Rmu_co8332663.1_g000001

3-oxo-Delta(4,5)-steroid 5-beta-reductase-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8332663.1
Physical Location & Seq
Reverse (-)
155 .. 955
801 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8332663.1_g000001.1.cds

Sequence Viewer

Length: 801 bp
atgctgcgcaacgttttgagctccgtcatcccgaacgcgccgaatctccgccacgtgtgcctcctcaccgggaccaagcactacgacgggccgttcgacgcgtacggaaaggtccagatgcacgacgcgccgtcgacggaagatctgccaaggttgaatgtccctctcttctattacactctggaggacgtgttgtatgaagaggcggggaagaatgaaaacgtgacctggtccgttcaccgaccgggactcatattcgggttgtcgccttatagcatgagcagcatagtgagcatgatgtgctcgtacgccgccatatgcaagcacgaggggttgccgttgaggtttccggggaggagagagggttgggaatcgtattcggaggcttcggatgcggatctgatagcggagcagcaaatctgggcggcggttgacccgtacgcgcggaacgaagcgtttaacatcaacaacggggacgtgttcaagtggaagcatatgtggaaggtgttggcggagcagtatgagattgaggagtatggttttgatgagggtttcagcttggtggagatgatgaaggataagggtggcgtgtgggatgagatagtgagggagaatcagctgcggccgacgaagttggaggaggtggggatgtgggagcttgtggagaatgtgttgggtggaggagccgagttgtctagcatgaacaagagtaaggagcatgggtttgtgggattcagaaactctaggaattccttcgttgcttggattgataaggcaaaggcttataagattgtgccttga

Protein Analysis

266

Amino Acids

30.3

Weight (kDa)

5.17

Isoelectric Point (pI)

