Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0000626

Physical Location & Seq

Genomic Coordinates Forward (+)

2731660 .. 2732911

Gene Structure 1252 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00159570.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1164 bp

ATGAGCTGGTGGTGGGCTGGAGCTATTAGCGCTGCCAAGAAAAAGTATGAAGAAGTTGAAGCGCCACGAACACCAAAGAGCGTGGGGTTAGTGATCGGTGTGACAGGCCAAGTGGGCAACAGCCTCGCCGAAATCCTACCAGTCTCAGACACGCCCGGCGGTCCATGGAAAGTCTACGGGGTCGCTCGCCGTCCCCGGCCAAACTGGGACATCGACCACCCGGTGGAGTACGTCCGGTGCGACATCTCCGACGCCGAAGACGTCAAAACCAAGCTTTCTCCGTTGGCTGATGTCACCCACATCTTCTACGTCACCTGGACCAGCCGGTCCACTGAGGCCGAGAGTTGCTCGGTCAACGGCGCCATGCTGCGCAACGTTTTGAGCTCCGTCATCCCGAACGCGCCGAATCTCCGCCACGTGTGTCTCCTCACCGGGACCAAGCACTACGACGGGCCGTTCGACGAGTACGGAAAGGTCCAAATGCACGACGCGCCGTCTACGGAAGATCTGCCAAGGTTGAATGTCCCGCTCTTCTATTACACTCTGGAGGACGTGTTGTATGAAGAGGCGGGGAAGAATGAAAACATCACCTGGTCCGTTCACCGACCCGGACTCATATTCGGGTTGTCGCCTTATAGCATGAGCAGTATAGTGAGCATGATGTGCTCGTACGCCGCAATATGCAAGCACGAGGGGTTGCCGTTGAGGTTTCCGGGGAGGAGAGAGGGTTGGGAATCGTATTCGGAGGCTTCGGACGCGGATCTGATAGCGGAGCAGCAAATCTGGGCGGCGGTTGACCCGTACGCGCGGAACGAAGCGTTTAACATCAACAACGGGGACGTGTTCAAGTGGAAGCATATGTGGAAGGTGTTGGCGGAGCAGTATGAGATTGAGGAGTACGGTTTTGATGAGGGTTTCAGCTTGGCGGAGATGATGAAGAATAAGGGTGGCGTGTGGGATGAGATAGTGAGGGAGAATCAGCTGCGGCCGACGAAGTTGGAGGAGATGGGGATGTGGGAGCTTGTGGAGATTGTGTTGGGTGGAGGAGCCGAGTTGTCTAGCATGAACAAGAGTAAGGAGCATGGGTTTGTGGGATTCAGAAACTCTAGGAATTCCTTCGTTGCTTGGATTGATAAAGCAAAGGCTTATAAGATTGTGCCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006629 GO:0006950 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0008202 GO:0009611 GO:0010051 GO:0016491 GO:0016627 GO:0016628 GO:0032501 GO:0032502 GO:0035671 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0048856 GO:0050896 GO:0055114 GO:0071704 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Epimerase

Protein Analysis

387

Amino Acids

43.61

Weight (kDa)

5.28

Isoelectric Point (pI)

