U1 small nuclear ribonucleoprotein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G21215 AT3G21215 AT3G21215 AT3G21215 |
| fragaria_vesca | FvH4_3g14953 FvH4_3g16432 FvH4_4g15800 FvH4_4g32761 FvH4_5g34521 FvH4_6g16241 FvH4_6g37450 FvH4_6g45392 FvH4_7g15921 FvH4_7g31684 |
| malus_domestica | MD09G1158000.v1.1 MD17G1144000.v1.1 |
| prunus_persica | Prupe.3G168000_v2.0.a1 |
| pyrus_communis | pycom09g07680 pycom17g13730 |
| rosa_chinensis | RchiOBHm_Chr2g0150271 RchiOBHm_Chr2g0150291 |
| rosa_laevigata | RLG00000020483 |
| rosa_multiflora | Rmu_sc0001169.1_g000003 Rmu_sc0020705.1_g000001 Rmu_sc0024000.1_g000001 Rmu_sc0038093.1_g000001 Rmu_sc0040821.1_g000001 Rmu_ssc0000020.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00097320 Rroxscaffold_2G00097330 |
| rosa_rugosa | Rorug02G0420200 Rorug02G0420300 |
| rosa_samantha | Rh2AG479200 Rh2BG491500 Rh2CG465400 Rh2DG500300 |
| rosa_wichuraiana | Rw2G038980 Rw2G039110 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 569 |
| AccI | GTMKAC | 2 cut(s) | 114, 169 |
| AccIII | TCCGGA | 1 cut(s) | 147 |
| AciI | CCGC | 6 cut(s) | 59, 62, 81, 132, 353, 410 |
| AclWI | GGATC | 3 cut(s) | 10, 23, 554 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AcuI | CTGAAG | 1 cut(s) | 305 |
| AcyI | GRCGYC | 1 cut(s) | 315 |
| AfaI | GTAC | 4 cut(s) | 591, 615, 636, 831 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 12, 50, 518, 569, 865, 866 |
| AgsI | TTSAA | 2 cut(s) | 733, 806 |
| AjnI | CCWGG | 3 cut(s) | 237, 742, 934 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 586, 618 |
| AleI | CACNNNNGTG | 1 cut(s) | 936 |
| AluBI | AGCT | 1 cut(s) | 962 |
| AluI | AGCT | 1 cut(s) | 962 |
| Alw21I | GWGCWC | 1 cut(s) | 964 |
| Alw26I | GTCTC | 1 cut(s) | 763 |
| AlwI | GGATC | 3 cut(s) | 10, 23, 554 |
| Ama87I | CYCGRG | 1 cut(s) | 173 |
| Aor13HI | TCCGGA | 1 cut(s) | 147 |
| AoxI | GGCC | 5 cut(s) | 3, 38, 128, 521, 724 |
| ApeKI | GCWGC | 4 cut(s) | 47, 305, 358, 950 |
| AseI | ATTAAT | 1 cut(s) | 705 |
| AspLEI | GCGC | 1 cut(s) | 11 |
| AspS9I | GGNCC | 6 cut(s) | 53, 129, 145, 150, 521, 724 |
| AsuC2I | CCSGG | 1 cut(s) | 222 |
| AsuHPI | GGTGA | 1 cut(s) | 467 |
| AsuII | TTCGAA | 1 cut(s) | 896 |
| AvaI | CYCGRG | 1 cut(s) | 173 |
| AvaII | GGWCC | 3 cut(s) | 53, 145, 150 |
| BamHI | GGATCC | 1 cut(s) | 15 |
| BanII | GRGCYC | 2 cut(s) | 872, 964 |
