACCCGCCTTTTACTGAGGACCTGCCGAGGCTGGACGTTTCCAATTTCTATTACACTCAGGAGGACATATTGTTTGATGAGGCTAAGAAGAAGGAGGGGTTGAGTTGGTCGGTCCATAGGCCCAATACCATATTTGGGTTTTCTCCTTATAGCTTGATGAACGTAATTGGGACGCTTTGCGTCTACGCTGCTATATGTAAGCATGAGAAGAAGCCTTTGAAATTTCCCGGAAGCAAAGCGGCTTGGAATTGCTTCTCGGTGGCTTCGGATGCGGATTTGATCGCGGAGCAGCATATCTGGGCGGCTGTGGATCCGTATGCAAAAAACGAAGCGTTTAATGTGAACAATGGGGATGTGTTTAAGTGGAAGCATGTTTGGAAGGTGTTGGCGGAGCAGTTTGGGATTGAGGAGTATGGGATTGATGAGGAAGAGGGTGAGAGGAGGTTGAGCTTGGTGGAGATGATGAAGGGGAAAGGTGGTGTGTGGGAAGAGATTGTGAAGAAGAATAAGCTGCAGCCAACAAAGTTGGAGGAGGTAGGGGTTTGGTGGTTTGCTGACATCGTGTTGTGTGTTGAGTCTGCGTTGGACAGTATGAACAAGAGCAAGGAGCATGGCTTTTTGGGTTTCAGAAATTCCCAAGAGTCCTTCACTTCCTGGGTTCAAAAGATGAAAGCTTACAAGATTGTTCCATGA

Protein Analysis

395

Amino Acids

44.42

Weight (kDa)

6.84

Isoelectric Point (pI)

35.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000626)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G24220 AT4G24220
fragaria_vesca FvH4_2g04580 FvH4_2g04580 FvH4_2g04580 FvH4_4g06071 FvH4_5g25130
malus_domestica MD05G1094500.v1.1 MD05G1108300.v1.1 MD08G1088400.v1.1 MD15G1073200.v1.1 MD15G1073300.v1.1 MD15G1073400.v1.1 MD15G1073500.v1.1 MD15G1073600.v1.1
prunus_persica Prupe.1G426100_v2.0.a1 Prupe.1G426100_v2.0.a1 Prupe.1G426200_v2.0.a1 Prupe.1G426300_v2.0.a1 Prupe.1G426400_v2.0.a1 Prupe.1G426400_v2.0.a1 Prupe.8G139400_v2.0.a1 Prupe.8G139400_v2.0.a1
pyrus_communis pycom05g09350 pycom08g07190 pycom13g22780 pycom15g06840 pycom15g06850 pycom15g06870
rosa_chinensis RchiOBHm_Chr6g0254161 RchiOBHm_Chr6g0254181 RchiOBHm_Chr6g0254191 RchiOBHm_Chr6g0309171 RchiOBHm_Chr6g0309181 RchiOBHm_Chr6g0309191 RchiOBHm_Chr6g0309201
rosa_laevigata RLG00000010582 RLG00000010583 RLG00000014937 RLG00000014938
rosa_multiflora Rmu_co8060540.1_g000001 Rmu_co8332663.1_g000001 Rmu_sc0000010.1_g000017 Rmu_sc0003711.1_g000008 Rmu_sc0016971.1_g000003 Rmu_sc0020102.1_g000006 Rmu_sc0020102.1_g000008
rosa_roxburghii Rroxscaffold_7G00159570 Rroxscaffold_7G00159580 Rroxscaffold_7G00159590 Rroxscaffold_7G00211100
rosa_rugosa Rorug05G0550400 Rorug06G0370100 Rorug06G0370300
rosa_samantha Rh6AG066900 Rh6AG483200 Rh6AG483300 Rh6AG483400 Rh6BG059800 Rh6BG060000 Rh6BG492200 Rh6BG492300 Rh6BG492500 Rh6CG059700 Rh6CG059800 Rh6CG496900 Rh6CG497000 Rh6CG497200 Rh6CG497400 Rh6DG056700 Rh6DG056800 Rh6DG483800 Rh6DG484000
rosa_wichuraiana Rw6G005860 Rw6G005870 Rw6G042070 Rw6G042080 Rw6G042090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 522
AccB1I GGYRCC 2 cut(s) 406, 440
