DEAD DEAH box RNA helicase family protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G35530 AT1G35530 AT1G35530 AT1G35530 AT1G35530 AT1G36020 |
| fragaria_vesca | FvH4_7g03750 |
| malus_domestica | MD15G1404400.v1.1 |
| prunus_persica | Prupe.1G551100_v2.0.a1 Prupe.2G019600_v2.0.a1 Prupe.2G019700_v2.0.a1 |
| pyrus_communis | pycom15g36170 pycom15g36180 |
| rosa_chinensis | RchiOBHm_Chr7g0228871 RchiOBHm_Chr7g0228881 RchiOBHm_Chr7g0228951 |
| rosa_laevigata | RLG00000001539 RLG00000002150 RLG00000022432 |
| rosa_multiflora | Rmu_sc0000721.1_g000006 Rmu_sc0004517.1_g000001 Rmu_sc0005913.1_g000001 Rmu_sc0005913.1_g000026 Rmu_sc0011218.1_g000006 Rmu_sc0013945.1_g000010 |
| rosa_roxburghii | Rroxscaffold_3G00230830 Rroxscaffold_3G00238230 |
| rosa_rugosa | Rorug07G0252600 Rorug07G0254200 |
| rosa_samantha | Rh7AG405800 Rh7BG333000 Rh7BG385100 Rh7BG385200 Rh7BG385300 Rh7CG423400 Rh7DG341000 Rh7DG399800 Rh7DG399900 |
| rosa_wichuraiana | Rw7G033620 Rw7G033650 Rw7G033670 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 3350 |
| AatII | GACGTC | 1 cut(s) | 87 |
| Acc16I | TGCGCA | 1 cut(s) | 3263 |
| Acc65I | GGTACC | 1 cut(s) | 3383 |
| AccB1I | GGYRCC | 2 cut(s) | 2788, 3383 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 312 |
| AccI | GTMKAC | 3 cut(s) | 30, 81, 2473 |
| AciI | CCGC | 7 cut(s) | 102, 228, 261, 767, 801, 1765, 2696 |
| AclWI | GGATC | 9 cut(s) | 8, 820, 1379, 1750, 1846, 2523, 2594, 2607, 3282 |
| AcsI | RAATTY | 9 cut(s) | 249, 786, 1085, 1468, 1559, 2169, 3075, 3425, 3529 |
| AcuI | CTGAAG | 6 cut(s) | 436, 1405, 1893, 3438, 3707, 3819 |
| AcyI | GRCGYC | 2 cut(s) | 84, 2765 |
| AfaI | GTAC | 7 cut(s) | 187, 320, 3103, 3355, 3385, 3547, 3587 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 252, 312, 411, 2182, 3621, 3689 |
| AflII | CTTAAG | 2 cut(s) | 1178, 4049 |
| AgeI | ACCGGT | 1 cut(s) | 3136 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 661 |
| AhlI | ACTAGT | 1 cut(s) | 3818 |
| AjnI | CCWGG | 7 cut(s) | 808, 1004, 1057, 1915, 2672, 2995, 3829 |
| Alw21I | GWGCWC | 1 cut(s) | 4129 |
| Alw26I | GTCTC | 6 cut(s) | 1032, 1320, 1979, 2675, 2756, 3210 |
| AlwI | GGATC | 9 cut(s) | 8, 820, 1379, 1750, 1846, 2523, 2594, 2607, 3282 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 3186, 3938 |
| Ama87I | CYCGRG | 4 cut(s) | 410, 1396, 1843, 2580 |
| AoxI | GGCC | 3 cut(s) | 1522, 3151, 4006 |
| ApoI | RAATTY | 9 cut(s) | 249, 786, 1085, 1468, 1559, 2169, 3075, 3425, 3529 |
| ArsI | GACNNNNNNTTYG | 8 cut(s) | 35, 67, 98, 130, 335, 367, 1860, 1892 |
| AsiGI | ACCGGT | 1 cut(s) | 3136 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1278, 2170, 3766 |
