Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0003051

Physical Location & Seq

Genomic Coordinates Reverse (-)

62843947 .. 62862768

Gene Structure 18822 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG465400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1554 bp

ATGTTACTTCCTGATCTTATTTCGTCAGGGATTGTAGGGGATTCAAATGCTTATGATCAAAGTAAACGATTGCGTACTGGTGACTACACACAGGCTGGTTATTCCAGTCCGGTGCCTTTTCATCCGCCACCGCCACCTGTTTGGGGACCACACGGGTATATGGCTCCACCACCTCCTCCATATGATCCATATGGTTATCCTGTTGCTCCAGTACCAATGCCCCCTTCTGCTCCTGTACCAGCACCCAGCAGTTATGTACCTGTTCTGAACACAAAAGATAATCCACCATGCAATACCTTATTTATTGGCAATCTAGGAGAGAGCATTAACGAGGAAGAACTGAGGGGCCTATTCAGCTCACAACCTGGATTTAAGCAAATGAAGATCTTGCGACAGGAAAGGCATACTGTTTGCTTCATTGAGTTTGAAGATGTAAACAGTGCCACTGCTGTACACCACAATTTTCAAGGAGGTCAAGGTTTTGCAGCTGCCCTTTTGTTTCAGGGTTTTATTCGTAACGAGCATTTTGATCCAAAAAAATGGATTATACCTGGAGACTTTTCTGTACCTTGTTTATTAAAGGAGGAGTTGCTTTCTAGTGAAAGAAAAATCTACATCAGGGGAACAAGAAAGATAAAAAGAAAGCGTATTGCTGATGTTGTTGAGGCACTTATTGGTGCATTCCTTATTACCGGTGGTGAAATGGCTGCTGTGCACTTCATGAATTGGGTTGTGGAAGCACTAACTCATGGTTCTTACATGCTCCCTGAGATCCCAGGATGTTTTCAGCGGTTAGAATTTCTTGGGGACGCAGTTTTAGATTACCTGATCACTAGTTATCTGTGCAACAAATATCCTGGGATGTCGCCAGGAGTCTTAACTGATATGAGGTCTGCTTCGGTAAATAATGATTGTTTTGCCCGAGCTGCTGTGAAGGCTGAATTGCACAAGCACATTCTCCATGCTTCAAAGAAACTCCTCAAGGATATAGTTCACACAGTTGATAACTTTAAGAAGTTACCTACACAATCAACTTTTGGATGGGAATCTGAGACTTCGTTCCCCAGGGTACTAGGAGATATTATAGAGTCTCTTGGAGGGGCAATTTTTGTTGATTCTGGATACGATAAGAATGTTAAATCAAAATCATTCAAAAATGATATGGCTACCATTACTATTGAGGATGAAGGTAATGGCGTCACATACAAGCATACATCAACAGCTCCTGATAAGTGGACGGCAAGTAAATTAGCAAGCAAAGAAGTTTTGAGGTCCTTGAAAGAGAGTGCTCATTTATCAAAAGACGCTCTCCCATCTTCAAACAACCCCTTCACCACTCCACAACTCGTTTCCTTCACCAAGTCGACTCAGGAAATGTTTTTAAGCCTTCACACAGTCCACACACTTGACTGTGTGAAATTGCTGAATCTAATTATGGTTGATATATTACTCAAACTCAACAATCTTTCCATACCAAGAGGCACGGATGAAGATTTGCTTAAATGTATTGACTATCGAGAAGTCATGGCCAATATAATACAGCGGTTTACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002252 GO:0002376 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004525 GO:0004540 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006259 GO:0006396 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009615 GO:0009616 GO:0009892 GO:0009987 GO:0010033 GO:0010216 GO:0010267 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016070 GO:0016246 GO:0016441 GO:0016442 GO:0016458 GO:0016787 GO:0016788 GO:0016891 GO:0016893 GO:0019222 GO:0030422 GO:0031047 GO:0031050 GO:0031332 GO:0032296 GO:0032991 GO:0034641 GO:0035194 GO:0035821 GO:0040029 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043331 GO:0044003 GO:0044237 GO:0044238 GO:0044260 GO:0044403 GO:0044419 GO:0044424 GO:0044464 GO:0045087 GO:0046483 GO:0048519 GO:0050789 GO:0050896 GO:0051214 GO:0051607 GO:0051701 GO:0051704 GO:0051707 GO:0051716 GO:0051817 GO:0052018 GO:0052249 GO:0060255 GO:0065007 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0098542 GO:0098586 GO:0140098 GO:1901360 GO:1901363 GO:1901698 GO:1901699 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko05206 map05206

