Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0002489

Physical Location & Seq

Genomic Coordinates Reverse (-)

52159637 .. 52163791

Gene Structure 4155 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ20501

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2352 bp

ATGCGAAATGGGGGAATAAATAGCTTCAATTTTCATTCTAGCCCGAGGATGATCCCTCACATTTTCAAACCTGAAGTCCAATATGTTGAGTTTTCAATTGAACAATTCATTCGTCCTGGAAAGAAAGTCAAAGATGATAATGATATTCAGACACCTGTTACTATAGACAAATTAACTGTTGCTGAGACTGGTTTAGTTGCCAAGTATTTCCAGTCACATGACGTAACATGGAAACCATCTCTTATTGCCTTTCCTCACTTCCAAACCTATCCCTCAAGAGTGTATAAAGTAATGCACTCACCTCGAACAACAATGCTAATTGATACAATGCAATCTTTGCAAGGATTATCCTTTTCTAGTGACAGAAAAATTTCCCTCATCGAGGATGAGGTCTGTTCAGAGGATTGCTTAACAGTTGACACTGTCGAGCAGTGTGACAACAGAGAAGATTTGCTGAATCTTGATGGTTCAAAGAAACAATCACAGGAAATAGGACTGGATTTCGAACTACAAACTACTGGGACATTGGAAACCAAGGAGAAGCATAGCGACCATGATTTATCTGATGAAAATCCTTCTGGTCACTCTTTTCTCTTTGGTTCAGATGTTGTTGATGTTGATGCTTCTGGAAAGGTCCGTATCATATCTGTCCCTATTCTTCATGGCAAAAGTATACCAAATACCAAGTTTGCAAGTGCAAGCAGTGGTAAGTTGGATCGTTTGAAGCAAAGTTCTTGCCATGTAAGAACATCAGATGAAGAACAAACAGAAGTAACTACTCGAGCTGGAGCTAATGGGGATCCAGAAATGGCTCAGATAGCATATATAAGGAATGATACACCAACTTGGTCTAGATTGTGCGACTCTGAAACCTGGATGGAGACAACAATCAATGCGGATGAAGAGAATCCTCAAAAGCCAATTCTCAAAGGAAACTTTCCAAATGGAGATAGTGCTTGTGAGACGCCTGATGTTCTGAAAAGCAAGGCACCAACATTGCTGGCTGATGAAGACGACAACCTTTTCAGAGATGGTGAGCTTAGTCCAAGGCTTACTAATTTGATCAAAAGTGGAGTTGTTCCAGAGTCACCTATCAATAATAGTGGAATATTAGATACCATAAATAAGTATGTAGTTCCTGATGCTGTTTCGCCTGCCCAATTACCTACGGAACTGATATCAAAGTCTTCAAGTCCTGGGAAAAATGGAAAAGCCACTGATATGGATACCAGTGCATGTGAAACAAATGTGTCCCTTTTTCCTACTGATATTGAAATTCAATCTCCCTTGCACAATAGGAGTACTGCCAGTATAAATGAATCTACCTCCACATCACCGGTTATTGACAGAGGCCAAACTGTTTTAGCAGACCTTACAAACAGTAGCTGTAGCAAAGATTGGTGTATAGGTTCTGGAGACAAGTCGCAGAGTGTGAAACAGACACGCAAGTTGAAGAGGTTGCGCAAAGTTGGGGATCATTGGAAAAGTAGGAATCAGGAAAGCATGACAACCAATGATGTCCCAAGAGCAAACCTGACCAGATCTTTTATAAGTACTACTCTTCCTACTAAGCATCTTAGAGGTACCAAAATACGTGCAAAGAAGTCGGTTAATGATGTGAGGGAATTCATCGACGAGGAAGCTGAGGTATCTTCAGAGGATATATCTGATGATGAAGAAGATGAACCAGACAACTATTCAAATGATAGTTTCATAGATGACAGGATAAATTCTACGGCTGCAAGTACTCAGGCTGCAACCAGTGGAATTGACATGATGGCAGTGTACAGGCGTTCATTGCTCACCCAATCACCCATGGAGAAGCAGCCAAGCAGTTCAGCCACATTTTCTCCCAATTCTGTGGCAACGATAACTAGGACACCGGAAACTGGAAGTTCTGGTGGAAAAACATCTTTCTCTCTTCAGACTCCTCAAAGCGACTCTACAAATCTGCCAATTGGAATAGATTCAAAGTCTTTCCATAAGAATTGGAACTCTGAAGCCAGAACTTTTACAACTGACAATTCTCCAGGATATGAAAGAGATATTGAAAGTCGAAAAAGAAAATCGAGTTTTCATCATTCAAGATCTGTTCCTGCTGTCAACTTGGAGCTAGAATTCTCGTTGCAATCAGAGGCTGCAGGTAGAAATATGCAGCACAGTGATGCACATGGGGACATGCTTTATGATGATCAGTTTTATGAGGGTCTTGATCTTGACGCATTGGAAGCACAAGCTACAATTCTTCTTAAGCAGAAATCAGAATTGCCACTGCAGAAGCCACAGATGAGTCAGTTAAACCCAGAAAATCCTACTCTCGACTGTGCTCCATCATTTGATCTTGGGATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000280 GO:0000712 GO:0003674 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006281 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007127 GO:0007131 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0016043 GO:0022402 GO:0022414 GO:0031297 GO:0031974 GO:0031981 GO:0032991 GO:0033554 GO:0034641 GO:0034645 GO:0035825 GO:0036297 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043240 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045005 GO:0045132 GO:0046483 GO:0048285 GO:0050896 GO:0051304 GO:0051307 GO:0051321 GO:0051716 GO:0061982 GO:0070013 GO:0071704 GO:0071821 GO:0071840 GO:0090304 GO:0098813 GO:0140013 GO:1901360 GO:1901576 GO:1903046