| Bbv12I | GWGCWC | 1 cut(s) | 964 |
| BbvI | GCAGC | 4 cut(s) | 59, 292, 345, 937 |
| BccI | CCATC | 3 cut(s) | 364, 493, 917 |
| BciT130I | CCWGG | 3 cut(s) | 239, 744, 936 |
| BclI | TGATCA | 1 cut(s) | 427 |
| BcnI | CCSGG | 1 cut(s) | 222 |
| BcoDI | GTCTC | 1 cut(s) | 763 |
| BfaI | CTAG | 1 cut(s) | 624 |
| BfmI | CTRYAG | 1 cut(s) | 873 |
| BfoI | RGCGCY | 1 cut(s) | 12 |
| BisI | GCNGC | 5 cut(s) | 48, 62, 306, 359, 951 |
| BlpI | GCTNAGC | 1 cut(s) | 291 |
| BlsI | GCNGC | 5 cut(s) | 49, 63, 307, 360, 952 |
| Bme1390I | CCNGG | 4 cut(s) | 222, 239, 744, 936 |
| Bme18I | GGWCC | 3 cut(s) | 53, 145, 150 |
| BmeT110I | CYCGRG | 1 cut(s) | 173 |
| BmgT120I | GGNCC | 6 cut(s) | 53, 129, 145, 150, 521, 724 |
| BmiI | GGNNCC | 5 cut(s) | 17, 522, 540, 725, 929 |
| BmrFI | CCNGG | 4 cut(s) | 222, 239, 744, 936 |
| BmrI | ACTGGG | 1 cut(s) | 855 |
| BmsI | GCATC | 1 cut(s) | 403 |
| BmuI | ACTGGG | 1 cut(s) | 855 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 259, 291 |
| BpmI | CTGGAG | 1 cut(s) | 570 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 291 |
| Bpu14I | TTCGAA | 1 cut(s) | 896 |
| BpuEI | CTTGAG | 1 cut(s) | 787 |
| BpuMI | CCSGG | 1 cut(s) | 222 |
| BsaHI | GRCGYC | 1 cut(s) | 315 |
| BsaJI | CCNNGG | 3 cut(s) | 174, 237, 934 |
| BsaWI | WCCGGW | 2 cut(s) | 70, 147 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 806, 836 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 12, 50, 518, 569, 865, 866 |
| Bse118I | RCCGGY | 4 cut(s) | 5, 50, 126, 967 |
| Bse1I | ACTGG | 4 cut(s) | 454, 587, 861, 982 |
| Bse3DI | GCAATG | 2 cut(s) | 41, 300 |
| BseAI | TCCGGA | 1 cut(s) | 147 |
| BseBI | CCWGG | 3 cut(s) | 239, 744, 936 |
| BseDI | CCNNGG | 3 cut(s) | 174, 237, 934 |
| BseGI | GGATG | 4 cut(s) | 184, 418, 496, 928 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 12, 50, 518, 569, 865, 866 |
| BseMI | GCAATG | 2 cut(s) | 41, 300 |
| BseMII | CTCAG | 2 cut(s) | 305, 710 |
| BseNI | ACTGG | 4 cut(s) | 454, 587, 861, 982 |
| BseRI | GAGGAG | 7 cut(s) | 57, 81, 84, 87, 90, 492, 540 |
| BseXI | GCAGC | 4 cut(s) | 59, 292, 345, 937 |
| BseYI | CCCAGC | 1 cut(s) | 11 |
| BsgI | GTGCAG | 1 cut(s) | 344 |
| BshFI | GGCC | 5 cut(s) | 5, 40, 130, 523, 726 |
| BsiHKAI | GWGCWC | 1 cut(s) | 964 |
| BsiHKCI | CYCGRG | 1 cut(s) | 173 |