46.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PRISE	PF22917	87 - 297	3e-21	PRISE-like Rossmann-fold domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000626)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24220 AT4G24220
fragaria_vesca	FvH4_2g04580 FvH4_2g04580 FvH4_2g04580 FvH4_4g06071 FvH4_5g25130
malus_domestica	MD05G1094500.v1.1 MD05G1108300.v1.1 MD08G1088400.v1.1 MD15G1073200.v1.1 MD15G1073300.v1.1 MD15G1073400.v1.1 MD15G1073500.v1.1 MD15G1073600.v1.1
prunus_persica	Prupe.1G426100_v2.0.a1 Prupe.1G426100_v2.0.a1 Prupe.1G426200_v2.0.a1 Prupe.1G426300_v2.0.a1 Prupe.1G426400_v2.0.a1 Prupe.1G426400_v2.0.a1 Prupe.8G139400_v2.0.a1 Prupe.8G139400_v2.0.a1
pyrus_communis	pycom05g09350 pycom08g07190 pycom13g22780 pycom15g06840 pycom15g06850 pycom15g06870
rosa_chinensis	RchiOBHm_Chr6g0254161 RchiOBHm_Chr6g0254181 RchiOBHm_Chr6g0254191 RchiOBHm_Chr6g0309171 RchiOBHm_Chr6g0309181 RchiOBHm_Chr6g0309191 RchiOBHm_Chr6g0309201
rosa_laevigata	RLG00000010582 RLG00000010583 RLG00000014937 RLG00000014938
rosa_multiflora	Rmu_co8060540.1_g000001 Rmu_co8332663.1_g000001 Rmu_sc0000010.1_g000017 Rmu_sc0003711.1_g000008 Rmu_sc0016971.1_g000003 Rmu_sc0020102.1_g000006 Rmu_sc0020102.1_g000008
rosa_roxburghii	Rroxscaffold_7G00159570 Rroxscaffold_7G00159580 Rroxscaffold_7G00159590 Rroxscaffold_7G00211100
rosa_rugosa	Rorug05G0550400 Rorug06G0370100 Rorug06G0370300
rosa_samantha	Rh6AG066900 Rh6AG483200 Rh6AG483300 Rh6AG483400 Rh6BG059800 Rh6BG060000 Rh6BG492200 Rh6BG492300 Rh6BG492500 Rh6CG059700 Rh6CG059800 Rh6CG496900 Rh6CG497000 Rh6CG497200 Rh6CG497400 Rh6DG056700 Rh6DG056800 Rh6DG483800 Rh6DG484000
rosa_wichuraiana	Rw6G005860 Rw6G005870 Rw6G042070 Rw6G042080 Rw6G042090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1149
AasI	GACNNNNNNGTC	1 cut(s)	325
AatII	GACGTC	1 cut(s)	264
Acc16I	TGCGCA	1 cut(s)	371
AccB1I	GGYRCC	1 cut(s)	359
AccB7I	CCANNNNNTGG	1 cut(s)	223
AccBSI	CCGCTC	1 cut(s)	529
AccI	GTMKAC	2 cut(s)	174, 497
AccII	CGCG	5 cut(s)	401, 491, 758, 806, 808
AclI	AACGTT	1 cut(s)	375
AclWI	GGATC	1 cut(s)	768
AcoI	YGGCCR	2 cut(s)	197, 986
AcsI	RAATTY	1 cut(s)	1111
AcvI	CACGTG	1 cut(s)	418
AcyI	GRCGYC	3 cut(s)	252, 261, 360
AdeI	CACNNNGTG	1 cut(s)	223
AfaI	GTAC	5 cut(s)	230, 467, 671, 803, 899
AfeI	AGCGCT	1 cut(s)	31
AfiI	CCNNNNNNNGG	1 cut(s)	223
AflIII	ACRYGT	3 cut(s)	417, 552, 840
