Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000020.1

Orthogroup ID

OG0003051

Physical Location & Seq

Genomic Coordinates Forward (+)

1 .. 5954

Gene Structure 5954 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000020.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1732 bp

tttgaactctgatgggtttgctctactgtccatcttaaaccactgggcttttgtccccaaacccatttcctcaagctggaatctttctgattccacaccatgcaaatgggtaggaatagaatgtgaccctgccctaaatgtttttgccttgaatgtctctagttatggaatttctggtcagttaggacctgaaattgggaacttgagtcacttacagactcttgttttgagtttcaataatttttctggccaaattcccatggagttgggcagttgtagtcttcttgagaccttggatttgagttataaccagttgagcggcgtattgcccgagagtctgaacaaccttaagaacctgtcctatctacaagtcagtaacaacagtcttgagggtaccatttcttttggttcagaaaattgcaagaatttgactttcttggatttgtcaatcaatcagtttagtggaggtcttccatcagcccttgccaattgtactggtttaacggcattttcggctgcagttaacaatttagttggtccaataccgtcttcctttggcctactagataagctacaacttctataccttcctgagaatcagctgtctggaaaaatacctccagaacttggcaagtgtaagtccttgaccggactacaattgtacacaaaccaactagttggagaaattcccgatgagttgggaatgttaaccaacttgcaggaccttcaattatttcaaaacaacttgactggtgaaattccagttagcatatggaagattcaaactcttcaatatgtccatctatacaagaataacctcactggggaactgcctctagagatgactgagctcaagcaactggaaaacatcacattgtacaacaaccagttttatggagttgtacctcgagctttggggattaacagcagtttagttcagttagattttatgtataatatgttcactggtagcatccctccaaatctttgccttggaaagaagctaagggcattgaatatggggttcaatcagtttcaaggagtcttaactgatatgagatctgcttcggtaaataatgattgttttgcccgagcggctgtgaaggctgaattgcacaagcacattctccatgcttcaaagaaactccacaaggatatagttcacacagttgataactttaagaagttacctacacaatcaacttttggatgggaatctgagacttcgttccccagggtagtaggagatattatagagtctcttggaggggcaatttttgttgattctggatacgataagaatgttgtatttcagagtatacgtcctctgttagagcccttgattactccagaaatgataactctccatcctgatagagagctgaatgaactttgttcaaaaatgcattatgacaggaagaaatcaatatcattcaaaaatgatatggctaccattactattgaggttgaaggtaatggtgtcacatacaagcatacatcaacagctcttgagaagtggacggcaagtaaattagcaagcaaagaagttttgaggtccttgaaagagagtgctcatttatcaaaagacgctctcccatcttcaaacaaccccttcaccactccacaactcgtttccttcaccaagtcgactcaggaaatggttctagccagtggagcagcagcagcagctcccccaacaggaagtgctgctgctgctgcaagcatgcgctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002252 GO:0002376 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004525 GO:0004540 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006259 GO:0006396 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009615 GO:0009616 GO:0009892 GO:0009987 GO:0010033 GO:0010216 GO:0010267 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016070 GO:0016246 GO:0016441 GO:0016442 GO:0016458 GO:0016787 GO:0016788 GO:0016891 GO:0016893 GO:0019222 GO:0030422 GO:0031047 GO:0031050 GO:0031332 GO:0032296 GO:0032991 GO:0034641 GO:0035194 GO:0035821 GO:0040029 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043331 GO:0044003 GO:0044237 GO:0044238 GO:0044260 GO:0044403 GO:0044419 GO:0044424 GO:0044464 GO:0045087 GO:0046483 GO:0048519 GO:0050789 GO:0050896 GO:0051214 GO:0051607 GO:0051701 GO:0051704 GO:0051707 GO:0051716 GO:0051817 GO:0052018 GO:0052249 GO:0060255 GO:0065007 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0098542 GO:0098586 GO:0140098 GO:1901360 GO:1901363 GO:1901698 GO:1901699 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko05206 map05206

