RH7CG423400

DEAD DEAH box RNA helicase family protein

Basic Information

Type: Sequence Only
Biological Identity
rosa_samantha
Unknown
Physical Location & Seq
Reverse (-)
0 .. 0
1 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG423400.1

Sequence Viewer

Length: 4152 bp
ATGACCTCCACCGATCCTCACCACATAGTCGACGACGACGAAGACGACGATTTCGATTGGGAAGCAGCTGCCAGAGCCGTCGACGTCGTCACCCAGACCACCGCAAAGCCCACATCTTCCCATTTTGCCCCTCCTCCCCCAATTCAGGAACCACCGTTTCCTCCAACCTTCAACAACAAGCCCAGTACTTCACGGCAGACCACTCTCGATAGGTTCATTGGGAAGCCCGCCCCAAAGCCTCAGCCCGAAATTCGAGACTGCGGCAATGAGAGAGTGTCCCGTGTTCAAATTGATGCCGAAAAAGCCAACACTTGGATGTACCCAGTTAATTTTCCTGGGCGTGACTATCAATTTGCTATCACCAAGACAGCACTTTTTTCGAATACGCTGGTGGCATTGCCAACCGGACTCGGGAAGACGCTTATCGCTGCAGTTGTTATGTATAACTACTTCAGATGGTTCCCTGATGGAAAGATAGTCTTTGCTGCTCCTTCTCGACCACTTGTTACACAACAAATAGAAGCATGCCATAATATTGTAGGAATACCACAAGAATGGACAATTGATATGACAGGTCAGATAAGTCCTACAAAAAGAGCATGCTTTTGGAAAACTAAACGAGTTTTCTTTGTTACTCCACAAGTGCTGGAGAAGGACATTCAGTCTGGAACATGCTCAGTCGAAAATTTGGTATGCTTGGTGATTGATGAAGCTCACCGAGCATTAGGGAACTATGCTTCTAGTGTTGCAGTTCGTGAGTTAATGGCGGCACAAGTGCCACTGAGAATTTTAGCTTTGACCGCAACACCAGGATCTAAGCAGCAGACTGTTCAGCAAATTATTGATAATTTGTGTATATCATCACTTGAATACCGTGAAGAAAATGATGCTGATGTCAGCCCTTATGTTCACAACAGGGAGGTAGAGTTGATTAAGGTGGCAATGGGTCAAGATGCTATGGACATAAGTAATAAGATATATGATGCAATACGACCATATTTAACCAGGCTTTGTGCGGCTGGAGTTCTCCCAAATAGAGACGCTCAAACGTGGAGCCCAGGCGAGTTACTTAGGTTTAGGGAGAAATTTCGTCTTGCACCTCCTCCAGACTTCCCCCAATTTAAATATGGAGAAATTGAAGGTTGGTATGGAGTTCTTCTTACAGGTTACCACATTCTTAAGCTATTATCAAGCCATGGAATAAGACCAGCATATGACATGCTTGAAGAAAAGTTAAAAAGGGGGTTTTTTGCCAAGTATATGAGTAGAAGTGAAGATGTTCATAAAGCAAAGCTAAGGATGCAGCAAAGTCTGTCTCATGGTGGTCCGAGTCCCAAGTTATCCAAAATGTTAGAAGTATTGCTTGATCATTTCAAAACAAATGATCCACAAAACTCGAGGGTTATGATTTTCTCAAACTTCAGGGGAAGTGTCAGGGAGATAATGGATGCATTGGCAAACATTGGGAATTTAGTTAAAGCTACCGAGTTTATTGGTCAGAGTTCAGGGAAAATATTAAAAGGCCAGTCACAAAAAGTTCAACAAGCTGTGTTGGAGAAATTTCGTGCTGGTGGATACAATGTCATTGTTGCCACATCAATTGGCGAAGAAGGTTTGGATATAATGGAAGTCGATCTTGTTATATGCTTTGATGCAAATGTATCACCATTGAGGATGATTCAACGCATGGGGAGAACTGGAAGGAAGCATGATGGACGAGTTGTAGTTTTAGCCTGTGAAGGATCAGAGTTGAAAGGTTACAAGCGGAAGCTAACAAACAGCAAGAATGTGAGCAAACACATGCGAAATGGGGGAATAAATAGCTTCAATTTTCATTCTAGCCCGAGGATGATCCCTCACATTTTCAAACCTGAAGTCCAATATGTTGAGTTTTCAATTGAACAATTCATTCGTCCTGGAAAGAAAGTCAAAGATGATAATGATATTCAGACACCTGTTACTATAGACAAATTAACTGTTGCTGAGACTGGTTTAGTTGCCAAGTATTTCCAGTCACATGACGTAACATGGAAACCATCTCTTATTGCCTTTCCTCACTTCCAAACCTATCCCTCAAGAGTGTATAAAGTAATGCACTCGCCTCGAACAACAATGCTAATTGATACAATGCAATCTTTGCAAGGATTATCCTTTTCCAGTGACAGAAAAATTTCCCTCATCGAGGCTGAGGTCTGTTCAGACGATTGCTTAACAGTTGACACTGTCGAGCAGTGTGACAACAGAGAAGATTTGCTGAATCTTGATGGTTCAAAGAAACAATCACAGGAAATAGGACTGGATTTCGAACTACAAACTACTGGGACATTGGAAACCAAGGAGAAGCATAGCGACCATGATTTATCTGATGAAAATCCTTCTGGTCACTCTTTTCTCTTTGGTTCAGATGTTGTTGATGTTGATGCTTCTGGAAAGGTCCGTATCATATCTGTCCCTATTCTTCATGGCAAAAGTATACCAAATACCAAGTTTGCAAGTGCAAGCAGTGGTAAGTTGGATCGTTTGAAGCAAAGTTCTTGCCATGTAAGAACATCAGATGAAGAACAAACAGAAGTAACTACTCGAGCTGGAGCTAATGGGGATCCAGAAATGGCTCAGATAGCATATATAAGGAATGATACACCAACTTGGTCTAGATTGTGCGACTCTGAAACCTGGATGGAGACAACAATCAATGCGGATGAAGAGAATCCTAAAAAGCCAATTCTCAAAGGAAACTTTCCAAATGGAGATAGTGCTTGTGAGACGCCTGATGTTCTGAAAAGCAAGGCACCGACATTGCTGGCTGATGAAGACGACAACCTTTTCAGAGATGGTGAGCTTAGTCCAAGGCTTACTAATTTGATCAAAAGTGGAGTTGTTCCAGAGTCACCTATCAATAATAGTGGAATATTAGATACCATAAATAAGTATGTAGTTCCTGATGCTGTTTCGCCTGCCCAATTACCTACGGAACTGATATCGAAGTCTTCAAGTCCTGGGAAAAATGGAAAAGCCACTGATATGGATACCAGTGCATGTGAAACAAATGTGTCCCTTTTTCCTACTGACATTGAAATTCAATCTCCCTTGCACAATAGGAGTACTGCCAGTATAAATGAATCTACCTCCACATCACCGGTTATTGACAGAGGCCAAACTGTTTTGGCAGACCTTACAAACAGTAGCTGTAGCAAAGATTGGTGTATAGGTTCTGGAGACAAGTCGCAGAGTGTGAAACAGACACGCAAGTTGAAGAGGTTGCGCAAAGTTGGGGATCATTGGAAAAGTAGGAATCAGGAAAGCATGACAACCAATGATGTCCCAAGAGCAAACCTGACCAGATCTTTTATAAGTACTACTCTTCCTACTAAGCATCTTAGAGGTACCAAAATACGTGCAAAGAAGTCGGTTAATGATGTGAGGGAATTCATAGACGAGGAAGCTGAGGTATCTTCAGAGGATATATCTGATGATGAAGAAGATGAACCAGACAACTATTCAAATGATAGTTTCATAGATGACAGGATAAATTCTCCGGCTGCAAGTACTCAGGCTGCAACCAGTGGAATTGACATGATGGCAGTGTACAGGCGTTCATTGCTCACCCAATCACCCATGGAGAAGCAGCCAAGCAGTTCAGCCACATTTTCTCCCAATTCTGTGGCAACGATAACTAGGACACCGGAAACTGGAAGTTCTGGTGGAAAAACATCTTTCTCTCTTCAGACTCCTCAAAGCGACTCTACAAATCTGCCAATTGGAATAGATTCAAAGTCTTTCCATAAGAATTGGAACTCTGAAGCCAGAACTTTTACAACTGGTGTTTCTCCAGGATATGAAAGAGATATTGAAAGTCGAAAAAGAAAATCGAGTTTTCATCATTCAAGATCTGTTCCTGCTGTCAACTTGGAGCTAGAATTCTCGTTGCAATCAGAGGCTGCAGGCAGAAATATGCAGCACAGTGATGCACATGGGGACATGCTTTATGATGATCAGTTTTATGAGGGTCTTGATCTTGACGCATTGGAAGCACAAGCTACAATTCTTCTTAAGCAGAAATCAGAATTGCCACTGCAGAAGCCACAGATGAGTCAGTTAAACCCAGAAAATCCTAATCTCGACTGTGCACCATCATTTGATCTTGGGATATGA

Protein Analysis

1383

Amino Acids

153.63

Weight (kDa)

5.76

Isoelectric Point (pI)