| BsiSI | CCGG | 8 cut(s) | 6, 44, 51, 71, 127, 148, 221, 968 |
| BslFI | GGGAC | 2 cut(s) | 62, 929 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 12, 50, 518, 569, 865, 866 |
| BsmAI | GTCTC | 1 cut(s) | 763 |
| BsmFI | GGGAC | 2 cut(s) | 62, 929 |
| BsnI | GGCC | 5 cut(s) | 5, 40, 130, 523, 726 |
| BsoBI | CYCGRG | 1 cut(s) | 173 |
| Bsp119I | TTCGAA | 1 cut(s) | 896 |
| Bsp1286I | GDGCHC | 2 cut(s) | 872, 964 |
| Bsp13I | TCCGGA | 1 cut(s) | 147 |
| Bsp1407I | TGTACA | 1 cut(s) | 829 |
| Bsp143I | GATC | 3 cut(s) | 15, 427, 559 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 291 |
| BspACI | CCGC | 6 cut(s) | 59, 62, 81, 132, 353, 410 |
| BspANI | GGCC | 5 cut(s) | 5, 40, 130, 523, 726 |
| BspCNI | CTCAG | 2 cut(s) | 304, 711 |
| BspEI | TCCGGA | 1 cut(s) | 147 |
| BspLI | GGNNCC | 5 cut(s) | 17, 522, 540, 725, 929 |
| BspPI | GGATC | 3 cut(s) | 10, 23, 554 |
| BspT104I | TTCGAA | 1 cut(s) | 896 |
| BsrDI | GCAATG | 2 cut(s) | 41, 300 |
| BsrFI | RCCGGY | 4 cut(s) | 5, 50, 126, 967 |
| BsrGI | TGTACA | 1 cut(s) | 829 |
| BsrI | ACTGG | 4 cut(s) | 454, 587, 861, 982 |
| BssAI | RCCGGY | 4 cut(s) | 5, 50, 126, 967 |
| BssECI | CCNNGG | 3 cut(s) | 174, 237, 934 |
| BssMI | GATC | 3 cut(s) | 15, 427, 559 |
| BssNI | GRCGYC | 1 cut(s) | 315 |
| Bst2UI | CCWGG | 3 cut(s) | 239, 744, 936 |
| Bst4CI | ACNGT | 4 cut(s) | 666, 787, 818, 839 |
| BstACI | GRCGYC | 1 cut(s) | 315 |
| BstAUI | TGTACA | 1 cut(s) | 829 |
| BstBI | TTCGAA | 1 cut(s) | 896 |
| BstC8I | GCNNGC | 4 cut(s) | 7, 132, 297, 468 |
| BstDEI | CTNAG | 2 cut(s) | 291, 719 |
| BstF5I | GGATG | 4 cut(s) | 184, 418, 496, 928 |
| BstH2I | RGCGCY | 1 cut(s) | 12 |
| BstHHI | GCGC | 1 cut(s) | 11 |
| BstKTI | GATC | 3 cut(s) | 18, 430, 562 |
| BstMAI | GTCTC | 1 cut(s) | 763 |
| BstMBI | GATC | 3 cut(s) | 15, 427, 559 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 296, 305, 314, 876, 947, 959, 968 |
| BstNI | CCWGG | 3 cut(s) | 239, 744, 936 |
| BstSCI | CCNGG | 4 cut(s) | 220, 237, 742, 934 |
| BstSFI | CTRYAG | 1 cut(s) | 873 |
| BstV1I | GCAGC | 4 cut(s) | 59, 292, 345, 937 |
| BstX2I | RGATCY | 1 cut(s) | 15 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 516 |
| BstYI | RGATCY | 1 cut(s) | 15 |
| BsuRI | GGCC | 5 cut(s) | 5, 40, 130, 523, 726 |
| BtsCI | GGATG | 4 cut(s) | 184, 418, 496, 928 |
| BtsI | GCAGTG | 1 cut(s) | 285 |
