DEAD DEAH box RNA helicase family protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G35530 AT1G35530 AT1G35530 AT1G35530 AT1G35530 AT1G36020 |
| fragaria_vesca | FvH4_7g03750 |
| malus_domestica | MD15G1404400.v1.1 |
| prunus_persica | Prupe.1G551100_v2.0.a1 Prupe.2G019600_v2.0.a1 Prupe.2G019700_v2.0.a1 |
| pyrus_communis | pycom15g36170 pycom15g36180 |
| rosa_chinensis | RchiOBHm_Chr7g0228871 RchiOBHm_Chr7g0228881 RchiOBHm_Chr7g0228951 |
| rosa_laevigata | RLG00000001539 RLG00000002150 RLG00000022432 |
| rosa_multiflora | Rmu_sc0000721.1_g000006 Rmu_sc0004517.1_g000001 Rmu_sc0005913.1_g000001 Rmu_sc0005913.1_g000026 Rmu_sc0011218.1_g000006 Rmu_sc0013945.1_g000010 |
| rosa_roxburghii | Rroxscaffold_3G00230830 Rroxscaffold_3G00238230 |
| rosa_rugosa | Rorug07G0252600 Rorug07G0254200 |
| rosa_samantha | Rh7AG405800 Rh7BG333000 Rh7BG385100 Rh7BG385200 Rh7BG385300 Rh7CG423400 Rh7DG341000 Rh7DG399800 Rh7DG399900 |
| rosa_wichuraiana | Rw7G033620 Rw7G033650 Rw7G033670 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 76 |
| Acc16I | TGCGCA | 1 cut(s) | 350 |
| Acc36I | ACCTGC | 1 cut(s) | 76 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 230 |
| AccI | GTMKAC | 1 cut(s) | 882 |
| AciI | CCGC | 4 cut(s) | 216, 623, 722, 1151 |
| AclWI | GGATC | 1 cut(s) | 369 |
| AcsI | RAATTY | 3 cut(s) | 159, 289, 481 |
| AcuI | CTGAAG | 1 cut(s) | 516 |
| AfaI | GTAC | 5 cut(s) | 106, 211, 726, 826, 895 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 230, 702, 877, 896 |
| AgeI | ACCGGT | 1 cut(s) | 896 |
| AgsI | TTSAA | 4 cut(s) | 582, 852, 932, 966 |
| AjnI | CCWGG | 1 cut(s) | 839 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 280, 312, 980, 1012 |
| AluBI | AGCT | 7 cut(s) | 239, 254, 521, 539, 620, 954, 1112 |
| AluI | AGCT | 7 cut(s) | 239, 254, 521, 539, 620, 954, 1112 |
| Alw26I | GTCTC | 3 cut(s) | 139, 297, 1020 |
| AlwI | GGATC | 1 cut(s) | 369 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 53, 539, 1016, 1165 |
| Ama87I | CYCGRG | 1 cut(s) | 1004 |
| AoxI | GGCC | 2 cut(s) | 501, 1148 |
| ApeKI | GCWGC | 6 cut(s) | 620, 706, 746, 1016, 1033, 1159 |
| ApoI | RAATTY | 3 cut(s) | 159, 289, 481 |
| AsiGI | ACCGGT | 1 cut(s) | 896 |
| AspLEI | GCGC | 4 cut(s) | 351, 1038, 1108, 1144 |
| AspS9I | GGNCC | 1 cut(s) | 501 |
| AsuC2I | CCSGG | 1 cut(s) | 872 |
| AsuHPI | GGTGA | 5 cut(s) | 57, 213, 676, 684, 723 |
| AsuII | TTCGAA | 2 cut(s) | 163, 458 |
| AvaI | CYCGRG | 1 cut(s) | 1004 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 226, 258 |
| BbvCI | CCTCAGC | 1 cut(s) | 522 |
| BbvI | GCAGC | 6 cut(s) | 607, 718, 758, 1003, 1045, 1171 |
| BccI | CCATC | 3 cut(s) | 652, 815, 838 |
| BceAI | ACGGC | 1 cut(s) | 921 |
| BciT130I | CCWGG | 1 cut(s) | 841 |