48.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DEAD PF00270 120 - 274 6.9e-18 DEAD/DEAH box helicase
ResIII PF04851 126 - 270 6.2e-18 Type III restriction enzyme, res subunit
Helicase_C PF00271 453 - 569 1.1e-19 Helicase conserved C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3350
AatII GACGTC 1 cut(s) 87
Acc16I TGCGCA 1 cut(s) 3263
Acc65I GGTACC 1 cut(s) 3383
AccB1I GGYRCC 2 cut(s) 2788, 3383
AccB7I CCANNNNNTGG 1 cut(s) 312
AccI GTMKAC 3 cut(s) 30, 81, 2473
AciI CCGC 8 cut(s) 102, 228, 261, 767, 801, 1016, 1765, 2696
AclWI GGATC 9 cut(s) 8, 820, 1379, 1750, 1846, 2523, 2594, 2607, 3282
AcuI CTGAAG 6 cut(s) 436, 1405, 1893, 3438, 3707, 3819
AcyI GRCGYC 2 cut(s) 84, 2765
AfaI GTAC 7 cut(s) 187, 320, 3103, 3355, 3385, 3547, 3587
AfiI CCNNNNNNNGG 5 cut(s) 145, 312, 411, 2182, 3689
AflII CTTAAG 2 cut(s) 1178, 4049
AgeI ACCGGT 1 cut(s) 3136
AhdI GACNNNNNGTC 1 cut(s) 661
AjnI CCWGG 8 cut(s) 334, 808, 1004, 1057, 1915, 2672, 2995, 3829
Alw21I GWGCWC 1 cut(s) 4129
Alw26I GTCTC 7 cut(s) 249, 1032, 1320, 1979, 2675, 2756, 3210
Alw44I GTGCAC 1 cut(s) 4125
AlwI GGATC 9 cut(s) 8, 820, 1379, 1750, 1846, 2523, 2594, 2607, 3282
AlwNI CAGNNNCTG 2 cut(s) 3186, 3938
Ama87I CYCGRG 4 cut(s) 410, 1396, 1843, 2580
AoxI GGCC 2 cut(s) 1522, 3151
ApaLI GTGCAC 1 cut(s) 4125
ArsI GACNNNNNNTTYG 6 cut(s) 35, 67, 335, 367, 1860, 1892
AsiGI ACCGGT 1 cut(s) 3136
Asp700I GAANNNNTTC 3 cut(s) 1278, 2170, 3766
Asp718I GGTACC 1 cut(s) 3383
AspLEI GCGC 1 cut(s) 3264
AspS9I GGNCC 2 cut(s) 1325, 2434
AsuII TTCGAA 2 cut(s) 380, 2304
AvaI CYCGRG 4 cut(s) 410, 1396, 1843, 2580
AvaII GGWCC 2 cut(s) 1325, 2434
BaeGI GKGCMC 1 cut(s) 4129
BamHI GGATCC 1 cut(s) 2599
BanI GGYRCC 2 cut(s) 2788, 3383
BanII GRGCYC 1 cut(s) 1058
BarI GAAGNNNNNNTAC 2 cut(s) 434, 466
BbsI GAAGAC 4 cut(s) 48, 422, 2817, 2979
Bbv12I GWGCWC 1 cut(s) 4129
BbvCI CCTCAGC 3 cut(s) 240, 2187, 3444
BccI CCATC 9 cut(s) 450, 461, 1706, 2044, 2258, 2671, 2825, 3571, 4138
BceAI ACGGC 2 cut(s) 62, 209
BcgI CGANNNNNNTGC 6 cut(s) 360, 394, 2084, 2118, 3387, 3421
BciT130I CCWGG 8 cut(s) 336, 810, 1006, 1059, 1917, 2674, 2997, 3831
BciVI GTATCC 2 cut(s) 1568, 3019
BclI TGATCA 3 cut(s) 1366, 2862, 3991
BcoDI GTCTC 7 cut(s) 249, 1032, 1320, 1979, 2675, 2756, 3210
BfaI CTAG 5 cut(s) 741, 1839, 2652, 3675, 3914