AgsI	TTSAA	3 cut(s)	59, 520, 847
AhdI	GACNNNNNGTC	1 cut(s)	493
AjiI	CACGTC	2 cut(s)	553, 841
AjnI	CCWGG	2 cut(s)	314, 590
AluBI	AGCT	7 cut(s)	6, 23, 274, 384, 921, 982, 1021
AluI	AGCT	7 cut(s)	6, 23, 274, 384, 921, 982, 1021
Alw21I	GWGCWC	2 cut(s)	386, 668
Alw26I	GTCTC	2 cut(s)	148, 428
AlwI	GGATC	1 cut(s)	768
Aor51HI	AGCGCT	1 cut(s)	31
AoxI	GGCC	5 cut(s)	106, 197, 336, 452, 986
ApeKI	GCWGC	4 cut(s)	32, 367, 775, 982
ApoI	RAATTY	1 cut(s)	1111
ArsI	GACNNNNNNTTYG	2 cut(s)	440, 472
Asp700I	GAANNNNTTC	1 cut(s)	1115
AspLEI	GCGC	7 cut(s)	32, 64, 362, 372, 403, 493, 808
AspS9I	GGNCC	7 cut(s)	161, 318, 327, 435, 452, 475, 594
AsuC2I	CCSGG	6 cut(s)	156, 196, 221, 433, 609, 714
AsuHPI	GGTGA	5 cut(s)	286, 304, 421, 580, 593
AvaII	GGWCC	6 cut(s)	161, 318, 327, 435, 475, 594
BanI	GGYRCC	1 cut(s)	359
BanII	GRGCYC	1 cut(s)	386
BauI	CACGAG	1 cut(s)	689
BbrPI	CACGTG	1 cut(s)	418
BbsI	GAAGAC	1 cut(s)	264
Bbv12I	GWGCWC	2 cut(s)	386, 668
BbvI	GCAGC	4 cut(s)	19, 354, 787, 969
BccI	CCATC	1 cut(s)	1000
BceAI	ACGGC	5 cut(s)	174, 373, 439, 478, 685
BcgI	CGANNNNNNTGC	2 cut(s)	106, 140
BciT130I	CCWGG	2 cut(s)	316, 592
BcnI	CCSGG	6 cut(s)	156, 196, 221, 433, 609, 714
BcoDI	GTCTC	2 cut(s)	148, 428
BfaI	CTAG	2 cut(s)	1059, 1107
BfoI	RGCGCY	3 cut(s)	33, 65, 363
BglI	GCCNNNNNGGC	1 cut(s)	114
BglII	AGATCT	1 cut(s)	505
BisI	GCNGC	7 cut(s)	33, 368, 675, 776, 789, 983, 986
BlsI	GCNGC	7 cut(s)	34, 369, 676, 777, 790, 984, 987
Bme1390I	CCNGG	8 cut(s)	156, 196, 221, 316, 433, 592, 609, 714
Bme18I	GGWCC	6 cut(s)	161, 318, 327, 435, 475, 594
BmeRI	GACNNNNNGTC	1 cut(s)	493
BmgBI	CACGTC	2 cut(s)	553, 841
BmgT120I	GGNCC	7 cut(s)	161, 318, 327, 435, 452, 475, 594
BmiI	GGNNCC	3 cut(s)	361, 436, 1048
BmrFI	CCNGG	8 cut(s)	156, 196, 221, 316, 433, 592, 609, 714
BmrI	ACTGGG	1 cut(s)	214
BmuI	ACTGGG	1 cut(s)	214
BpiI	GAAGAC	1 cut(s)	264
BplI	GAGNNNNNCTC	2 cut(s)	332, 364
BpmI	CTGGAG	2 cut(s)	39, 566
BpuMI	CCSGG	6 cut(s)	156, 196, 221, 433, 609, 714
BsaAI	YACGTR	1 cut(s)	418
BsaHI	GRCGYC	3 cut(s)	252, 261, 360
BsaJI	CCNNGG	4 cut(s)	164, 194, 512, 713
BsaWI	WCCGGW	1 cut(s)	234
BsaXI	ACNNNNNCTCC	8 cut(s)	539, 569, 712, 742, 1019, 1049, 1070, 1100
Bsc4I	CCNNNNNNNGG	1 cut(s)	223
Bse118I	RCCGGY	1 cut(s)	324
Bse1I	ACTGG	2 cut(s)	140, 209
BseBI	CCWGG	2 cut(s)	316, 592
BseDI	CCNNGG	4 cut(s)	164, 194, 512, 713
BseGI	GGATG	3 cut(s)	390, 964, 1017