| BciVI | GTATCC | 1 cut(s) | 145 |
| BclI | TGATCA | 1 cut(s) | 565 |
| BcnI | CCSGG | 1 cut(s) | 872 |
| BcoDI | GTCTC | 3 cut(s) | 139, 297, 1020 |
| BfaI | CTAG | 1 cut(s) | 426 |
| BfmI | CTRYAG | 3 cut(s) | 615, 975, 1017 |
| BfoI | RGCGCY | 1 cut(s) | 1145 |
| BfuAI | ACCTGC | 1 cut(s) | 76 |
| BfuI | GTATCC | 1 cut(s) | 145 |
| BisI | GCNGC | 8 cut(s) | 621, 624, 707, 747, 1017, 1034, 1151, 1160 |
| BlsI | GCNGC | 8 cut(s) | 622, 625, 708, 748, 1018, 1035, 1152, 1161 |
| Bme1390I | CCNGG | 2 cut(s) | 841, 872 |
| BmeT110I | CYCGRG | 1 cut(s) | 1004 |
| BmgT120I | GGNCC | 1 cut(s) | 501 |
| BmiI | GGNNCC | 1 cut(s) | 1170 |
| BmrFI | CCNGG | 2 cut(s) | 841, 872 |
| BmrI | ACTGGG | 1 cut(s) | 67 |
| BmsI | GCATC | 4 cut(s) | 4, 227, 1033, 1171 |
| BmuI | ACTGGG | 1 cut(s) | 67 |
| BpmI | CTGGAG | 1 cut(s) | 321 |
| Bpu10I | CCTNAGC | 1 cut(s) | 522 |
| Bpu14I | TTCGAA | 2 cut(s) | 163, 458 |
| BpuMI | CCSGG | 1 cut(s) | 872 |
| BsaJI | CCNNGG | 3 cut(s) | 696, 858, 1145 |
| BsaWI | WCCGGW | 1 cut(s) | 896 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 117, 147, 980, 1010 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 230, 702, 877, 896 |
| Bse118I | RCCGGY | 1 cut(s) | 896 |
| Bse1I | ACTGG | 5 cut(s) | 73, 195, 448, 710, 775 |
| Bse3DI | GCAATG | 3 cut(s) | 677, 1104, 1115 |
| BseBI | CCWGG | 1 cut(s) | 841 |
| BseDI | CCNNGG | 3 cut(s) | 696, 858, 1145 |
| BseGI | GGATG | 2 cut(s) | 79, 849 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 230, 702, 877, 896 |
| BseMI | GCAATG | 3 cut(s) | 677, 1104, 1115 |
| BseMII | CTCAG | 2 cut(s) | 513, 644 |
| BseNI | ACTGG | 5 cut(s) | 73, 195, 448, 710, 775 |
| BseRI | GAGGAG | 1 cut(s) | 527 |
| BseXI | GCAGC | 6 cut(s) | 607, 718, 758, 1003, 1045, 1171 |
| BshFI | GGCC | 2 cut(s) | 503, 1150 |
| BshTI | ACCGGT | 1 cut(s) | 896 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1004 |
| BsiSI | CCGG | 2 cut(s) | 871, 897 |
| BslFI | GGGAC | 1 cut(s) | 41 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 230, 702, 877, 896 |
| BsmAI | GTCTC | 3 cut(s) | 139, 297, 1020 |
| BsmFI | GGGAC | 1 cut(s) | 41 |
| BsnI | GGCC | 2 cut(s) | 503, 1150 |
| BsoBI | CYCGRG | 1 cut(s) | 1004 |
| Bsp119I | TTCGAA | 2 cut(s) | 163, 458 |
| Bsp143I | GATC | 6 cut(s) | 361, 428, 565, 1066, 1087, 1195 |
| Bsp19I | CCATGG | 1 cut(s) | 696 |
| BspACI | CCGC | 4 cut(s) | 216, 623, 722, 1151 |
| BspANI | GGCC | 2 cut(s) | 503, 1150 |
| BspCNI | CTCAG | 2 cut(s) | 514, 643 |
| BspLI | GGNNCC | 1 cut(s) | 1170 |
| BspMAI | CTGCAG | 2 cut(s) | 979, 1021 |
| BspMI | ACCTGC | 1 cut(s) | 76 |
| BspPI | GGATC | 1 cut(s) | 369 |
| BspQI | GCTCTTC | 1 cut(s) | 229 |
| BspT104I | TTCGAA | 2 cut(s) | 163, 458 |
| BsrDI | GCAATG | 3 cut(s) | 677, 1104, 1115 |