BfmI CTRYAG 5 cut(s) 429, 1962, 3187, 3939, 4073
BfrI CTTAAG 2 cut(s) 1178, 4049
BfuI GTATCC 2 cut(s) 1568, 3019
BglII AGATCT 2 cut(s) 3341, 3887
BmcAI AGTACT 4 cut(s) 187, 3103, 3355, 3547
Bme1390I CCNGG 8 cut(s) 336, 810, 1006, 1059, 1917, 2674, 2997, 3831
Bme18I GGWCC 2 cut(s) 1325, 2434
BmeRI GACNNNNNGTC 1 cut(s) 661
BmeT110I CYCGRG 4 cut(s) 410, 1396, 1843, 2580
BmgT120I GGNCC 2 cut(s) 1325, 2434
BmiI GGNNCC 6 cut(s) 150, 461, 1055, 2601, 2790, 3385
BmrFI CCNGG 8 cut(s) 336, 810, 1006, 1059, 1917, 2674, 2997, 3831
BmrI ACTGGG 3 cut(s) 177, 317, 2328
BmuI ACTGGG 3 cut(s) 177, 317, 2328
BpiI GAAGAC 4 cut(s) 48, 422, 2817, 2979
BpmI CTGGAG 6 cut(s) 668, 1041, 1089, 2607, 3234, 3813
Bpu10I CCTNAGC 4 cut(s) 240, 1295, 2187, 3444
Bpu14I TTCGAA 2 cut(s) 380, 2304
BpuEI CTTGAG 1 cut(s) 2059
BsaAI YACGTR 1 cut(s) 3395
BsaBI GATNNNNATC 1 cut(s) 2370
BsaHI GRCGYC 2 cut(s) 84, 2765
BsaJI CCNNGG 8 cut(s) 335, 1057, 1195, 1844, 2334, 2846, 2996, 3615
BsaWI WCCGGW 3 cut(s) 404, 3136, 3682
BsaXI ACNNNNNCTCC 4 cut(s) 911, 941, 3634, 3664
Bsc4I CCNNNNNNNGG 5 cut(s) 145, 312, 411, 2182, 3689
Bse118I RCCGGY 1 cut(s) 3136
Bse3DI GCAATG 5 cut(s) 271, 395, 948, 2795, 3596
Bse8I GATNNNNATC 1 cut(s) 2370
BseBI CCWGG 8 cut(s) 336, 810, 1006, 1059, 1917, 2674, 2997, 3831
BseDI CCNNGG 8 cut(s) 335, 1057, 1195, 1844, 2334, 2846, 2996, 3615
BseGI GGATG 7 cut(s) 321, 1305, 1453, 1680, 1854, 2682, 2704
BseJI GATNNNNATC 1 cut(s) 2370
BseLI CCNNNNNNNGG 5 cut(s) 145, 312, 411, 2182, 3689
BseMI GCAATG 5 cut(s) 271, 395, 948, 2795, 3596
BseMII CTCAG 8 cut(s) 254, 690, 773, 1974, 2178, 2627, 3435, 3563
BseRI GAGGAG 3 cut(s) 123, 1092, 3720
BseSI GKGCMC 1 cut(s) 4129
BshFI GGCC 2 cut(s) 1524, 3153
BshNI GGYRCC 2 cut(s) 2788, 3383
BshTI ACCGGT 1 cut(s) 3136
BsiHKAI GWGCWC 1 cut(s) 4129
BsiHKCI CYCGRG 4 cut(s) 410, 1396, 1843, 2580
BsiSI CCGG 4 cut(s) 405, 3137, 3536, 3683
BslFI GGGAC 7 cut(s) 262, 1317, 2335, 2435, 3037, 3305, 3989
BslI CCNNNNNNNGG 5 cut(s) 145, 312, 411, 2182, 3689
BsmAI GTCTC 7 cut(s) 249, 1032, 1320, 1979, 2675, 2756, 3210
BsmBI CGTCTC 2 cut(s) 1032, 2756
BsmFI GGGAC 7 cut(s) 262, 1317, 2335, 2435, 3037, 3305, 3989
BsnI GGCC 2 cut(s) 1524, 3153
BsoBI CYCGRG 4 cut(s) 410, 1396, 1843, 2580
Bsp119I TTCGAA 2 cut(s) 380, 2304