Pfam Domains

Protein Families

DEAD Dicer_dimer Helicase_C PAZ ResIII Ribonuclease_3 dsrm

Protein Analysis

517

Amino Acids

57.39

Weight (kDa)

6.6

Isoelectric Point (pI)

44.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	100 - 157	4.1e-09	RNA recognition motif
Ribonucleas_3_3	PF14622	245 - 377	1.5e-13	Ribonuclease-III-like
Ribonuclease_3	PF00636	263 - 374	4.7e-22	Ribonuclease III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003051)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21215 AT3G21215 AT3G21215 AT3G21215
fragaria_vesca	FvH4_3g14953 FvH4_3g16432 FvH4_4g15800 FvH4_4g32761 FvH4_5g34521 FvH4_6g16241 FvH4_6g37450 FvH4_6g45392 FvH4_7g15921 FvH4_7g31684
malus_domestica	MD09G1158000.v1.1 MD17G1144000.v1.1
prunus_persica	Prupe.3G168000_v2.0.a1
pyrus_communis	pycom09g07680 pycom17g13730
rosa_chinensis	RchiOBHm_Chr2g0150271 RchiOBHm_Chr2g0150291
rosa_laevigata	RLG00000020483
rosa_multiflora	Rmu_sc0001169.1_g000003 Rmu_sc0020705.1_g000001 Rmu_sc0024000.1_g000001 Rmu_sc0038093.1_g000001 Rmu_sc0040821.1_g000001 Rmu_ssc0000020.1_g000001
rosa_roxburghii	Rroxscaffold_2G00097320 Rroxscaffold_2G00097330
rosa_rugosa	Rorug02G0420200 Rorug02G0420300
rosa_samantha	Rh2AG479200 Rh2BG491500 Rh2CG465400 Rh2DG500300
rosa_wichuraiana	Rw2G038980 Rw2G039110