| BtsIMutI | CAGTG | 2 cut(s) | 285, 823 |
| Cac8I | GCNNGC | 4 cut(s) | 7, 132, 297, 468 |
| CfoI | GCGC | 1 cut(s) | 11 |
| Cfr10I | RCCGGY | 4 cut(s) | 5, 50, 126, 967 |
| Cfr13I | GGNCC | 6 cut(s) | 53, 129, 145, 150, 521, 724 |
| CseI | GACGC | 1 cut(s) | 323 |
| Csp6I | GTAC | 4 cut(s) | 590, 614, 635, 830 |
| CviAII | CATG | 2 cut(s) | 527, 880 |
| CviQI | GTAC | 4 cut(s) | 590, 614, 635, 830 |
| DdeI | CTNAG | 2 cut(s) | 291, 719 |
| DpnI | GATC | 3 cut(s) | 17, 429, 561 |
| DpnII | GATC | 3 cut(s) | 15, 427, 559 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| EciI | GGCGGA | 1 cut(s) | 48 |
| Ecl136II | GAGCTC | 1 cut(s) | 962 |
| Eco24I | GRGCYC | 2 cut(s) | 872, 964 |
| Eco47I | GGWCC | 3 cut(s) | 53, 145, 150 |
| Eco53kI | GAGCTC | 1 cut(s) | 962 |
| Eco57I | CTGAAG | 1 cut(s) | 305 |
| Eco88I | CYCGRG | 1 cut(s) | 173 |
| EcoICRI | GAGCTC | 1 cut(s) | 962 |
| EcoO109I | RGGNCCY | 1 cut(s) | 724 |
| EcoRII | CCWGG | 3 cut(s) | 237, 742, 934 |
| EcoT38I | GRGCYC | 2 cut(s) | 872, 964 |
| FaeI | CATG | 2 cut(s) | 530, 883 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 303, 335 |
| FaqI | GGGAC | 2 cut(s) | 62, 929 |
| FatI | CATG | 2 cut(s) | 526, 879 |
| FauI | CCCGC | 2 cut(s) | 88, 139 |
| FauNDI | CATATG | 2 cut(s) | 556, 565 |
| FbaI | TGATCA | 1 cut(s) | 427 |
| FblI | GTMKAC | 2 cut(s) | 114, 169 |
| Fnu4HI | GCNGC | 5 cut(s) | 48, 62, 306, 359, 951 |
| FokI | GGATG | 4 cut(s) | 191, 425, 483, 935 |
| FriOI | GRGCYC | 2 cut(s) | 872, 964 |
| Fsp4HI | GCNGC | 5 cut(s) | 48, 62, 306, 359, 951 |
| FspBI | CTAG | 1 cut(s) | 624 |
| GlaI | GCGC | 1 cut(s) | 10 |
| GluI | GCNGC | 5 cut(s) | 48, 62, 306, 359, 951 |
| GsaI | CCCAGC | 1 cut(s) | 15 |
| GsuI | CTGGAG | 1 cut(s) | 570 |
| HaeII | RGCGCY | 1 cut(s) | 12 |
| HaeIII | GGCC | 5 cut(s) | 5, 40, 130, 523, 726 |
| HapII | CCGG | 8 cut(s) | 6, 44, 51, 71, 127, 148, 221, 968 |
| HgaI | GACGC | 1 cut(s) | 323 |
| HhaI | GCGC | 1 cut(s) | 11 |
| Hin1I | GRCGYC | 1 cut(s) | 315 |
| Hin1II | CATG | 2 cut(s) | 530, 883 |
| Hin6I | GCGC | 1 cut(s) | 9 |
| HinP1I | GCGC | 1 cut(s) | 9 |
| HincII | GTYRAC | 2 cut(s) | 115, 244 |
| HindII | GTYRAC | 2 cut(s) | 115, 244 |
| HinfI | GANTC | 4 cut(s) | 338, 344, 382, 402 |
| HpaII | CCGG | 8 cut(s) | 6, 44, 51, 71, 127, 148, 221, 968 |
| HphI | GGTGA | 1 cut(s) | 467 |
