DEAD DEAH box RNA helicase family protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G35530 AT1G35530 AT1G35530 AT1G35530 AT1G35530 AT1G36020 |
| fragaria_vesca | FvH4_7g03750 |
| malus_domestica | MD15G1404400.v1.1 |
| prunus_persica | Prupe.1G551100_v2.0.a1 Prupe.2G019600_v2.0.a1 Prupe.2G019700_v2.0.a1 |
| pyrus_communis | pycom15g36170 pycom15g36180 |
| rosa_chinensis | RchiOBHm_Chr7g0228871 RchiOBHm_Chr7g0228881 RchiOBHm_Chr7g0228951 |
| rosa_laevigata | RLG00000001539 RLG00000002150 RLG00000022432 |
| rosa_multiflora | Rmu_sc0000721.1_g000006 Rmu_sc0004517.1_g000001 Rmu_sc0005913.1_g000001 Rmu_sc0005913.1_g000026 Rmu_sc0011218.1_g000006 Rmu_sc0013945.1_g000010 |
| rosa_roxburghii | Rroxscaffold_3G00230830 Rroxscaffold_3G00238230 |
| rosa_rugosa | Rorug07G0252600 Rorug07G0254200 |
| rosa_samantha | Rh7AG405800 Rh7BG333000 Rh7BG385100 Rh7BG385200 Rh7BG385300 Rh7CG423400 Rh7DG341000 Rh7DG399800 Rh7DG399900 |
| rosa_wichuraiana | Rw7G033620 Rw7G033650 Rw7G033670 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 970 |
| Acc36I | ACCTGC | 1 cut(s) | 970 |
| AccB1I | GGYRCC | 1 cut(s) | 1374 |
| AclWI | GGATC | 1 cut(s) | 1290 |
| AcsI | RAATTY | 3 cut(s) | 68, 649, 1080 |
| AcuI | CTGAAG | 3 cut(s) | 483, 654, 720 |
| AfaI | GTAC | 3 cut(s) | 76, 1132, 1407 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1350 |
| AgsI | TTSAA | 8 cut(s) | 50, 360, 643, 991, 999, 1085, 1475, 1497 |
| AjnI | CCWGG | 2 cut(s) | 123, 1003 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 501, 533 |
| AluBI | AGCT | 4 cut(s) | 56, 704, 847, 1194 |
| AluI | AGCT | 4 cut(s) | 56, 704, 847, 1194 |
| Alw21I | GWGCWC | 2 cut(s) | 849, 1455 |
| Alw26I | GTCTC | 5 cut(s) | 263, 774, 900, 1060, 1218 |
| AlwI | GGATC | 1 cut(s) | 1290 |
| AoxI | GGCC | 2 cut(s) | 31, 121 |
| ApoI | RAATTY | 3 cut(s) | 68, 649, 1080 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1350, 1382 |
| AseI | ATTAAT | 1 cut(s) | 278 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 441 |
| AspLEI | GCGC | 1 cut(s) | 194 |
| AspS9I | GGNCC | 3 cut(s) | 31, 121, 707 |
| AsuHPI | GGTGA | 7 cut(s) | 165, 386, 462, 854, 951, 1118, 1134 |
| AvaII | GGWCC | 1 cut(s) | 707 |
| BanI | GGYRCC | 1 cut(s) | 1374 |
| BanII | GRGCYC | 2 cut(s) | 849, 1162 |
| BbsI | GAAGAC | 4 cut(s) | 684, 825, 1318, 1358 |
| Bbv12I | GWGCWC | 2 cut(s) | 849, 1455 |
| BccI | CCATC | 3 cut(s) | 214, 328, 833 |