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	112
AccI	GTMKAC	1 cut(s)	1364
AciI	CCGC	4 cut(s)	125, 131, 790, 1543
AclWI	GGATC	3 cut(s)	179, 524, 766
AcoI	YGGCCR	1 cut(s)	1527
AcsI	RAATTY	1 cut(s)	797
AcyI	GRCGYC	1 cut(s)	1197
AfaI	GTAC	7 cut(s)	76, 213, 237, 258, 453, 567, 1071
AfiI	CCNNNNNNNGG	1 cut(s)	143
AgeI	ACCGGT	1 cut(s)	692
AgsI	TTSAA	7 cut(s)	45, 428, 467, 969, 1153, 1279, 1320
AhlI	ACTAGT	1 cut(s)	833
AjnI	CCWGG	6 cut(s)	364, 550, 775, 856, 868, 1064
AjuI	GAANNNNNNNTTGG	2 cut(s)	208, 240
AluBI	AGCT	4 cut(s)	357, 488, 926, 1223
AluI	AGCT	4 cut(s)	357, 488, 926, 1223
Alw21I	GWGCWC	2 cut(s)	717, 1291
Alw26I	GTCTC	3 cut(s)	549, 1046, 1095
Alw44I	GTGCAC	1 cut(s)	713
AlwI	GGATC	3 cut(s)	179, 524, 766
AlwNI	CAGNNNCTG	1 cut(s)	1226
Ama87I	CYCGRG	1 cut(s)	921
AoxI	GGCC	2 cut(s)	346, 1527
ApaLI	GTGCAC	1 cut(s)	713
ApeKI	GCWGC	4 cut(s)	485, 488, 707, 926
ApoI	RAATTY	1 cut(s)	797
AsiGI	ACCGGT	1 cut(s)	692
AspS9I	GGNCC	3 cut(s)	146, 346, 1272
AsuHPI	GGTGA	4 cut(s)	92, 710, 1324, 1348
AvaI	CYCGRG	1 cut(s)	921
AvaII	GGWCC	2 cut(s)	146, 1272
BaeGI	GKGCMC	1 cut(s)	717
BalI	TGGCCA	1 cut(s)	1529
BanI	GGYRCC	1 cut(s)	112
Bbv12I	GWGCWC	2 cut(s)	717, 1291
BbvI	GCAGC	4 cut(s)	475, 497, 694, 913
BccI	CCATC	2 cut(s)	1035, 1321
BceAI	ACGGC	1 cut(s)	1254
BciT130I	CCWGG	6 cut(s)	366, 552, 777, 858, 870, 1066
BciVI	GTATCC	1 cut(s)	1115
BclI	TGATCA	2 cut(s)	55, 828
BcoDI	GTCTC	3 cut(s)	549, 1046, 1095
BcuI	ACTAGT	1 cut(s)	833
BfaI	CTAG	4 cut(s)	314, 597, 834, 1073
BfuI	GTATCC	1 cut(s)	1115
BglII	AGATCT	1 cut(s)	384
BisI	GCNGC	4 cut(s)	486, 489, 708, 927
BlsI	GCNGC	4 cut(s)	487, 490, 709, 928
Bme1390I	CCNGG	6 cut(s)	366, 552, 777, 858, 870, 1066
Bme18I	GGWCC	2 cut(s)	146, 1272
BmeT110I	CYCGRG	1 cut(s)	921
BmgT120I	GGNCC	3 cut(s)	146, 346, 1272
BmiI	GGNNCC	4 cut(s)	114, 147, 165, 347
BmrFI	CCNGG	6 cut(s)	366, 552, 777, 858, 870, 1066
BpmI	CTGGAG	2 cut(s)	192, 573
BpuEI	CTTGAG	1 cut(s)	965
BsaBI	GATNNNNATC	1 cut(s)	1045
BsaHI	GRCGYC	1 cut(s)	1197
BsaJI	CCNNGG	4 cut(s)	775, 857, 1064, 1065
BsaWI	WCCGGW	2 cut(s)	109, 692
Bsc4I	CCNNNNNNNGG	1 cut(s)	143
Bse118I	RCCGGY	1 cut(s)	692
Bse1I	ACTGG	3 cut(s)	82, 105, 209
Bse8I	GATNNNNATC	1 cut(s)	1045
BseBI	CCWGG	6 cut(s)	366, 552, 777, 858, 870, 1066
BseDI	CCNNGG	4 cut(s)	775, 857, 1064, 1065
BseGI	GGATG	6 cut(s)	121, 785, 867, 1046, 1189, 1492
BseJI	GATNNNNATC	1 cut(s)	1045
BseLI	CCNNNNNNNGG	1 cut(s)	143
BseMII	CTCAG	4 cut(s)	332, 759, 1041, 1382
BseNI	ACTGG	3 cut(s)	82, 105, 209
BseRI	GAGGAG	3 cut(s)	165, 599, 968
BseSI	GKGCMC	1 cut(s)	717
