Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0013945.1

Orthogroup ID

OG0002489

Physical Location & Seq

Genomic Coordinates Reverse (-)

44293 .. 50461

Gene Structure 6169 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0013945.1_g000010.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2577 bp

atgagtagaagtgaagatgttcataaagcaaagctaaggatgcagcaaagtctgtctcatggtggtccgagtcccaagttatccaaaatgttagaagtattgcttgatcatttcaaaacaaaagatccacaaaactcgagggttatgattttctcaaacttcaggggaagtgtcagggagataatggatgcattggcaaacattgggaatttagttaaagctaccgagtttattggtcagagttcagttttagcctgtgaaggatcagagttgaaaggttacaagcggaagctaacaaacagcaagaatgtgagcaaacacatgcgaaatgggggaataaatagcttcaattttcattctagcccgaggatgatccctcacattttcaaacctgaagtccaatatgttgagttttcaattgaacaattcattcgtcctggaaagaaagtcaaagatgataatgatattcagacacctgttactatagacaaattaactgttgctgagactggtttagttgccaagtatttccagtcacatgacataacatggaaaccatctcttatcgcctttcctcacttccaaacctatccctcaagagtgtataaagatgaggtctgttcagaggattgcttaacagttgacactgtcgagcagtgtgacaacagcgaagatttgctgaatcttgatggttcaaagaaacaatcacaggaaataggactggatttcgaactacaaactactgggacattggaaaccaaggagaagcatagcgaccatgatttatctgatgaaaatccttctggtcactcttttctctttggttcagatgttgttgatgttgatgcttctggaaaggtccgtatcatatctgtccctattcttcatggcaaaagtataccaaataccaagtttgcaagtgcaagcagtggtaagttggattgtttgaagcaaagttcttgccatgtaagaacatcagatgaagaacaaacagaagtaactactcgagctggagctaatggggatccagaaatggctcagatagcatatataaggaatgatacaccaacttggtctagattgtgtgactctgaaacctggatggagacaacaatcaatgcggatgaagagaatcctcaaaagccaattctcaaaggaaactttccaaatggagatagtgcttgtgagacgcctgatgttctgaaaagcaaggcaccgacattgctggctgatgaagacgacaaccttttcagagatggtgagcttagtccaaggcttactaatttgatcaaaagtggagttgttccagagtcacctatcaataatagtggaatattagataccataaataagtatgtagttcctgatgctgtttcgcctgcccaattacctacggaactgatatcgaagtcttcaagtcctgggaaaaatggaaaagccactgatatggataccagtgcatgtgaaacaaatgtgtcccgttttcctattgatattgaaattcaatctcccttgcacaataggagtactgccagtataaatgaatctacctccacatcaccggttattgacagaggccaaactgttttagcagaccttacaaacagtagctgtagcaaagattggtgtataggttctggagacaagtcgcagagtgtgaaacagacacgcaagttgaagaggttgcgcaaagttggggatcattggaaaagtaggaatcaggaaagcatgacaaccaatgatgtcccaagagcaaacctgaccagatcttttataagtactactcttcctactaagcatcttagaggtaccaaaatacgtgcaaagaagtcggttaatgatgtgagggaattcatcgacgaggaagctgaggtatcttcagaggatatatctgatgatgaagaagatgaaccagacaactattcaaatgatagtttcatagatgacaggataaattctacggctgcaagtactcaggctgcaaccagtggaattgacatgatggcagtgtacaggcgttcattgctcacccaatcacccatggagaagcagccaagcagttcagccacattttctcccaattctgtggcaatgataactaggacaccggaaactggaagttctggtggaaaaacatctttctctcttcagactcctcaaagcgactctacaaatctgccaattggaatagattcaaagtctttccataagaattggaactctgaagccagaacttttacaactgttgtttctccaggatatgaaagagatattgaaagtcgaaaaagaaaatcgagttttcatcattcaagatctgttcctgctgtcaacttggagctagaattctcgttgcaatcagaggctgcaggcagaaatatgcagcacagtgatgcacatggggacatgctttatgatgatcagttttatgagggtcttgatcttgacgcattggaagcacaagctacaattcttcttaagcagaaatcagaattgccactgcagaagccacagatgagtcagttaaacccagaaaatcctactcttgacagtgctccatcatttgatcttgggatatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000280 GO:0000712 GO:0003674 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006281 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007127 GO:0007131 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0016043 GO:0022402 GO:0022414 GO:0031297 GO:0031974 GO:0031981 GO:0032991 GO:0033554 GO:0034641 GO:0034645 GO:0035825 GO:0036297 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043240 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045005 GO:0045132 GO:0046483 GO:0048285 GO:0050896 GO:0051304 GO:0051307 GO:0051321 GO:0051716 GO:0061982 GO:0070013 GO:0071704 GO:0071821 GO:0071840 GO:0090304 GO:0098813 GO:0140013 GO:1901360 GO:1901576 GO:1903046

