DEAD DEAH box RNA helicase family protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G35530 AT1G35530 AT1G35530 AT1G35530 AT1G35530 AT1G36020 |
| fragaria_vesca | FvH4_7g03750 |
| malus_domestica | MD15G1404400.v1.1 |
| prunus_persica | Prupe.1G551100_v2.0.a1 Prupe.2G019600_v2.0.a1 Prupe.2G019700_v2.0.a1 |
| pyrus_communis | pycom15g36170 pycom15g36180 |
| rosa_chinensis | RchiOBHm_Chr7g0228871 RchiOBHm_Chr7g0228881 RchiOBHm_Chr7g0228951 |
| rosa_laevigata | RLG00000001539 RLG00000002150 RLG00000022432 |
| rosa_multiflora | Rmu_sc0000721.1_g000006 Rmu_sc0004517.1_g000001 Rmu_sc0005913.1_g000001 Rmu_sc0005913.1_g000026 Rmu_sc0011218.1_g000006 Rmu_sc0013945.1_g000010 |
| rosa_roxburghii | Rroxscaffold_3G00230830 Rroxscaffold_3G00238230 |
| rosa_rugosa | Rorug07G0252600 Rorug07G0254200 |
| rosa_samantha | Rh7AG405800 Rh7BG333000 Rh7BG385100 Rh7BG385200 Rh7BG385300 Rh7CG423400 Rh7DG341000 Rh7DG399800 Rh7DG399900 |
| rosa_wichuraiana | Rw7G033620 Rw7G033650 Rw7G033670 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2998 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 953 |
| Acc36I | ACCTGC | 1 cut(s) | 2998 |
| AccB1I | GGYRCC | 1 cut(s) | 3691 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 706 |
| AccII | CGCG | 1 cut(s) | 3280 |
| AccIII | TCCGGA | 1 cut(s) | 2453 |
| AciI | CCGC | 2 cut(s) | 489, 3588 |
| AclWI | GGATC | 4 cut(s) | 880, 1436, 1903, 3318 |
| AcsI | RAATTY | 9 cut(s) | 178, 846, 1145, 1474, 1616, 2557, 2733, 2761, 3108 |
| AcuI | CTGAAG | 5 cut(s) | 2352, 2562, 2628, 3462, 3846 |
| AfaI | GTAC | 6 cut(s) | 380, 3160, 3403, 3574, 3772, 3841 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 706, 1797, 2214, 2239, 2470, 3648, 3955 |
| AflII | CTTAAG | 1 cut(s) | 2672 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 721 |
| AjiI | CACGTC | 1 cut(s) | 4000 |
| AjnI | CCWGG | 9 cut(s) | 99, 214, 266, 1064, 1671, 2389, 2699, 3031, 3856 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 163, 195, 1188, 1220 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 2370, 2402, 3923, 3955 |
| Alw21I | GWGCWC | 4 cut(s) | 1213, 1384, 2412, 2871 |
| AlwI | GGATC | 4 cut(s) | 880, 1436, 1903, 3318 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 3485, 3959 |
| Ama87I | CYCGRG | 1 cut(s) | 3642 |
| Aor13HI | TCCGGA | 1 cut(s) | 2453 |
| AoxI | GGCC | 6 cut(s) | 102, 269, 1262, 1579, 1669, 4027 |