Bsp1286I GDGCHC 2 cut(s) 1058, 4129
Bsp1407I TGTACA 1 cut(s) 3585
Bsp19I CCATGG 2 cut(s) 1195, 3615
BspACI CCGC 8 cut(s) 102, 228, 261, 767, 801, 1016, 1765, 2696
BspANI GGCC 2 cut(s) 1524, 3153
BspCNI CTCAG 8 cut(s) 253, 689, 774, 1975, 2179, 2626, 3436, 3562
BspLI GGNNCC 6 cut(s) 150, 461, 1055, 2601, 2790, 3385
BspMAI CTGCAG 3 cut(s) 433, 3943, 4077
BspPI GGATC 9 cut(s) 8, 820, 1379, 1750, 1846, 2523, 2594, 2607, 3282
BspT104I TTCGAA 2 cut(s) 380, 2304
BspT107I GGYRCC 2 cut(s) 2788, 3383
BspTI CTTAAG 2 cut(s) 1178, 4049
BsrDI GCAATG 5 cut(s) 271, 395, 948, 2795, 3596
BsrFI RCCGGY 1 cut(s) 3136
BsrGI TGTACA 1 cut(s) 3585
BssAI RCCGGY 1 cut(s) 3136
BssECI CCNNGG 8 cut(s) 335, 1057, 1195, 1844, 2334, 2846, 2996, 3615
BssNAI GTATAC 1 cut(s) 2474
BssNI GRCGYC 2 cut(s) 84, 2765
BssT1I CCWWGG 4 cut(s) 1195, 2334, 2846, 3615
Bst1107I GTATAC 1 cut(s) 2474
Bst2UI CCWGG 8 cut(s) 336, 810, 1006, 1059, 1917, 2674, 2997, 3831
Bst6I CTCTTC 4 cut(s) 2697, 3248, 3366, 3726
BstACI GRCGYC 2 cut(s) 84, 2765
BstAFI CTTAAG 2 cut(s) 1178, 4049
BstAPI GCANNNNNTGC 1 cut(s) 2137
BstAUI TGTACA 1 cut(s) 3585
BstBAI YACGTR 1 cut(s) 3395
BstBI TTCGAA 2 cut(s) 380, 2304
BstC8I GCNNGC 7 cut(s) 228, 526, 601, 2500, 2802, 2955, 3943
BstDSI CCRYGG 2 cut(s) 1195, 3615
BstEII GGTNACC 1 cut(s) 1166
BstENI CCTNNNNNAGG 1 cut(s) 2180
BstF5I GGATG 7 cut(s) 321, 1305, 1453, 1680, 1854, 2682, 2704
BstHHI GCGC 1 cut(s) 3264
BstMAI GTCTC 7 cut(s) 249, 1032, 1320, 1979, 2675, 2756, 3210
BstMWI GCNNNNNNNGC 9 cut(s) 74, 302, 719, 800, 1300, 2137, 2618, 3598, 4028
BstNI CCWGG 8 cut(s) 336, 810, 1006, 1059, 1917, 2674, 2997, 3831
BstNSI RCATGY 7 cut(s) 528, 603, 675, 1222, 1804, 3039, 3982
BstPI GGTNACC 1 cut(s) 1166
BstSCI CCNGG 8 cut(s) 334, 808, 1004, 1057, 1915, 2672, 2995, 3829
BstSFI CTRYAG 5 cut(s) 429, 1962, 3187, 3939, 4073
BstSLI GKGCMC 1 cut(s) 4129
BstV2I GAAGAC 4 cut(s) 48, 422, 2817, 2979
BstX2I RGATCY 4 cut(s) 812, 2599, 3341, 3887
BstXI CCANNNNNNTGG 3 cut(s) 555, 3022, 3661
BstYI RGATCY 4 cut(s) 812, 2599, 3341, 3887
BstZ17I GTATAC 1 cut(s) 2474
BsuI GTATCC 2 cut(s) 1568, 3019
BsuRI GGCC 2 cut(s) 1524, 3153
BtgI CCRYGG 2 cut(s) 1195, 3615
BtsCI GGATG 7 cut(s) 321, 1305, 1453, 1680, 1854, 2682, 2704
BtsI GCAGTG 4 cut(s) 2237, 2509, 3588, 4070
