Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0011218.1

Orthogroup ID

OG0002489

Physical Location & Seq

Genomic Coordinates Reverse (-)

23741 .. 34058

Gene Structure 10318 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0011218.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3771 bp

atgacctccaccgatcctcaccacatagtcgacgacgacgaagacgacgatttcgattgggaagcagctgccagagccgtcgacgtcgtcacccagaccaccccaaagcccacatcttcccattttgcccctcctcccccaattcagaaaccaccgtttcctccaaccttcaacaacaagcccagtacttcacggcagaccactctcgataggttccttgggaagcccgccccaaagcctcagcccgaaattcgagactgcggcgatgagagagtgtcccgtgttcaaattgatgccgaaaaagccaacacttggatgtacccaggttcaaattcactttctctgcctagttttgtttcatcaatatgcgaaattaattttcctgggcgtgactatcaatttgctatcaccaagacagcacttttttcgaatacgctggtggcattgccaaccggactcgggaagacgcttatcgctgcagttgttatgtataactacttcagatggttccctgatgtcgaatatttggtatgcttggtgattgatgaagctcaccgagcattagggaactatgcttctagtgttgcagttcgtgagttaatggcggcacaagtgccactgagaattttagctttgaccgcaacaccaggatctaagcagcagactgttcagcaaattattgataatttgtgtatatcatcacttgaataccgtgaagaaaatgatgctgatgtcagcccttatgttcacaacagggaggtagagttgattaaggtggcaatgggtcaagatgctgtggacataagtaataagatatatgatgcaatacgaccatatttaaccaggctttgtgcggctggagttctcccaaatagagacgctcaaacgtggagcccaggcgagttacttaggtttagggagaaatttcgtcttgcacctcctccagacttcccccaatttaaatatggagaaattgaaggttggtatggagttcttcttacaggttaccacattcttaagctattatcaagccatggaataagaccagcatatgacatgcttgaagaaaagttaaaaagggggttttttgccaagtatatgagtagaagtgaagatgttcataaagcaaagctaaggatgcagcaaagtctgtctcatggtggtccgagtcccaagttatccaaaatgttagaagtattgcttgatcatttcaaaacaaaagatccacaaaactcgagggttatgattttctcaaacttcaggggaagtgtcagggagataatggatgcattggcaaacattgggaatttagttaaagctaccgagtttattggtcagagttcagttttagcctgtgaaggatcagagttgaaaggttacaagcggaagctaacaaacagcaagaatgtgagcaaacacatgcgaaatgggggaataaatagcttcaattttcattctagcccgaggatgatccctcacattttcaaacctgaagtccaatatgttgagttttcaattgaacaattcattcgtcctggaaagaaagtcaaagatgataatgatattcagacacctgttactatagacaaattaactgttgctgagactggtttagttgccaagtatttccagtcacatgacataacatggaaaccatctcttatcgcctttcctcacttccaaacctatccctcaagagtgtataaagtaatgcactcgcctcgaacaacaatgctaattgatacaatgcaatctttgcaaggattatccttttccagtgacagaaaaatttccctcatcgaggatgaggtctgttcagaggattgcttaacagttgacactgtcgagcagtgtgacaacagcgaagatttgctgaatcttgatggttcaaagaaacaatcacaggaaataggactggatttcgaactacaaactactgggacattggaaaccaaggagaagcatagcgaccatgatttatctgatgaaaatccttctggtcactcttttctctttggttcagatgttgttgatgttgatgcttctggaaaggtccgtatcatatctgtccctattcttcatggcaaaagtataccaaataccaagtttgcaagtgcaagcagtggtaagttggatcgtttgaagcaaagttcttgccatgtaagaacatcagatgaagaacaaacagaagtaactactcgagctggagctaatggggatccagaaatggctcagatagcatatataaggaatgatacaccaacttggtctagattgtgtgactctgaaacctggatggagacaacaatcaatgcggatgaagagaatcctcaaaagccaattctcaaaggaaactttccaaatggagatagtgcttgtgagacgcctgatgttctgaaaagcaaggcaccgacattgctggctgatgaagacgacaaccttttcagagatggtgagcttagtccaaggcttactaatttgatcaaaagtggagttgttccagagtcacctatcaataatagtggaatattagataccataaataagtatgtagttcctgatgctgtttcgcctgcccaattacctacggaactgatatcgaagtcttcaagtcctgggaaaaatggaaaagccactgatatggataccagtgcatgtgaaacaaatgtgtcccgttttcctattgatattgaaattcaatctcccttgcacaataggagtactgccagtataaatgaatctacctccacatcaccggttattgacagaggccaaactgttttagcagaccttacaaacagtagctgtagcaaagattggtgtataggttctggagacaagtcgcagagtgtgaaacagacacgcaagttgaagaggttgcgcaaagttggggatcattggaaaagtaggaatcaggaaagcatgacaaccaatgatgtcccaagagcaaacctgaccagatcttttataagtactactcttcctactaagcatcttagaggtaccaaaatacgtgcaaagaagtcggttaatgatgtgagggaattcatcgacgaggaagctgaggtatcttcagaggatatatctgatgatgaagaagatgaaccagacaactattcaaatgatagtttcatagatgacaggataaattctacggctgcaagtactcaggctgcaaccagtggaattgacatgatggcagtgtacaggcgttcattgctcacccaatcacccatggagaagcagccaagcagttcagccacattttctcccaattctgtggcaacgataactaggacaccggaaactggaagttctggtggaaaaacatctttctctcttcagactcctcaaagcgactctacaaatctgccaattggaatagattcaaagtctttccataagaattggaactctgaagccagaacttttacaactgttgtttctccaggatatgaaagagatattgaaagtcgaaaaagaaaatcgagttttcatcattcaagatctgttcctgctgtcaacttggagctagaattctcgttgcaatcagaggctgcaggcagaaatatgcagcacagtgatgcacatggggacatgctttatgatgatcagttttatgagggtcttgatcttgacgcattggaagcacaagctacaattcttcttaagcagaaatcagaattgccactgcagaagccacagatgagtcagttaaacccagaaaatcctactcttgacagtgctccatcatttgatcttgggatatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000280 GO:0000712 GO:0003674 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006281 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007127 GO:0007131 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0016043 GO:0022402 GO:0022414 GO:0031297 GO:0031974 GO:0031981 GO:0032991 GO:0033554 GO:0034641 GO:0034645 GO:0035825 GO:0036297 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043240 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045005 GO:0045132 GO:0046483 GO:0048285 GO:0050896 GO:0051304 GO:0051307 GO:0051321 GO:0051716 GO:0061982 GO:0070013 GO:0071704 GO:0071821 GO:0071840 GO:0090304 GO:0098813 GO:0140013 GO:1901360 GO:1901576 GO:1903046