| ApoI | RAATTY | 9 cut(s) | 178, 846, 1145, 1474, 1616, 2557, 2733, 2761, 3108 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1917, 1949 |
| AseI | ATTAAT | 1 cut(s) | 2051 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 793, 2310, 2733, 3803 |
| AspLEI | GCGC | 4 cut(s) | 1743, 3280, 3282, 4054 |
| AspS9I | GGNCC | 5 cut(s) | 1669, 1933, 2615, 3392, 4027 |
| AsuC2I | CCSGG | 4 cut(s) | 308, 870, 3643, 3644 |
| AsuII | TTCGAA | 1 cut(s) | 3797 |
| AvaI | CYCGRG | 1 cut(s) | 3642 |
| AvaII | GGWCC | 3 cut(s) | 1933, 2615, 3392 |
| BanI | GGYRCC | 1 cut(s) | 3691 |
| BanII | GRGCYC | 3 cut(s) | 1118, 2871, 3190 |
| BauI | CACGAG | 1 cut(s) | 1037 |
| BbsI | GAAGAC | 3 cut(s) | 2592, 2847, 3442 |
| Bbv12I | GWGCWC | 4 cut(s) | 1213, 1384, 2412, 2871 |
| BbvCI | CCTCAGC | 2 cut(s) | 273, 3468 |
| BceAI | ACGGC | 3 cut(s) | 242, 444, 2894 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2141, 2175 |
| BciT130I | CCWGG | 9 cut(s) | 101, 216, 268, 1066, 1673, 2391, 2701, 3033, 3858 |
| BciVI | GTATCC | 1 cut(s) | 1625 |
| BclI | TGATCA | 1 cut(s) | 1423 |
| BcnI | CCSGG | 4 cut(s) | 308, 870, 3643, 3644 |
| BfmI | CTRYAG | 2 cut(s) | 3918, 3960 |
| BfrI | CTTAAG | 1 cut(s) | 2672 |
| BfuAI | ACCTGC | 1 cut(s) | 2998 |
| BfuI | GTATCC | 1 cut(s) | 1625 |
| BglII | AGATCT | 3 cut(s) | 2626, 3374, 3908 |
| BmcAI | AGTACT | 1 cut(s) | 3574 |
| Bme18I | GGWCC | 3 cut(s) | 1933, 2615, 3392 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 721 |
| BmeT110I | CYCGRG | 1 cut(s) | 3642 |
| BmgBI | CACGTC | 1 cut(s) | 4000 |
| BmgT120I | GGNCC | 5 cut(s) | 1669, 1933, 2615, 3392, 4027 |
| BmiI | GGNNCC | 4 cut(s) | 521, 2617, 3693, 4113 |
| BmrI | ACTGGG | 2 cut(s) | 377, 2613 |
| BmsI | GCATC | 7 cut(s) | 668, 1495, 1699, 2175, 2437, 2828, 3976 |
| BmuI | ACTGGG | 2 cut(s) | 377, 2613 |
| BpiI | GAAGAC | 3 cut(s) | 2592, 2847, 3442 |
| BpmI | CTGGAG | 4 cut(s) | 728, 1146, 1206, 3270 |
| Bpu10I | CCTNAGC | 2 cut(s) | 273, 3468 |
| Bpu14I | TTCGAA | 1 cut(s) | 3797 |
| BpuEI | CTTGAG | 1 cut(s) | 2258 |
| BpuMI | CCSGG | 4 cut(s) | 308, 870, 3643, 3644 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2958 |
| BsaWI | WCCGGW | 3 cut(s) | 1927, 1935, 2453 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 971, 1001, 1922, 1952, 2769, 2799, 3923, 3953 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 706, 1797, 2214, 2239, 2470, 3648, 3955 |
| Bse3DI | GCAATG | 7 cut(s) | 943, 1008, 1053, 2195, 3070, 3623, 4061 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2958 |