| Asp718I | GGTACC | 1 cut(s) | 3383 |
| AspLEI | GCGC | 1 cut(s) | 3264 |
| AspS9I | GGNCC | 3 cut(s) | 1325, 2434, 4006 |
| AsuC2I | CCSGG | 1 cut(s) | 336 |
| AsuII | TTCGAA | 1 cut(s) | 380 |
| AvaI | CYCGRG | 4 cut(s) | 410, 1396, 1843, 2580 |
| AvaII | GGWCC | 2 cut(s) | 1325, 2434 |
| BamHI | GGATCC | 1 cut(s) | 2599 |
| BanI | GGYRCC | 2 cut(s) | 2788, 3383 |
| BanII | GRGCYC | 1 cut(s) | 1058 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 434, 466 |
| BbsI | GAAGAC | 5 cut(s) | 48, 108, 422, 2817, 2979 |
| Bbv12I | GWGCWC | 1 cut(s) | 4129 |
| BbvCI | CCTCAGC | 2 cut(s) | 240, 3444 |
| BceAI | ACGGC | 3 cut(s) | 62, 209, 3552 |
| BcgI | CGANNNNNNTGC | 8 cut(s) | 93, 127, 360, 394, 2084, 2118, 3387, 3421 |
| BciT130I | CCWGG | 7 cut(s) | 810, 1006, 1059, 1917, 2674, 2997, 3831 |
| BciVI | GTATCC | 2 cut(s) | 1568, 3019 |
| BclI | TGATCA | 3 cut(s) | 1366, 2862, 3991 |
| BcnI | CCSGG | 1 cut(s) | 336 |
| BcoDI | GTCTC | 6 cut(s) | 1032, 1320, 1979, 2675, 2756, 3210 |
| BcuI | ACTAGT | 1 cut(s) | 3818 |
| BfaI | CTAG | 5 cut(s) | 741, 1839, 2652, 3675, 3819 |
| BfmI | CTRYAG | 4 cut(s) | 429, 1962, 3187, 3939 |
| BfrI | CTTAAG | 2 cut(s) | 1178, 4049 |
| BfuI | GTATCC | 2 cut(s) | 1568, 3019 |
| BglII | AGATCT | 2 cut(s) | 3341, 3887 |
| BmcAI | AGTACT | 4 cut(s) | 187, 3103, 3355, 3547 |
| Bme1390I | CCNGG | 8 cut(s) | 336, 810, 1006, 1059, 1917, 2674, 2997, 3831 |
| Bme18I | GGWCC | 2 cut(s) | 1325, 2434 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 661 |
| BmeT110I | CYCGRG | 4 cut(s) | 410, 1396, 1843, 2580 |
| BmgT120I | GGNCC | 3 cut(s) | 1325, 2434, 4006 |
| BmiI | GGNNCC | 5 cut(s) | 461, 1055, 2601, 2790, 3385 |
| BmrFI | CCNGG | 8 cut(s) | 336, 810, 1006, 1059, 1917, 2674, 2997, 3831 |
| BmrI | ACTGGG | 3 cut(s) | 177, 317, 2328 |
| BmuI | ACTGGG | 3 cut(s) | 177, 317, 2328 |
| BpiI | GAAGAC | 5 cut(s) | 48, 108, 422, 2817, 2979 |
| BpmI | CTGGAG | 5 cut(s) | 668, 1089, 2607, 3234, 3813 |
| Bpu10I | CCTNAGC | 3 cut(s) | 240, 1295, 3444 |
| Bpu14I | TTCGAA | 1 cut(s) | 380 |
| BpuEI | CTTGAG | 1 cut(s) | 2059 |
| BpuMI | CCSGG | 1 cut(s) | 336 |
| BsaAI | YACGTR | 1 cut(s) | 3395 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2370 |
| BsaHI | GRCGYC | 2 cut(s) | 84, 2765 |
| BsaJI | CCNNGG | 8 cut(s) | 335, 1057, 1195, 1844, 2334, 2846, 2996, 3615 |
| BsaWI | WCCGGW | 3 cut(s) | 404, 3136, 3682 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 911, 941, 3634, 3664 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 252, 312, 411, 2182, 3621, 3689 |
| Bse118I | RCCGGY | 2 cut(s) | 3136, 4069 |