KEGG Pathways

Metabolic & Signaling

ko03460 map03460

Pfam Domains

Protein Families

Helicase_C ResIII

Protein Analysis

1256

Amino Acids

139.56

Weight (kDa)

5.48

Isoelectric Point (pI)

48.74

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002489)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G35530 AT1G35530 AT1G35530 AT1G35530 AT1G35530 AT1G36020
fragaria_vesca	FvH4_7g03750
malus_domestica	MD15G1404400.v1.1
prunus_persica	Prupe.1G551100_v2.0.a1 Prupe.2G019600_v2.0.a1 Prupe.2G019700_v2.0.a1
pyrus_communis	pycom15g36170 pycom15g36180
rosa_chinensis	RchiOBHm_Chr7g0228871 RchiOBHm_Chr7g0228881 RchiOBHm_Chr7g0228951
rosa_laevigata	RLG00000001539 RLG00000002150 RLG00000022432
rosa_multiflora	Rmu_sc0000721.1_g000006 Rmu_sc0004517.1_g000001 Rmu_sc0005913.1_g000001 Rmu_sc0005913.1_g000026 Rmu_sc0011218.1_g000006 Rmu_sc0013945.1_g000010
rosa_roxburghii	Rroxscaffold_3G00230830 Rroxscaffold_3G00238230
rosa_rugosa	Rorug07G0252600 Rorug07G0254200
rosa_samantha	Rh7AG405800 Rh7BG333000 Rh7BG385100 Rh7BG385200 Rh7BG385300 Rh7CG423400 Rh7DG341000 Rh7DG399800 Rh7DG399900
rosa_wichuraiana	Rw7G033620 Rw7G033650 Rw7G033670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2969
AatII	GACGTC	1 cut(s)	87
Acc16I	TGCGCA	1 cut(s)	2882
Acc65I	GGTACC	1 cut(s)	3002
AccB1I	GGYRCC	2 cut(s)	2407, 3002
AccB7I	CCANNNNNTGG	1 cut(s)	312
AccI	GTMKAC	3 cut(s)	30, 81, 2092
AciI	CCGC	7 cut(s)	228, 261, 605, 639, 854, 1384, 2315
AclWI	GGATC	9 cut(s)	8, 658, 1217, 1369, 1465, 2142, 2213, 2226, 2901
AcuI	CTGAAG	6 cut(s)	484, 1243, 1512, 3057, 3326, 3438
AcyI	GRCGYC	2 cut(s)	84, 2384
AfaI	GTAC	7 cut(s)	187, 320, 2722, 2974, 3004, 3166, 3206
AfiI	CCNNNNNNNGG	4 cut(s)	312, 459, 1801, 3308
AflII	CTTAAG	2 cut(s)	1016, 3668
AgeI	ACCGGT	1 cut(s)	2755
AjnI	CCWGG	9 cut(s)	322, 382, 646, 842, 895, 1534, 2291, 2614, 3448
Alw21I	GWGCWC	1 cut(s)	3748
Alw26I	GTCTC	7 cut(s)	249, 870, 1158, 1598, 2294, 2375, 2829
AlwI	GGATC	9 cut(s)	8, 658, 1217, 1369, 1465, 2142, 2213, 2226, 2901
AlwNI	CAGNNNCTG	2 cut(s)	2805, 3557
Ama87I	CYCGRG	4 cut(s)	458, 1234, 1462, 2199
AoxI	GGCC	1 cut(s)	2770
ArsI	GACNNNNNNTTYG	6 cut(s)	35, 67, 383, 415, 1479, 1511
AseI	ATTAAT	1 cut(s)	375
AsiGI	ACCGGT	1 cut(s)	2755
Asp700I	GAANNNNTTC	3 cut(s)	1116, 1789, 3385
Asp718I	GGTACC	1 cut(s)	3002
AspLEI	GCGC	1 cut(s)	2883