| BceAI | ACGGC | 1 cut(s) | 872 |
| BciT130I | CCWGG | 2 cut(s) | 125, 1005 |
| BciVI | GTATCC | 1 cut(s) | 77 |
| BcoDI | GTCTC | 5 cut(s) | 263, 774, 900, 1060, 1218 |
| BfaI | CTAG | 3 cut(s) | 146, 557, 941 |
| BfuAI | ACCTGC | 1 cut(s) | 970 |
| BfuI | GTATCC | 1 cut(s) | 77 |
| BglII | AGATCT | 2 cut(s) | 718, 1177 |
| Bme1390I | CCNGG | 2 cut(s) | 125, 1005 |
| Bme18I | GGWCC | 1 cut(s) | 707 |
| BmgT120I | GGNCC | 3 cut(s) | 31, 121, 707 |
| BmiI | GGNNCC | 1 cut(s) | 1376 |
| BmrFI | CCNGG | 2 cut(s) | 125, 1005 |
| BmrI | ACTGGG | 1 cut(s) | 486 |
| BmsI | GCATC | 3 cut(s) | 151, 529, 806 |
| BmuI | ACTGGG | 1 cut(s) | 486 |
| BpiI | GAAGAC | 4 cut(s) | 684, 825, 1318, 1358 |
| BpmI | CTGGAG | 1 cut(s) | 1242 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1505 |
| BsaBI | GATNNNNATC | 1 cut(s) | 936 |
| BsaJI | CCNNGG | 3 cut(s) | 581, 854, 1004 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1422, 1452 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1350 |
| Bse1I | ACTGG | 6 cut(s) | 34, 82, 210, 481, 982, 1403 |
| Bse3DI | GCAATG | 1 cut(s) | 1042 |
| Bse8I | GATNNNNATC | 1 cut(s) | 936 |
| BseBI | CCWGG | 2 cut(s) | 125, 1005 |
| BseDI | CCNNGG | 3 cut(s) | 581, 854, 1004 |
| BseGI | GGATG | 4 cut(s) | 1133, 1381, 1392, 1426 |
| BseJI | GATNNNNATC | 1 cut(s) | 936 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1350 |
| BseMI | GCAATG | 1 cut(s) | 1042 |
| BseMII | CTCAG | 4 cut(s) | 258, 483, 862, 1519 |
| BseNI | ACTGG | 6 cut(s) | 34, 82, 210, 481, 982, 1403 |
| BseRI | GAGGAG | 3 cut(s) | 509, 1349, 1446 |
| BshFI | GGCC | 2 cut(s) | 33, 123 |
| BshNI | GGYRCC | 1 cut(s) | 1374 |
| BsiHKAI | GWGCWC | 2 cut(s) | 849, 1455 |
| BslFI | GGGAC | 3 cut(s) | 493, 554, 872 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1350 |
| BsmAI | GTCTC | 5 cut(s) | 263, 774, 900, 1060, 1218 |
| BsmFI | GGGAC | 3 cut(s) | 493, 554, 872 |
| BsmI | GAATGC | 1 cut(s) | 598 |
| BsnI | GGCC | 2 cut(s) | 33, 123 |
| Bsp1286I | GDGCHC | 3 cut(s) | 849, 1162, 1455 |
| Bsp143I | GATC | 4 cut(s) | 142, 718, 1177, 1282 |
| BspANI | GGCC | 2 cut(s) | 33, 123 |
| BspCNI | CTCAG | 4 cut(s) | 259, 484, 861, 1518 |
| BspLI | GGNNCC | 1 cut(s) | 1376 |
| BspMI | ACCTGC | 1 cut(s) | 970 |
| BspPI | GGATC | 1 cut(s) | 1290 |
| BspQI | GCTCTTC | 1 cut(s) | 1473 |
| BspT107I | GGYRCC | 1 cut(s) | 1374 |
| BsrDI | GCAATG | 1 cut(s) | 1042 |