| Bse3DI | GCAATG | 5 cut(s) | 395, 948, 2795, 3596, 3923 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2370 |
| BseBI | CCWGG | 7 cut(s) | 810, 1006, 1059, 1917, 2674, 2997, 3831 |
| BseDI | CCNNGG | 8 cut(s) | 335, 1057, 1195, 1844, 2334, 2846, 2996, 3615 |
| BseGI | GGATG | 9 cut(s) | 164, 321, 1305, 1453, 1680, 1854, 2191, 2682, 2704 |
| BseJI | GATNNNNATC | 1 cut(s) | 2370 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 252, 312, 411, 2182, 3621, 3689 |
| BseMI | GCAATG | 5 cut(s) | 395, 948, 2795, 3596, 3923 |
| BseMII | CTCAG | 7 cut(s) | 254, 690, 773, 1974, 2627, 3435, 3563 |
| BseRI | GAGGAG | 3 cut(s) | 123, 1092, 3720 |
| BsgI | GTGCAG | 1 cut(s) | 4094 |
| BshFI | GGCC | 3 cut(s) | 1524, 3153, 4008 |
| BshNI | GGYRCC | 2 cut(s) | 2788, 3383 |
| BshTI | ACCGGT | 1 cut(s) | 3136 |
| BsiHKAI | GWGCWC | 1 cut(s) | 4129 |
| BsiHKCI | CYCGRG | 4 cut(s) | 410, 1396, 1843, 2580 |
| BsiSI | CCGG | 5 cut(s) | 335, 405, 3137, 3683, 4070 |
| BslFI | GGGAC | 8 cut(s) | 262, 269, 1317, 2335, 2435, 3037, 3305, 3989 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 252, 312, 411, 2182, 3621, 3689 |
| BsmAI | GTCTC | 6 cut(s) | 1032, 1320, 1979, 2675, 2756, 3210 |
| BsmBI | CGTCTC | 2 cut(s) | 1032, 2756 |
| BsmFI | GGGAC | 8 cut(s) | 262, 269, 1317, 2335, 2435, 3037, 3305, 3989 |
| BsnI | GGCC | 3 cut(s) | 1524, 3153, 4008 |
| BsoBI | CYCGRG | 4 cut(s) | 410, 1396, 1843, 2580 |
| Bsp119I | TTCGAA | 1 cut(s) | 380 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1058, 4129 |
| Bsp1407I | TGTACA | 1 cut(s) | 3585 |
| Bsp19I | CCATGG | 2 cut(s) | 1195, 3615 |
| BspACI | CCGC | 7 cut(s) | 102, 228, 261, 767, 801, 1765, 2696 |
| BspANI | GGCC | 3 cut(s) | 1524, 3153, 4008 |
| BspCNI | CTCAG | 7 cut(s) | 253, 689, 774, 1975, 2626, 3436, 3562 |
| BspLI | GGNNCC | 5 cut(s) | 461, 1055, 2601, 2790, 3385 |
| BspMAI | CTGCAG | 2 cut(s) | 433, 3943 |
| BspPI | GGATC | 9 cut(s) | 8, 820, 1379, 1750, 1846, 2523, 2594, 2607, 3282 |
| BspT104I | TTCGAA | 1 cut(s) | 380 |
| BspT107I | GGYRCC | 2 cut(s) | 2788, 3383 |
| BspTI | CTTAAG | 2 cut(s) | 1178, 4049 |
| BsrDI | GCAATG | 5 cut(s) | 395, 948, 2795, 3596, 3923 |
| BsrFI | RCCGGY | 2 cut(s) | 3136, 4069 |
| BsrGI | TGTACA | 1 cut(s) | 3585 |
| BssAI | RCCGGY | 2 cut(s) | 3136, 4069 |
| BssECI | CCNNGG | 8 cut(s) | 335, 1057, 1195, 1844, 2334, 2846, 2996, 3615 |
| BssNAI | GTATAC | 1 cut(s) | 2474 |
| BssNI | GRCGYC | 2 cut(s) | 84, 2765 |
| BssT1I | CCWWGG | 4 cut(s) | 1195, 2334, 2846, 3615 |
| Bst1107I | GTATAC | 1 cut(s) | 2474 |
| Bst2UI | CCWGG | 7 cut(s) | 810, 1006, 1059, 1917, 2674, 2997, 3831 |
| Bst6I | CTCTTC | 4 cut(s) | 2697, 3248, 3366, 3726 |
| BstACI | GRCGYC | 2 cut(s) | 84, 2765 |
| BstAFI | CTTAAG | 2 cut(s) | 1178, 4049 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2137 |
| BstAUI | TGTACA | 1 cut(s) | 3585 |
| BstBAI | YACGTR | 1 cut(s) | 3395 |
| BstBI | TTCGAA | 1 cut(s) | 380 |
| BstC8I | GCNNGC | 7 cut(s) | 228, 526, 601, 2500, 2802, 2955, 3943 |
| BstDSI | CCRYGG | 2 cut(s) | 1195, 3615 |
| BstEII | GGTNACC | 1 cut(s) | 1166 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2180 |
| BstF5I | GGATG | 9 cut(s) | 164, 321, 1305, 1453, 1680, 1854, 2191, 2682, 2704 |
| BstHHI | GCGC | 1 cut(s) | 3264 |
| BstMAI | GTCTC | 6 cut(s) | 1032, 1320, 1979, 2675, 2756, 3210 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 74, 302, 719, 800, 1300, 2137, 2618, 3598, 4028 |
| BstNI | CCWGG | 7 cut(s) | 810, 1006, 1059, 1917, 2674, 2997, 3831 |
| BstNSI | RCATGY | 7 cut(s) | 528, 603, 675, 1222, 1804, 3039, 3982 |
| BstPI | GGTNACC | 1 cut(s) | 1166 |
| BstSCI | CCNGG | 8 cut(s) | 334, 808, 1004, 1057, 1915, 2672, 2995, 3829 |
| BstSFI | CTRYAG | 4 cut(s) | 429, 1962, 3187, 3939 |
| BstV2I | GAAGAC | 5 cut(s) | 48, 108, 422, 2817, 2979 |
| BstX2I | RGATCY | 5 cut(s) | 812, 1384, 2599, 3341, 3887 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 555, 3022, 3661 |
| BstYI | RGATCY | 5 cut(s) | 812, 1384, 2599, 3341, 3887 |
| BstZ17I | GTATAC | 1 cut(s) | 2474 |
| BsuI | GTATCC | 2 cut(s) | 1568, 3019 |
| BsuRI | GGCC | 3 cut(s) | 1524, 3153, 4008 |
| BtgI | CCRYGG | 2 cut(s) | 1195, 3615 |
| BtgZI | GCGATG | 1 cut(s) | 279 |
| BtsCI | GGATG | 9 cut(s) | 164, 321, 1305, 1453, 1680, 1854, 2191, 2682, 2704 |
| BtsI | GCAGTG | 3 cut(s) | 2237, 2509, 3588 |
| Cac8I | GCNNGC | 7 cut(s) | 228, 526, 601, 2500, 2802, 2955, 3943 |
| CaiI | CAGNNNCTG | 2 cut(s) | 3186, 3938 |
| CfoI | GCGC | 1 cut(s) | 3264 |
| Cfr10I | RCCGGY | 2 cut(s) | 3136, 4069 |
| Cfr13I | GGNCC | 3 cut(s) | 1325, 2434, 4006 |
| CseI | GACGC | 4 cut(s) | 427, 1049, 2773, 4028 |
| Csp6I | GTAC | 7 cut(s) | 186, 319, 3102, 3354, 3384, 3546, 3586 |
| CspAI | ACCGGT | 1 cut(s) | 3136 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1582, 1617, 2884, 2919 |
| CviQI | GTAC | 7 cut(s) | 186, 319, 3102, 3354, 3384, 3546, 3586 |
| DraI | TTTAAA | 1 cut(s) | 1123 |
| DriI | GACNNNNNGTC | 1 cut(s) | 661 |
| Eam1104I | CTCTTC | 4 cut(s) | 2697, 3248, 3366, 3726 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 661 |
| EarI | CTCTTC | 4 cut(s) | 2697, 3248, 3366, 3726 |
| Eco130I | CCWWGG | 4 cut(s) | 1195, 2334, 2846, 3615 |
| Eco24I | GRGCYC | 1 cut(s) | 1058 |
| Eco32I | GATATC | 1 cut(s) | 2979 |