AspS9I	GGNCC	2 cut(s)	1163, 2053
AsuII	TTCGAA	2 cut(s)	428, 1923
AvaI	CYCGRG	4 cut(s)	458, 1234, 1462, 2199
AvaII	GGWCC	2 cut(s)	1163, 2053
BamHI	GGATCC	1 cut(s)	2218
BanI	GGYRCC	2 cut(s)	2407, 3002
BanII	GRGCYC	1 cut(s)	896
BarI	GAAGNNNNNNTAC	2 cut(s)	482, 514
BbsI	GAAGAC	4 cut(s)	48, 470, 2436, 2598
Bbv12I	GWGCWC	1 cut(s)	3748
BbvCI	CCTCAGC	2 cut(s)	240, 3063
BccI	CCATC	7 cut(s)	498, 1663, 1877, 2290, 2444, 3190, 3757
BceAI	ACGGC	3 cut(s)	62, 209, 3171
BcgI	CGANNNNNNTGC	6 cut(s)	408, 442, 1703, 1737, 3006, 3040
BciT130I	CCWGG	9 cut(s)	324, 384, 648, 844, 897, 1536, 2293, 2616, 3450
BciVI	GTATCC	1 cut(s)	2638
BclI	TGATCA	3 cut(s)	1204, 2481, 3610
BcoDI	GTCTC	7 cut(s)	249, 870, 1158, 1598, 2294, 2375, 2829
BfaI	CTAG	6 cut(s)	348, 579, 1458, 2271, 3294, 3533
BfmI	CTRYAG	5 cut(s)	477, 1581, 2806, 3558, 3692
BfrI	CTTAAG	2 cut(s)	1016, 3668
BfuI	GTATCC	1 cut(s)	2638
BglII	AGATCT	2 cut(s)	2960, 3506
BmcAI	AGTACT	4 cut(s)	187, 2722, 2974, 3166
Bme1390I	CCNGG	9 cut(s)	324, 384, 648, 844, 897, 1536, 2293, 2616, 3450
Bme18I	GGWCC	2 cut(s)	1163, 2053
BmeT110I	CYCGRG	4 cut(s)	458, 1234, 1462, 2199
BmgT120I	GGNCC	2 cut(s)	1163, 2053
BmiI	GGNNCC	6 cut(s)	215, 509, 893, 2220, 2409, 3004
BmrFI	CCNGG	9 cut(s)	324, 384, 648, 844, 897, 1536, 2293, 2616, 3450
BmrI	ACTGGG	2 cut(s)	177, 1947
BmuI	ACTGGG	2 cut(s)	177, 1947
BpiI	GAAGAC	4 cut(s)	48, 470, 2436, 2598
BpmI	CTGGAG	5 cut(s)	879, 927, 2226, 2853, 3432
Bpu10I	CCTNAGC	3 cut(s)	240, 1133, 3063
Bpu14I	TTCGAA	2 cut(s)	428, 1923
BpuEI	CTTGAG	1 cut(s)	1678
BsaAI	YACGTR	1 cut(s)	3014
BsaBI	GATNNNNATC	1 cut(s)	1989
BsaHI	GRCGYC	2 cut(s)	84, 2384
BsaWI	WCCGGW	3 cut(s)	452, 2755, 3301
BsaXI	ACNNNNNCTCC	4 cut(s)	749, 779, 3253, 3283
Bsc4I	CCNNNNNNNGG	4 cut(s)	312, 459, 1801, 3308
Bse118I	RCCGGY	1 cut(s)	2755
Bse3DI	GCAATG	4 cut(s)	443, 786, 2414, 3215
Bse8I	GATNNNNATC	1 cut(s)	1989
BseBI	CCWGG	9 cut(s)	324, 384, 648, 844, 897, 1536, 2293, 2616, 3450
BseGI	GGATG	7 cut(s)	321, 1143, 1291, 1473, 1810, 2301, 2323
BseJI	GATNNNNATC	1 cut(s)	1989
BseLI	CCNNNNNNNGG	4 cut(s)	312, 459, 1801, 3308
BseMI	GCAATG	4 cut(s)	443, 786, 2414, 3215
BseMII	CTCAG	6 cut(s)	254, 611, 1593, 2246, 3054, 3182
BseRI	GAGGAG	3 cut(s)	123, 930, 3339
BshFI	GGCC	1 cut(s)	2772
BshNI	GGYRCC	2 cut(s)	2407, 3002
BshTI	ACCGGT	1 cut(s)	2755