| BseAI | TCCGGA | 1 cut(s) | 2453 |
| BseBI | CCWGG | 9 cut(s) | 101, 216, 268, 1066, 1673, 2391, 2701, 3033, 3858 |
| BseGI | GGATG | 9 cut(s) | 381, 659, 1510, 1911, 2248, 2709, 3161, 3737, 3795 |
| BseJI | GATNNNNATC | 1 cut(s) | 2958 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 706, 1797, 2214, 2239, 2470, 3648, 3955 |
| BseMI | GCAATG | 7 cut(s) | 943, 1008, 1053, 2195, 3070, 3623, 4061 |
| BsePI | GCGCGC | 1 cut(s) | 3278 |
| BseRI | GAGGAG | 4 cut(s) | 144, 2378, 3473, 3747 |
| BsgI | GTGCAG | 1 cut(s) | 813 |
| Bsh1236I | CGCG | 1 cut(s) | 3280 |
| BshFI | GGCC | 6 cut(s) | 104, 271, 1264, 1581, 1671, 4029 |
| BshNI | GGYRCC | 1 cut(s) | 3691 |
| BsiHKAI | GWGCWC | 4 cut(s) | 1213, 1384, 2412, 2871 |
| BsiHKCI | CYCGRG | 1 cut(s) | 3642 |
| BsiSI | CCGG | 7 cut(s) | 278, 307, 869, 1928, 1936, 2454, 3643 |
| BslFI | GGGAC | 7 cut(s) | 1374, 1508, 2231, 2462, 2601, 2894, 4010 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 706, 1797, 2214, 2239, 2470, 3648, 3955 |
| BsmFI | GGGAC | 7 cut(s) | 1374, 1508, 2231, 2462, 2601, 2894, 4010 |
| BsmI | GAATGC | 2 cut(s) | 2152, 2506 |
| BsnI | GGCC | 6 cut(s) | 104, 271, 1264, 1581, 1671, 4029 |
| BsoBI | CYCGRG | 1 cut(s) | 3642 |
| Bsp119I | TTCGAA | 1 cut(s) | 3797 |
| Bsp1286I | GDGCHC | 6 cut(s) | 1118, 1213, 1384, 2412, 2871, 3190 |
| Bsp13I | TCCGGA | 1 cut(s) | 2453 |
| Bsp1407I | TGTACA | 2 cut(s) | 3770, 3839 |
| Bsp19I | CCATGG | 1 cut(s) | 1252 |
| BspACI | CCGC | 2 cut(s) | 489, 3588 |
| BspANI | GGCC | 6 cut(s) | 104, 271, 1264, 1581, 1671, 4029 |
| BspEI | TCCGGA | 1 cut(s) | 2453 |
| BspFNI | CGCG | 1 cut(s) | 3280 |
| BspLI | GGNNCC | 4 cut(s) | 521, 2617, 3693, 4113 |
| BspMAI | CTGCAG | 2 cut(s) | 3922, 3964 |
| BspMI | ACCTGC | 1 cut(s) | 2998 |
| BspPI | GGATC | 4 cut(s) | 880, 1436, 1903, 3318 |
| BspT104I | TTCGAA | 1 cut(s) | 3797 |
| BspT107I | GGYRCC | 1 cut(s) | 3691 |
| BspTI | CTTAAG | 1 cut(s) | 2672 |
| BsrDI | GCAATG | 7 cut(s) | 943, 1008, 1053, 2195, 3070, 3623, 4061 |
| BsrGI | TGTACA | 2 cut(s) | 3770, 3839 |
| BssHII | GCGCGC | 1 cut(s) | 3278 |
| BssSI | CACGAG | 1 cut(s) | 1037 |
| BssT1I | CCWWGG | 4 cut(s) | 1252, 1901, 2489, 4091 |
| Bst2BI | CACGAG | 1 cut(s) | 1037 |
| Bst2UI | CCWGG | 9 cut(s) | 101, 216, 268, 1066, 1673, 2391, 2701, 3033, 3858 |
| Bst4CI | ACNGT | 7 cut(s) | 803, 1838, 2035, 2443, 3196, 3565, 3818 |
| Bst6I | CTCTTC | 2 cut(s) | 1659, 1768 |