46.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000626)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G24220 AT4G24220
fragaria_vesca FvH4_2g04580 FvH4_2g04580 FvH4_2g04580 FvH4_4g06071 FvH4_5g25130
malus_domestica MD05G1094500.v1.1 MD05G1108300.v1.1 MD08G1088400.v1.1 MD15G1073200.v1.1 MD15G1073300.v1.1 MD15G1073400.v1.1 MD15G1073500.v1.1 MD15G1073600.v1.1
prunus_persica Prupe.1G426100_v2.0.a1 Prupe.1G426100_v2.0.a1 Prupe.1G426200_v2.0.a1 Prupe.1G426300_v2.0.a1 Prupe.1G426400_v2.0.a1 Prupe.1G426400_v2.0.a1 Prupe.8G139400_v2.0.a1 Prupe.8G139400_v2.0.a1
pyrus_communis pycom05g09350 pycom08g07190 pycom13g22780 pycom15g06840 pycom15g06850 pycom15g06870
rosa_chinensis RchiOBHm_Chr6g0254161 RchiOBHm_Chr6g0254181 RchiOBHm_Chr6g0254191 RchiOBHm_Chr6g0309171 RchiOBHm_Chr6g0309181 RchiOBHm_Chr6g0309191 RchiOBHm_Chr6g0309201
rosa_laevigata RLG00000010582 RLG00000010583 RLG00000014937 RLG00000014938
rosa_multiflora Rmu_co8060540.1_g000001 Rmu_co8332663.1_g000001 Rmu_sc0000010.1_g000017 Rmu_sc0003711.1_g000008 Rmu_sc0016971.1_g000003 Rmu_sc0020102.1_g000006 Rmu_sc0020102.1_g000008
rosa_roxburghii Rroxscaffold_7G00159570 Rroxscaffold_7G00159580 Rroxscaffold_7G00159590 Rroxscaffold_7G00211100
rosa_rugosa Rorug05G0550400 Rorug06G0370100 Rorug06G0370300
rosa_samantha Rh6AG066900 Rh6AG483200 Rh6AG483300 Rh6AG483400 Rh6BG059800 Rh6BG060000 Rh6BG492200 Rh6BG492300 Rh6BG492500 Rh6CG059700 Rh6CG059800 Rh6CG496900 Rh6CG497000 Rh6CG497200 Rh6CG497400 Rh6DG056700 Rh6DG056800 Rh6DG483800 Rh6DG484000
rosa_wichuraiana Rw6G005860 Rw6G005870 Rw6G042070 Rw6G042080 Rw6G042090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 786
Acc16I TGCGCA 1 cut(s) 8
AccI GTMKAC 1 cut(s) 134
AccII CGCG 5 cut(s) 38, 101, 128, 443, 445
AclI AACGTT 1 cut(s) 12
AclWI GGATC 1 cut(s) 405
AcoI YGGCCR 1 cut(s) 623
AcsI RAATTY 1 cut(s) 748
AcvI CACGTG 1 cut(s) 55
AfaI GTAC 3 cut(s) 104, 308, 440
AflIII ACRYGT 4 cut(s) 54, 99, 189, 477
AgsI TTSAA 2 cut(s) 157, 484
AhdI GACNNNNNGTC 1 cut(s) 130
AjiI CACGTC 2 cut(s) 190, 478
AjnI CCWGG 1 cut(s) 227
AluBI AGCT 4 cut(s) 21, 558, 619, 658
AluI AGCT 4 cut(s) 21, 558, 619, 658
Alw21I GWGCWC 2 cut(s) 23, 305
AlwI GGATC 1 cut(s) 405
AoxI GGCC 2 cut(s) 89, 623
ApeKI GCWGC 4 cut(s) 4, 282, 412, 619
ApoI RAATTY 1 cut(s) 748
ArsI GACNNNNNNTTYG 2 cut(s) 77, 109
Asp700I GAANNNNTTC 1 cut(s) 752
AspLEI GCGC 4 cut(s) 9, 40, 130, 445
AspS9I GGNCC 4 cut(s) 72, 89, 112, 231
AsuC2I CCSGG 3 cut(s) 70, 246, 351
AsuHPI GGTGA 2 cut(s) 58, 230
AvaII GGWCC 3 cut(s) 72, 112, 231
BanII GRGCYC 1 cut(s) 23
BauI CACGAG 1 cut(s) 326
BbrPI CACGTG 1 cut(s) 55
Bbv12I GWGCWC 2 cut(s) 23, 305
BbvI GCAGC 3 cut(s) 294, 424, 606