BsiHKAI	GWGCWC	1 cut(s)	3748
BsiHKCI	CYCGRG	4 cut(s)	458, 1234, 1462, 2199
BsiSI	CCGG	3 cut(s)	453, 2756, 3302
BslFI	GGGAC	7 cut(s)	262, 1155, 1954, 2054, 2656, 2924, 3608
BslI	CCNNNNNNNGG	4 cut(s)	312, 459, 1801, 3308
BsmAI	GTCTC	7 cut(s)	249, 870, 1158, 1598, 2294, 2375, 2829
BsmBI	CGTCTC	2 cut(s)	870, 2375
BsmFI	GGGAC	7 cut(s)	262, 1155, 1954, 2054, 2656, 2924, 3608
BsnI	GGCC	1 cut(s)	2772
BsoBI	CYCGRG	4 cut(s)	458, 1234, 1462, 2199
Bsp119I	TTCGAA	2 cut(s)	428, 1923
Bsp1286I	GDGCHC	2 cut(s)	896, 3748
Bsp1407I	TGTACA	1 cut(s)	3204
Bsp19I	CCATGG	2 cut(s)	1033, 3234
BspACI	CCGC	7 cut(s)	228, 261, 605, 639, 854, 1384, 2315
BspANI	GGCC	1 cut(s)	2772
BspCNI	CTCAG	6 cut(s)	253, 612, 1594, 2245, 3055, 3181
BspLI	GGNNCC	6 cut(s)	215, 509, 893, 2220, 2409, 3004
BspMAI	CTGCAG	3 cut(s)	481, 3562, 3696
BspPI	GGATC	9 cut(s)	8, 658, 1217, 1369, 1465, 2142, 2213, 2226, 2901
BspT104I	TTCGAA	2 cut(s)	428, 1923
BspT107I	GGYRCC	2 cut(s)	2407, 3002
BspTI	CTTAAG	2 cut(s)	1016, 3668
BsrDI	GCAATG	4 cut(s)	443, 786, 2414, 3215
BsrFI	RCCGGY	1 cut(s)	2755
BsrGI	TGTACA	1 cut(s)	3204
BssAI	RCCGGY	1 cut(s)	2755
BssNAI	GTATAC	1 cut(s)	2093
BssNI	GRCGYC	2 cut(s)	84, 2384
BssT1I	CCWWGG	5 cut(s)	217, 1033, 1953, 2465, 3234
Bst1107I	GTATAC	1 cut(s)	2093
Bst2UI	CCWGG	9 cut(s)	324, 384, 648, 844, 897, 1536, 2293, 2616, 3450
Bst6I	CTCTTC	4 cut(s)	2316, 2867, 2985, 3345
BstACI	GRCGYC	2 cut(s)	84, 2384
BstAFI	CTTAAG	2 cut(s)	1016, 3668
BstAPI	GCANNNNNTGC	1 cut(s)	1756
BstAUI	TGTACA	1 cut(s)	3204
BstBAI	YACGTR	1 cut(s)	3014
BstBI	TTCGAA	2 cut(s)	428, 1923
BstC8I	GCNNGC	5 cut(s)	228, 2119, 2421, 2574, 3562
BstDSI	CCRYGG	2 cut(s)	1033, 3234
BstEII	GGTNACC	1 cut(s)	1004
BstENI	CCTNNNNNAGG	1 cut(s)	1799
BstF5I	GGATG	7 cut(s)	321, 1143, 1291, 1473, 1810, 2301, 2323
BstHHI	GCGC	1 cut(s)	2883
BstMAI	GTCTC	7 cut(s)	249, 870, 1158, 1598, 2294, 2375, 2829
BstMWI	GCNNNNNNNGC	9 cut(s)	74, 302, 557, 638, 1138, 1756, 2237, 3217, 3647
BstNI	CCWGG	9 cut(s)	324, 384, 648, 844, 897, 1536, 2293, 2616, 3450
BstNSI	RCATGY	4 cut(s)	1060, 1423, 2658, 3601
BstPI	GGTNACC	1 cut(s)	1004
BstSCI	CCNGG	9 cut(s)	322, 382, 646, 842, 895, 1534, 2291, 2614, 3448
BstSFI	CTRYAG	5 cut(s)	477, 1581, 2806, 3558, 3692
BstV2I	GAAGAC	4 cut(s)	48, 470, 2436, 2598
BstX2I	RGATCY	5 cut(s)	650, 1222, 2218, 2960, 3506