| Eco47I | GGWCC | 2 cut(s) | 1325, 2434 |
| Eco57I | CTGAAG | 6 cut(s) | 436, 1405, 1893, 3438, 3707, 3819 |
| Eco88I | CYCGRG | 4 cut(s) | 410, 1396, 1843, 2580 |
| Eco91I | GGTNACC | 1 cut(s) | 1166 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2180 |
| EcoO109I | RGGNCCY | 1 cut(s) | 4006 |
| EcoO65I | GGTNACC | 1 cut(s) | 1166 |
| EcoRI | GAATTC | 1 cut(s) | 3425 |
| EcoRII | CCWGG | 7 cut(s) | 808, 1004, 1057, 1915, 2672, 2995, 3829 |
| EcoRV | GATATC | 1 cut(s) | 2979 |
| EcoT14I | CCWWGG | 4 cut(s) | 1195, 2334, 2846, 3615 |
| EcoT22I | ATGCAT | 1 cut(s) | 1453 |
| EcoT38I | GRGCYC | 1 cut(s) | 1058 |
| ErhI | CCWWGG | 4 cut(s) | 1195, 2334, 2846, 3615 |
| Esp3I | CGTCTC | 2 cut(s) | 1032, 2756 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 464, 496, 1347, 1379, 1620, 1652 |
| FaqI | GGGAC | 8 cut(s) | 262, 269, 1317, 2335, 2435, 3037, 3305, 3989 |
| FauI | CCCGC | 1 cut(s) | 235 |
| FauNDI | CATATG | 1 cut(s) | 1213 |
| FbaI | TGATCA | 3 cut(s) | 1366, 2862, 3991 |
| FblI | GTMKAC | 3 cut(s) | 30, 81, 2473 |
| FokI | GGATG | 9 cut(s) | 151, 328, 1312, 1460, 1687, 1861, 2198, 2689, 2711 |
| FriOI | GRGCYC | 1 cut(s) | 1058 |
| FspBI | CTAG | 5 cut(s) | 741, 1839, 2652, 3675, 3819 |
| FspI | TGCGCA | 1 cut(s) | 3263 |
| GlaI | GCGC | 1 cut(s) | 3263 |
| GsuI | CTGGAG | 5 cut(s) | 668, 1089, 2607, 3234, 3813 |
| HaeIII | GGCC | 3 cut(s) | 1524, 3153, 4008 |
| HapII | CCGG | 5 cut(s) | 335, 405, 3137, 3683, 4070 |
| HgaI | GACGC | 4 cut(s) | 427, 1049, 2773, 4028 |
| HhaI | GCGC | 1 cut(s) | 3264 |
| Hin1I | GRCGYC | 2 cut(s) | 84, 2765 |
| Hin6I | GCGC | 1 cut(s) | 3262 |
| HinP1I | GCGC | 1 cut(s) | 3262 |
| HincII | GTYRAC | 4 cut(s) | 31, 82, 2218, 3904 |
| HindII | GTYRAC | 4 cut(s) | 31, 82, 2218, 3904 |
| HpaII | CCGG | 5 cut(s) | 335, 405, 3137, 3683, 4070 |
| Hpy166II | GTNNAC | 7 cut(s) | 31, 82, 910, 2218, 2474, 3586, 3904 |
| Hpy8I | GTNNAC | 7 cut(s) | 31, 82, 910, 2218, 2474, 3586, 3904 |
| Hpy99I | CGWCG | 8 cut(s) | 35, 38, 41, 50, 83, 86, 89, 3437 |
| HpyAV | CCTTC | 8 cut(s) | 178, 501, 646, 1133, 1604, 1695, 1733, 2385 |
| HpyCH4IV | ACGT | 4 cut(s) | 84, 1049, 2022, 3394 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 74, 302, 719, 800, 1300, 2137, 2618, 3598, 4028 |
| HpySE526I | ACGT | 4 cut(s) | 84, 1049, 2022, 3394 |
| Hsp92I | GRCGYC | 2 cut(s) | 84, 2765 |
| HspAI | GCGC | 1 cut(s) | 3262 |
| KpnI | GGTACC | 1 cut(s) | 3387 |
| Ksp22I | TGATCA | 3 cut(s) | 1366, 2862, 3991 |
| LmnI | GCTCC | 5 cut(s) | 493, 1053, 2588, 3910, 4132 |
| MaeI | CTAG | 5 cut(s) | 741, 1839, 2652, 3675, 3819 |
| MaeII | ACGT | 4 cut(s) | 84, 1049, 2022, 3394 |