KEGG Pathways

Metabolic & Signaling

ko03460 map03460

Pfam Domains

Protein Families

Helicase_C ResIII

Protein Analysis

783

Amino Acids

86.57

Weight (kDa)

5.01

Isoelectric Point (pI)

49.52

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002489)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G35530 AT1G35530 AT1G35530 AT1G35530 AT1G35530 AT1G36020
fragaria_vesca	FvH4_7g03750
malus_domestica	MD15G1404400.v1.1
prunus_persica	Prupe.1G551100_v2.0.a1 Prupe.2G019600_v2.0.a1 Prupe.2G019700_v2.0.a1
pyrus_communis	pycom15g36170 pycom15g36180
rosa_chinensis	RchiOBHm_Chr7g0228871 RchiOBHm_Chr7g0228881 RchiOBHm_Chr7g0228951
rosa_laevigata	RLG00000001539 RLG00000002150 RLG00000022432
rosa_multiflora	Rmu_sc0000721.1_g000006 Rmu_sc0004517.1_g000001 Rmu_sc0005913.1_g000001 Rmu_sc0005913.1_g000026 Rmu_sc0011218.1_g000006 Rmu_sc0013945.1_g000010
rosa_roxburghii	Rroxscaffold_3G00230830 Rroxscaffold_3G00238230
rosa_rugosa	Rorug07G0252600 Rorug07G0254200
rosa_samantha	Rh7AG405800 Rh7BG333000 Rh7BG385100 Rh7BG385200 Rh7BG385300 Rh7CG423400 Rh7DG341000 Rh7DG399800 Rh7DG399900
rosa_wichuraiana	Rw7G033620 Rw7G033650 Rw7G033670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1550
Acc16I	TGCGCA	1 cut(s)	1463
Acc36I	ACCTGC	1 cut(s)	2132
Acc65I	GGTACC	1 cut(s)	1583
AccB1I	GGYRCC	2 cut(s)	988, 1583
AccI	GTMKAC	1 cut(s)	673
AciI	CCGC	1 cut(s)	896
AclWI	GGATC	5 cut(s)	46, 723, 794, 807, 1482
AcsI	RAATTY	5 cut(s)	369, 1275, 1625, 1729, 2117
AcuI	CTGAAG	4 cut(s)	93, 1638, 1907, 2019
AcyI	GRCGYC	1 cut(s)	965
AfaI	GTAC	5 cut(s)	1303, 1555, 1585, 1747, 1787
AfiI	CCNNNNNNNGG	2 cut(s)	382, 1889
AflII	CTTAAG	1 cut(s)	2249
AgeI	ACCGGT	1 cut(s)	1336
AjnI	CCWGG	4 cut(s)	115, 872, 1195, 2029
AluBI	AGCT	8 cut(s)	24, 785, 791, 1039, 1386, 1643, 2113, 2237
AluI	AGCT	8 cut(s)	24, 785, 791, 1039, 1386, 1643, 2113, 2237
Alw21I	GWGCWC	1 cut(s)	2329
Alw26I	GTCTC	4 cut(s)	179, 875, 956, 1410
AlwI	GGATC	5 cut(s)	46, 723, 794, 807, 1482
AlwNI	CAGNNNCTG	2 cut(s)	1386, 2138
Ama87I	CYCGRG	2 cut(s)	43, 780
AoxI	GGCC	1 cut(s)	1351
ApeKI	GCWGC	5 cut(s)	1739, 1754, 1825, 2138, 2155
ApoI	RAATTY	5 cut(s)	369, 1275, 1625, 1729, 2117