| BsrFI | RCCGGY | 1 cut(s) | 896 |
| BsrI | ACTGG | 5 cut(s) | 73, 195, 448, 710, 775 |
| BssAI | RCCGGY | 1 cut(s) | 896 |
| BssECI | CCNNGG | 3 cut(s) | 696, 858, 1145 |
| BssMI | GATC | 6 cut(s) | 361, 428, 565, 1066, 1087, 1195 |
| BssT1I | CCWWGG | 3 cut(s) | 696, 858, 1145 |
| Bst2UI | CCWGG | 1 cut(s) | 841 |
| Bst4CI | ACNGT | 1 cut(s) | 247 |
| Bst6I | CTCTTC | 1 cut(s) | 229 |
| BstBI | TTCGAA | 2 cut(s) | 163, 458 |
| BstC8I | GCNNGC | 3 cut(s) | 331, 1021, 1110 |
| BstDEI | CTNAG | 2 cut(s) | 522, 630 |
| BstDSI | CCRYGG | 1 cut(s) | 696 |
| BstF5I | GGATG | 2 cut(s) | 79, 849 |
| BstH2I | RGCGCY | 1 cut(s) | 1145 |
| BstHHI | GCGC | 4 cut(s) | 351, 1038, 1108, 1144 |
| BstKTI | GATC | 6 cut(s) | 364, 431, 568, 1069, 1090, 1198 |
| BstMAI | GTCTC | 3 cut(s) | 139, 297, 1020 |
| BstMBI | GATC | 6 cut(s) | 361, 428, 565, 1066, 1087, 1195 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 679, 1103, 1150, 1156, 1159 |
| BstNI | CCWGG | 1 cut(s) | 841 |
| BstNSI | RCATGY | 1 cut(s) | 1060 |
| BstSCI | CCNGG | 2 cut(s) | 839, 870 |
| BstSFI | CTRYAG | 3 cut(s) | 615, 975, 1017 |
| BstV1I | GCAGC | 6 cut(s) | 607, 718, 758, 1003, 1045, 1171 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 821 |
| BsuI | GTATCC | 1 cut(s) | 145 |
| BsuRI | GGCC | 2 cut(s) | 503, 1150 |
| BtgI | CCRYGG | 1 cut(s) | 696 |
| BtsCI | GGATG | 2 cut(s) | 79, 849 |
| BveI | ACCTGC | 1 cut(s) | 76 |
| Cac8I | GCNNGC | 3 cut(s) | 331, 1021, 1110 |
| CaiI | CAGNNNCTG | 4 cut(s) | 53, 539, 1016, 1165 |
| CfoI | GCGC | 4 cut(s) | 351, 1038, 1108, 1144 |
| Cfr10I | RCCGGY | 1 cut(s) | 896 |
| Cfr13I | GGNCC | 1 cut(s) | 501 |
| CseI | GACGC | 1 cut(s) | 1103 |
| Csp6I | GTAC | 5 cut(s) | 105, 210, 725, 825, 894 |
| CspAI | ACCGGT | 1 cut(s) | 896 |
| CspCI | CAANNNNNGTGG | 6 cut(s) | 103, 138, 256, 291, 384, 419 |
| CviAII | CATG | 2 cut(s) | 697, 1057 |
| CviQI | GTAC | 5 cut(s) | 105, 210, 725, 825, 894 |
| DdeI | CTNAG | 2 cut(s) | 522, 630 |
| DpnI | GATC | 6 cut(s) | 363, 430, 567, 1068, 1089, 1197 |
| DpnII | GATC | 6 cut(s) | 361, 428, 565, 1066, 1087, 1195 |
| Eam1104I | CTCTTC | 1 cut(s) | 229 |
| EarI | CTCTTC | 1 cut(s) | 229 |
| Eco130I | CCWWGG | 3 cut(s) | 696, 858, 1145 |
| Eco32I | GATATC | 1 cut(s) | 971 |
| Eco57I | CTGAAG | 1 cut(s) | 516 |
| Eco88I | CYCGRG | 1 cut(s) | 1004 |
| EcoO109I | RGGNCCY | 1 cut(s) | 501 |
| EcoRII | CCWGG | 1 cut(s) | 839 |
| EcoRV | GATATC | 1 cut(s) | 971 |
| EcoT14I | CCWWGG | 3 cut(s) | 696, 858, 1145 |
| ErhI | CCWWGG | 3 cut(s) | 696, 858, 1145 |
| FaeI | CATG | 2 cut(s) | 700, 1060 |
| FaqI | GGGAC | 1 cut(s) | 41 |
| FatI | CATG | 2 cut(s) | 696, 1056 |
| FauNDI | CATATG | 1 cut(s) | 10 |
| FbaI | TGATCA | 1 cut(s) | 565 |
| FblI | GTMKAC | 1 cut(s) | 882 |