| BsrI | ACTGG | 6 cut(s) | 34, 82, 210, 481, 982, 1403 |
| BssECI | CCNNGG | 3 cut(s) | 581, 854, 1004 |
| BssMI | GATC | 4 cut(s) | 142, 718, 1177, 1282 |
| BssT1I | CCWWGG | 1 cut(s) | 581 |
| Bst2UI | CCWGG | 2 cut(s) | 125, 1005 |
| Bst4CI | ACNGT | 3 cut(s) | 262, 535, 1168 |
| Bst6I | CTCTTC | 4 cut(s) | 111, 219, 1473, 1491 |
| BstC8I | GCNNGC | 3 cut(s) | 619, 1117, 1252 |
| BstDEI | CTNAG | 4 cut(s) | 267, 492, 848, 1505 |
| BstDSI | CCRYGG | 1 cut(s) | 854 |
| BstF5I | GGATG | 4 cut(s) | 1133, 1381, 1392, 1426 |
| BstHHI | GCGC | 1 cut(s) | 194 |
| BstKTI | GATC | 4 cut(s) | 145, 721, 1180, 1285 |
| BstMAI | GTCTC | 5 cut(s) | 263, 774, 900, 1060, 1218 |
| BstMBI | GATC | 4 cut(s) | 142, 718, 1177, 1282 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 120 |
| BstNI | CCWGG | 2 cut(s) | 125, 1005 |
| BstNSI | RCATGY | 1 cut(s) | 744 |
| BstSCI | CCNGG | 2 cut(s) | 123, 1003 |
| BstV2I | GAAGAC | 4 cut(s) | 684, 825, 1318, 1358 |
| BstX2I | RGATCY | 2 cut(s) | 718, 1177 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 911 |
| BstYI | RGATCY | 2 cut(s) | 718, 1177 |
| BsuI | GTATCC | 1 cut(s) | 77 |
| BsuRI | GGCC | 2 cut(s) | 33, 123 |
| BtgI | CCRYGG | 1 cut(s) | 854 |
| BtsCI | GGATG | 4 cut(s) | 1133, 1381, 1392, 1426 |
| BtsI | GCAGTG | 1 cut(s) | 408 |
| BtsIMutI | CAGTG | 1 cut(s) | 408 |
| BveI | ACCTGC | 1 cut(s) | 970 |
| Cac8I | GCNNGC | 3 cut(s) | 619, 1117, 1252 |
| CfoI | GCGC | 1 cut(s) | 194 |
| Cfr13I | GGNCC | 3 cut(s) | 31, 121, 707 |
| Csp6I | GTAC | 3 cut(s) | 75, 1131, 1406 |
| CspCI | CAANNNNNGTGG | 6 cut(s) | 91, 126, 1024, 1059, 1177, 1212 |
| CviQI | GTAC | 3 cut(s) | 75, 1131, 1406 |
| DdeI | CTNAG | 4 cut(s) | 267, 492, 848, 1505 |
| DpnI | GATC | 4 cut(s) | 144, 720, 1179, 1284 |
| DpnII | GATC | 4 cut(s) | 142, 718, 1177, 1282 |
| DraI | TTTAAA | 2 cut(s) | 387, 1261 |
| Eam1104I | CTCTTC | 4 cut(s) | 111, 219, 1473, 1491 |
| EarI | CTCTTC | 4 cut(s) | 111, 219, 1473, 1491 |
| Ecl136II | GAGCTC | 1 cut(s) | 847 |
| Eco130I | CCWWGG | 1 cut(s) | 581 |
| Eco24I | GRGCYC | 2 cut(s) | 849, 1162 |
| Eco32I | GATATC | 2 cut(s) | 130, 234 |
| Eco47I | GGWCC | 1 cut(s) | 707 |
| Eco53kI | GAGCTC | 1 cut(s) | 847 |
| Eco57I | CTGAAG | 3 cut(s) | 483, 654, 720 |
| EcoICRI | GAGCTC | 1 cut(s) | 847 |
| EcoO109I | RGGNCCY | 1 cut(s) | 121 |
| EcoRII | CCWGG | 2 cut(s) | 123, 1003 |