AccI GTMKAC 1 cut(s) 675
AccII CGCG 1 cut(s) 776
AclWI GGATC 4 cut(s) 133, 391, 797, 810
AcsI RAATTY 2 cut(s) 713, 1123
AcvI CACGTG 1 cut(s) 424
AcyI GRCGYC 2 cut(s) 186, 407
AfaI GTAC 1 cut(s) 182
AfiI CCNNNNNNNGG 2 cut(s) 175, 627
AflIII ACRYGT 4 cut(s) 60, 315, 381, 423
AgsI TTSAA 2 cut(s) 712, 1154
AjiI CACGTC 1 cut(s) 63
AjnI CCWGG 2 cut(s) 160, 1145
AluBI AGCT 8 cut(s) 6, 23, 134, 280, 645, 942, 1003, 1166
AluI AGCT 8 cut(s) 6, 23, 134, 280, 645, 942, 1003, 1166
AlwI GGATC 4 cut(s) 133, 391, 797, 810
AoxI GGCC 7 cut(s) 76, 166, 273, 324, 357, 366, 611
ApaI GGGCCC 1 cut(s) 328
ApeKI GCWGC 4 cut(s) 680, 781, 1003, 1006
ApoI RAATTY 2 cut(s) 713, 1123
ArsI GACNNNNNNTTYG 2 cut(s) 548, 580
Asp700I GAANNNNTTC 1 cut(s) 743
AspLEI GCGC 1 cut(s) 409
AspS9I GGNCC 9 cut(s) 167, 256, 324, 325, 366, 458, 511, 604, 612
AsuC2I CCSGG 2 cut(s) 260, 720
AsuHPI GGTGA 1 cut(s) 938
AvaII GGWCC 4 cut(s) 256, 458, 511, 604
BaeGI GKGCMC 1 cut(s) 328
BamHI GGATCC 1 cut(s) 802
BanI GGYRCC 2 cut(s) 406, 440
BanII GRGCYC 1 cut(s) 328
BbrPI CACGTG 1 cut(s) 424
BbsI GAAGAC 1 cut(s) 270
BbvI GCAGC 4 cut(s) 667, 793, 990, 1018
BccI CCATC 1 cut(s) 231
BceAI ACGGC 2 cut(s) 180, 199
BciT130I CCWGG 2 cut(s) 162, 1147
BcnI CCSGG 2 cut(s) 260, 720
BfaI CTAG 3 cut(s) 18, 95, 131
BfmI CTRYAG 1 cut(s) 1004
BfoI RGCGCY 1 cut(s) 410
BfuAI ACCTGC 1 cut(s) 522
BglI GCCNNNNNGGC 1 cut(s) 365
BisI GCNGC 7 cut(s) 166, 681, 732, 782, 795, 1004, 1007
BlsI GCNGC 7 cut(s) 167, 682, 733, 783, 796, 1005, 1008
Bme1390I CCNGG 4 cut(s) 162, 260, 720, 1147
Bme18I GGWCC 4 cut(s) 256, 458, 511, 604
BmgBI CACGTC 1 cut(s) 63
BmgT120I GGNCC 9 cut(s) 167, 256, 324, 325, 366, 458, 511, 604, 612
BmiI GGNNCC 6 cut(s) 258, 326, 367, 408, 442, 804
BmrFI CCNGG 4 cut(s) 162, 260, 720, 1147
BmsI GCATC 2 cut(s) 22, 751
BpiI GAAGAC 1 cut(s) 270
BpuMI CCSGG 2 cut(s) 260, 720
BsaAI YACGTR 2 cut(s) 316, 424
BsaHI GRCGYC 2 cut(s) 186, 407
BsaJI CCNNGG 4 cut(s) 170, 339, 518, 1146
Bsc4I CCNNNNNNNGG 2 cut(s) 175, 627
Bse1I ACTGG 2 cut(s) 241, 442
BseBI CCWGG 2 cut(s) 162, 1147
BseDI CCNNGG 4 cut(s) 170, 339, 518, 1146
BseGI GGATG 3 cut(s) 223, 766, 850
BseLI CCNNNNNNNGG 2 cut(s) 175, 627
BseMII CTCAG 3 cut(s) 126, 498, 563
BseNI ACTGG 2 cut(s) 241, 442
BseRI GAGGAG 3 cut(s) 914, 946, 1037
BseSI GKGCMC 1 cut(s) 328
BseXI GCAGC 4 cut(s) 667, 793, 990, 1018
Bsh1236I CGCG 1 cut(s) 776
BshFI GGCC 7 cut(s) 78, 168, 275, 326, 359, 368, 613
BshNI GGYRCC 2 cut(s) 406, 440
BsiSI CCGG 2 cut(s) 260, 720