| Fnu4HI | GCNGC | 8 cut(s) | 621, 624, 707, 747, 1017, 1034, 1151, 1160 |
| FokI | GGATG | 2 cut(s) | 66, 856 |
| Fsp4HI | GCNGC | 8 cut(s) | 621, 624, 707, 747, 1017, 1034, 1151, 1160 |
| FspBI | CTAG | 1 cut(s) | 426 |
| FspI | TGCGCA | 1 cut(s) | 350 |
| GlaI | GCGC | 4 cut(s) | 350, 1037, 1107, 1143 |
| GluI | GCNGC | 8 cut(s) | 621, 624, 707, 747, 1017, 1034, 1151, 1160 |
| GsuI | CTGGAG | 1 cut(s) | 321 |
| HaeII | RGCGCY | 1 cut(s) | 1145 |
| HaeIII | GGCC | 2 cut(s) | 503, 1150 |
| HapII | CCGG | 2 cut(s) | 871, 897 |
| HgaI | GACGC | 1 cut(s) | 1103 |
| HhaI | GCGC | 4 cut(s) | 351, 1038, 1108, 1144 |
| Hin1II | CATG | 2 cut(s) | 700, 1060 |
| Hin6I | GCGC | 4 cut(s) | 349, 1036, 1106, 1142 |
| HinP1I | GCGC | 4 cut(s) | 349, 1036, 1106, 1142 |
| HincII | GTYRAC | 3 cut(s) | 411, 837, 982 |
| HindII | GTYRAC | 3 cut(s) | 411, 837, 982 |
| HinfI | GANTC | 4 cut(s) | 379, 737, 848, 1007 |
| HpaII | CCGG | 2 cut(s) | 871, 897 |
| HphI | GGTGA | 5 cut(s) | 57, 213, 676, 684, 723 |
| Hpy166II | GTNNAC | 5 cut(s) | 411, 449, 837, 883, 982 |
| Hpy188I | TCNGA | 4 cut(s) | 313, 535, 550, 1012 |
| Hpy188III | TCNNGA | 6 cut(s) | 300, 383, 569, 966, 1085, 1091 |
| Hpy8I | GTNNAC | 5 cut(s) | 411, 449, 837, 883, 982 |
| HpyAV | CCTTC | 2 cut(s) | 336, 514 |
| HpyCH4III | ACNGT | 1 cut(s) | 247 |
| HpyCH4V | TGCA | 8 cut(s) | 17, 47, 86, 638, 977, 1019, 1033, 1046 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 679, 1103, 1150, 1156, 1159 |
| HpyF3I | CTNAG | 2 cut(s) | 522, 630 |
| Hsp92II | CATG | 2 cut(s) | 700, 1060 |
| HspAI | GCGC | 4 cut(s) | 349, 1036, 1106, 1142 |
| Ksp22I | TGATCA | 1 cut(s) | 565 |
| Kzo9I | GATC | 6 cut(s) | 361, 428, 565, 1066, 1087, 1195 |
| LguI | GCTCTTC | 1 cut(s) | 229 |
| LmnI | GCTCC | 2 cut(s) | 988, 1156 |
| Lsp1109I | GCAGC | 6 cut(s) | 607, 718, 758, 1003, 1045, 1171 |
| LweI | GCATC | 4 cut(s) | 4, 227, 1033, 1171 |
| MaeI | CTAG | 1 cut(s) | 426 |
| MaeIII | GTNAC | 2 cut(s) | 75, 391 |
| MalI | GATC | 6 cut(s) | 363, 430, 567, 1068, 1089, 1197 |
| MboI | GATC | 6 cut(s) | 361, 428, 565, 1066, 1087, 1195 |
| MboII | GAAGA | 4 cut(s) | 135, 246, 522, 572 |
| MluCI | AATT | 5 cut(s) | 159, 225, 289, 481, 947 |
| MlyI | GAGTC | 1 cut(s) | 1016 |
| MmeI | TCCRAC | 2 cut(s) | 291, 347 |
| MseI | TTAA | 3 cut(s) | 293, 321, 1125 |
| MslI | CAYNNNNRTG | 1 cut(s) | 189 |
| MspA1I | CMGCKG | 1 cut(s) | 620 |
| MspI | CCGG | 2 cut(s) | 871, 897 |
| MspR9I | CCNGG | 2 cut(s) | 841, 872 |
| MvaI | CCWGG | 1 cut(s) | 841 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 679, 1103, 1150, 1156, 1159 |
| NciI | CCSGG | 1 cut(s) | 872 |
| NcoI | CCATGG | 1 cut(s) | 696 |
| NdeI | CATATG | 1 cut(s) | 10 |
| NdeII | GATC | 6 cut(s) | 361, 428, 565, 1066, 1087, 1195 |