| Hpy166II | GTNNAC | 6 cut(s) | 115, 170, 244, 437, 814, 832 |
| Hpy188I | TCNGA | 2 cut(s) | 343, 645 |
| Hpy188III | TCNNGA | 2 cut(s) | 148, 766 |
| Hpy8I | GTNNAC | 6 cut(s) | 115, 170, 244, 437, 814, 832 |
| Hpy99I | CGWCG | 2 cut(s) | 116, 143 |
| HpyAV | CCTTC | 4 cut(s) | 329, 612, 754, 913 |
| HpyCH4III | ACNGT | 4 cut(s) | 666, 787, 818, 839 |
| HpyCH4V | TGCA | 4 cut(s) | 361, 416, 669, 844 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 296, 305, 314, 876, 947, 959, 968 |
| HpyF3I | CTNAG | 2 cut(s) | 291, 719 |
| Hsp92I | GRCGYC | 1 cut(s) | 315 |
| Hsp92II | CATG | 2 cut(s) | 530, 883 |
| HspAI | GCGC | 1 cut(s) | 9 |
| Kpn2I | TCCGGA | 1 cut(s) | 147 |
| KroI | GCCGGC | 1 cut(s) | 5 |
| KroNI | GCCGGC | 1 cut(s) | 7 |
| Ksp22I | TGATCA | 1 cut(s) | 427 |
| Kzo9I | GATC | 3 cut(s) | 15, 427, 559 |
| LmnI | GCTCC | 5 cut(s) | 94, 544, 613, 959, 967 |
| Lsp1109I | GCAGC | 4 cut(s) | 59, 292, 345, 937 |
| LweI | GCATC | 1 cut(s) | 403 |
| MaeI | CTAG | 1 cut(s) | 624 |
| MaeIII | GTNAC | 2 cut(s) | 224, 455 |
| MalI | GATC | 3 cut(s) | 17, 429, 561 |
| MboI | GATC | 3 cut(s) | 15, 427, 559 |
| MboII | GAAGA | 4 cut(s) | 391, 725, 818, 910 |
| MflI | RGATCY | 1 cut(s) | 15 |
| MhlI | GDGCHC | 2 cut(s) | 872, 964 |
| MlyI | GAGTC | 1 cut(s) | 353 |
| MroI | TCCGGA | 1 cut(s) | 147 |
| MroNI | GCCGGC | 1 cut(s) | 5 |
| MseI | TTAA | 3 cut(s) | 393, 705, 750 |
| MslI | CAYNNNNRTG | 2 cut(s) | 368, 936 |
| MspA1I | CMGCKG | 1 cut(s) | 83 |
| MspI | CCGG | 8 cut(s) | 6, 44, 51, 71, 127, 148, 221, 968 |
| MspR9I | CCNGG | 4 cut(s) | 222, 239, 744, 936 |
| MvaI | CCWGG | 3 cut(s) | 239, 744, 936 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 296, 305, 314, 876, 947, 959, 968 |
| NaeI | GCCGGC | 1 cut(s) | 7 |
| NciI | CCSGG | 1 cut(s) | 222 |
| NdeI | CATATG | 2 cut(s) | 556, 565 |
| NdeII | GATC | 3 cut(s) | 15, 427, 559 |
| NgoMIV | GCCGGC | 1 cut(s) | 5 |
| NlaIII | CATG | 2 cut(s) | 530, 883 |
| NlaIV | GGNNCC | 5 cut(s) | 17, 522, 540, 725, 929 |
| NmuCI | GTSAC | 1 cut(s) | 455 |
| NspV | TTCGAA | 1 cut(s) | 896 |
| OliI | CACNNNNGTG | 1 cut(s) | 936 |
| PdiI | GCCGGC | 1 cut(s) | 7 |
| PfeI | GAWTC | 3 cut(s) | 338, 382, 402 |
| PflFI | GACNNNGTC | 1 cut(s) | 143 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 569 |
| PkrI | GCNGC | 5 cut(s) | 49, 63, 307, 360, 952 |
| PleI | GAGTC | 1 cut(s) | 352 |