BslFI GGGAC 2 cut(s) 183, 676
BslI CCNNNNNNNGG 2 cut(s) 175, 627
BsmFI GGGAC 2 cut(s) 183, 676
BsnI GGCC 7 cut(s) 78, 168, 275, 326, 359, 368, 613
Bsp120I GGGCCC 1 cut(s) 324
Bsp1286I GDGCHC 1 cut(s) 328
Bsp143I GATC 6 cut(s) 99, 138, 396, 480, 771, 802
BspANI GGCC 7 cut(s) 78, 168, 275, 326, 359, 368, 613
BspCNI CTCAG 3 cut(s) 127, 499, 562
BspFNI CGCG 1 cut(s) 776
BspLI GGNNCC 6 cut(s) 258, 326, 367, 408, 442, 804
BspMAI CTGCAG 1 cut(s) 1008
BspMI ACCTGC 1 cut(s) 522
BspPI GGATC 4 cut(s) 133, 391, 797, 810
BspT107I GGYRCC 2 cut(s) 406, 440
BsrI ACTGG 2 cut(s) 241, 442
BssECI CCNNGG 4 cut(s) 170, 339, 518, 1146
BssMI GATC 6 cut(s) 99, 138, 396, 480, 771, 802
BssNI GRCGYC 2 cut(s) 186, 407
Bst2UI CCWGG 2 cut(s) 162, 1147
Bst4CI ACNGT 1 cut(s) 1082
Bst6I CTCTTC 2 cut(s) 915, 975
BstACI GRCGYC 2 cut(s) 186, 407
BstBAI YACGTR 2 cut(s) 316, 424
BstC8I GCNNGC 1 cut(s) 193
BstDEI CTNAG 4 cut(s) 135, 507, 549, 576
BstDSI CCRYGG 1 cut(s) 170
BstF5I GGATG 3 cut(s) 223, 766, 850
BstFNI CGCG 1 cut(s) 776
BstH2I RGCGCY 1 cut(s) 410
BstHHI GCGC 1 cut(s) 409
BstKTI GATC 6 cut(s) 102, 141, 399, 483, 774, 805
BstMBI GATC 6 cut(s) 99, 138, 396, 480, 771, 802
BstMWI GCNNNNNNNGC 6 cut(s) 111, 192, 201, 332, 365, 761
BstNI CCWGG 2 cut(s) 162, 1147
BstNSI RCATGY 1 cut(s) 866
BstSCI CCNGG 4 cut(s) 160, 258, 718, 1145
BstSFI CTRYAG 1 cut(s) 1004
BstSLI GKGCMC 1 cut(s) 328
BstUI CGCG 1 cut(s) 776
BstV1I GCAGC 4 cut(s) 667, 793, 990, 1018
BstV2I GAAGAC 1 cut(s) 270
BstX2I RGATCY 2 cut(s) 138, 802
BstYI RGATCY 2 cut(s) 138, 802
BsuRI GGCC 7 cut(s) 78, 168, 275, 326, 359, 368, 613
BtgI CCRYGG 1 cut(s) 170
BtrI CACGTC 1 cut(s) 63
BtsCI GGATG 3 cut(s) 223, 766, 850
BtsIMutI CAGTG 1 cut(s) 248
BveI ACCTGC 1 cut(s) 522
Cac8I GCNNGC 1 cut(s) 193
CfoI GCGC 1 cut(s) 409
Cfr13I GGNCC 9 cut(s) 167, 256, 324, 325, 366, 458, 511, 604, 612
CseI GACGC 3 cut(s) 175, 661, 673
Csp6I GTAC 1 cut(s) 181
CviAII CATG 7 cut(s) 321, 370, 491, 695, 863, 1103, 1182
CviQI GTAC 1 cut(s) 181
DdeI CTNAG 4 cut(s) 135, 507, 549, 576
DinI GGCGCC 1 cut(s) 408
DpnI GATC 6 cut(s) 101, 140, 398, 482, 773, 804
DpnII GATC 6 cut(s) 99, 138, 396, 480, 771, 802
Eam1104I CTCTTC 2 cut(s) 915, 975
EarI CTCTTC 2 cut(s) 915, 975
EciI GGCGGA 2 cut(s) 407, 896
Eco24I GRGCYC 1 cut(s) 328
Eco47I GGWCC 4 cut(s) 256, 458, 511, 604
Eco72I CACGTG 1 cut(s) 424
EcoO109I RGGNCCY 1 cut(s) 511
EcoRII CCWGG 2 cut(s) 160, 1145
EcoT38I GRGCYC 1 cut(s) 328
EgeI GGCGCC 1 cut(s) 408
EheI GGCGCC 1 cut(s) 408