BceAI ACGGC 3 cut(s) 76, 115, 322
BciT130I CCWGG 1 cut(s) 229
BcnI CCSGG 3 cut(s) 70, 246, 351
BfaI CTAG 2 cut(s) 696, 744
BglII AGATCT 1 cut(s) 142
BisI GCNGC 7 cut(s) 5, 283, 312, 413, 426, 620, 623
BlsI GCNGC 7 cut(s) 6, 284, 313, 414, 427, 621, 624
Bme1390I CCNGG 4 cut(s) 70, 229, 246, 351
Bme18I GGWCC 3 cut(s) 72, 112, 231
BmeRI GACNNNNNGTC 1 cut(s) 130
BmgBI CACGTC 2 cut(s) 190, 478
BmgT120I GGNCC 4 cut(s) 72, 89, 112, 231
BmiI GGNNCC 2 cut(s) 73, 685
BmrFI CCNGG 4 cut(s) 70, 229, 246, 351
BmsI GCATC 2 cut(s) 108, 382
BpmI CTGGAG 1 cut(s) 203
BpuMI CCSGG 3 cut(s) 70, 246, 351
BsaAI YACGTR 1 cut(s) 55
BsaBI GATNNNNATC 1 cut(s) 396
BsaJI CCNNGG 2 cut(s) 149, 350
BsaXI ACNNNNNCTCC 8 cut(s) 176, 206, 349, 379, 656, 686, 707, 737
Bse8I GATNNNNATC 1 cut(s) 396
BseBI CCWGG 1 cut(s) 229
BseDI CCNNGG 2 cut(s) 149, 350
BseGI GGATG 4 cut(s) 27, 397, 601, 654
BseJI GATNNNNATC 1 cut(s) 396
BseRI GAGGAG 5 cut(s) 53, 370, 545, 653, 696
BseX3I CGGCCG 1 cut(s) 623
BseXI GCAGC 3 cut(s) 294, 424, 606
Bsh1236I CGCG 5 cut(s) 38, 101, 128, 443, 445
Bsh1285I CGRYCG 2 cut(s) 245, 626
BshFI GGCC 2 cut(s) 91, 625
BsiEI CGRYCG 2 cut(s) 245, 626
BsiHKAI GWGCWC 2 cut(s) 23, 305
BsiSI CCGG 3 cut(s) 69, 245, 350
BsiWI CGTACG 3 cut(s) 102, 306, 438
BslFI GGGAC 4 cut(s) 85, 146, 261, 488
BsmFI GGGAC 4 cut(s) 85, 146, 261, 488
BsnI GGCC 2 cut(s) 91, 625
Bsp1286I GDGCHC 2 cut(s) 23, 305
Bsp143I GATC 2 cut(s) 142, 397
BspANI GGCC 2 cut(s) 91, 625
BspFNI CGCG 5 cut(s) 38, 101, 128, 443, 445
BspLI GGNNCC 2 cut(s) 73, 685
BspPI GGATC 1 cut(s) 405
BssECI CCNNGG 2 cut(s) 149, 350
BssMI GATC 2 cut(s) 142, 397
BssSI CACGAG 1 cut(s) 326
BssT1I CCWWGG 1 cut(s) 149
Bst2BI CACGAG 1 cut(s) 326
Bst2UI CCWGG 1 cut(s) 229
Bst6I CTCTTC 2 cut(s) 173, 195
BstAPI GCANNNNNTGC 1 cut(s) 300
BstBAI YACGTR 1 cut(s) 55
BstC8I GCNNGC 1 cut(s) 323
BstF5I GGATG 4 cut(s) 27, 397, 601, 654
BstFNI CGCG 5 cut(s) 38, 101, 128, 443, 445
BstHHI GCGC 4 cut(s) 9, 40, 130, 445
BstKTI GATC 2 cut(s) 145, 400
BstMBI GATC 2 cut(s) 142, 397
BstMCI CGRYCG 2 cut(s) 245, 626
BstMWI GCNNNNNNNGC 6 cut(s) 57, 127, 282, 291, 300, 392
BstNI CCWGG 1 cut(s) 229
BstSCI CCNGG 4 cut(s) 68, 227, 244, 349
BstUI CGCG 5 cut(s) 38, 101, 128, 443, 445
BstV1I GCAGC 3 cut(s) 294, 424, 606
BstX2I RGATCY 2 cut(s) 142, 397
BstYI RGATCY 2 cut(s) 142, 397
BstZI CGGCCG 1 cut(s) 623
BsuRI GGCC 2 cut(s) 91, 625
BtrI CACGTC 2 cut(s) 190, 478
BtsCI GGATG 4 cut(s) 27, 397, 601, 654
Cac8I GCNNGC 1 cut(s) 323
CfoI GCGC 4 cut(s) 9, 40, 130, 445
Cfr13I GGNCC 4 cut(s) 72, 89, 112, 231
CseI GACGC 2 cut(s) 107, 134
CsiI ACCWGGT 1 cut(s) 227
Csp6I GTAC 3 cut(s) 103, 307, 439