BstXI	CCANNNNNNTGG	2 cut(s)	2641, 3280
BstYI	RGATCY	5 cut(s)	650, 1222, 2218, 2960, 3506
BstZ17I	GTATAC	1 cut(s)	2093
BsuI	GTATCC	1 cut(s)	2638
BsuRI	GGCC	1 cut(s)	2772
BtgI	CCRYGG	2 cut(s)	1033, 3234
BtgZI	GCGATG	1 cut(s)	279
BtsCI	GGATG	7 cut(s)	321, 1143, 1291, 1473, 1810, 2301, 2323
BtsI	GCAGTG	4 cut(s)	1856, 2128, 3207, 3689
Cac8I	GCNNGC	5 cut(s)	228, 2119, 2421, 2574, 3562
CaiI	CAGNNNCTG	2 cut(s)	2805, 3557
CfoI	GCGC	1 cut(s)	2883
Cfr10I	RCCGGY	1 cut(s)	2755
Cfr13I	GGNCC	2 cut(s)	1163, 2053
CseI	GACGC	4 cut(s)	475, 887, 2392, 3647
Csp6I	GTAC	7 cut(s)	186, 319, 2721, 2973, 3003, 3165, 3205
CspAI	ACCGGT	1 cut(s)	2755
CspCI	CAANNNNNGTGG	2 cut(s)	2503, 2538
CviQI	GTAC	7 cut(s)	186, 319, 2721, 2973, 3003, 3165, 3205
DraI	TTTAAA	1 cut(s)	961
Eam1104I	CTCTTC	4 cut(s)	2316, 2867, 2985, 3345
EarI	CTCTTC	4 cut(s)	2316, 2867, 2985, 3345
Eco130I	CCWWGG	5 cut(s)	217, 1033, 1953, 2465, 3234
Eco24I	GRGCYC	1 cut(s)	896
Eco32I	GATATC	1 cut(s)	2598
Eco47I	GGWCC	2 cut(s)	1163, 2053
Eco57I	CTGAAG	6 cut(s)	484, 1243, 1512, 3057, 3326, 3438
Eco88I	CYCGRG	4 cut(s)	458, 1234, 1462, 2199
Eco91I	GGTNACC	1 cut(s)	1004
EcoNI	CCTNNNNNAGG	1 cut(s)	1799
EcoO65I	GGTNACC	1 cut(s)	1004
EcoRI	GAATTC	2 cut(s)	3044, 3536
EcoRII	CCWGG	9 cut(s)	322, 382, 646, 842, 895, 1534, 2291, 2614, 3448
EcoRV	GATATC	1 cut(s)	2598
EcoT14I	CCWWGG	5 cut(s)	217, 1033, 1953, 2465, 3234
EcoT22I	ATGCAT	1 cut(s)	1291
EcoT38I	GRGCYC	1 cut(s)	896
ErhI	CCWWGG	5 cut(s)	217, 1033, 1953, 2465, 3234
Esp3I	CGTCTC	2 cut(s)	870, 2375
FalI	AAGNNNNNCTT	2 cut(s)	1185, 1217
FaqI	GGGAC	7 cut(s)	262, 1155, 1954, 2054, 2656, 2924, 3608
FauI	CCCGC	1 cut(s)	235
FauNDI	CATATG	1 cut(s)	1051
FbaI	TGATCA	3 cut(s)	1204, 2481, 3610
FblI	GTMKAC	3 cut(s)	30, 81, 2092
FokI	GGATG	7 cut(s)	328, 1150, 1298, 1480, 1817, 2308, 2330
FriOI	GRGCYC	1 cut(s)	896
FspBI	CTAG	6 cut(s)	348, 579, 1458, 2271, 3294, 3533
FspI	TGCGCA	1 cut(s)	2882
GlaI	GCGC	1 cut(s)	2882
GsuI	CTGGAG	5 cut(s)	879, 927, 2226, 2853, 3432
HaeIII	GGCC	1 cut(s)	2772
HapII	CCGG	3 cut(s)	453, 2756, 3302
HgaI	GACGC	4 cut(s)	475, 887, 2392, 3647
HhaI	GCGC	1 cut(s)	2883
Hin1I	GRCGYC	2 cut(s)	84, 2384
Hin6I	GCGC	1 cut(s)	2881
HinP1I	GCGC	1 cut(s)	2881
HincII	GTYRAC	4 cut(s)	31, 82, 1837, 3523
HindII	GTYRAC	4 cut(s)	31, 82, 1837, 3523
HpaII	CCGG	3 cut(s)	453, 2756, 3302