BseXI	GCAGC	4 cut(s)	475, 497, 694, 913
BseYI	CCCAGC	1 cut(s)	245
BshFI	GGCC	2 cut(s)	348, 1529
BshNI	GGYRCC	1 cut(s)	112
BshTI	ACCGGT	1 cut(s)	692
BsiHKAI	GWGCWC	2 cut(s)	717, 1291
BsiHKCI	CYCGRG	1 cut(s)	921
BsiSI	CCGG	2 cut(s)	110, 693
BslFI	GGGAC	2 cut(s)	159, 821
BslI	CCNNNNNNNGG	1 cut(s)	143
BsmAI	GTCTC	3 cut(s)	549, 1046, 1095
BsmFI	GGGAC	2 cut(s)	159, 821
BsmI	GAATGC	1 cut(s)	680
BsnI	GGCC	2 cut(s)	348, 1529
BsoBI	CYCGRG	1 cut(s)	921
Bsp1286I	GDGCHC	2 cut(s)	717, 1291
Bsp1407I	TGTACA	1 cut(s)	451
Bsp143I	GATC	7 cut(s)	13, 55, 184, 384, 529, 771, 828
BspACI	CCGC	4 cut(s)	125, 131, 790, 1543
BspANI	GGCC	2 cut(s)	348, 1529
BspCNI	CTCAG	4 cut(s)	333, 760, 1042, 1381
BspHI	TCATGA	1 cut(s)	720
BspLI	GGNNCC	4 cut(s)	114, 147, 165, 347
BspPI	GGATC	3 cut(s)	179, 524, 766
BspT107I	GGYRCC	1 cut(s)	112
BsrFI	RCCGGY	1 cut(s)	692
BsrGI	TGTACA	1 cut(s)	451
BsrI	ACTGG	3 cut(s)	82, 105, 209
BssAI	RCCGGY	1 cut(s)	692
BssECI	CCNNGG	4 cut(s)	775, 857, 1064, 1065
BssMI	GATC	7 cut(s)	13, 55, 184, 384, 529, 771, 828
BssNI	GRCGYC	1 cut(s)	1197
Bst2UI	CCWGG	6 cut(s)	366, 552, 777, 858, 870, 1066
Bst4CI	ACNGT	5 cut(s)	409, 440, 1000, 1396, 1412
BstACI	GRCGYC	1 cut(s)	1197
BstAUI	TGTACA	1 cut(s)	451
BstC8I	GCNNGC	1 cut(s)	1255
BstDEI	CTNAG	4 cut(s)	341, 768, 1050, 1368
BstF5I	GGATG	6 cut(s)	121, 785, 867, 1046, 1189, 1492
BstKTI	GATC	7 cut(s)	16, 58, 187, 387, 532, 774, 831
BstMAI	GTCTC	3 cut(s)	549, 1046, 1095
BstMBI	GATC	7 cut(s)	13, 55, 184, 384, 529, 771, 828
BstMWI	GCNNNNNNNGC	3 cut(s)	354, 926, 935
BstNI	CCWGG	6 cut(s)	366, 552, 777, 858, 870, 1066
BstNSI	RCATGY	1 cut(s)	763
BstSCI	CCNGG	6 cut(s)	364, 550, 775, 856, 868, 1064
BstSLI	GKGCMC	1 cut(s)	717
BstV1I	GCAGC	4 cut(s)	475, 497, 694, 913
BstX2I	RGATCY	2 cut(s)	384, 771
BstXI	CCANNNNNNTGG	2 cut(s)	141, 540
BstYI	RGATCY	2 cut(s)	384, 771
BsuI	GTATCC	1 cut(s)	1115
BsuRI	GGCC	2 cut(s)	348, 1529
BtsCI	GGATG	6 cut(s)	121, 785, 867, 1046, 1189, 1492
BtsI	GCAGTG	1 cut(s)	444
BtsIMutI	CAGTG	2 cut(s)	444, 445
Cac8I	GCNNGC	1 cut(s)	1255
CaiI	CAGNNNCTG	1 cut(s)	1226
CciI	TCATGA	1 cut(s)	720
Cfr10I	RCCGGY	1 cut(s)	692
Cfr13I	GGNCC	3 cut(s)	146, 346, 1272
CseI	GACGC	3 cut(s)	818, 1186, 1313
Csp6I	GTAC	7 cut(s)	75, 212, 236, 257, 452, 566, 1070
CspAI	ACCGGT	1 cut(s)	692
CviAII	CATG	6 cut(s)	288, 721, 749, 760, 962, 1525
CviQI	GTAC	7 cut(s)	75, 212, 236, 257, 452, 566, 1070
DdeI	CTNAG	4 cut(s)	341, 768, 1050, 1368
DpnI	GATC	7 cut(s)	15, 57, 186, 386, 531, 773, 830
DpnII	GATC	7 cut(s)	13, 55, 184, 384, 529, 771, 828
EaeI	YGGCCR	1 cut(s)	1527