BseLI	CCNNNNNNNGG	1 cut(s)	223
BseMII	CTCAG	2 cut(s)	159, 324
BseNI	ACTGG	2 cut(s)	140, 209
BseRI	GAGGAG	5 cut(s)	416, 733, 908, 1016, 1059
BseX3I	CGGCCG	1 cut(s)	986
BseXI	GCAGC	4 cut(s)	19, 354, 787, 969
Bsh1236I	CGCG	5 cut(s)	401, 491, 758, 806, 808
Bsh1285I	CGRYCG	1 cut(s)	989
BshFI	GGCC	5 cut(s)	108, 199, 338, 454, 988
BshNI	GGYRCC	1 cut(s)	359
BsiEI	CGRYCG	1 cut(s)	989
BsiHKAI	GWGCWC	2 cut(s)	386, 668
BsiSI	CCGG	8 cut(s)	156, 196, 221, 235, 325, 432, 609, 713
BsiWI	CGTACG	2 cut(s)	669, 801
BslFI	GGGAC	5 cut(s)	177, 221, 448, 509, 851
BslI	CCNNNNNNNGG	1 cut(s)	223
BsmAI	GTCTC	2 cut(s)	148, 428
BsmFI	GGGAC	5 cut(s)	177, 221, 448, 509, 851
BsnI	GGCC	5 cut(s)	108, 199, 338, 454, 988
Bsp1286I	GDGCHC	2 cut(s)	386, 668
Bsp143I	GATC	3 cut(s)	93, 505, 760
Bsp19I	CCATGG	1 cut(s)	164
BspANI	GGCC	5 cut(s)	108, 199, 338, 454, 988
BspCNI	CTCAG	2 cut(s)	158, 325
BspFNI	CGCG	5 cut(s)	401, 491, 758, 806, 808
BspLI	GGNNCC	3 cut(s)	361, 436, 1048
BspPI	GGATC	1 cut(s)	768
BspQI	GCTCTTC	1 cut(s)	536
BspT107I	GGYRCC	1 cut(s)	359
BsrBI	CCGCTC	1 cut(s)	529
BsrFI	RCCGGY	1 cut(s)	324
BsrI	ACTGG	2 cut(s)	140, 209
BssAI	RCCGGY	1 cut(s)	324
BssECI	CCNNGG	4 cut(s)	164, 194, 512, 713
BssMI	GATC	3 cut(s)	93, 505, 760
BssNI	GRCGYC	3 cut(s)	252, 261, 360
BssSI	CACGAG	1 cut(s)	689
BssT1I	CCWWGG	2 cut(s)	164, 512
Bst2BI	CACGAG	1 cut(s)	689
Bst2UI	CCWGG	2 cut(s)	316, 592
Bst4CI	ACNGT	1 cut(s)	902
Bst6I	CTCTTC	2 cut(s)	536, 558
BstACI	GRCGYC	3 cut(s)	252, 261, 360
BstAPI	GCANNNNNTGC	1 cut(s)	663
BstBAI	YACGTR	1 cut(s)	418
BstC8I	GCNNGC	2 cut(s)	187, 686
BstDEI	CTNAG	2 cut(s)	145, 333
BstDSI	CCRYGG	1 cut(s)	164
BstF5I	GGATG	3 cut(s)	390, 964, 1017
BstFNI	CGCG	5 cut(s)	401, 491, 758, 806, 808
BstH2I	RGCGCY	3 cut(s)	33, 65, 363
BstHHI	GCGC	7 cut(s)	32, 64, 362, 372, 403, 493, 808
BstKTI	GATC	3 cut(s)	96, 508, 763
BstMAI	GTCTC	2 cut(s)	148, 428
BstMBI	GATC	3 cut(s)	93, 505, 760
BstMCI	CGRYCG	1 cut(s)	989
BstMWI	GCNNNNNNNGC	5 cut(s)	29, 114, 490, 663, 755
BstNI	CCWGG	2 cut(s)	316, 592
BstSCI	CCNGG	8 cut(s)	154, 194, 219, 314, 431, 590, 607, 712
BstUI	CGCG	5 cut(s)	401, 491, 758, 806, 808
BstV1I	GCAGC	4 cut(s)	19, 354, 787, 969
BstV2I	GAAGAC	1 cut(s)	264
BstX2I	RGATCY	2 cut(s)	505, 760
BstYI	RGATCY	2 cut(s)	505, 760
BstZI	CGGCCG	1 cut(s)	986
BsuRI	GGCC	5 cut(s)	108, 199, 338, 454, 988
BtgI	CCRYGG	1 cut(s)	164