| MfeI | CAATTG | 4 cut(s) | 561, 1599, 1896, 3756 |
| MflI | RGATCY | 5 cut(s) | 812, 1384, 2599, 3341, 3887 |
| MhlI | GDGCHC | 2 cut(s) | 1058, 4129 |
| MlyI | GAGTC | 7 cut(s) | 402, 1339, 2657, 2894, 3721, 3734, 4099 |
| MmeI | TCCRAC | 2 cut(s) | 1533, 2493 |
| Mph1103I | ATGCAT | 1 cut(s) | 1453 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1278, 2170, 3766 |
| MslI | CAYNNNNRTG | 4 cut(s) | 314, 553, 3020, 3963 |
| MspA1I | CMGCKG | 1 cut(s) | 68 |
| MspCI | CTTAAG | 2 cut(s) | 1178, 4049 |
| MspI | CCGG | 5 cut(s) | 335, 405, 3137, 3683, 4070 |
| MspR9I | CCNGG | 8 cut(s) | 336, 810, 1006, 1059, 1917, 2674, 2997, 3831 |
| MunI | CAATTG | 4 cut(s) | 561, 1599, 1896, 3756 |
| MvaI | CCWGG | 7 cut(s) | 810, 1006, 1059, 1917, 2674, 2997, 3831 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 74, 302, 719, 800, 1300, 2137, 2618, 3598, 4028 |
| NciI | CCSGG | 1 cut(s) | 336 |
| NcoI | CCATGG | 2 cut(s) | 1195, 3615 |
| NdeI | CATATG | 1 cut(s) | 1213 |
| NlaIV | GGNNCC | 5 cut(s) | 461, 1055, 2601, 2790, 3385 |
| NmuCI | GTSAC | 8 cut(s) | 88, 341, 1527, 2013, 2159, 2234, 2381, 2886 |
| NsbI | TGCGCA | 1 cut(s) | 3263 |
| NsiI | ATGCAT | 1 cut(s) | 1453 |
| NspI | RCATGY | 7 cut(s) | 528, 603, 675, 1222, 1804, 3039, 3982 |
| NspV | TTCGAA | 1 cut(s) | 380 |
| PaeI | GCATGC | 2 cut(s) | 528, 603 |
| PaeR7I | CTCGAG | 2 cut(s) | 1396, 2580 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 36, 42, 45, 51 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1278, 2170, 3766 |
| PfeI | GAWTC | 6 cut(s) | 1678, 2257, 2707, 3119, 3292, 3767 |
| PflFI | GACNNNGTC | 2 cut(s) | 86, 2222 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 312 |
| PfoI | TCCNGGA | 2 cut(s) | 1915, 3829 |
| PinAI | ACCGGT | 1 cut(s) | 3136 |
| PleI | GAGTC | 7 cut(s) | 402, 1338, 2657, 2893, 3721, 3734, 4098 |
| PpsI | GAGTC | 7 cut(s) | 402, 1338, 2657, 2893, 3721, 3734, 4098 |
| Ppu21I | YACGTR | 1 cut(s) | 3395 |
| PsiI | TTATAA | 1 cut(s) | 3350 |
| Psp6I | CCWGG | 7 cut(s) | 808, 1004, 1057, 1915, 2672, 2995, 3829 |
| PspEI | GGTNACC | 1 cut(s) | 1166 |
| PspGI | CCWGG | 7 cut(s) | 808, 1004, 1057, 1915, 2672, 2995, 3829 |
| PspN4I | GGNNCC | 5 cut(s) | 461, 1055, 2601, 2790, 3385 |
| PspPI | GGNCC | 3 cut(s) | 1325, 2434, 4006 |
| PspXI | VCTCGAGB | 2 cut(s) | 1396, 2580 |
| PstI | CTGCAG | 2 cut(s) | 433, 3943 |
| PstNI | CAGNNNCTG | 2 cut(s) | 3186, 3938 |
| PsuI | RGATCY | 5 cut(s) | 812, 1384, 2599, 3341, 3887 |
| PsyI | GACNNNGTC | 2 cut(s) | 86, 2222 |
| PvuII | CAGCTG | 1 cut(s) | 68 |
| RsaI | GTAC | 7 cut(s) | 187, 320, 3103, 3355, 3385, 3547, 3587 |