EciI	GGCGGA	1 cut(s)	114
Eco47I	GGWCC	2 cut(s)	146, 1272
Eco88I	CYCGRG	1 cut(s)	921
EcoO109I	RGGNCCY	2 cut(s)	346, 1272
EcoRII	CCWGG	6 cut(s)	364, 550, 775, 856, 868, 1064
FaeI	CATG	6 cut(s)	291, 724, 752, 763, 965, 1528
FalI	AAGNNNNNCTT	2 cut(s)	1482, 1514
FaqI	GGGAC	2 cut(s)	159, 821
FatI	CATG	6 cut(s)	287, 720, 748, 759, 961, 1524
FauNDI	CATATG	2 cut(s)	181, 190
FbaI	TGATCA	2 cut(s)	55, 828
FblI	GTMKAC	1 cut(s)	1364
Fnu4HI	GCNGC	4 cut(s)	486, 489, 708, 927
FokI	GGATG	6 cut(s)	108, 792, 874, 1053, 1196, 1499
Fsp4HI	GCNGC	4 cut(s)	486, 489, 708, 927
FspBI	CTAG	4 cut(s)	314, 597, 834, 1073
GluI	GCNGC	4 cut(s)	486, 489, 708, 927
GsaI	CCCAGC	1 cut(s)	249
GsuI	CTGGAG	2 cut(s)	192, 573
HaeIII	GGCC	2 cut(s)	348, 1529
HapII	CCGG	2 cut(s)	110, 693
HgaI	GACGC	3 cut(s)	818, 1186, 1313
Hin1I	GRCGYC	1 cut(s)	1197
Hin1II	CATG	6 cut(s)	291, 724, 752, 763, 965, 1528
HincII	GTYRAC	1 cut(s)	1365
HindII	GTYRAC	1 cut(s)	1365
HinfI	GANTC	7 cut(s)	41, 873, 1046, 1088, 1115, 1366, 1426
HpaII	CCGG	2 cut(s)	110, 693
HphI	GGTGA	4 cut(s)	92, 710, 1324, 1348
Hpy166II	GTNNAC	9 cut(s)	65, 436, 454, 715, 994, 1236, 1365, 1399, 1548
Hpy188I	TCNGA	2 cut(s)	267, 1051
Hpy188III	TCNNGA	6 cut(s)	11, 721, 1119, 1226, 1370, 1517
Hpy8I	GTNNAC	9 cut(s)	65, 436, 454, 715, 994, 1236, 1365, 1399, 1548
HpyAV	CCTTC	6 cut(s)	234, 928, 1181, 1339, 1363, 1397
HpyCH4III	ACNGT	5 cut(s)	409, 440, 1000, 1396, 1412
HpyCH4V	TGCA	6 cut(s)	291, 485, 680, 715, 846, 946
HpyF10VI	GCNNNNNNNGC	3 cut(s)	354, 926, 935
HpyF3I	CTNAG	4 cut(s)	341, 768, 1050, 1368
Hsp92I	GRCGYC	1 cut(s)	1197
Hsp92II	CATG	6 cut(s)	291, 724, 752, 763, 965, 1528
Ksp22I	TGATCA	2 cut(s)	55, 828
Kzo9I	GATC	7 cut(s)	13, 55, 184, 384, 529, 771, 828
LmnI	GCTCC	5 cut(s)	169, 211, 235, 768, 1228
Lsp1109I	GCAGC	4 cut(s)	475, 497, 694, 913
MaeI	CTAG	4 cut(s)	314, 597, 834, 1073
MaeIII	GTNAC	5 cut(s)	3, 80, 515, 1017, 1198
MalI	GATC	7 cut(s)	15, 57, 186, 386, 531, 773, 830
MboI	GATC	7 cut(s)	13, 55, 184, 384, 529, 771, 828
MboII	GAAGA	5 cut(s)	347, 394, 440, 1308, 1502
MflI	RGATCY	2 cut(s)	384, 771
MhlI	GDGCHC	2 cut(s)	717, 1291
MlsI	TGGCCA	1 cut(s)	1529
MluCI	AATT	8 cut(s)	460, 724, 797, 941, 1104, 1247, 1418, 1431
MluNI	TGGCCA	1 cut(s)	1529
MlyI	GAGTC	3 cut(s)	882, 1097, 1360
Mox20I	TGGCCA	1 cut(s)	1529
MscI	TGGCCA	1 cut(s)	1529
MseI	TTAA	8 cut(s)	327, 372, 578, 878, 1011, 1137, 1382, 1500
Msp20I	TGGCCA	1 cut(s)	1529
MspA1I	CMGCKG	3 cut(s)	488, 790, 1543
MspI	CCGG	2 cut(s)	110, 693
MspR9I	CCNGG	6 cut(s)	366, 552, 777, 858, 870, 1066
Mva1269I	GAATGC	1 cut(s)	680