CviAII CATG 4 cut(s) 277, 295, 700, 719
CviJI RGCY 9 cut(s) 21, 91, 386, 558, 619, 625, 658, 686, 782
CviKI_1 RGCY 9 cut(s) 21, 91, 386, 558, 619, 625, 658, 686, 782
CviQI GTAC 3 cut(s) 103, 307, 439
DpnI GATC 2 cut(s) 144, 399
DpnII GATC 2 cut(s) 142, 397
DriI GACNNNNNGTC 1 cut(s) 130
EaeI YGGCCR 1 cut(s) 623
EagI CGGCCG 1 cut(s) 623
Eam1104I CTCTTC 2 cut(s) 173, 195
Eam1105I GACNNNNNGTC 1 cut(s) 130
EarI CTCTTC 2 cut(s) 173, 195
EciI GGCGGA 2 cut(s) 38, 527
Ecl136II GAGCTC 1 cut(s) 21
EclXI CGGCCG 1 cut(s) 623
Eco130I CCWWGG 1 cut(s) 149
Eco24I GRGCYC 1 cut(s) 23
Eco47I GGWCC 3 cut(s) 72, 112, 231
Eco52I CGGCCG 1 cut(s) 623
Eco53kI GAGCTC 1 cut(s) 21
Eco72I CACGTG 1 cut(s) 55
EcoICRI GAGCTC 1 cut(s) 21
EcoRI GAATTC 1 cut(s) 748
EcoRII CCWGG 1 cut(s) 227
EcoT14I CCWWGG 1 cut(s) 149
EcoT38I GRGCYC 1 cut(s) 23
ErhI CCWWGG 1 cut(s) 149
FaeI CATG 4 cut(s) 280, 298, 703, 722
FaqI GGGAC 4 cut(s) 85, 146, 261, 488
FatI CATG 4 cut(s) 276, 294, 699, 718
FauI CCCGC 1 cut(s) 199
FauNDI CATATG 2 cut(s) 317, 495
FblI GTMKAC 1 cut(s) 134
Fnu4HI GCNGC 7 cut(s) 5, 283, 312, 413, 426, 620, 623
FokI GGATG 4 cut(s) 14, 404, 608, 661
FriOI GRGCYC 1 cut(s) 23
Fsp4HI GCNGC 7 cut(s) 5, 283, 312, 413, 426, 620, 623
FspBI CTAG 2 cut(s) 696, 744
FspI TGCGCA 1 cut(s) 8
GlaI GCGC 4 cut(s) 8, 39, 129, 444
GluI GCNGC 7 cut(s) 5, 283, 312, 413, 426, 620, 623
GsuI CTGGAG 1 cut(s) 203
HaeIII GGCC 2 cut(s) 91, 625
HapII CCGG 3 cut(s) 69, 245, 350
HgaI GACGC 2 cut(s) 107, 134
HhaI GCGC 4 cut(s) 9, 40, 130, 445
Hin1II CATG 4 cut(s) 280, 298, 703, 722
Hin6I GCGC 4 cut(s) 7, 38, 128, 443
HinP1I GCGC 4 cut(s) 7, 38, 128, 443
HincII GTYRAC 2 cut(s) 135, 433
HindII GTYRAC 2 cut(s) 135, 433
HinfI GANTC 5 cut(s) 43, 249, 371, 613, 732
HpaII CCGG 3 cut(s) 69, 245, 350
HphI GGTGA 2 cut(s) 58, 230
Hpy166II GTNNAC 3 cut(s) 135, 238, 433
Hpy188I TCNGA 4 cut(s) 382, 391, 402, 737
Hpy188III TCNNGA 3 cut(s) 31, 115, 182
Hpy8I GTNNAC 3 cut(s) 135, 238, 433
Hpy99I CGWCG 6 cut(s) 89, 101, 128, 136, 139, 631
HpyAV CCTTC 3 cut(s) 496, 568, 763
HpyCH4IV ACGT 5 cut(s) 12, 54, 189, 222, 477
HpyCH4V TGCA 2 cut(s) 121, 321
HpyF10VI GCNNNNNNNGC 6 cut(s) 57, 127, 282, 291, 300, 392
HpySE526I ACGT 5 cut(s) 12, 54, 189, 222, 477
Hsp92II CATG 4 cut(s) 280, 298, 703, 722
HspAI GCGC 4 cut(s) 7, 38, 128, 443
Kzo9I GATC 2 cut(s) 142, 397
LmnI GCTCC 6 cut(s) 26, 409, 514, 655, 683, 715
LpnPI CCDG 8 cut(s) 82, 128, 167, 214, 241, 258, 363, 406
Lsp1109I GCAGC 3 cut(s) 294, 424, 606
LweI GCATC 2 cut(s) 108, 382
MabI ACCWGGT 1 cut(s) 227
MaeI CTAG 2 cut(s) 696, 744
MaeII ACGT 5 cut(s) 12, 54, 189, 222, 477
MaeIII GTNAC 1 cut(s) 223
MalI GATC 2 cut(s) 144, 399