| EcoRV | GATATC | 2 cut(s) | 130, 234 |
| EcoT14I | CCWWGG | 1 cut(s) | 581 |
| EcoT22I | ATGCAT | 2 cut(s) | 746, 1522 |
| EcoT38I | GRGCYC | 2 cut(s) | 849, 1162 |
| ErhI | CCWWGG | 1 cut(s) | 581 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 380, 412 |
| FaqI | GGGAC | 3 cut(s) | 493, 554, 872 |
| FauNDI | CATATG | 1 cut(s) | 246 |
| FokI | GGATG | 4 cut(s) | 1140, 1368, 1379, 1433 |
| FriOI | GRGCYC | 2 cut(s) | 849, 1162 |
| FspBI | CTAG | 3 cut(s) | 146, 557, 941 |
| GlaI | GCGC | 1 cut(s) | 193 |
| GsuI | CTGGAG | 1 cut(s) | 1242 |
| HaeIII | GGCC | 2 cut(s) | 33, 123 |
| HhaI | GCGC | 1 cut(s) | 194 |
| Hin6I | GCGC | 1 cut(s) | 192 |
| HinP1I | GCGC | 1 cut(s) | 192 |
| HincII | GTYRAC | 2 cut(s) | 406, 609 |
| HindII | GTYRAC | 2 cut(s) | 406, 609 |
| HinfI | GANTC | 7 cut(s) | 186, 448, 458, 730, 893, 1354, 1483 |
| HphI | GGTGA | 7 cut(s) | 165, 386, 462, 854, 951, 1118, 1134 |
| Hpy166II | GTNNAC | 4 cut(s) | 406, 609, 854, 914 |
| Hpy188I | TCNGA | 9 cut(s) | 447, 463, 673, 723, 735, 836, 875, 1234, 1491 |
| Hpy188III | TCNNGA | 9 cut(s) | 360, 452, 546, 771, 785, 904, 941, 1221, 1472 |
| Hpy8I | GTNNAC | 4 cut(s) | 406, 609, 854, 914 |
| Hpy99I | CGWCG | 1 cut(s) | 1374 |
| HpyAV | CCTTC | 2 cut(s) | 203, 366 |
| HpyCH4III | ACNGT | 3 cut(s) | 262, 535, 1168 |
| HpyCH4V | TGCA | 8 cut(s) | 6, 13, 617, 662, 744, 1096, 1115, 1520 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 120 |
| HpyF3I | CTNAG | 4 cut(s) | 267, 492, 848, 1505 |
| HspAI | GCGC | 1 cut(s) | 192 |
| Kzo9I | GATC | 4 cut(s) | 142, 718, 1177, 1282 |
| LguI | GCTCTTC | 1 cut(s) | 1473 |
| LweI | GCATC | 3 cut(s) | 151, 529, 806 |
| MaeI | CTAG | 3 cut(s) | 146, 557, 941 |
| MaeIII | GTNAC | 3 cut(s) | 36, 529, 1266 |
| MalI | GATC | 4 cut(s) | 144, 720, 1179, 1284 |
| MboI | GATC | 4 cut(s) | 142, 718, 1177, 1282 |
| MfeI | CAATTG | 2 cut(s) | 108, 1397 |
| MflI | RGATCY | 2 cut(s) | 718, 1177 |
| MhlI | GDGCHC | 3 cut(s) | 849, 1162, 1455 |
| MlyI | GAGTC | 3 cut(s) | 724, 902, 1477 |
| MmeI | TCCRAC | 2 cut(s) | 612, 1212 |
| Mph1103I | ATGCAT | 2 cut(s) | 746, 1522 |
| MroXI | GAANNNNTTC | 1 cut(s) | 441 |
| MspR9I | CCNGG | 2 cut(s) | 125, 1005 |
| MunI | CAATTG | 2 cut(s) | 108, 1397 |
| Mva1269I | GAATGC | 1 cut(s) | 598 |
| MvaI | CCWGG | 2 cut(s) | 125, 1005 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 120 |
| NdeI | CATATG | 1 cut(s) | 246 |