| BstAFI | CTTAAG | 1 cut(s) | 2672 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2194 |
| BstAUI | TGTACA | 2 cut(s) | 3770, 3839 |
| BstBI | TTCGAA | 1 cut(s) | 3797 |
| BstDSI | CCRYGG | 2 cut(s) | 1252, 2876 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 2212, 2237 |
| BstF5I | GGATG | 9 cut(s) | 381, 659, 1510, 1911, 2248, 2709, 3161, 3737, 3795 |
| BstFNI | CGCG | 1 cut(s) | 3280 |
| BstHHI | GCGC | 4 cut(s) | 1743, 3280, 3282, 4054 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 74, 779, 860, 1357, 2194, 3625, 4049, 4102 |
| BstNI | CCWGG | 9 cut(s) | 101, 216, 268, 1066, 1673, 2391, 2701, 3033, 3858 |
| BstNSI | RCATGY | 4 cut(s) | 588, 735, 1861, 2652 |
| BstSFI | CTRYAG | 2 cut(s) | 3918, 3960 |
| BstUI | CGCG | 1 cut(s) | 3280 |
| BstV2I | GAAGAC | 3 cut(s) | 2592, 2847, 3442 |
| BstX2I | RGATCY | 3 cut(s) | 2626, 3374, 3908 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 251, 2933 |
| BstYI | RGATCY | 3 cut(s) | 2626, 3374, 3908 |
| BsuI | GTATCC | 1 cut(s) | 1625 |
| BsuRI | GGCC | 6 cut(s) | 104, 271, 1264, 1581, 1671, 4029 |
| BtgI | CCRYGG | 2 cut(s) | 1252, 2876 |
| BtrI | CACGTC | 1 cut(s) | 4000 |
| BtsCI | GGATG | 9 cut(s) | 381, 659, 1510, 1911, 2248, 2709, 3161, 3737, 3795 |
| BtsI | GCAGTG | 3 cut(s) | 1492, 2277, 4050 |
| BtsIMutI | CAGTG | 6 cut(s) | 808, 1492, 2277, 2626, 3698, 4050 |
| BveI | ACCTGC | 1 cut(s) | 2998 |
| CaiI | CAGNNNCTG | 2 cut(s) | 3485, 3959 |
| CfoI | GCGC | 4 cut(s) | 1743, 3280, 3282, 4054 |
| Cfr13I | GGNCC | 5 cut(s) | 1669, 1933, 2615, 3392, 4027 |
| Cfr9I | CCCGGG | 1 cut(s) | 3642 |
| CseI | GACGC | 2 cut(s) | 956, 4049 |
| Csp6I | GTAC | 6 cut(s) | 379, 3159, 3402, 3573, 3771, 3840 |
| CspCI | CAANNNNNGTGG | 6 cut(s) | 1639, 1674, 3052, 3087, 3205, 3240 |
| CviQI | GTAC | 6 cut(s) | 379, 3159, 3402, 3573, 3771, 3840 |
| DraI | TTTAAA | 1 cut(s) | 2256 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 953 |
| DriI | GACNNNNNGTC | 1 cut(s) | 721 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 953 |
| Eam1104I | CTCTTC | 2 cut(s) | 1659, 1768 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 721 |
| EarI | CTCTTC | 2 cut(s) | 1659, 1768 |
| Ecl136II | GAGCTC | 1 cut(s) | 2869 |
| Eco130I | CCWWGG | 4 cut(s) | 1252, 1901, 2489, 4091 |
| Eco147I | AGGCCT | 2 cut(s) | 104, 271 |
| Eco24I | GRGCYC | 3 cut(s) | 1118, 2871, 3190 |
| Eco32I | GATATC | 1 cut(s) | 1678 |
| Eco47I | GGWCC | 3 cut(s) | 1933, 2615, 3392 |