ArsI	GACNNNNNNTTYG	2 cut(s)	60, 92
AsiGI	ACCGGT	1 cut(s)	1336
Asp700I	GAANNNNTTC	2 cut(s)	370, 1966
Asp718I	GGTACC	1 cut(s)	1583
AspLEI	GCGC	1 cut(s)	1464
AspS9I	GGNCC	1 cut(s)	634
AsuHPI	GGTGA	6 cut(s)	291, 1046, 1080, 1326, 1795, 1803
AsuII	TTCGAA	1 cut(s)	504
AvaI	CYCGRG	2 cut(s)	43, 780
AvaII	GGWCC	1 cut(s)	634
BamHI	GGATCC	1 cut(s)	799
BanI	GGYRCC	2 cut(s)	988, 1583
BbsI	GAAGAC	2 cut(s)	1017, 1179
Bbv12I	GWGCWC	1 cut(s)	2329
BbvCI	CCTCAGC	1 cut(s)	1644
BbvI	GCAGC	5 cut(s)	1726, 1741, 1837, 2125, 2167
BccI	CCATC	6 cut(s)	244, 458, 871, 1025, 1771, 2338
BceAI	ACGGC	1 cut(s)	1752
BcgI	CGANNNNNNTGC	4 cut(s)	284, 318, 1587, 1621
BciT130I	CCWGG	4 cut(s)	117, 874, 1197, 2031
BciVI	GTATCC	1 cut(s)	1219
BclI	TGATCA	2 cut(s)	1062, 2191
BcoDI	GTCTC	4 cut(s)	179, 875, 956, 1410
BfaI	CTAG	5 cut(s)	39, 357, 852, 1875, 2114
BfmI	CTRYAG	4 cut(s)	162, 1387, 2139, 2273
BfrI	CTTAAG	1 cut(s)	2249
BfuAI	ACCTGC	1 cut(s)	2132
BfuI	GTATCC	1 cut(s)	1219
BglII	AGATCT	2 cut(s)	1541, 2087
BisI	GCNGC	5 cut(s)	1740, 1755, 1826, 2139, 2156
BlsI	GCNGC	5 cut(s)	1741, 1756, 1827, 2140, 2157
BmcAI	AGTACT	3 cut(s)	1303, 1555, 1747
Bme1390I	CCNGG	4 cut(s)	117, 874, 1197, 2031
Bme18I	GGWCC	1 cut(s)	634
BmeT110I	CYCGRG	2 cut(s)	43, 780
BmgT120I	GGNCC	1 cut(s)	634
BmiI	GGNNCC	3 cut(s)	801, 990, 1585
BmrFI	CCNGG	4 cut(s)	117, 874, 1197, 2031
BmrI	ACTGGG	1 cut(s)	528
BmsI	GCATC	4 cut(s)	610, 1132, 1582, 2155
BmuI	ACTGGG	1 cut(s)	528
BpiI	GAAGAC	2 cut(s)	1017, 1179
BpmI	CTGGAG	3 cut(s)	807, 1434, 2013
Bpu10I	CCTNAGC	1 cut(s)	1644
Bpu14I	TTCGAA	1 cut(s)	504
BpuEI	CTTGAG	1 cut(s)	259
BsaAI	YACGTR	1 cut(s)	1595
BsaBI	GATNNNNATC	1 cut(s)	570
BsaHI	GRCGYC	1 cut(s)	965
BsaJI	CCNNGG	5 cut(s)	44, 534, 1046, 1196, 1815
BsaWI	WCCGGW	2 cut(s)	1336, 1882
BsaXI	ACNNNNNCTCC	2 cut(s)	1834, 1864
Bsc4I	CCNNNNNNNGG	2 cut(s)	382, 1889
Bse118I	RCCGGY	1 cut(s)	1336
Bse1I	ACTGG	8 cut(s)	193, 211, 501, 523, 1230, 1308, 1761, 1894
Bse3DI	GCAATG	2 cut(s)	995, 1796
Bse8I	GATNNNNATC	1 cut(s)	570
BseBI	CCWGG	4 cut(s)	117, 874, 1197, 2031
BseDI	CCNNGG	5 cut(s)	44, 534, 1046, 1196, 1815
BseGI	GGATG	4 cut(s)	54, 391, 882, 904
BseJI	GATNNNNATC	1 cut(s)	570