KEGG Pathways

Metabolic & Signaling

ko03460 map03460

Pfam Domains

Protein Families

Helicase_C ResIII

Protein Analysis

858

Amino Acids

94.82

Weight (kDa)

5.37

Isoelectric Point (pI)

50.53

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002489)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G35530 AT1G35530 AT1G35530 AT1G35530 AT1G35530 AT1G36020
fragaria_vesca	FvH4_7g03750
malus_domestica	MD15G1404400.v1.1
prunus_persica	Prupe.1G551100_v2.0.a1 Prupe.2G019600_v2.0.a1 Prupe.2G019700_v2.0.a1
pyrus_communis	pycom15g36170 pycom15g36180
rosa_chinensis	RchiOBHm_Chr7g0228871 RchiOBHm_Chr7g0228881 RchiOBHm_Chr7g0228951
rosa_laevigata	RLG00000001539 RLG00000002150 RLG00000022432
rosa_multiflora	Rmu_sc0000721.1_g000006 Rmu_sc0004517.1_g000001 Rmu_sc0005913.1_g000001 Rmu_sc0005913.1_g000026 Rmu_sc0011218.1_g000006 Rmu_sc0013945.1_g000010
rosa_roxburghii	Rroxscaffold_3G00230830 Rroxscaffold_3G00238230
rosa_rugosa	Rorug07G0252600 Rorug07G0254200
rosa_samantha	Rh7AG405800 Rh7BG333000 Rh7BG385100 Rh7BG385200 Rh7BG385300 Rh7CG423400 Rh7DG341000 Rh7DG399800 Rh7DG399900
rosa_wichuraiana	Rw7G033620 Rw7G033650 Rw7G033670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1775
Acc16I	TGCGCA	1 cut(s)	1688
Acc65I	GGTACC	1 cut(s)	1808
AccB1I	GGYRCC	2 cut(s)	1213, 1808
AccI	GTMKAC	1 cut(s)	898
AciI	CCGC	2 cut(s)	286, 1121
AclWI	GGATC	6 cut(s)	119, 271, 367, 1019, 1032, 1707
AcsI	RAATTY	5 cut(s)	208, 1500, 1850, 1954, 2342
AcuI	CTGAAG	5 cut(s)	145, 414, 1863, 2132, 2244
AcyI	GRCGYC	1 cut(s)	1190
AfaI	GTAC	5 cut(s)	1528, 1780, 1810, 1972, 2012
AfiI	CCNNNNNNNGG	1 cut(s)	2114
AflII	CTTAAG	1 cut(s)	2474
AgeI	ACCGGT	1 cut(s)	1561
AjnI	CCWGG	4 cut(s)	436, 1097, 1420, 2254
Alw21I	GWGCWC	1 cut(s)	2554
Alw26I	GTCTC	5 cut(s)	60, 500, 1100, 1181, 1635
AlwI	GGATC	6 cut(s)	119, 271, 367, 1019, 1032, 1707
AlwNI	CAGNNNCTG	2 cut(s)	1611, 2363
Ama87I	CYCGRG	3 cut(s)	136, 364, 1005
AoxI	GGCC	1 cut(s)	1576
ApeKI	GCWGC	6 cut(s)	43, 1964, 1979, 2050, 2363, 2380
ApoI	RAATTY	5 cut(s)	208, 1500, 1850, 1954, 2342
ArsI	GACNNNNNNTTYG	2 cut(s)	381, 413
AsiGI	ACCGGT	1 cut(s)	1561
Asp700I	GAANNNNTTC	2 cut(s)	18, 2191
Asp718I	GGTACC	1 cut(s)	1808