| RsaNI | GTAC | 7 cut(s) | 186, 319, 3102, 3354, 3384, 3546, 3586 |
| RseI | CAYNNNNRTG | 4 cut(s) | 314, 553, 3020, 3963 |
| SalI | GTCGAC | 2 cut(s) | 29, 80 |
| Sau96I | GGNCC | 3 cut(s) | 1325, 2434, 4006 |
| ScaI | AGTACT | 4 cut(s) | 187, 3103, 3355, 3547 |
| SchI | GAGTC | 7 cut(s) | 402, 1339, 2657, 2894, 3721, 3734, 4099 |
| ScrFI | CCNGG | 8 cut(s) | 336, 810, 1006, 1059, 1917, 2674, 2997, 3831 |
| SduI | GDGCHC | 2 cut(s) | 1058, 4129 |
| SfcI | CTRYAG | 4 cut(s) | 429, 1962, 3187, 3939 |
| Sfr274I | CTCGAG | 2 cut(s) | 1396, 2580 |
| SfuI | TTCGAA | 1 cut(s) | 380 |
| SgrDI | CGTCGACG | 1 cut(s) | 80 |
| SinI | GGWCC | 2 cut(s) | 1325, 2434 |
| SlaI | CTCGAG | 2 cut(s) | 1396, 2580 |
| SmiI | ATTTAAAT | 1 cut(s) | 1123 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 314, 553, 3020, 3963 |
| SmlI | CTYRAG | 5 cut(s) | 1178, 1396, 2074, 2580, 4049 |
| SmoI | CTYRAG | 5 cut(s) | 1178, 1396, 2074, 2580, 4049 |
| SpeI | ACTAGT | 1 cut(s) | 3818 |
| SphI | GCATGC | 2 cut(s) | 528, 603 |
| SsiI | CCGC | 7 cut(s) | 102, 228, 261, 767, 801, 1765, 2696 |
| SspI | AATATT | 4 cut(s) | 535, 686, 1515, 2910 |
| SspMI | CTAG | 5 cut(s) | 741, 1839, 2652, 3675, 3819 |
| StyD4I | CCNGG | 8 cut(s) | 334, 808, 1004, 1057, 1915, 2672, 2995, 3829 |
| StyI | CCWWGG | 4 cut(s) | 1195, 2334, 2846, 3615 |
| SwaI | ATTTAAAT | 1 cut(s) | 1123 |
| TaiI | ACGT | 4 cut(s) | 87, 1052, 2025, 3397 |
| TatI | WGTACW | 5 cut(s) | 185, 3101, 3353, 3545, 3585 |
| TauI | GCSGC | 2 cut(s) | 264, 770 |
| TfiI | GAWTC | 6 cut(s) | 1678, 2257, 2707, 3119, 3292, 3767 |
| TseFI | GTSAC | 8 cut(s) | 88, 341, 1527, 2013, 2159, 2234, 2381, 2886 |
| Tsp45I | GTSAC | 8 cut(s) | 88, 341, 1527, 2013, 2159, 2234, 2381, 2886 |
| TspGWI | ACGGA | 2 cut(s) | 2426, 2984 |
| Tth111I | GACNNNGTC | 2 cut(s) | 86, 2222 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 312 |
| Vha464I | CTTAAG | 2 cut(s) | 1178, 4049 |
| VpaK11BI | GGWCC | 2 cut(s) | 1325, 2434 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2180 |
| XapI | RAATTY | 9 cut(s) | 249, 786, 1085, 1468, 1559, 2169, 3075, 3425, 3529 |
| XbaI | TCTAGA | 1 cut(s) | 2651 |
| XceI | RCATGY | 7 cut(s) | 528, 603, 675, 1222, 1804, 3039, 3982 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1012, 1124 |
| XhoI | CTCGAG | 2 cut(s) | 1396, 2580 |
| XmiI | GTMKAC | 3 cut(s) | 30, 81, 2473 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1278, 2170, 3766 |
| XspI | CTAG | 5 cut(s) | 741, 1839, 2652, 3675, 3819 |
| ZraI | GACGTC | 1 cut(s) | 85 |
| ZrmI | AGTACT | 4 cut(s) | 187, 3103, 3355, 3547 |
| Zsp2I | ATGCAT | 1 cut(s) | 1453 |