BseLI	CCNNNNNNNGG	2 cut(s)	382, 1889
BseMI	GCAATG	2 cut(s)	995, 1796
BseMII	CTCAG	4 cut(s)	174, 827, 1635, 1763
BseNI	ACTGG	8 cut(s)	193, 211, 501, 523, 1230, 1308, 1761, 1894
BseRI	GAGGAG	1 cut(s)	1920
BseXI	GCAGC	5 cut(s)	1726, 1741, 1837, 2125, 2167
BshFI	GGCC	1 cut(s)	1353
BshNI	GGYRCC	2 cut(s)	988, 1583
BshTI	ACCGGT	1 cut(s)	1336
BsiHKAI	GWGCWC	1 cut(s)	2329
BsiHKCI	CYCGRG	2 cut(s)	43, 780
BsiSI	CCGG	2 cut(s)	1337, 1883
BslFI	GGGAC	5 cut(s)	535, 635, 1237, 1505, 2189
BslI	CCNNNNNNNGG	2 cut(s)	382, 1889
BsmAI	GTCTC	4 cut(s)	179, 875, 956, 1410
BsmBI	CGTCTC	1 cut(s)	956
BsmFI	GGGAC	5 cut(s)	535, 635, 1237, 1505, 2189
BsnI	GGCC	1 cut(s)	1353
BsoBI	CYCGRG	2 cut(s)	43, 780
Bsp119I	TTCGAA	1 cut(s)	504
Bsp1286I	GDGCHC	1 cut(s)	2329
Bsp1407I	TGTACA	1 cut(s)	1785
Bsp19I	CCATGG	1 cut(s)	1815
BspACI	CCGC	1 cut(s)	896
BspANI	GGCC	1 cut(s)	1353
BspCNI	CTCAG	4 cut(s)	175, 826, 1636, 1762
BspLI	GGNNCC	3 cut(s)	801, 990, 1585
BspMAI	CTGCAG	2 cut(s)	2143, 2277
BspMI	ACCTGC	1 cut(s)	2132
BspPI	GGATC	5 cut(s)	46, 723, 794, 807, 1482
BspT104I	TTCGAA	1 cut(s)	504
BspT107I	GGYRCC	2 cut(s)	988, 1583
BspTI	CTTAAG	1 cut(s)	2249
BsrDI	GCAATG	2 cut(s)	995, 1796
BsrFI	RCCGGY	1 cut(s)	1336
BsrGI	TGTACA	1 cut(s)	1785
BsrI	ACTGG	8 cut(s)	193, 211, 501, 523, 1230, 1308, 1761, 1894
BssAI	RCCGGY	1 cut(s)	1336
BssECI	CCNNGG	5 cut(s)	44, 534, 1046, 1196, 1815
BssNAI	GTATAC	1 cut(s)	674
BssNI	GRCGYC	1 cut(s)	965
BssT1I	CCWWGG	3 cut(s)	534, 1046, 1815
Bst1107I	GTATAC	1 cut(s)	674
Bst2UI	CCWGG	4 cut(s)	117, 874, 1197, 2031
Bst4CI	ACNGT	7 cut(s)	178, 415, 424, 1360, 1382, 2162, 2324
Bst6I	CTCTTC	4 cut(s)	897, 1448, 1566, 1926
BstACI	GRCGYC	1 cut(s)	965
BstAFI	CTTAAG	1 cut(s)	2249
BstAPI	GCANNNNNTGC	1 cut(s)	337
BstAUI	TGTACA	1 cut(s)	1785
BstBAI	YACGTR	1 cut(s)	1595
BstBI	TTCGAA	1 cut(s)	504
BstC8I	GCNNGC	3 cut(s)	700, 1002, 1155
BstDEI	CTNAG	7 cut(s)	183, 813, 1040, 1569, 1577, 1644, 1749
BstDSI	CCRYGG	1 cut(s)	1815
BstENI	CCTNNNNNAGG	1 cut(s)	380
BstF5I	GGATG	4 cut(s)	54, 391, 882, 904
BstHHI	GCGC	1 cut(s)	1464
BstMAI	GTCTC	4 cut(s)	179, 875, 956, 1410
BstMWI	GCNNNNNNNGC	4 cut(s)	337, 818, 1798, 2228
BstNI	CCWGG	4 cut(s)	117, 874, 1197, 2031