Hpy166II	GTNNAC	8 cut(s)	31, 82, 748, 799, 1837, 2093, 3205, 3523
Hpy8I	GTNNAC	8 cut(s)	31, 82, 748, 799, 1837, 2093, 3205, 3523
Hpy99I	CGWCG	8 cut(s)	35, 38, 41, 50, 83, 86, 89, 3056
HpyAV	CCTTC	4 cut(s)	178, 971, 1352, 2004
HpyCH4IV	ACGT	3 cut(s)	84, 887, 3013
HpyF10VI	GCNNNNNNNGC	9 cut(s)	74, 302, 557, 638, 1138, 1756, 2237, 3217, 3647
HpySE526I	ACGT	3 cut(s)	84, 887, 3013
Hsp92I	GRCGYC	2 cut(s)	84, 2384
HspAI	GCGC	1 cut(s)	2881
KpnI	GGTACC	1 cut(s)	3006
Ksp22I	TGATCA	3 cut(s)	1204, 2481, 3610
LmnI	GCTCC	4 cut(s)	891, 2207, 3529, 3751
MaeI	CTAG	6 cut(s)	348, 579, 1458, 2271, 3294, 3533
MaeII	ACGT	3 cut(s)	84, 887, 3013
MfeI	CAATTG	2 cut(s)	1515, 3375
MflI	RGATCY	5 cut(s)	650, 1222, 2218, 2960, 3506
MhlI	GDGCHC	2 cut(s)	896, 3748
MlyI	GAGTC	7 cut(s)	450, 1177, 2276, 2513, 3340, 3353, 3718
MmeI	TCCRAC	2 cut(s)	188, 2112
Mph1103I	ATGCAT	1 cut(s)	1291
MroXI	GAANNNNTTC	3 cut(s)	1116, 1789, 3385
MslI	CAYNNNNRTG	4 cut(s)	314, 364, 2639, 3582
MspA1I	CMGCKG	1 cut(s)	68
MspCI	CTTAAG	2 cut(s)	1016, 3668
MspI	CCGG	3 cut(s)	453, 2756, 3302
MspR9I	CCNGG	9 cut(s)	324, 384, 648, 844, 897, 1536, 2293, 2616, 3450
MunI	CAATTG	2 cut(s)	1515, 3375
MvaI	CCWGG	9 cut(s)	324, 384, 648, 844, 897, 1536, 2293, 2616, 3450
MwoI	GCNNNNNNNGC	9 cut(s)	74, 302, 557, 638, 1138, 1756, 2237, 3217, 3647
NcoI	CCATGG	2 cut(s)	1033, 3234
NdeI	CATATG	1 cut(s)	1051
NlaIV	GGNNCC	6 cut(s)	215, 509, 893, 2220, 2409, 3004
NmuCI	GTSAC	8 cut(s)	88, 389, 1632, 1778, 1853, 2000, 2279, 2505
NsbI	TGCGCA	1 cut(s)	2882
NsiI	ATGCAT	1 cut(s)	1291
NspI	RCATGY	4 cut(s)	1060, 1423, 2658, 3601
NspV	TTCGAA	2 cut(s)	428, 1923
PaeR7I	CTCGAG	2 cut(s)	1234, 2199
PcsI	WCGNNNNNNNCGW	4 cut(s)	36, 42, 45, 51
PdmI	GAANNNNTTC	3 cut(s)	1116, 1789, 3385
PfeI	GAWTC	5 cut(s)	1876, 2326, 2738, 2911, 3386
PflFI	GACNNNGTC	2 cut(s)	86, 1841
PflMI	CCANNNNNTGG	1 cut(s)	312
PfoI	TCCNGGA	2 cut(s)	1534, 3448
PinAI	ACCGGT	1 cut(s)	2755
PleI	GAGTC	7 cut(s)	450, 1176, 2276, 2512, 3340, 3353, 3717
PpsI	GAGTC	7 cut(s)	450, 1176, 2276, 2512, 3340, 3353, 3717
Ppu21I	YACGTR	1 cut(s)	3014
PshBI	ATTAAT	1 cut(s)	375
PsiI	TTATAA	1 cut(s)	2969
Psp6I	CCWGG	9 cut(s)	322, 382, 646, 842, 895, 1534, 2291, 2614, 3448
PspEI	GGTNACC	1 cut(s)	1004
PspGI	CCWGG	9 cut(s)	322, 382, 646, 842, 895, 1534, 2291, 2614, 3448
PspN4I	GGNNCC	6 cut(s)	215, 509, 893, 2220, 2409, 3004