| PpsI | GAGTC | 1 cut(s) | 352 |
| PshBI | ATTAAT | 1 cut(s) | 705 |
| Psp124BI | GAGCTC | 1 cut(s) | 964 |
| Psp6I | CCWGG | 3 cut(s) | 237, 742, 934 |
| PspFI | CCCAGC | 1 cut(s) | 11 |
| PspGI | CCWGG | 3 cut(s) | 237, 742, 934 |
| PspN4I | GGNNCC | 5 cut(s) | 17, 522, 540, 725, 929 |
| PspPI | GGNCC | 6 cut(s) | 53, 129, 145, 150, 521, 724 |
| PsuI | RGATCY | 1 cut(s) | 15 |
| PsyI | GACNNNGTC | 1 cut(s) | 143 |
| RsaI | GTAC | 4 cut(s) | 591, 615, 636, 831 |
| RsaNI | GTAC | 4 cut(s) | 590, 614, 635, 830 |
| RseI | CAYNNNNRTG | 2 cut(s) | 368, 936 |
| SacI | GAGCTC | 1 cut(s) | 964 |
| SalI | GTCGAC | 1 cut(s) | 113 |
| SaqAI | TTAA | 3 cut(s) | 393, 705, 750 |
| SatI | GCNGC | 5 cut(s) | 48, 62, 306, 359, 951 |
| Sau3AI | GATC | 3 cut(s) | 15, 427, 559 |
| Sau96I | GGNCC | 6 cut(s) | 53, 129, 145, 150, 521, 724 |
| SchI | GAGTC | 1 cut(s) | 353 |
| ScrFI | CCNGG | 4 cut(s) | 222, 239, 744, 936 |
| SduI | GDGCHC | 2 cut(s) | 872, 964 |
| SfaNI | GCATC | 1 cut(s) | 403 |
| SfcI | CTRYAG | 1 cut(s) | 873 |
| SfuI | TTCGAA | 1 cut(s) | 896 |
| SinI | GGWCC | 3 cut(s) | 53, 145, 150 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 368, 936 |
| SmlI | CTYRAG | 1 cut(s) | 766 |
| SmoI | CTYRAG | 1 cut(s) | 766 |
| SsiI | CCGC | 6 cut(s) | 59, 62, 81, 132, 353, 410 |
| SspI | AATATT | 1 cut(s) | 893 |
| SspMI | CTAG | 1 cut(s) | 624 |
| SstI | GAGCTC | 1 cut(s) | 964 |
| StyD4I | CCNGG | 4 cut(s) | 220, 237, 742, 934 |
| TaaI | ACNGT | 4 cut(s) | 666, 787, 818, 839 |
| TaqI | TCGA | 3 cut(s) | 114, 336, 896 |
| TatI | WGTACW | 1 cut(s) | 829 |
| TauI | GCSGC | 1 cut(s) | 64 |
| TfiI | GAWTC | 3 cut(s) | 338, 382, 402 |
| Tru1I | TTAA | 3 cut(s) | 393, 705, 750 |
| Tru9I | TTAA | 3 cut(s) | 393, 705, 750 |
| TscAI | CASTG | 2 cut(s) | 292, 823 |
| TseFI | GTSAC | 1 cut(s) | 455 |
| TseI | GCWGC | 4 cut(s) | 47, 305, 358, 950 |
| Tsp45I | GTSAC | 1 cut(s) | 455 |
| TspDTI | ATGAA | 4 cut(s) | 148, 485, 773, 784 |
| TspGWI | ACGGA | 1 cut(s) | 380 |
| TspRI | CASTG | 2 cut(s) | 292, 823 |
| Tth111I | GACNNNGTC | 1 cut(s) | 143 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 569 |
| VpaK11BI | GGWCC | 3 cut(s) | 53, 145, 150 |
| VspI | ATTAAT | 1 cut(s) | 705 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 513 |
| XmiI | GTMKAC | 2 cut(s) | 114, 169 |
| XspI | CTAG | 1 cut(s) | 624 |