| Eco53kI | GAGCTC | 1 cut(s) | 2869 |
| Eco57I | CTGAAG | 5 cut(s) | 2352, 2562, 2628, 3462, 3846 |
| Eco88I | CYCGRG | 1 cut(s) | 3642 |
| EcoICRI | GAGCTC | 1 cut(s) | 2869 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 2212, 2237 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1669, 4027 |
| EcoRII | CCWGG | 9 cut(s) | 99, 214, 266, 1064, 1671, 2389, 2699, 3031, 3856 |
| EcoRV | GATATC | 1 cut(s) | 1678 |
| EcoT14I | CCWWGG | 4 cut(s) | 1252, 1901, 2489, 4091 |
| EcoT22I | ATGCAT | 2 cut(s) | 2154, 2654 |
| EcoT38I | GRGCYC | 3 cut(s) | 1118, 2871, 3190 |
| ErhI | CCWWGG | 4 cut(s) | 1252, 1901, 2489, 4091 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 524, 556, 1404, 1436, 2249, 2281 |
| FaqI | GGGAC | 7 cut(s) | 1374, 1508, 2231, 2462, 2601, 2894, 4010 |
| FauNDI | CATATG | 1 cut(s) | 1270 |
| FbaI | TGATCA | 1 cut(s) | 1423 |
| FokI | GGATG | 9 cut(s) | 388, 646, 1517, 1918, 2255, 2716, 3168, 3724, 3802 |
| FriOI | GRGCYC | 3 cut(s) | 1118, 2871, 3190 |
| GlaI | GCGC | 4 cut(s) | 1742, 3279, 3281, 4053 |
| GsuI | CTGGAG | 4 cut(s) | 728, 1146, 1206, 3270 |
| HaeIII | GGCC | 6 cut(s) | 104, 271, 1264, 1581, 1671, 4029 |
| HapII | CCGG | 7 cut(s) | 278, 307, 869, 1928, 1936, 2454, 3643 |
| HgaI | GACGC | 2 cut(s) | 956, 4049 |
| HhaI | GCGC | 4 cut(s) | 1743, 3280, 3282, 4054 |
| Hin6I | GCGC | 4 cut(s) | 1741, 3278, 3280, 4052 |
| HinP1I | GCGC | 4 cut(s) | 1741, 3278, 3280, 4052 |
| HincII | GTYRAC | 4 cut(s) | 2275, 2517, 3357, 3925 |
| HindII | GTYRAC | 4 cut(s) | 2275, 2517, 3357, 3925 |
| HpaII | CCGG | 7 cut(s) | 278, 307, 869, 1928, 1936, 2454, 3643 |
| Hpy166II | GTNNAC | 7 cut(s) | 970, 2275, 2517, 2876, 2936, 3357, 3925 |
| Hpy8I | GTNNAC | 7 cut(s) | 970, 2275, 2517, 2876, 2936, 3357, 3925 |
| Hpy99I | CGWCG | 6 cut(s) | 35, 38, 41, 44, 86, 4159 |
| HpyCH4III | ACNGT | 7 cut(s) | 803, 1838, 2035, 2443, 3196, 3565, 3818 |
| HpyCH4IV | ACGT | 4 cut(s) | 84, 2460, 3999, 4157 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 74, 779, 860, 1357, 2194, 3625, 4049, 4102 |
| HpySE526I | ACGT | 4 cut(s) | 84, 2460, 3999, 4157 |
| HspAI | GCGC | 4 cut(s) | 1741, 3278, 3280, 4052 |
| Kpn2I | TCCGGA | 1 cut(s) | 2453 |
| Ksp22I | TGATCA | 1 cut(s) | 1423 |
| LmnI | GCTCC | 5 cut(s) | 553, 1208, 1387, 2777, 3931 |
| LweI | GCATC | 7 cut(s) | 668, 1495, 1699, 2175, 2437, 2828, 3976 |
| MaeII | ACGT | 4 cut(s) | 84, 2460, 3999, 4157 |
| MaeIII | GTNAC | 8 cut(s) | 401, 691, 1584, 1814, 2437, 2793, 3294, 3818 |