AspLEI	GCGC	1 cut(s)	1689
AspS9I	GGNCC	2 cut(s)	65, 859
AsuHPI	GGTGA	5 cut(s)	1271, 1305, 1551, 2020, 2028
AsuII	TTCGAA	1 cut(s)	729
AvaI	CYCGRG	3 cut(s)	136, 364, 1005
AvaII	GGWCC	2 cut(s)	65, 859
BamHI	GGATCC	1 cut(s)	1024
BanI	GGYRCC	2 cut(s)	1213, 1808
BbsI	GAAGAC	2 cut(s)	1242, 1404
Bbv12I	GWGCWC	1 cut(s)	2554
BbvCI	CCTCAGC	1 cut(s)	1869
BbvI	GCAGC	6 cut(s)	55, 1951, 1966, 2062, 2350, 2392
BccI	CCATC	6 cut(s)	565, 683, 1096, 1250, 1996, 2563
BceAI	ACGGC	1 cut(s)	1977
BcgI	CGANNNNNNTGC	2 cut(s)	1812, 1846
BciT130I	CCWGG	4 cut(s)	438, 1099, 1422, 2256
BciVI	GTATCC	1 cut(s)	1444
BclI	TGATCA	3 cut(s)	106, 1287, 2416
BcoDI	GTCTC	5 cut(s)	60, 500, 1100, 1181, 1635
BfaI	CTAG	4 cut(s)	360, 1077, 2100, 2339
BfmI	CTRYAG	4 cut(s)	483, 1612, 2364, 2498
BfrI	CTTAAG	1 cut(s)	2474
BfuI	GTATCC	1 cut(s)	1444
BglII	AGATCT	2 cut(s)	1766, 2312
BisI	GCNGC	6 cut(s)	44, 1965, 1980, 2051, 2364, 2381
BlsI	GCNGC	6 cut(s)	45, 1966, 1981, 2052, 2365, 2382
BmcAI	AGTACT	3 cut(s)	1528, 1780, 1972
Bme1390I	CCNGG	4 cut(s)	438, 1099, 1422, 2256
Bme18I	GGWCC	2 cut(s)	65, 859
BmeT110I	CYCGRG	3 cut(s)	136, 364, 1005
BmgT120I	GGNCC	2 cut(s)	65, 859
BmiI	GGNNCC	3 cut(s)	1026, 1215, 1810
BmrFI	CCNGG	4 cut(s)	438, 1099, 1422, 2256
BmrI	ACTGGG	1 cut(s)	753
BmsI	GCATC	6 cut(s)	30, 178, 835, 1357, 1807, 2380
BmuI	ACTGGG	1 cut(s)	753
BpiI	GAAGAC	2 cut(s)	1242, 1404
BpmI	CTGGAG	3 cut(s)	1032, 1659, 2238
Bpu10I	CCTNAGC	2 cut(s)	35, 1869
Bpu14I	TTCGAA	1 cut(s)	729
BpuEI	CTTGAG	1 cut(s)	580
BsaAI	YACGTR	1 cut(s)	1820
BsaBI	GATNNNNATC	1 cut(s)	795
BsaHI	GRCGYC	1 cut(s)	1190
BsaJI	CCNNGG	5 cut(s)	365, 759, 1271, 1421, 2040
BsaWI	WCCGGW	2 cut(s)	1561, 2107
BsaXI	ACNNNNNCTCC	2 cut(s)	2059, 2089
Bsc4I	CCNNNNNNNGG	1 cut(s)	2114
Bse118I	RCCGGY	1 cut(s)	1561
Bse1I	ACTGG	8 cut(s)	514, 532, 726, 748, 1455, 1533, 1986, 2119
Bse3DI	GCAATG	3 cut(s)	1220, 2021, 2097
Bse8I	GATNNNNATC	1 cut(s)	795
BseBI	CCWGG	4 cut(s)	438, 1099, 1422, 2256
BseDI	CCNNGG	5 cut(s)	365, 759, 1271, 1421, 2040
BseGI	GGATG	5 cut(s)	45, 193, 375, 1107, 1129
BseJI	GATNNNNATC	1 cut(s)	795
BseLI	CCNNNNNNNGG	1 cut(s)	2114
BseMI	GCAATG	3 cut(s)	1220, 2021, 2097
BseMII	CTCAG	4 cut(s)	495, 1052, 1860, 1988