MboI GATC 2 cut(s) 142, 397
MboII GAAGA 4 cut(s) 152, 160, 212, 223
MflI RGATCY 2 cut(s) 142, 397
MhlI GDGCHC 2 cut(s) 23, 305
MluCI AATT 1 cut(s) 748
MluI ACGCGT 1 cut(s) 99
MlyI GAGTC 1 cut(s) 243
MmeI TCCRAC 1 cut(s) 615
MroXI GAANNNNTTC 1 cut(s) 752
MseI TTAA 1 cut(s) 459
MspA1I CMGCKG 1 cut(s) 619
MspI CCGG 3 cut(s) 69, 245, 350
MspR9I CCNGG 4 cut(s) 70, 229, 246, 351
MvaI CCWGG 1 cut(s) 229
MvnI CGCG 5 cut(s) 38, 101, 128, 443, 445
MwoI GCNNNNNNNGC 6 cut(s) 57, 127, 282, 291, 300, 392
NciI CCSGG 3 cut(s) 70, 246, 351
NdeI CATATG 2 cut(s) 317, 495
NdeII GATC 2 cut(s) 142, 397
NlaIII CATG 4 cut(s) 280, 298, 703, 722
NlaIV GGNNCC 2 cut(s) 73, 685
NmeAIII GCCGAG 1 cut(s) 712
NmuCI GTSAC 1 cut(s) 223
NsbI TGCGCA 1 cut(s) 8
PcsI WCGNNNNNNNCGW 2 cut(s) 93, 447
PdmI GAANNNNTTC 1 cut(s) 752
PfeI GAWTC 4 cut(s) 43, 371, 613, 732
Pfl23II CGTACG 3 cut(s) 102, 306, 438
PflFI GACNNNGTC 1 cut(s) 229
PkrI GCNGC 7 cut(s) 6, 284, 313, 414, 427, 621, 624
PleI GAGTC 1 cut(s) 243
PmaCI CACGTG 1 cut(s) 55
PmlI CACGTG 1 cut(s) 55
PpsI GAGTC 1 cut(s) 243
Ppu21I YACGTR 1 cut(s) 55
PsiI TTATAA 1 cut(s) 786
Psp124BI GAGCTC 1 cut(s) 23
Psp1406I AACGTT 1 cut(s) 12
Psp6I CCWGG 1 cut(s) 227
PspCI CACGTG 1 cut(s) 55
PspGI CCWGG 1 cut(s) 227
PspLI CGTACG 3 cut(s) 102, 306, 438
PspN4I GGNNCC 2 cut(s) 73, 685
PspPI GGNCC 4 cut(s) 72, 89, 112, 231
PsuI RGATCY 2 cut(s) 142, 397
PsyI GACNNNGTC 1 cut(s) 229
PvuII CAGCTG 1 cut(s) 619
RsaI GTAC 3 cut(s) 104, 308, 440
RsaNI GTAC 3 cut(s) 103, 307, 439
SacI GAGCTC 1 cut(s) 23
SalI GTCGAC 1 cut(s) 133
SaqAI TTAA 1 cut(s) 459
SatI GCNGC 7 cut(s) 5, 283, 312, 413, 426, 620, 623
Sau3AI GATC 2 cut(s) 142, 397
Sau96I GGNCC 4 cut(s) 72, 89, 112, 231
SchI GAGTC 1 cut(s) 243
ScrFI CCNGG 4 cut(s) 70, 229, 246, 351
SduI GDGCHC 2 cut(s) 23, 305
SexAI ACCWGGT 1 cut(s) 227
SfaNI GCATC 2 cut(s) 108, 382
SgrDI CGTCGACG 1 cut(s) 133
SinI GGWCC 3 cut(s) 72, 112, 231
Sse9I AATT 1 cut(s) 748
SspMI CTAG 2 cut(s) 696, 744
SstI GAGCTC 1 cut(s) 23
StyD4I CCNGG 4 cut(s) 68, 227, 244, 349
StyI CCWWGG 1 cut(s) 149
TaiI ACGT 5 cut(s) 15, 57, 192, 225, 480
TaqI TCGA 2 cut(s) 96, 134
TasI AATT 1 cut(s) 748
TauI GCSGC 3 cut(s) 314, 428, 625
TfiI GAWTC 4 cut(s) 43, 371, 613, 732
Tru1I TTAA 1 cut(s) 459
Tru9I TTAA 1 cut(s) 459
TseFI GTSAC 1 cut(s) 223
TseI GCWGC 4 cut(s) 4, 282, 412, 619
Tsp45I GTSAC 1 cut(s) 223
TspDTI ATGAA 4 cut(s) 213, 231, 587, 716
TspGWI ACGGA 4 cut(s) 13, 120, 152, 223
Tth111I GACNNNGTC 1 cut(s) 229
VpaK11BI GGWCC 3 cut(s) 72, 112, 231
XapI RAATTY 1 cut(s) 748
XmiI GTMKAC 1 cut(s) 134
XmnI GAANNNNTTC 1 cut(s) 752
XspI CTAG 2 cut(s) 696, 744
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.