| NlaIII | CATG | 2 cut(s) | 700, 1060 |
| NlaIV | GGNNCC | 1 cut(s) | 1170 |
| NmuCI | GTSAC | 1 cut(s) | 391 |
| NsbI | TGCGCA | 1 cut(s) | 350 |
| NspI | RCATGY | 1 cut(s) | 1060 |
| NspV | TTCGAA | 2 cut(s) | 163, 458 |
| PaeR7I | CTCGAG | 1 cut(s) | 1004 |
| PaqCI | CACCTGC | 1 cut(s) | 76 |
| PciSI | GCTCTTC | 1 cut(s) | 229 |
| PfeI | GAWTC | 3 cut(s) | 379, 737, 848 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 230 |
| PinAI | ACCGGT | 1 cut(s) | 896 |
| PkrI | GCNGC | 8 cut(s) | 622, 625, 708, 748, 1018, 1035, 1152, 1161 |
| PleI | GAGTC | 1 cut(s) | 1015 |
| PpsI | GAGTC | 1 cut(s) | 1015 |
| Psp6I | CCWGG | 1 cut(s) | 839 |
| PspGI | CCWGG | 1 cut(s) | 839 |
| PspN4I | GGNNCC | 1 cut(s) | 1170 |
| PspPI | GGNCC | 1 cut(s) | 501 |
| PspXI | VCTCGAGB | 1 cut(s) | 1004 |
| PstI | CTGCAG | 2 cut(s) | 979, 1021 |
| PstNI | CAGNNNCTG | 4 cut(s) | 53, 539, 1016, 1165 |
| PvuII | CAGCTG | 1 cut(s) | 620 |
| RsaI | GTAC | 5 cut(s) | 106, 211, 726, 826, 895 |
| RsaNI | GTAC | 5 cut(s) | 105, 210, 725, 825, 894 |
| RseI | CAYNNNNRTG | 1 cut(s) | 189 |
| SapI | GCTCTTC | 1 cut(s) | 229 |
| SaqAI | TTAA | 3 cut(s) | 293, 321, 1125 |
| SatI | GCNGC | 8 cut(s) | 621, 624, 707, 747, 1017, 1034, 1151, 1160 |
| Sau3AI | GATC | 6 cut(s) | 361, 428, 565, 1066, 1087, 1195 |
| Sau96I | GGNCC | 1 cut(s) | 501 |
| SchI | GAGTC | 1 cut(s) | 1016 |
| ScrFI | CCNGG | 2 cut(s) | 841, 872 |
| SfaNI | GCATC | 4 cut(s) | 4, 227, 1033, 1171 |
| SfcI | CTRYAG | 3 cut(s) | 615, 975, 1017 |
| Sfr274I | CTCGAG | 1 cut(s) | 1004 |
| SfuI | TTCGAA | 2 cut(s) | 163, 458 |
| SlaI | CTCGAG | 1 cut(s) | 1004 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 189 |
| SmlI | CTYRAG | 1 cut(s) | 1004 |
| SmoI | CTYRAG | 1 cut(s) | 1004 |
| Sse9I | AATT | 5 cut(s) | 159, 225, 289, 481, 947 |
| SsiI | CCGC | 4 cut(s) | 216, 623, 722, 1151 |
| SspMI | CTAG | 1 cut(s) | 426 |
| StyD4I | CCNGG | 2 cut(s) | 839, 870 |
| StyI | CCWWGG | 3 cut(s) | 696, 858, 1145 |
| TaaI | ACNGT | 1 cut(s) | 247 |
| TaqI | TCGA | 7 cut(s) | 163, 382, 458, 510, 1005, 1077, 1182 |
| TasI | AATT | 5 cut(s) | 159, 225, 289, 481, 947 |
| TauI | GCSGC | 2 cut(s) | 626, 1153 |
| TfiI | GAWTC | 3 cut(s) | 379, 737, 848 |
| Tru1I | TTAA | 3 cut(s) | 293, 321, 1125 |
| Tru9I | TTAA | 3 cut(s) | 293, 321, 1125 |
| TseFI | GTSAC | 1 cut(s) | 391 |
| TseI | GCWGC | 6 cut(s) | 620, 706, 746, 1016, 1033, 1159 |
| Tsp45I | GTSAC | 1 cut(s) | 391 |
| TspDTI | ATGAA | 4 cut(s) | 496, 583, 666, 881 |
| TspGWI | ACGGA | 1 cut(s) | 122 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 230 |
| XapI | RAATTY | 3 cut(s) | 159, 289, 481 |
| XceI | RCATGY | 1 cut(s) | 1060 |
| XhoI | CTCGAG | 1 cut(s) | 1004 |
| XmiI | GTMKAC | 1 cut(s) | 882 |
| XspI | CTAG | 1 cut(s) | 426 |