BseNI	ACTGG	8 cut(s)	514, 532, 726, 748, 1455, 1533, 1986, 2119
BseRI	GAGGAG	1 cut(s)	2145
BseXI	GCAGC	6 cut(s)	55, 1951, 1966, 2062, 2350, 2392
BshFI	GGCC	1 cut(s)	1578
BshNI	GGYRCC	2 cut(s)	1213, 1808
BshTI	ACCGGT	1 cut(s)	1561
BsiHKAI	GWGCWC	1 cut(s)	2554
BsiHKCI	CYCGRG	3 cut(s)	136, 364, 1005
BsiSI	CCGG	2 cut(s)	1562, 2108
BslFI	GGGAC	6 cut(s)	57, 760, 860, 1462, 1730, 2414
BslI	CCNNNNNNNGG	1 cut(s)	2114
BsmAI	GTCTC	5 cut(s)	60, 500, 1100, 1181, 1635
BsmBI	CGTCTC	1 cut(s)	1181
BsmFI	GGGAC	6 cut(s)	57, 760, 860, 1462, 1730, 2414
BsnI	GGCC	1 cut(s)	1578
BsoBI	CYCGRG	3 cut(s)	136, 364, 1005
Bsp119I	TTCGAA	1 cut(s)	729
Bsp1286I	GDGCHC	1 cut(s)	2554
Bsp1407I	TGTACA	1 cut(s)	2010
Bsp19I	CCATGG	1 cut(s)	2040
BspACI	CCGC	2 cut(s)	286, 1121
BspANI	GGCC	1 cut(s)	1578
BspCNI	CTCAG	4 cut(s)	496, 1051, 1861, 1987
BspLI	GGNNCC	3 cut(s)	1026, 1215, 1810
BspMAI	CTGCAG	2 cut(s)	2368, 2502
BspPI	GGATC	6 cut(s)	119, 271, 367, 1019, 1032, 1707
BspT104I	TTCGAA	1 cut(s)	729
BspT107I	GGYRCC	2 cut(s)	1213, 1808
BspTI	CTTAAG	1 cut(s)	2474
BsrDI	GCAATG	3 cut(s)	1220, 2021, 2097
BsrFI	RCCGGY	1 cut(s)	1561
BsrGI	TGTACA	1 cut(s)	2010
BsrI	ACTGG	8 cut(s)	514, 532, 726, 748, 1455, 1533, 1986, 2119
BssAI	RCCGGY	1 cut(s)	1561
BssECI	CCNNGG	5 cut(s)	365, 759, 1271, 1421, 2040
BssNAI	GTATAC	1 cut(s)	899
BssNI	GRCGYC	1 cut(s)	1190
BssT1I	CCWWGG	3 cut(s)	759, 1271, 2040
Bst1107I	GTATAC	1 cut(s)	899
Bst2UI	CCWGG	4 cut(s)	438, 1099, 1422, 2256
Bst4CI	ACNGT	8 cut(s)	499, 640, 649, 1585, 1607, 2245, 2387, 2549
Bst6I	CTCTTC	4 cut(s)	1122, 1673, 1791, 2151
BstACI	GRCGYC	1 cut(s)	1190
BstAFI	CTTAAG	1 cut(s)	2474
BstAUI	TGTACA	1 cut(s)	2010
BstBAI	YACGTR	1 cut(s)	1820
BstBI	TTCGAA	1 cut(s)	729
BstC8I	GCNNGC	4 cut(s)	925, 1227, 1380, 2368
BstDEI	CTNAG	8 cut(s)	35, 504, 1038, 1265, 1794, 1802, 1869, 1974
BstDSI	CCRYGG	1 cut(s)	2040
BstF5I	GGATG	5 cut(s)	45, 193, 375, 1107, 1129
BstHHI	GCGC	1 cut(s)	1689
BstMAI	GTCTC	5 cut(s)	60, 500, 1100, 1181, 1635
BstMWI	GCNNNNNNNGC	4 cut(s)	40, 1043, 2023, 2453
BstNI	CCWGG	4 cut(s)	438, 1099, 1422, 2256
BstNSI	RCATGY	3 cut(s)	325, 1464, 2407
BstSCI	CCNGG	4 cut(s)	436, 1097, 1420, 2254