Cac8I GCNNGC 7 cut(s) 228, 526, 601, 2500, 2802, 2955, 3943
CaiI CAGNNNCTG 2 cut(s) 3186, 3938
CfoI GCGC 1 cut(s) 3264
Cfr10I RCCGGY 1 cut(s) 3136
Cfr13I GGNCC 2 cut(s) 1325, 2434
CseI GACGC 4 cut(s) 427, 1049, 2773, 4028
Csp6I GTAC 7 cut(s) 186, 319, 3102, 3354, 3384, 3546, 3586
CspAI ACCGGT 1 cut(s) 3136
CspCI CAANNNNNGTGG 4 cut(s) 1582, 1617, 2884, 2919
CviQI GTAC 7 cut(s) 186, 319, 3102, 3354, 3384, 3546, 3586
DraI TTTAAA 1 cut(s) 1123
DriI GACNNNNNGTC 1 cut(s) 661
Eam1104I CTCTTC 4 cut(s) 2697, 3248, 3366, 3726
Eam1105I GACNNNNNGTC 1 cut(s) 661
EarI CTCTTC 4 cut(s) 2697, 3248, 3366, 3726
Eco130I CCWWGG 4 cut(s) 1195, 2334, 2846, 3615
Eco24I GRGCYC 1 cut(s) 1058
Eco32I GATATC 1 cut(s) 2979
Eco47I GGWCC 2 cut(s) 1325, 2434
Eco57I CTGAAG 6 cut(s) 436, 1405, 1893, 3438, 3707, 3819
Eco88I CYCGRG 4 cut(s) 410, 1396, 1843, 2580
Eco91I GGTNACC 1 cut(s) 1166
EcoNI CCTNNNNNAGG 1 cut(s) 2180
EcoO65I GGTNACC 1 cut(s) 1166
EcoRI GAATTC 2 cut(s) 3425, 3917
EcoRII CCWGG 8 cut(s) 334, 808, 1004, 1057, 1915, 2672, 2995, 3829
EcoRV GATATC 1 cut(s) 2979
EcoT14I CCWWGG 4 cut(s) 1195, 2334, 2846, 3615
EcoT22I ATGCAT 1 cut(s) 1453
EcoT38I GRGCYC 1 cut(s) 1058
ErhI CCWWGG 4 cut(s) 1195, 2334, 2846, 3615
Esp3I CGTCTC 2 cut(s) 1032, 2756
FalI AAGNNNNNCTT 6 cut(s) 464, 496, 1347, 1379, 1620, 1652
FaqI GGGAC 7 cut(s) 262, 1317, 2335, 2435, 3037, 3305, 3989
FauI CCCGC 1 cut(s) 235
FauNDI CATATG 1 cut(s) 1213
FbaI TGATCA 3 cut(s) 1366, 2862, 3991
FblI GTMKAC 3 cut(s) 30, 81, 2473
FokI GGATG 7 cut(s) 328, 1312, 1460, 1687, 1861, 2689, 2711
FriOI GRGCYC 1 cut(s) 1058
FspBI CTAG 5 cut(s) 741, 1839, 2652, 3675, 3914
FspI TGCGCA 1 cut(s) 3263
GlaI GCGC 1 cut(s) 3263
GsuI CTGGAG 6 cut(s) 668, 1041, 1089, 2607, 3234, 3813
HaeIII GGCC 2 cut(s) 1524, 3153
HapII CCGG 4 cut(s) 405, 3137, 3536, 3683
HgaI GACGC 4 cut(s) 427, 1049, 2773, 4028
HhaI GCGC 1 cut(s) 3264
Hin1I GRCGYC 2 cut(s) 84, 2765
Hin6I GCGC 1 cut(s) 3262
HinP1I GCGC 1 cut(s) 3262
HincII GTYRAC 4 cut(s) 31, 82, 2218, 3904
HindII GTYRAC 4 cut(s) 31, 82, 2218, 3904
HpaII CCGG 4 cut(s) 405, 3137, 3536, 3683
Hpy166II GTNNAC 8 cut(s) 31, 82, 910, 2218, 2474, 3586, 3904, 4127
Hpy8I GTNNAC 8 cut(s) 31, 82, 910, 2218, 2474, 3586, 3904, 4127
Hpy99I CGWCG 7 cut(s) 35, 38, 41, 50, 83, 86, 89