| NdeII | GATC | 4 cut(s) | 142, 718, 1177, 1282 |
| NlaIV | GGNNCC | 1 cut(s) | 1376 |
| NmeAIII | GCCGAG | 1 cut(s) | 1369 |
| NmuCI | GTSAC | 1 cut(s) | 36 |
| NsiI | ATGCAT | 2 cut(s) | 746, 1522 |
| NspI | RCATGY | 1 cut(s) | 744 |
| PaqCI | CACCTGC | 1 cut(s) | 970 |
| PciSI | GCTCTTC | 1 cut(s) | 1473 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1487 |
| PctI | GAATGC | 1 cut(s) | 598 |
| PdmI | GAANNNNTTC | 1 cut(s) | 441 |
| PfeI | GAWTC | 4 cut(s) | 186, 448, 458, 1354 |
| PflFI | GACNNNGTC | 1 cut(s) | 1362 |
| PleI | GAGTC | 3 cut(s) | 724, 901, 1477 |
| PpsI | GAGTC | 3 cut(s) | 724, 901, 1477 |
| PshBI | ATTAAT | 1 cut(s) | 278 |
| Psp124BI | GAGCTC | 1 cut(s) | 849 |
| Psp6I | CCWGG | 2 cut(s) | 123, 1003 |
| PspGI | CCWGG | 2 cut(s) | 123, 1003 |
| PspN4I | GGNNCC | 1 cut(s) | 1376 |
| PspPI | GGNCC | 3 cut(s) | 31, 121, 707 |
| PsuI | RGATCY | 2 cut(s) | 718, 1177 |
| PsyI | GACNNNGTC | 1 cut(s) | 1362 |
| RsaI | GTAC | 3 cut(s) | 76, 1132, 1407 |
| RsaNI | GTAC | 3 cut(s) | 75, 1131, 1406 |
| SacI | GAGCTC | 1 cut(s) | 849 |
| SapI | GCTCTTC | 1 cut(s) | 1473 |
| Sau3AI | GATC | 4 cut(s) | 142, 718, 1177, 1282 |
| Sau96I | GGNCC | 3 cut(s) | 31, 121, 707 |
| SchI | GAGTC | 3 cut(s) | 724, 902, 1477 |
| ScrFI | CCNGG | 2 cut(s) | 125, 1005 |
| SduI | GDGCHC | 3 cut(s) | 849, 1162, 1455 |
| SfaNI | GCATC | 3 cut(s) | 151, 529, 806 |
| SinI | GGWCC | 1 cut(s) | 707 |
| SspMI | CTAG | 3 cut(s) | 146, 557, 941 |
| SstI | GAGCTC | 1 cut(s) | 849 |
| StyD4I | CCNGG | 2 cut(s) | 123, 1003 |
| StyI | CCWWGG | 1 cut(s) | 581 |
| TaaI | ACNGT | 3 cut(s) | 262, 535, 1168 |
| TaqI | TCGA | 3 cut(s) | 728, 772, 1357 |
| TatI | WGTACW | 1 cut(s) | 1405 |
| TfiI | GAWTC | 4 cut(s) | 186, 448, 458, 1354 |
| TscAI | CASTG | 1 cut(s) | 415 |
| TseFI | GTSAC | 1 cut(s) | 36 |
| Tsp45I | GTSAC | 1 cut(s) | 36 |
| TspDTI | ATGAA | 9 cut(s) | 263, 318, 690, 750, 761, 831, 1092, 1318, 1437 |
| TspRI | CASTG | 1 cut(s) | 415 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1362 |
| VpaK11BI | GGWCC | 1 cut(s) | 707 |
| VspI | ATTAAT | 1 cut(s) | 278 |
| XapI | RAATTY | 3 cut(s) | 68, 649, 1080 |
| XbaI | TCTAGA | 1 cut(s) | 940 |
| XceI | RCATGY | 1 cut(s) | 744 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 974 |
| XmnI | GAANNNNTTC | 1 cut(s) | 441 |
| XspI | CTAG | 3 cut(s) | 146, 557, 941 |
| Zsp2I | ATGCAT | 2 cut(s) | 746, 1522 |