BstSFI	CTRYAG	4 cut(s)	483, 1612, 2364, 2498
BstV1I	GCAGC	6 cut(s)	55, 1951, 1966, 2062, 2350, 2392
BstV2I	GAAGAC	2 cut(s)	1242, 1404
BstX2I	RGATCY	4 cut(s)	124, 1024, 1766, 2312
BstXI	CCANNNNNNTGG	2 cut(s)	1447, 2086
BstYI	RGATCY	4 cut(s)	124, 1024, 1766, 2312
BstZ17I	GTATAC	1 cut(s)	899
BsuI	GTATCC	1 cut(s)	1444
BsuRI	GGCC	1 cut(s)	1578
BtgI	CCRYGG	1 cut(s)	2040
BtsCI	GGATG	5 cut(s)	45, 193, 375, 1107, 1129
BtsI	GCAGTG	4 cut(s)	662, 934, 2013, 2495
Cac8I	GCNNGC	4 cut(s)	925, 1227, 1380, 2368
CaiI	CAGNNNCTG	2 cut(s)	1611, 2363
CfoI	GCGC	1 cut(s)	1689
Cfr10I	RCCGGY	1 cut(s)	1561
Cfr13I	GGNCC	2 cut(s)	65, 859
CseI	GACGC	2 cut(s)	1198, 2453
Csp6I	GTAC	5 cut(s)	1527, 1779, 1809, 1971, 2011
CspAI	ACCGGT	1 cut(s)	1561
CspCI	CAANNNNNGTGG	2 cut(s)	1309, 1344
CviQI	GTAC	5 cut(s)	1527, 1779, 1809, 1971, 2011
DdeI	CTNAG	8 cut(s)	35, 504, 1038, 1265, 1794, 1802, 1869, 1974
Eam1104I	CTCTTC	4 cut(s)	1122, 1673, 1791, 2151
EarI	CTCTTC	4 cut(s)	1122, 1673, 1791, 2151
Eco130I	CCWWGG	3 cut(s)	759, 1271, 2040
Eco32I	GATATC	1 cut(s)	1404
Eco47I	GGWCC	2 cut(s)	65, 859
Eco57I	CTGAAG	5 cut(s)	145, 414, 1863, 2132, 2244
Eco88I	CYCGRG	3 cut(s)	136, 364, 1005
EcoRI	GAATTC	2 cut(s)	1850, 2342
EcoRII	CCWGG	4 cut(s)	436, 1097, 1420, 2254
EcoRV	GATATC	1 cut(s)	1404
EcoT14I	CCWWGG	3 cut(s)	759, 1271, 2040
EcoT22I	ATGCAT	1 cut(s)	193
ErhI	CCWWGG	3 cut(s)	759, 1271, 2040
Esp3I	CGTCTC	1 cut(s)	1181
FalI	AAGNNNNNCTT	2 cut(s)	87, 119
FaqI	GGGAC	6 cut(s)	57, 760, 860, 1462, 1730, 2414
FbaI	TGATCA	3 cut(s)	106, 1287, 2416
FblI	GTMKAC	1 cut(s)	898
Fnu4HI	GCNGC	6 cut(s)	44, 1965, 1980, 2051, 2364, 2381
FokI	GGATG	5 cut(s)	52, 200, 382, 1114, 1136
Fsp4HI	GCNGC	6 cut(s)	44, 1965, 1980, 2051, 2364, 2381
FspBI	CTAG	4 cut(s)	360, 1077, 2100, 2339
FspI	TGCGCA	1 cut(s)	1688
GlaI	GCGC	1 cut(s)	1688
GluI	GCNGC	6 cut(s)	44, 1965, 1980, 2051, 2364, 2381
GsuI	CTGGAG	3 cut(s)	1032, 1659, 2238
HaeIII	GGCC	1 cut(s)	1578
HapII	CCGG	2 cut(s)	1562, 2108
HgaI	GACGC	2 cut(s)	1198, 2453
HhaI	GCGC	1 cut(s)	1689
Hin1I	GRCGYC	1 cut(s)	1190
Hin6I	GCGC	1 cut(s)	1687
HinP1I	GCGC	1 cut(s)	1687
HincII	GTYRAC	2 cut(s)	643, 2329
HindII	GTYRAC	2 cut(s)	643, 2329
HpaII	CCGG	2 cut(s)	1562, 2108