HpyAV CCTTC 8 cut(s) 178, 501, 646, 1133, 1604, 1695, 1733, 2385
HpyCH4IV ACGT 4 cut(s) 84, 1049, 2022, 3394
HpyF10VI GCNNNNNNNGC 9 cut(s) 74, 302, 719, 800, 1300, 2137, 2618, 3598, 4028
HpySE526I ACGT 4 cut(s) 84, 1049, 2022, 3394
Hsp92I GRCGYC 2 cut(s) 84, 2765
HspAI GCGC 1 cut(s) 3262
KpnI GGTACC 1 cut(s) 3387
Ksp22I TGATCA 3 cut(s) 1366, 2862, 3991
LmnI GCTCC 4 cut(s) 493, 1053, 2588, 3910
MaeI CTAG 5 cut(s) 741, 1839, 2652, 3675, 3914
MaeII ACGT 4 cut(s) 84, 1049, 2022, 3394
MfeI CAATTG 4 cut(s) 561, 1599, 1896, 3756
MflI RGATCY 4 cut(s) 812, 2599, 3341, 3887
MhlI GDGCHC 2 cut(s) 1058, 4129
MlyI GAGTC 7 cut(s) 402, 1339, 2657, 2894, 3721, 3734, 4099
MmeI TCCRAC 3 cut(s) 188, 1533, 2493
Mph1103I ATGCAT 1 cut(s) 1453
MroXI GAANNNNTTC 3 cut(s) 1278, 2170, 3766
MslI CAYNNNNRTG 4 cut(s) 314, 553, 3020, 3963
MspA1I CMGCKG 1 cut(s) 68
MspCI CTTAAG 2 cut(s) 1178, 4049
MspI CCGG 4 cut(s) 405, 3137, 3536, 3683
MspR9I CCNGG 8 cut(s) 336, 810, 1006, 1059, 1917, 2674, 2997, 3831
MunI CAATTG 4 cut(s) 561, 1599, 1896, 3756
MvaI CCWGG 8 cut(s) 336, 810, 1006, 1059, 1917, 2674, 2997, 3831
MwoI GCNNNNNNNGC 9 cut(s) 74, 302, 719, 800, 1300, 2137, 2618, 3598, 4028
NcoI CCATGG 2 cut(s) 1195, 3615
NdeI CATATG 1 cut(s) 1213
NlaIV GGNNCC 6 cut(s) 150, 461, 1055, 2601, 2790, 3385
NmuCI GTSAC 8 cut(s) 88, 341, 1527, 2013, 2159, 2234, 2381, 2886
NsbI TGCGCA 1 cut(s) 3263
NsiI ATGCAT 1 cut(s) 1453
NspI RCATGY 7 cut(s) 528, 603, 675, 1222, 1804, 3039, 3982
NspV TTCGAA 2 cut(s) 380, 2304
PaeI GCATGC 2 cut(s) 528, 603
PaeR7I CTCGAG 2 cut(s) 1396, 2580
PcsI WCGNNNNNNNCGW 4 cut(s) 36, 42, 45, 51
PdmI GAANNNNTTC 3 cut(s) 1278, 2170, 3766
PfeI GAWTC 6 cut(s) 1678, 2257, 2707, 3119, 3292, 3767
PflFI GACNNNGTC 2 cut(s) 86, 2222
PflMI CCANNNNNTGG 1 cut(s) 312
PfoI TCCNGGA 2 cut(s) 1915, 3829
PinAI ACCGGT 1 cut(s) 3136
PleI GAGTC 7 cut(s) 402, 1338, 2657, 2893, 3721, 3734, 4098
PpsI GAGTC 7 cut(s) 402, 1338, 2657, 2893, 3721, 3734, 4098
Ppu21I YACGTR 1 cut(s) 3395
PsiI TTATAA 1 cut(s) 3350
Psp6I CCWGG 8 cut(s) 334, 808, 1004, 1057, 1915, 2672, 2995, 3829
PspEI GGTNACC 1 cut(s) 1166
PspGI CCWGG 8 cut(s) 334, 808, 1004, 1057, 1915, 2672, 2995, 3829
PspN4I GGNNCC 6 cut(s) 150, 461, 1055, 2601, 2790, 3385
PspPI GGNCC 2 cut(s) 1325, 2434
PspXI VCTCGAGB 2 cut(s) 1396, 2580