BtrI	CACGTC	2 cut(s)	553, 841
BtsCI	GGATG	3 cut(s)	390, 964, 1017
BtsIMutI	CAGTG	1 cut(s)	330
Cac8I	GCNNGC	2 cut(s)	187, 686
CfoI	GCGC	7 cut(s)	32, 64, 362, 372, 403, 493, 808
Cfr10I	RCCGGY	1 cut(s)	324
Cfr13I	GGNCC	7 cut(s)	161, 318, 327, 435, 452, 475, 594
CseI	GACGC	3 cut(s)	260, 497, 764
CsiI	ACCWGGT	1 cut(s)	590
Csp6I	GTAC	5 cut(s)	229, 466, 670, 802, 898
CspCI	CAANNNNNGTGG	2 cut(s)	63, 98
CviAII	CATG	6 cut(s)	165, 364, 640, 658, 1063, 1082
CviQI	GTAC	5 cut(s)	229, 466, 670, 802, 898
DdeI	CTNAG	2 cut(s)	145, 333
DinI	GGCGCC	1 cut(s)	361
DpnI	GATC	3 cut(s)	95, 507, 762
DpnII	GATC	3 cut(s)	93, 505, 760
DraIII	CACNNNGTG	1 cut(s)	223
DrdI	GACNNNNNNGTC	1 cut(s)	325
DriI	GACNNNNNGTC	1 cut(s)	493
DseDI	GACNNNNNNGTC	1 cut(s)	325
EaeI	YGGCCR	2 cut(s)	197, 986
EagI	CGGCCG	1 cut(s)	986
Eam1104I	CTCTTC	2 cut(s)	536, 558
Eam1105I	GACNNNNNGTC	1 cut(s)	493
EarI	CTCTTC	2 cut(s)	536, 558
EciI	GGCGGA	3 cut(s)	401, 890, 941
Ecl136II	GAGCTC	1 cut(s)	384
EclXI	CGGCCG	1 cut(s)	986
Eco130I	CCWWGG	2 cut(s)	164, 512
Eco24I	GRGCYC	1 cut(s)	386
Eco47I	GGWCC	6 cut(s)	161, 318, 327, 435, 475, 594
Eco47III	AGCGCT	1 cut(s)	31
Eco52I	CGGCCG	1 cut(s)	986
Eco53kI	GAGCTC	1 cut(s)	384
Eco72I	CACGTG	1 cut(s)	418
EcoICRI	GAGCTC	1 cut(s)	384
EcoRI	GAATTC	1 cut(s)	1111
EcoRII	CCWGG	2 cut(s)	314, 590
EcoT14I	CCWWGG	2 cut(s)	164, 512
EcoT38I	GRGCYC	1 cut(s)	386
EgeI	GGCGCC	1 cut(s)	361
EheI	GGCGCC	1 cut(s)	361
ErhI	CCWWGG	2 cut(s)	164, 512
FaeI	CATG	6 cut(s)	168, 367, 643, 661, 1066, 1085
FaqI	GGGAC	5 cut(s)	177, 221, 448, 509, 851
FatI	CATG	6 cut(s)	164, 363, 639, 657, 1062, 1081
FauI	CCCGC	2 cut(s)	534, 562
FauNDI	CATATG	1 cut(s)	858
FblI	GTMKAC	2 cut(s)	174, 497
Fnu4HI	GCNGC	7 cut(s)	33, 368, 675, 776, 789, 983, 986
FokI	GGATG	3 cut(s)	377, 971, 1024
FriOI	GRGCYC	1 cut(s)	386
Fsp4HI	GCNGC	7 cut(s)	33, 368, 675, 776, 789, 983, 986
FspBI	CTAG	2 cut(s)	1059, 1107
FspI	TGCGCA	1 cut(s)	371
GlaI	GCGC	7 cut(s)	31, 63, 361, 371, 402, 492, 807
GluI	GCNGC	7 cut(s)	33, 368, 675, 776, 789, 983, 986
GsuI	CTGGAG	2 cut(s)	39, 566
HaeII	RGCGCY	3 cut(s)	33, 65, 363
HaeIII	GGCC	5 cut(s)	108, 199, 338, 454, 988
HapII	CCGG	8 cut(s)	156, 196, 221, 235, 325, 432, 609, 713
HgaI	GACGC	3 cut(s)	260, 497, 764
HhaI	GCGC	7 cut(s)	32, 64, 362, 372, 403, 493, 808
Hin1I	GRCGYC	3 cut(s)	252, 261, 360
Hin1II	CATG	6 cut(s)	168, 367, 643, 661, 1066, 1085