MvaI	CCWGG	6 cut(s)	366, 552, 777, 858, 870, 1066
MwoI	GCNNNNNNNGC	3 cut(s)	354, 926, 935
NdeI	CATATG	2 cut(s)	181, 190
NdeII	GATC	7 cut(s)	13, 55, 184, 384, 529, 771, 828
NlaIII	CATG	6 cut(s)	291, 724, 752, 763, 965, 1528
NlaIV	GGNNCC	4 cut(s)	114, 147, 165, 347
NmuCI	GTSAC	2 cut(s)	80, 1198
NspI	RCATGY	1 cut(s)	763
PagI	TCATGA	1 cut(s)	720
PasI	CCCWGGG	1 cut(s)	1065
PctI	GAATGC	1 cut(s)	680
PfeI	GAWTC	4 cut(s)	41, 1046, 1115, 1426
PinAI	ACCGGT	1 cut(s)	692
PkrI	GCNGC	4 cut(s)	487, 490, 709, 928
PleI	GAGTC	3 cut(s)	881, 1096, 1360
PpsI	GAGTC	3 cut(s)	881, 1096, 1360
PpuMI	RGGWCCY	1 cut(s)	1272
Psp5II	RGGWCCY	1 cut(s)	1272
Psp6I	CCWGG	6 cut(s)	364, 550, 775, 856, 868, 1064
PspFI	CCCAGC	1 cut(s)	245
PspGI	CCWGG	6 cut(s)	364, 550, 775, 856, 868, 1064
PspN4I	GGNNCC	4 cut(s)	114, 147, 165, 347
PspPI	GGNCC	3 cut(s)	146, 346, 1272
PspPPI	RGGWCCY	1 cut(s)	1272
PstNI	CAGNNNCTG	1 cut(s)	1226
PsuI	RGATCY	2 cut(s)	384, 771
PvuII	CAGCTG	1 cut(s)	488
RsaI	GTAC	7 cut(s)	76, 213, 237, 258, 453, 567, 1071
RsaNI	GTAC	7 cut(s)	75, 212, 236, 257, 452, 566, 1070
SalI	GTCGAC	1 cut(s)	1363
SaqAI	TTAA	8 cut(s)	327, 372, 578, 878, 1011, 1137, 1382, 1500
SatI	GCNGC	4 cut(s)	486, 489, 708, 927
Sau3AI	GATC	7 cut(s)	13, 55, 184, 384, 529, 771, 828
Sau96I	GGNCC	3 cut(s)	146, 346, 1272
SchI	GAGTC	3 cut(s)	882, 1097, 1360
ScrFI	CCNGG	6 cut(s)	366, 552, 777, 858, 870, 1066
SduI	GDGCHC	2 cut(s)	717, 1291
SinI	GGWCC	2 cut(s)	146, 1272
SmlI	CTYRAG	1 cut(s)	980
SmoI	CTYRAG	1 cut(s)	980
SpeI	ACTAGT	1 cut(s)	833
Sse9I	AATT	8 cut(s)	460, 724, 797, 941, 1104, 1247, 1418, 1431
SsiI	CCGC	4 cut(s)	125, 131, 790, 1543
SspMI	CTAG	4 cut(s)	314, 597, 834, 1073
StyD4I	CCNGG	6 cut(s)	364, 550, 775, 856, 868, 1064
TaaI	ACNGT	5 cut(s)	409, 440, 1000, 1396, 1412
TaqI	TCGA	2 cut(s)	1364, 1516
TasI	AATT	8 cut(s)	460, 724, 797, 941, 1104, 1247, 1418, 1431
TatI	WGTACW	1 cut(s)	451
TfiI	GAWTC	4 cut(s)	41, 1046, 1115, 1426
Tru1I	TTAA	8 cut(s)	327, 372, 578, 878, 1011, 1137, 1382, 1500
Tru9I	TTAA	8 cut(s)	327, 372, 578, 878, 1011, 1137, 1382, 1500
TscAI	CASTG	2 cut(s)	445, 451
TseFI	GTSAC	2 cut(s)	80, 1198
TseI	GCWGC	4 cut(s)	485, 488, 707, 926
Tsp45I	GTSAC	2 cut(s)	80, 1198
TspDTI	ATGAA	7 cut(s)	110, 395, 406, 709, 737, 1200, 1503
TspGWI	ACGGA	1 cut(s)	1499
TspRI	CASTG	2 cut(s)	445, 451
VneI	GTGCAC	1 cut(s)	713
VpaK11BI	GGWCC	2 cut(s)	146, 1272
XapI	RAATTY	1 cut(s)	797
XceI	RCATGY	1 cut(s)	763
XmiI	GTMKAC	1 cut(s)	1364
XspI	CTAG	4 cut(s)	314, 597, 834, 1073

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.