FaeI CATG 7 cut(s) 324, 373, 494, 698, 866, 1106, 1185
FaqI GGGAC 2 cut(s) 183, 676
FatI CATG 7 cut(s) 320, 369, 490, 694, 862, 1102, 1181
FauI CCCGC 3 cut(s) 200, 209, 504
FblI GTMKAC 1 cut(s) 675
Fnu4HI GCNGC 7 cut(s) 166, 681, 732, 782, 795, 1004, 1007
FokI GGATG 3 cut(s) 210, 773, 857
FriOI GRGCYC 1 cut(s) 328
Fsp4HI GCNGC 7 cut(s) 166, 681, 732, 782, 795, 1004, 1007
FspBI CTAG 3 cut(s) 18, 95, 131
GlaI GCGC 1 cut(s) 408
GluI GCNGC 7 cut(s) 166, 681, 732, 782, 795, 1004, 1007
HaeII RGCGCY 1 cut(s) 410
HaeIII GGCC 7 cut(s) 78, 168, 275, 326, 359, 368, 613
HapII CCGG 2 cut(s) 260, 720
HgaI GACGC 3 cut(s) 175, 661, 673
HhaI GCGC 1 cut(s) 409
Hin1I GRCGYC 2 cut(s) 186, 407
Hin1II CATG 7 cut(s) 324, 373, 494, 698, 866, 1106, 1185
Hin6I GCGC 1 cut(s) 407
HinP1I GCGC 1 cut(s) 407
HincII GTYRAC 2 cut(s) 58, 232
HindII GTYRAC 2 cut(s) 58, 232
HindIII AAGCTT 1 cut(s) 1164
HinfI GANTC 3 cut(s) 467, 1067, 1133
HpaII CCGG 2 cut(s) 260, 720
HphI GGTGA 1 cut(s) 938
Hpy166II GTNNAC 5 cut(s) 58, 181, 232, 676, 835
Hpy188I TCNGA 3 cut(s) 256, 760, 1121
Hpy188III TCNNGA 2 cut(s) 394, 551
Hpy8I GTNNAC 5 cut(s) 58, 181, 232, 676, 835
Hpy99I CGWCG 1 cut(s) 191
HpyAV CCTTC 5 cut(s) 169, 577, 865, 952, 1147
HpyCH4III ACNGT 1 cut(s) 1082
HpyCH4IV ACGT 6 cut(s) 62, 315, 381, 423, 528, 654
HpyCH4V TGCA 3 cut(s) 433, 812, 1006
HpyF10VI GCNNNNNNNGC 6 cut(s) 111, 192, 201, 332, 365, 761
HpyF3I CTNAG 4 cut(s) 135, 507, 549, 576
HpySE526I ACGT 6 cut(s) 62, 315, 381, 423, 528, 654
Hsp92I GRCGYC 2 cut(s) 186, 407
Hsp92II CATG 7 cut(s) 324, 373, 494, 698, 866, 1106, 1185
HspAI GCGC 1 cut(s) 407
KasI GGCGCC 1 cut(s) 406
Kzo9I GATC 6 cut(s) 99, 138, 396, 480, 771, 802
LmnI GCTCC 4 cut(s) 378, 778, 883, 1099
Lsp1109I GCAGC 4 cut(s) 667, 793, 990, 1018
LweI GCATC 2 cut(s) 22, 751
MaeI CTAG 3 cut(s) 18, 95, 131
MaeII ACGT 6 cut(s) 62, 315, 381, 423, 528, 654
MaeIII GTNAC 3 cut(s) 106, 122, 298
MalI GATC 6 cut(s) 101, 140, 398, 482, 773, 804
MboI GATC 6 cut(s) 99, 138, 396, 480, 771, 802
MboII GAAGA 8 cut(s) 52, 275, 592, 712, 932, 992, 1003, 1006
MflI RGATCY 2 cut(s) 138, 802
MhlI GDGCHC 1 cut(s) 328
MluCI AATT 7 cut(s) 287, 349, 535, 657, 713, 739, 1123
Mly113I GGCGCC 1 cut(s) 407
MlyI GAGTC 3 cut(s) 476, 1076, 1142
MmeI TCCRAC 2 cut(s) 999, 1056
MroXI GAANNNNTTC 1 cut(s) 743
MseI TTAA 3 cut(s) 290, 828, 852
MspI CCGG 2 cut(s) 260, 720
MspR9I CCNGG 4 cut(s) 162, 260, 720, 1147
MvaI CCWGG 2 cut(s) 162, 1147
MvnI CGCG 1 cut(s) 776