| MfeI | CAATTG | 4 cut(s) | 621, 1077, 1656, 1953 |
| MflI | RGATCY | 3 cut(s) | 2626, 3374, 3908 |
| MhlI | GDGCHC | 6 cut(s) | 1118, 1213, 1384, 2412, 2871, 3190 |
| MlyI | GAGTC | 5 cut(s) | 292, 1396, 2632, 2801, 2924 |
| MmeI | TCCRAC | 2 cut(s) | 2520, 3240 |
| Mph1103I | ATGCAT | 2 cut(s) | 2154, 2654 |
| MroI | TCCGGA | 1 cut(s) | 2453 |
| MroXI | GAANNNNTTC | 4 cut(s) | 793, 2310, 2733, 3803 |
| MslI | CAYNNNNRTG | 4 cut(s) | 613, 664, 2931, 3984 |
| MspA1I | CMGCKG | 1 cut(s) | 68 |
| MspCI | CTTAAG | 1 cut(s) | 2672 |
| MspI | CCGG | 7 cut(s) | 278, 307, 869, 1928, 1936, 2454, 3643 |
| MunI | CAATTG | 4 cut(s) | 621, 1077, 1656, 1953 |
| Mva1269I | GAATGC | 2 cut(s) | 2152, 2506 |
| MvaI | CCWGG | 9 cut(s) | 101, 216, 268, 1066, 1673, 2391, 2701, 3033, 3858 |
| MvnI | CGCG | 1 cut(s) | 3280 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 74, 779, 860, 1357, 2194, 3625, 4049, 4102 |
| NciI | CCSGG | 4 cut(s) | 308, 870, 3643, 3644 |
| NcoI | CCATGG | 1 cut(s) | 1252 |
| NdeI | CATATG | 1 cut(s) | 1270 |
| NlaIV | GGNNCC | 4 cut(s) | 521, 2617, 3693, 4113 |
| NmeAIII | GCCGAG | 1 cut(s) | 376 |
| NmuCI | GTSAC | 3 cut(s) | 401, 1584, 2793 |
| NsiI | ATGCAT | 2 cut(s) | 2154, 2654 |
| NspI | RCATGY | 4 cut(s) | 588, 735, 1861, 2652 |
| NspV | TTCGAA | 1 cut(s) | 3797 |
| PaeI | GCATGC | 1 cut(s) | 588 |
| PaqCI | CACCTGC | 1 cut(s) | 2998 |
| PauI | GCGCGC | 1 cut(s) | 3278 |
| PceI | AGGCCT | 2 cut(s) | 104, 271 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 36, 39 |
| PctI | GAATGC | 2 cut(s) | 2152, 2506 |
| PdmI | GAANNNNTTC | 4 cut(s) | 793, 2310, 2733, 3803 |
| PfeI | GAWTC | 8 cut(s) | 991, 1133, 1735, 2317, 2327, 2690, 3683, 3794 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 706 |
| PleI | GAGTC | 5 cut(s) | 291, 1395, 2632, 2800, 2923 |
| PpsI | GAGTC | 5 cut(s) | 291, 1395, 2632, 2800, 2923 |
| PshBI | ATTAAT | 1 cut(s) | 2051 |
| Psp124BI | GAGCTC | 1 cut(s) | 2871 |
| Psp6I | CCWGG | 9 cut(s) | 99, 214, 266, 1064, 1671, 2389, 2699, 3031, 3856 |
| PspGI | CCWGG | 9 cut(s) | 99, 214, 266, 1064, 1671, 2389, 2699, 3031, 3856 |
| PspN4I | GGNNCC | 4 cut(s) | 521, 2617, 3693, 4113 |
| PspPI | GGNCC | 5 cut(s) | 1669, 1933, 2615, 3392, 4027 |
| PstI | CTGCAG | 2 cut(s) | 3922, 3964 |
| PstNI | CAGNNNCTG | 2 cut(s) | 3485, 3959 |
| PsuI | RGATCY | 3 cut(s) | 2626, 3374, 3908 |
| PteI | GCGCGC | 1 cut(s) | 3278 |
| PvuII | CAGCTG | 1 cut(s) | 68 |