Hin6I	GCGC	7 cut(s)	30, 62, 360, 370, 401, 491, 806
HinP1I	GCGC	7 cut(s)	30, 62, 360, 370, 401, 491, 806
HincII	GTYRAC	2 cut(s)	355, 796
HindII	GTYRAC	2 cut(s)	355, 796
HindIII	AAGCTT	1 cut(s)	272
HinfI	GANTC	5 cut(s)	406, 612, 734, 976, 1095
HpaII	CCGG	8 cut(s)	156, 196, 221, 235, 325, 432, 609, 713
HphI	GGTGA	5 cut(s)	286, 304, 421, 580, 593
Hpy166II	GTNNAC	6 cut(s)	175, 330, 355, 498, 601, 796
Hpy188I	TCNGA	6 cut(s)	148, 250, 745, 754, 765, 1100
Hpy188III	TCNNGA	2 cut(s)	394, 545
Hpy8I	GTNNAC	6 cut(s)	175, 330, 355, 498, 601, 796
Hpy99I	CGWCG	5 cut(s)	254, 452, 464, 491, 994
HpyAV	CCTTC	2 cut(s)	859, 1126
HpyCH4III	ACNGT	1 cut(s)	902
HpyCH4IV	ACGT	7 cut(s)	231, 261, 309, 375, 417, 552, 840
HpyCH4V	TGCA	2 cut(s)	484, 684
HpyF10VI	GCNNNNNNNGC	5 cut(s)	29, 114, 490, 663, 755
HpyF3I	CTNAG	2 cut(s)	145, 333
HpySE526I	ACGT	7 cut(s)	231, 261, 309, 375, 417, 552, 840
Hsp92I	GRCGYC	3 cut(s)	252, 261, 360
Hsp92II	CATG	6 cut(s)	168, 367, 643, 661, 1066, 1085
HspAI	GCGC	7 cut(s)	30, 62, 360, 370, 401, 491, 806
KasI	GGCGCC	1 cut(s)	359
Kzo9I	GATC	3 cut(s)	93, 505, 760
LguI	GCTCTTC	1 cut(s)	536
LmnI	GCTCC	7 cut(s)	20, 389, 772, 877, 1018, 1046, 1078
Lsp1109I	GCAGC	4 cut(s)	19, 354, 787, 969
MabI	ACCWGGT	1 cut(s)	590
MaeI	CTAG	2 cut(s)	1059, 1107
MaeII	ACGT	7 cut(s)	231, 261, 309, 375, 417, 552, 840
MaeIII	GTNAC	3 cut(s)	100, 292, 310
MalI	GATC	3 cut(s)	95, 507, 762
MbiI	CCGCTC	1 cut(s)	529
MboI	GATC	3 cut(s)	93, 505, 760
MboII	GAAGA	8 cut(s)	62, 269, 295, 515, 523, 575, 586, 949
MflI	RGATCY	2 cut(s)	505, 760
MhlI	GDGCHC	2 cut(s)	386, 668
MluCI	AATT	1 cut(s)	1111
Mly113I	GGCGCC	1 cut(s)	360
MlyI	GAGTC	1 cut(s)	606
MmeI	TCCRAC	2 cut(s)	273, 978
MroXI	GAANNNNTTC	1 cut(s)	1115
MseI	TTAA	2 cut(s)	822, 1162
MspA1I	CMGCKG	1 cut(s)	982
MspI	CCGG	8 cut(s)	156, 196, 221, 235, 325, 432, 609, 713
MspR9I	CCNGG	8 cut(s)	156, 196, 221, 316, 433, 592, 609, 714
MvaI	CCWGG	2 cut(s)	316, 592
MvnI	CGCG	5 cut(s)	401, 491, 758, 806, 808
MwoI	GCNNNNNNNGC	5 cut(s)	29, 114, 490, 663, 755
NarI	GGCGCC	1 cut(s)	360
NciI	CCSGG	6 cut(s)	156, 196, 221, 433, 609, 714
NcoI	CCATGG	1 cut(s)	164
NdeI	CATATG	1 cut(s)	858
NdeII	GATC	3 cut(s)	93, 505, 760
NlaIII	CATG	6 cut(s)	168, 367, 643, 661, 1066, 1085
NlaIV	GGNNCC	3 cut(s)	361, 436, 1048
NmeAIII	GCCGAG	2 cut(s)	364, 1075
NmuCI	GTSAC	3 cut(s)	100, 292, 310