PspPI	GGNCC	2 cut(s)	1163, 2053
PspXI	VCTCGAGB	2 cut(s)	1234, 2199
PstI	CTGCAG	3 cut(s)	481, 3562, 3696
PstNI	CAGNNNCTG	2 cut(s)	2805, 3557
PsuI	RGATCY	5 cut(s)	650, 1222, 2218, 2960, 3506
PsyI	GACNNNGTC	2 cut(s)	86, 1841
PvuII	CAGCTG	1 cut(s)	68
RsaI	GTAC	7 cut(s)	187, 320, 2722, 2974, 3004, 3166, 3206
RsaNI	GTAC	7 cut(s)	186, 319, 2721, 2973, 3003, 3165, 3205
RseI	CAYNNNNRTG	4 cut(s)	314, 364, 2639, 3582
SalI	GTCGAC	2 cut(s)	29, 80
Sau96I	GGNCC	2 cut(s)	1163, 2053
ScaI	AGTACT	4 cut(s)	187, 2722, 2974, 3166
SchI	GAGTC	7 cut(s)	450, 1177, 2276, 2513, 3340, 3353, 3718
ScrFI	CCNGG	9 cut(s)	324, 384, 648, 844, 897, 1536, 2293, 2616, 3450
SduI	GDGCHC	2 cut(s)	896, 3748
SfcI	CTRYAG	5 cut(s)	477, 1581, 2806, 3558, 3692
Sfr274I	CTCGAG	2 cut(s)	1234, 2199
SfuI	TTCGAA	2 cut(s)	428, 1923
SgrDI	CGTCGACG	1 cut(s)	80
SinI	GGWCC	2 cut(s)	1163, 2053
SlaI	CTCGAG	2 cut(s)	1234, 2199
SmiI	ATTTAAAT	1 cut(s)	961
SmiMI	CAYNNNNRTG	4 cut(s)	314, 364, 2639, 3582
SmlI	CTYRAG	5 cut(s)	1016, 1234, 1693, 2199, 3668
SmoI	CTYRAG	5 cut(s)	1016, 1234, 1693, 2199, 3668
SsiI	CCGC	7 cut(s)	228, 261, 605, 639, 854, 1384, 2315
SspI	AATATT	2 cut(s)	524, 2529
SspMI	CTAG	6 cut(s)	348, 579, 1458, 2271, 3294, 3533
StyD4I	CCNGG	9 cut(s)	322, 382, 646, 842, 895, 1534, 2291, 2614, 3448
StyI	CCWWGG	5 cut(s)	217, 1033, 1953, 2465, 3234
SwaI	ATTTAAAT	1 cut(s)	961
TaiI	ACGT	3 cut(s)	87, 890, 3016
TatI	WGTACW	5 cut(s)	185, 2720, 2972, 3164, 3204
TauI	GCSGC	3 cut(s)	264, 608, 857
TfiI	GAWTC	5 cut(s)	1876, 2326, 2738, 2911, 3386
TseFI	GTSAC	8 cut(s)	88, 389, 1632, 1778, 1853, 2000, 2279, 2505
Tsp45I	GTSAC	8 cut(s)	88, 389, 1632, 1778, 1853, 2000, 2279, 2505
TspGWI	ACGGA	2 cut(s)	2045, 2603
Tth111I	GACNNNGTC	2 cut(s)	86, 1841
Van91I	CCANNNNNTGG	1 cut(s)	312
Vha464I	CTTAAG	2 cut(s)	1016, 3668
VpaK11BI	GGWCC	2 cut(s)	1163, 2053
VspI	ATTAAT	1 cut(s)	375
XagI	CCTNNNNNAGG	1 cut(s)	1799
XbaI	TCTAGA	1 cut(s)	2270
XceI	RCATGY	4 cut(s)	1060, 1423, 2658, 3601
XcmI	CCANNNNNNNNNTGG	1 cut(s)	962
XhoI	CTCGAG	2 cut(s)	1234, 2199
XmiI	GTMKAC	3 cut(s)	30, 81, 2092
XmnI	GAANNNNTTC	3 cut(s)	1116, 1789, 3385
XspI	CTAG	6 cut(s)	348, 579, 1458, 2271, 3294, 3533
ZraI	GACGTC	1 cut(s)	85
ZrmI	AGTACT	4 cut(s)	187, 2722, 2974, 3166
Zsp2I	ATGCAT	1 cut(s)	1291

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.