BstNSI	RCATGY	2 cut(s)	1239, 2182
BstSCI	CCNGG	4 cut(s)	115, 872, 1195, 2029
BstSFI	CTRYAG	4 cut(s)	162, 1387, 2139, 2273
BstV1I	GCAGC	5 cut(s)	1726, 1741, 1837, 2125, 2167
BstV2I	GAAGAC	2 cut(s)	1017, 1179
BstX2I	RGATCY	3 cut(s)	799, 1541, 2087
BstXI	CCANNNNNNTGG	2 cut(s)	1222, 1861
BstYI	RGATCY	3 cut(s)	799, 1541, 2087
BstZ17I	GTATAC	1 cut(s)	674
BsuI	GTATCC	1 cut(s)	1219
BsuRI	GGCC	1 cut(s)	1353
BtgI	CCRYGG	1 cut(s)	1815
BtsCI	GGATG	4 cut(s)	54, 391, 882, 904
BtsI	GCAGTG	4 cut(s)	437, 709, 1788, 2270
BtsIMutI	CAGTG	9 cut(s)	420, 437, 709, 1215, 1237, 1768, 1788, 2167, 2270
BveI	ACCTGC	1 cut(s)	2132
Cac8I	GCNNGC	3 cut(s)	700, 1002, 1155
CaiI	CAGNNNCTG	2 cut(s)	1386, 2138
CfoI	GCGC	1 cut(s)	1464
Cfr10I	RCCGGY	1 cut(s)	1336
Cfr13I	GGNCC	1 cut(s)	634
CseI	GACGC	2 cut(s)	973, 2228
Csp6I	GTAC	5 cut(s)	1302, 1554, 1584, 1746, 1786
CspAI	ACCGGT	1 cut(s)	1336
CspCI	CAANNNNNGTGG	2 cut(s)	1084, 1119
CviQI	GTAC	5 cut(s)	1302, 1554, 1584, 1746, 1786
DdeI	CTNAG	7 cut(s)	183, 813, 1040, 1569, 1577, 1644, 1749
Eam1104I	CTCTTC	4 cut(s)	897, 1448, 1566, 1926
EarI	CTCTTC	4 cut(s)	897, 1448, 1566, 1926
Eco130I	CCWWGG	3 cut(s)	534, 1046, 1815
Eco32I	GATATC	1 cut(s)	1179
Eco47I	GGWCC	1 cut(s)	634
Eco57I	CTGAAG	4 cut(s)	93, 1638, 1907, 2019
Eco88I	CYCGRG	2 cut(s)	43, 780
EcoNI	CCTNNNNNAGG	1 cut(s)	380
EcoRI	GAATTC	2 cut(s)	1625, 2117
EcoRII	CCWGG	4 cut(s)	115, 872, 1195, 2029
EcoRV	GATATC	1 cut(s)	1179
EcoT14I	CCWWGG	3 cut(s)	534, 1046, 1815
ErhI	CCWWGG	3 cut(s)	534, 1046, 1815
Esp3I	CGTCTC	1 cut(s)	956
FaqI	GGGAC	5 cut(s)	535, 635, 1237, 1505, 2189
FbaI	TGATCA	2 cut(s)	1062, 2191
FblI	GTMKAC	1 cut(s)	673
Fnu4HI	GCNGC	5 cut(s)	1740, 1755, 1826, 2139, 2156
FokI	GGATG	4 cut(s)	61, 398, 889, 911
Fsp4HI	GCNGC	5 cut(s)	1740, 1755, 1826, 2139, 2156
FspBI	CTAG	5 cut(s)	39, 357, 852, 1875, 2114
FspI	TGCGCA	1 cut(s)	1463
GlaI	GCGC	1 cut(s)	1463
GluI	GCNGC	5 cut(s)	1740, 1755, 1826, 2139, 2156
GsuI	CTGGAG	3 cut(s)	807, 1434, 2013
HaeIII	GGCC	1 cut(s)	1353
HapII	CCGG	2 cut(s)	1337, 1883
HgaI	GACGC	2 cut(s)	973, 2228
HhaI	GCGC	1 cut(s)	1464
Hin1I	GRCGYC	1 cut(s)	965
Hin6I	GCGC	1 cut(s)	1462
HinP1I	GCGC	1 cut(s)	1462
HincII	GTYRAC	2 cut(s)	418, 2104