HphI	GGTGA	5 cut(s)	1271, 1305, 1551, 2020, 2028
Hpy166II	GTNNAC	4 cut(s)	643, 899, 2011, 2329
Hpy8I	GTNNAC	4 cut(s)	643, 899, 2011, 2329
Hpy99I	CGWCG	1 cut(s)	1862
HpyAV	CCTTC	2 cut(s)	254, 810
HpyCH4III	ACNGT	8 cut(s)	499, 640, 649, 1585, 1607, 2245, 2387, 2549
HpyCH4IV	ACGT	1 cut(s)	1819
HpyF10VI	GCNNNNNNNGC	4 cut(s)	40, 1043, 2023, 2453
HpyF3I	CTNAG	8 cut(s)	35, 504, 1038, 1265, 1794, 1802, 1869, 1974
HpySE526I	ACGT	1 cut(s)	1819
Hsp92I	GRCGYC	1 cut(s)	1190
HspAI	GCGC	1 cut(s)	1687
KpnI	GGTACC	1 cut(s)	1812
Ksp22I	TGATCA	3 cut(s)	106, 1287, 2416
LmnI	GCTCC	3 cut(s)	1013, 2335, 2557
Lsp1109I	GCAGC	6 cut(s)	55, 1951, 1966, 2062, 2350, 2392
LweI	GCATC	6 cut(s)	30, 178, 835, 1357, 1807, 2380
MaeI	CTAG	4 cut(s)	360, 1077, 2100, 2339
MaeII	ACGT	1 cut(s)	1819
MaeIII	GTNAC	8 cut(s)	278, 478, 534, 659, 806, 997, 1085, 1311
MfeI	CAATTG	2 cut(s)	417, 2181
MflI	RGATCY	4 cut(s)	124, 1024, 1766, 2312
MhlI	GDGCHC	1 cut(s)	2554
MlyI	GAGTC	6 cut(s)	79, 1082, 1319, 2146, 2159, 2524
MmeI	TCCRAC	1 cut(s)	918
Mph1103I	ATGCAT	1 cut(s)	193
MroXI	GAANNNNTTC	2 cut(s)	18, 2191
MseI	TTAA	6 cut(s)	216, 494, 635, 1836, 2475, 2522
MslI	CAYNNNNRTG	2 cut(s)	1445, 2388
MspCI	CTTAAG	1 cut(s)	2474
MspI	CCGG	2 cut(s)	1562, 2108
MspR9I	CCNGG	4 cut(s)	438, 1099, 1422, 2256
MunI	CAATTG	2 cut(s)	417, 2181
MvaI	CCWGG	4 cut(s)	438, 1099, 1422, 2256
MwoI	GCNNNNNNNGC	4 cut(s)	40, 1043, 2023, 2453
NcoI	CCATGG	1 cut(s)	2040
NlaIV	GGNNCC	3 cut(s)	1026, 1215, 1810
NmuCI	GTSAC	5 cut(s)	534, 659, 806, 1085, 1311
NsbI	TGCGCA	1 cut(s)	1688
NsiI	ATGCAT	1 cut(s)	193
NspI	RCATGY	3 cut(s)	325, 1464, 2407
NspV	TTCGAA	1 cut(s)	729
PaeR7I	CTCGAG	2 cut(s)	136, 1005
PdmI	GAANNNNTTC	2 cut(s)	18, 2191
PfeI	GAWTC	5 cut(s)	682, 1132, 1544, 1717, 2192
PflFI	GACNNNGTC	1 cut(s)	647
PfoI	TCCNGGA	2 cut(s)	436, 2254
PinAI	ACCGGT	1 cut(s)	1561
PkrI	GCNGC	6 cut(s)	45, 1966, 1981, 2052, 2365, 2382
PleI	GAGTC	6 cut(s)	78, 1082, 1318, 2146, 2159, 2523
PpsI	GAGTC	6 cut(s)	78, 1082, 1318, 2146, 2159, 2523
Ppu21I	YACGTR	1 cut(s)	1820
PsiI	TTATAA	1 cut(s)	1775
Psp6I	CCWGG	4 cut(s)	436, 1097, 1420, 2254
PspGI	CCWGG	4 cut(s)	436, 1097, 1420, 2254
PspN4I	GGNNCC	3 cut(s)	1026, 1215, 1810