MwoI GCNNNNNNNGC 6 cut(s) 111, 192, 201, 332, 365, 761
NarI GGCGCC 1 cut(s) 407
NciI CCSGG 2 cut(s) 260, 720
NdeII GATC 6 cut(s) 99, 138, 396, 480, 771, 802
NlaIII CATG 7 cut(s) 324, 373, 494, 698, 866, 1106, 1185
NlaIV GGNNCC 6 cut(s) 258, 326, 367, 408, 442, 804
NmeAIII GCCGAG 1 cut(s) 543
NmuCI GTSAC 2 cut(s) 106, 298
NspI RCATGY 1 cut(s) 866
PcsI WCGNNNNNNNCGW 1 cut(s) 351
PdmI GAANNNNTTC 1 cut(s) 743
PfoI TCCNGGA 1 cut(s) 718
PkrI GCNGC 7 cut(s) 167, 682, 733, 783, 796, 1005, 1008
PleI GAGTC 3 cut(s) 475, 1075, 1141
PluTI GGCGCC 1 cut(s) 410
PmaCI CACGTG 1 cut(s) 424
PmlI CACGTG 1 cut(s) 424
PpsI GAGTC 3 cut(s) 475, 1075, 1141
Ppu21I YACGTR 2 cut(s) 316, 424
PpuMI RGGWCCY 1 cut(s) 511
Psp5II RGGWCCY 1 cut(s) 511
Psp6I CCWGG 2 cut(s) 160, 1145
PspCI CACGTG 1 cut(s) 424
PspGI CCWGG 2 cut(s) 160, 1145
PspN4I GGNNCC 6 cut(s) 258, 326, 367, 408, 442, 804
PspOMI GGGCCC 1 cut(s) 324
PspPI GGNCC 9 cut(s) 167, 256, 324, 325, 366, 458, 511, 604, 612
PspPPI RGGWCCY 1 cut(s) 511
PstI CTGCAG 1 cut(s) 1008
PsuI RGATCY 2 cut(s) 138, 802
RsaI GTAC 1 cut(s) 182
RsaNI GTAC 1 cut(s) 181
SaqAI TTAA 3 cut(s) 290, 828, 852
SatI GCNGC 7 cut(s) 166, 681, 732, 782, 795, 1004, 1007
Sau3AI GATC 6 cut(s) 99, 138, 396, 480, 771, 802
Sau96I GGNCC 9 cut(s) 167, 256, 324, 325, 366, 458, 511, 604, 612
SchI GAGTC 3 cut(s) 476, 1076, 1142
ScrFI CCNGG 4 cut(s) 162, 260, 720, 1147
SduI GDGCHC 1 cut(s) 328
SfaNI GCATC 2 cut(s) 22, 751
SfcI CTRYAG 1 cut(s) 1004
SfiI GGCCNNNNNGGCC 1 cut(s) 365
SfoI GGCGCC 1 cut(s) 408
SinI GGWCC 4 cut(s) 256, 458, 511, 604
Sse9I AATT 7 cut(s) 287, 349, 535, 657, 713, 739, 1123
SspDI GGCGCC 1 cut(s) 406
SspMI CTAG 3 cut(s) 18, 95, 131
StyD4I CCNGG 4 cut(s) 160, 258, 718, 1145
TaaI ACNGT 1 cut(s) 1082
TaiI ACGT 6 cut(s) 65, 318, 384, 426, 531, 657
TaqI TCGA 2 cut(s) 345, 465
TaqII GACCGA 1 cut(s) 592
TasI AATT 7 cut(s) 287, 349, 535, 657, 713, 739, 1123
TauI GCSGC 3 cut(s) 168, 734, 797
Tru1I TTAA 3 cut(s) 290, 828, 852
Tru9I TTAA 3 cut(s) 290, 828, 852
TscAI CASTG 1 cut(s) 248
TseFI GTSAC 2 cut(s) 106, 298
TseI GCWGC 4 cut(s) 680, 781, 1003, 1006
Tsp45I GTSAC 2 cut(s) 106, 298
TspDTI ATGAA 4 cut(s) 665, 971, 1100, 1175
TspGWI ACGGA 2 cut(s) 450, 795
TspRI CASTG 1 cut(s) 248
VpaK11BI GGWCC 4 cut(s) 256, 458, 511, 604
XapI RAATTY 2 cut(s) 713, 1123
XceI RCATGY 1 cut(s) 866
XcmI CCANNNNNNNNNTGG 1 cut(s) 168
XmiI GTMKAC 1 cut(s) 675
XmnI GAANNNNTTC 1 cut(s) 743
XspI CTAG 3 cut(s) 18, 95, 131
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.