HindII	GTYRAC	2 cut(s)	418, 2104
HpaII	CCGG	2 cut(s)	1337, 1883
HphI	GGTGA	6 cut(s)	291, 1046, 1080, 1326, 1795, 1803
Hpy166II	GTNNAC	4 cut(s)	418, 674, 1786, 2104
Hpy8I	GTNNAC	4 cut(s)	418, 674, 1786, 2104
Hpy99I	CGWCG	1 cut(s)	1637
HpyAV	CCTTC	1 cut(s)	585
HpyCH4III	ACNGT	7 cut(s)	178, 415, 424, 1360, 1382, 2162, 2324
HpyCH4IV	ACGT	2 cut(s)	222, 1594
HpyF10VI	GCNNNNNNNGC	4 cut(s)	337, 818, 1798, 2228
HpyF3I	CTNAG	7 cut(s)	183, 813, 1040, 1569, 1577, 1644, 1749
HpySE526I	ACGT	2 cut(s)	222, 1594
Hsp92I	GRCGYC	1 cut(s)	965
HspAI	GCGC	1 cut(s)	1462
KpnI	GGTACC	1 cut(s)	1587
Ksp22I	TGATCA	2 cut(s)	1062, 2191
LmnI	GCTCC	3 cut(s)	788, 2110, 2332
Lsp1109I	GCAGC	5 cut(s)	1726, 1741, 1837, 2125, 2167
LweI	GCATC	4 cut(s)	610, 1132, 1582, 2155
MaeI	CTAG	5 cut(s)	39, 357, 852, 1875, 2114
MaeII	ACGT	2 cut(s)	222, 1594
MaeIII	GTNAC	8 cut(s)	157, 213, 223, 359, 434, 581, 772, 1086
MfeI	CAATTG	2 cut(s)	96, 1956
MflI	RGATCY	3 cut(s)	799, 1541, 2087
MhlI	GDGCHC	1 cut(s)	2329
MlyI	GAGTC	5 cut(s)	857, 1094, 1921, 1934, 2299
MmeI	TCCRAC	1 cut(s)	693
MroXI	GAANNNNTTC	2 cut(s)	370, 1966
MseI	TTAA	5 cut(s)	173, 410, 1611, 2250, 2297
MslI	CAYNNNNRTG	2 cut(s)	1220, 2163
MspCI	CTTAAG	1 cut(s)	2249
MspI	CCGG	2 cut(s)	1337, 1883
MspR9I	CCNGG	4 cut(s)	117, 874, 1197, 2031
MunI	CAATTG	2 cut(s)	96, 1956
MvaI	CCWGG	4 cut(s)	117, 874, 1197, 2031
MwoI	GCNNNNNNNGC	4 cut(s)	337, 818, 1798, 2228
NcoI	CCATGG	1 cut(s)	1815
NlaIV	GGNNCC	3 cut(s)	801, 990, 1585
NmuCI	GTSAC	5 cut(s)	213, 359, 434, 581, 1086
NsbI	TGCGCA	1 cut(s)	1463
NspI	RCATGY	2 cut(s)	1239, 2182
NspV	TTCGAA	1 cut(s)	504
PaeR7I	CTCGAG	1 cut(s)	780
PdmI	GAANNNNTTC	2 cut(s)	370, 1966
PfeI	GAWTC	5 cut(s)	457, 907, 1319, 1492, 1967
PflFI	GACNNNGTC	1 cut(s)	422
PfoI	TCCNGGA	2 cut(s)	115, 2029
PinAI	ACCGGT	1 cut(s)	1336
PkrI	GCNGC	5 cut(s)	1741, 1756, 1827, 2140, 2157
PleI	GAGTC	5 cut(s)	857, 1093, 1921, 1934, 2298
PpsI	GAGTC	5 cut(s)	857, 1093, 1921, 1934, 2298
Ppu21I	YACGTR	1 cut(s)	1595
PsiI	TTATAA	1 cut(s)	1550
Psp6I	CCWGG	4 cut(s)	115, 872, 1195, 2029
PspGI	CCWGG	4 cut(s)	115, 872, 1195, 2029
PspN4I	GGNNCC	3 cut(s)	801, 990, 1585
PspPI	GGNCC	1 cut(s)	634