PspPI	GGNCC	2 cut(s)	65, 859
PspXI	VCTCGAGB	2 cut(s)	136, 1005
PstI	CTGCAG	2 cut(s)	2368, 2502
PstNI	CAGNNNCTG	2 cut(s)	1611, 2363
PsuI	RGATCY	4 cut(s)	124, 1024, 1766, 2312
PsyI	GACNNNGTC	1 cut(s)	647
RsaI	GTAC	5 cut(s)	1528, 1780, 1810, 1972, 2012
RsaNI	GTAC	5 cut(s)	1527, 1779, 1809, 1971, 2011
RseI	CAYNNNNRTG	2 cut(s)	1445, 2388
SaqAI	TTAA	6 cut(s)	216, 494, 635, 1836, 2475, 2522
SatI	GCNGC	6 cut(s)	44, 1965, 1980, 2051, 2364, 2381
Sau96I	GGNCC	2 cut(s)	65, 859
ScaI	AGTACT	3 cut(s)	1528, 1780, 1972
SchI	GAGTC	6 cut(s)	79, 1082, 1319, 2146, 2159, 2524
ScrFI	CCNGG	4 cut(s)	438, 1099, 1422, 2256
SduI	GDGCHC	1 cut(s)	2554
SfaNI	GCATC	6 cut(s)	30, 178, 835, 1357, 1807, 2380
SfcI	CTRYAG	4 cut(s)	483, 1612, 2364, 2498
Sfr274I	CTCGAG	2 cut(s)	136, 1005
SfuI	TTCGAA	1 cut(s)	729
SinI	GGWCC	2 cut(s)	65, 859
SlaI	CTCGAG	2 cut(s)	136, 1005
SmiMI	CAYNNNNRTG	2 cut(s)	1445, 2388
SmlI	CTYRAG	4 cut(s)	136, 595, 1005, 2474
SmoI	CTYRAG	4 cut(s)	136, 595, 1005, 2474
SsiI	CCGC	2 cut(s)	286, 1121
SspI	AATATT	1 cut(s)	1335
SspMI	CTAG	4 cut(s)	360, 1077, 2100, 2339
StyD4I	CCNGG	4 cut(s)	436, 1097, 1420, 2254
StyI	CCWWGG	3 cut(s)	759, 1271, 2040
TaaI	ACNGT	8 cut(s)	499, 640, 649, 1585, 1607, 2245, 2387, 2549
TaiI	ACGT	1 cut(s)	1822
TaqI	TCGA	8 cut(s)	137, 651, 729, 1006, 1406, 1857, 2281, 2294
TatI	WGTACW	4 cut(s)	1526, 1778, 1970, 2010
TfiI	GAWTC	5 cut(s)	682, 1132, 1544, 1717, 2192
Tru1I	TTAA	6 cut(s)	216, 494, 635, 1836, 2475, 2522
Tru9I	TTAA	6 cut(s)	216, 494, 635, 1836, 2475, 2522
TseFI	GTSAC	5 cut(s)	534, 659, 806, 1085, 1311
TseI	GCWGC	6 cut(s)	43, 1964, 1979, 2050, 2363, 2380
Tsp45I	GTSAC	5 cut(s)	534, 659, 806, 1085, 1311
TspGWI	ACGGA	2 cut(s)	851, 1409
Tth111I	GACNNNGTC	1 cut(s)	647
Vha464I	CTTAAG	1 cut(s)	2474
VpaK11BI	GGWCC	2 cut(s)	65, 859
XapI	RAATTY	5 cut(s)	208, 1500, 1850, 1954, 2342
XbaI	TCTAGA	1 cut(s)	1076
XceI	RCATGY	3 cut(s)	325, 1464, 2407
XhoI	CTCGAG	2 cut(s)	136, 1005
XmiI	GTMKAC	1 cut(s)	898
XmnI	GAANNNNTTC	2 cut(s)	18, 2191
XspI	CTAG	4 cut(s)	360, 1077, 2100, 2339
ZrmI	AGTACT	3 cut(s)	1528, 1780, 1972
Zsp2I	ATGCAT	1 cut(s)	193

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.