PstI CTGCAG 3 cut(s) 433, 3943, 4077
PstNI CAGNNNCTG 2 cut(s) 3186, 3938
PsuI RGATCY 4 cut(s) 812, 2599, 3341, 3887
PsyI GACNNNGTC 2 cut(s) 86, 2222
PvuII CAGCTG 1 cut(s) 68
RsaI GTAC 7 cut(s) 187, 320, 3103, 3355, 3385, 3547, 3587
RsaNI GTAC 7 cut(s) 186, 319, 3102, 3354, 3384, 3546, 3586
RseI CAYNNNNRTG 4 cut(s) 314, 553, 3020, 3963
SalI GTCGAC 2 cut(s) 29, 80
Sau96I GGNCC 2 cut(s) 1325, 2434
ScaI AGTACT 4 cut(s) 187, 3103, 3355, 3547
SchI GAGTC 7 cut(s) 402, 1339, 2657, 2894, 3721, 3734, 4099
ScrFI CCNGG 8 cut(s) 336, 810, 1006, 1059, 1917, 2674, 2997, 3831
SduI GDGCHC 2 cut(s) 1058, 4129
SfcI CTRYAG 5 cut(s) 429, 1962, 3187, 3939, 4073
Sfr274I CTCGAG 2 cut(s) 1396, 2580
SfuI TTCGAA 2 cut(s) 380, 2304
SgrDI CGTCGACG 1 cut(s) 80
SinI GGWCC 2 cut(s) 1325, 2434
SlaI CTCGAG 2 cut(s) 1396, 2580
SmiI ATTTAAAT 1 cut(s) 1123
SmiMI CAYNNNNRTG 4 cut(s) 314, 553, 3020, 3963
SmlI CTYRAG 5 cut(s) 1178, 1396, 2074, 2580, 4049
SmoI CTYRAG 5 cut(s) 1178, 1396, 2074, 2580, 4049
SphI GCATGC 2 cut(s) 528, 603
SsiI CCGC 8 cut(s) 102, 228, 261, 767, 801, 1016, 1765, 2696
SspI AATATT 3 cut(s) 535, 1515, 2910
SspMI CTAG 5 cut(s) 741, 1839, 2652, 3675, 3914
StyD4I CCNGG 8 cut(s) 334, 808, 1004, 1057, 1915, 2672, 2995, 3829
StyI CCWWGG 4 cut(s) 1195, 2334, 2846, 3615
SwaI ATTTAAAT 1 cut(s) 1123
TaiI ACGT 4 cut(s) 87, 1052, 2025, 3397
TatI WGTACW 5 cut(s) 185, 3101, 3353, 3545, 3585
TauI GCSGC 3 cut(s) 264, 770, 1019
TfiI GAWTC 6 cut(s) 1678, 2257, 2707, 3119, 3292, 3767
TseFI GTSAC 8 cut(s) 88, 341, 1527, 2013, 2159, 2234, 2381, 2886
Tsp45I GTSAC 8 cut(s) 88, 341, 1527, 2013, 2159, 2234, 2381, 2886
TspGWI ACGGA 2 cut(s) 2426, 2984
Tth111I GACNNNGTC 2 cut(s) 86, 2222
Van91I CCANNNNNTGG 1 cut(s) 312
Vha464I CTTAAG 2 cut(s) 1178, 4049
VneI GTGCAC 1 cut(s) 4125
VpaK11BI GGWCC 2 cut(s) 1325, 2434
XagI CCTNNNNNAGG 1 cut(s) 2180
XbaI TCTAGA 1 cut(s) 2651
XceI RCATGY 7 cut(s) 528, 603, 675, 1222, 1804, 3039, 3982
XcmI CCANNNNNNNNNTGG 1 cut(s) 1124
XhoI CTCGAG 2 cut(s) 1396, 2580
XmiI GTMKAC 3 cut(s) 30, 81, 2473
XmnI GAANNNNTTC 3 cut(s) 1278, 2170, 3766
XspI CTAG 5 cut(s) 741, 1839, 2652, 3675, 3914
ZraI GACGTC 1 cut(s) 85
ZrmI AGTACT 4 cut(s) 187, 3103, 3355, 3547
Zsp2I ATGCAT 1 cut(s) 1453
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.