PspXI	VCTCGAGB	1 cut(s)	780
PstI	CTGCAG	2 cut(s)	2143, 2277
PstNI	CAGNNNCTG	2 cut(s)	1386, 2138
PsuI	RGATCY	3 cut(s)	799, 1541, 2087
PsyI	GACNNNGTC	1 cut(s)	422
RsaI	GTAC	5 cut(s)	1303, 1555, 1585, 1747, 1787
RsaNI	GTAC	5 cut(s)	1302, 1554, 1584, 1746, 1786
RseI	CAYNNNNRTG	2 cut(s)	1220, 2163
SaqAI	TTAA	5 cut(s)	173, 410, 1611, 2250, 2297
SatI	GCNGC	5 cut(s)	1740, 1755, 1826, 2139, 2156
Sau96I	GGNCC	1 cut(s)	634
ScaI	AGTACT	3 cut(s)	1303, 1555, 1747
SchI	GAGTC	5 cut(s)	857, 1094, 1921, 1934, 2299
ScrFI	CCNGG	4 cut(s)	117, 874, 1197, 2031
SduI	GDGCHC	1 cut(s)	2329
SfaNI	GCATC	4 cut(s)	610, 1132, 1582, 2155
SfcI	CTRYAG	4 cut(s)	162, 1387, 2139, 2273
Sfr274I	CTCGAG	1 cut(s)	780
SfuI	TTCGAA	1 cut(s)	504
SinI	GGWCC	1 cut(s)	634
SlaI	CTCGAG	1 cut(s)	780
SmiMI	CAYNNNNRTG	2 cut(s)	1220, 2163
SmlI	CTYRAG	3 cut(s)	274, 780, 2249
SmoI	CTYRAG	3 cut(s)	274, 780, 2249
SsiI	CCGC	1 cut(s)	896
SspI	AATATT	1 cut(s)	1110
SspMI	CTAG	5 cut(s)	39, 357, 852, 1875, 2114
StyD4I	CCNGG	4 cut(s)	115, 872, 1195, 2029
StyI	CCWWGG	3 cut(s)	534, 1046, 1815
TaaI	ACNGT	7 cut(s)	178, 415, 424, 1360, 1382, 2162, 2324
TaiI	ACGT	2 cut(s)	225, 1597
TaqI	TCGA	9 cut(s)	304, 381, 426, 504, 781, 1632, 2056, 2069, 2319
TatI	WGTACW	4 cut(s)	1301, 1553, 1745, 1785
TfiI	GAWTC	5 cut(s)	457, 907, 1319, 1492, 1967
Tru1I	TTAA	5 cut(s)	173, 410, 1611, 2250, 2297
Tru9I	TTAA	5 cut(s)	173, 410, 1611, 2250, 2297
TscAI	CASTG	9 cut(s)	427, 437, 709, 1222, 1237, 1768, 1788, 2167, 2277
TseFI	GTSAC	5 cut(s)	213, 359, 434, 581, 1086
TseI	GCWGC	5 cut(s)	1739, 1754, 1825, 2138, 2155
Tsp45I	GTSAC	5 cut(s)	213, 359, 434, 581, 1086
TspGWI	ACGGA	2 cut(s)	626, 1184
TspRI	CASTG	9 cut(s)	427, 437, 709, 1222, 1237, 1768, 1788, 2167, 2277
Tth111I	GACNNNGTC	1 cut(s)	422
Vha464I	CTTAAG	1 cut(s)	2249
VpaK11BI	GGWCC	1 cut(s)	634
XagI	CCTNNNNNAGG	1 cut(s)	380
XapI	RAATTY	5 cut(s)	369, 1275, 1625, 1729, 2117
XbaI	TCTAGA	1 cut(s)	851
XceI	RCATGY	2 cut(s)	1239, 2182
XhoI	CTCGAG	1 cut(s)	780
XmiI	GTMKAC	1 cut(s)	673
XmnI	GAANNNNTTC	2 cut(s)	370, 1966
XspI	CTAG	5 cut(s)	39, 357, 852, 1875, 2114
ZrmI	AGTACT	3 cut(s)	1303, 1555, 1747

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.