| RsaI | GTAC | 6 cut(s) | 380, 3160, 3403, 3574, 3772, 3841 |
| RsaNI | GTAC | 6 cut(s) | 379, 3159, 3402, 3573, 3771, 3840 |
| RseI | CAYNNNNRTG | 4 cut(s) | 613, 664, 2931, 3984 |
| SacI | GAGCTC | 1 cut(s) | 2871 |
| Sau96I | GGNCC | 5 cut(s) | 1669, 1933, 2615, 3392, 4027 |
| ScaI | AGTACT | 1 cut(s) | 3574 |
| SchI | GAGTC | 5 cut(s) | 292, 1396, 2632, 2801, 2924 |
| SduI | GDGCHC | 6 cut(s) | 1118, 1213, 1384, 2412, 2871, 3190 |
| SfaNI | GCATC | 7 cut(s) | 668, 1495, 1699, 2175, 2437, 2828, 3976 |
| SfcI | CTRYAG | 2 cut(s) | 3918, 3960 |
| SfuI | TTCGAA | 1 cut(s) | 3797 |
| SinI | GGWCC | 3 cut(s) | 1933, 2615, 3392 |
| SmaI | CCCGGG | 1 cut(s) | 3644 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 613, 664, 2931, 3984 |
| SmlI | CTYRAG | 2 cut(s) | 2237, 2672 |
| SmoI | CTYRAG | 2 cut(s) | 2237, 2672 |
| SphI | GCATGC | 1 cut(s) | 588 |
| SseBI | AGGCCT | 2 cut(s) | 104, 271 |
| SsiI | CCGC | 2 cut(s) | 489, 3588 |
| SspI | AATATT | 1 cut(s) | 2227 |
| SstI | GAGCTC | 1 cut(s) | 2871 |
| StuI | AGGCCT | 2 cut(s) | 104, 271 |
| StyI | CCWWGG | 4 cut(s) | 1252, 1901, 2489, 4091 |
| TaaI | ACNGT | 7 cut(s) | 803, 1838, 2035, 2443, 3196, 3565, 3818 |
| TaiI | ACGT | 4 cut(s) | 87, 2463, 4002, 4160 |
| TaqI | TCGA | 8 cut(s) | 30, 81, 240, 286, 556, 2636, 2680, 3797 |
| TatI | WGTACW | 4 cut(s) | 3158, 3572, 3770, 3839 |
| TauI | GCSGC | 1 cut(s) | 491 |
| TfiI | GAWTC | 8 cut(s) | 991, 1133, 1735, 2317, 2327, 2690, 3683, 3794 |
| TscAI | CASTG | 6 cut(s) | 808, 1492, 2284, 2626, 3705, 4050 |
| TseFI | GTSAC | 3 cut(s) | 401, 1584, 2793 |
| Tsp45I | GTSAC | 3 cut(s) | 401, 1584, 2793 |
| TspGWI | ACGGA | 2 cut(s) | 1556, 3389 |
| TspMI | CCCGGG | 1 cut(s) | 3642 |
| TspRI | CASTG | 6 cut(s) | 808, 1492, 2284, 2626, 3705, 4050 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 706 |
| Vha464I | CTTAAG | 1 cut(s) | 2672 |
| VpaK11BI | GGWCC | 3 cut(s) | 1933, 2615, 3392 |
| VspI | ATTAAT | 1 cut(s) | 2051 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 2212, 2237 |
| XapI | RAATTY | 9 cut(s) | 178, 846, 1145, 1474, 1616, 2557, 2733, 2761, 3108 |
| XbaI | TCTAGA | 2 cut(s) | 2962, 3383 |
| XceI | RCATGY | 4 cut(s) | 588, 735, 1861, 2652 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1181, 3002 |
| XmaI | CCCGGG | 1 cut(s) | 3642 |
| XmnI | GAANNNNTTC | 4 cut(s) | 793, 2310, 2733, 3803 |
| ZrmI | AGTACT | 1 cut(s) | 3574 |
| Zsp2I | ATGCAT | 2 cut(s) | 2154, 2654 |