NsbI	TGCGCA	1 cut(s)	371
PciSI	GCTCTTC	1 cut(s)	536
PcsI	WCGNNNNNNNCGW	4 cut(s)	237, 258, 456, 810
PdmI	GAANNNNTTC	1 cut(s)	1115
PfeI	GAWTC	4 cut(s)	406, 734, 976, 1095
Pfl23II	CGTACG	2 cut(s)	669, 801
PflMI	CCANNNNNTGG	1 cut(s)	223
PkrI	GCNGC	7 cut(s)	34, 369, 676, 777, 790, 984, 987
PleI	GAGTC	1 cut(s)	606
PluTI	GGCGCC	1 cut(s)	363
PmaCI	CACGTG	1 cut(s)	418
PmlI	CACGTG	1 cut(s)	418
PpsI	GAGTC	1 cut(s)	606
Ppu21I	YACGTR	1 cut(s)	418
PsiI	TTATAA	1 cut(s)	1149
Psp124BI	GAGCTC	1 cut(s)	386
Psp1406I	AACGTT	1 cut(s)	375
Psp6I	CCWGG	2 cut(s)	314, 590
PspCI	CACGTG	1 cut(s)	418
PspGI	CCWGG	2 cut(s)	314, 590
PspLI	CGTACG	2 cut(s)	669, 801
PspN4I	GGNNCC	3 cut(s)	361, 436, 1048
PspPI	GGNCC	7 cut(s)	161, 318, 327, 435, 452, 475, 594
PsuI	RGATCY	2 cut(s)	505, 760
PvuII	CAGCTG	1 cut(s)	982
RsaI	GTAC	5 cut(s)	230, 467, 671, 803, 899
RsaNI	GTAC	5 cut(s)	229, 466, 670, 802, 898
SacI	GAGCTC	1 cut(s)	386
SapI	GCTCTTC	1 cut(s)	536
SaqAI	TTAA	2 cut(s)	822, 1162
SatI	GCNGC	7 cut(s)	33, 368, 675, 776, 789, 983, 986
Sau3AI	GATC	3 cut(s)	93, 505, 760
Sau96I	GGNCC	7 cut(s)	161, 318, 327, 435, 452, 475, 594
SchI	GAGTC	1 cut(s)	606
ScrFI	CCNGG	8 cut(s)	156, 196, 221, 316, 433, 592, 609, 714
SduI	GDGCHC	2 cut(s)	386, 668
SexAI	ACCWGGT	1 cut(s)	590
SfoI	GGCGCC	1 cut(s)	361
SinI	GGWCC	6 cut(s)	161, 318, 327, 435, 475, 594
Sse9I	AATT	1 cut(s)	1111
SspDI	GGCGCC	1 cut(s)	359
SspMI	CTAG	2 cut(s)	1059, 1107
SstI	GAGCTC	1 cut(s)	386
StyD4I	CCNGG	8 cut(s)	154, 194, 219, 314, 431, 590, 607, 712
StyI	CCWWGG	2 cut(s)	164, 512
TaaI	ACNGT	1 cut(s)	902
TaiI	ACGT	7 cut(s)	234, 264, 312, 378, 420, 555, 843
TaqI	TCGA	2 cut(s)	213, 459
TaqII	GACCGA	1 cut(s)	340
TasI	AATT	1 cut(s)	1111
TauI	GCSGC	3 cut(s)	677, 791, 988
TfiI	GAWTC	4 cut(s)	406, 734, 976, 1095
Tru1I	TTAA	2 cut(s)	822, 1162
Tru9I	TTAA	2 cut(s)	822, 1162
TscAI	CASTG	1 cut(s)	337
TseFI	GTSAC	3 cut(s)	100, 292, 310
TseI	GCWGC	4 cut(s)	32, 367, 775, 982
Tsp45I	GTSAC	3 cut(s)	100, 292, 310
TspDTI	ATGAA	5 cut(s)	63, 576, 594, 950, 1079
TspGWI	ACGGA	5 cut(s)	270, 376, 483, 515, 586
TspRI	CASTG	1 cut(s)	337
Van91I	CCANNNNNTGG	1 cut(s)	223
VpaK11BI	GGWCC	6 cut(s)	161, 318, 327, 435, 475, 594
XapI	RAATTY	1 cut(s)	1111
XmiI	GTMKAC	2 cut(s)	174, 497
XmnI	GAANNNNTTC	1 cut(s)	1115
XspI	CTAG	2 cut(s)	1059, 1107
ZraI	GACGTC	1 cut(s)	262

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.