Pfam Domains

Protein Families

DEAD Dicer_dimer Helicase_C PAZ ResIII Ribonuclease_3 dsrm

Protein Analysis

576

Amino Acids

62.9

Weight (kDa)

5.88

Isoelectric Point (pI)

33.63

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003051)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21215 AT3G21215 AT3G21215 AT3G21215
fragaria_vesca	FvH4_3g14953 FvH4_3g16432 FvH4_4g15800 FvH4_4g32761 FvH4_5g34521 FvH4_6g16241 FvH4_6g37450 FvH4_6g45392 FvH4_7g15921 FvH4_7g31684
malus_domestica	MD09G1158000.v1.1 MD17G1144000.v1.1
prunus_persica	Prupe.3G168000_v2.0.a1
pyrus_communis	pycom09g07680 pycom17g13730
rosa_chinensis	RchiOBHm_Chr2g0150271 RchiOBHm_Chr2g0150291
rosa_laevigata	RLG00000020483
rosa_multiflora	Rmu_sc0001169.1_g000003 Rmu_sc0020705.1_g000001 Rmu_sc0024000.1_g000001 Rmu_sc0038093.1_g000001 Rmu_sc0040821.1_g000001 Rmu_ssc0000020.1_g000001
rosa_roxburghii	Rroxscaffold_2G00097320 Rroxscaffold_2G00097330
rosa_rugosa	Rorug02G0420200 Rorug02G0420300
rosa_samantha	Rh2AG479200 Rh2BG491500 Rh2CG465400 Rh2DG500300
rosa_wichuraiana	Rw2G038980 Rw2G039110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	307
Acc65I	GGTACC	1 cut(s)	393
AccB1I	GGYRCC	1 cut(s)	393
AccB7I	CCANNNNNTGG	1 cut(s)	627
AccBSI	CCGCTC	2 cut(s)	319, 1095
AccI	GTMKAC	2 cut(s)	1319, 1647
AciI	CCGC	2 cut(s)	319, 1095
AcoI	YGGCCR	1 cut(s)	248
AcsI	RAATTY	5 cut(s)	169, 253, 425, 685, 757
AfaI	GTAC	5 cut(s)	395, 494, 663, 879, 904
AfiI	CCNNNNNNNGG	5 cut(s)	76, 195, 627, 824, 1698
AflII	CTTAAG	1 cut(s)	348
AhlI	ACTAGT	1 cut(s)	674
AjnI	CCWGG	1 cut(s)	1233
AjuI	GAANNNNNNNTTGG	2 cut(s)	533, 565
AluBI	AGCT	9 cut(s)	76, 572, 602, 851, 912, 1004, 1382, 1506, 1689
AluI	AGCT	9 cut(s)	76, 572, 602, 851, 912, 1004, 1382, 1506, 1689
Alw21I	GWGCWC	2 cut(s)	853, 1574
Alw26I	GTCTC	4 cut(s)	161, 282, 1215, 1264
Ama87I	CYCGRG	3 cut(s)	330, 907, 1090
AoxI	GGCC	2 cut(s)	248, 557
ApeKI	GCWGC	9 cut(s)	516, 1677, 1680, 1683, 1686, 1707, 1710, 1713, 1716
ApoI	RAATTY	5 cut(s)	169, 253, 425, 685, 757
ArsI	GACNNNNNNTTYG	4 cut(s)	209, 241, 281, 313
Asp700I	GAANNNNTTC	1 cut(s)	1660
Asp718I	GGTACC	1 cut(s)	393
AspLEI	GCGC	1 cut(s)	1729
AspS9I	GGNCC	4 cut(s)	186, 537, 722, 1555
AsuHPI	GGTGA	3 cut(s)	765, 1607, 1631
AvaI	CYCGRG	3 cut(s)	330, 907, 1090
AvaII	GGWCC	4 cut(s)	186, 537, 722, 1555
BalI	TGGCCA	1 cut(s)	250
BanI	GGYRCC	1 cut(s)	393
BanII	GRGCYC	2 cut(s)	853, 1339
BbsI	GAAGAC	3 cut(s)	273, 462, 541
Bbv12I	GWGCWC	2 cut(s)	853, 1574
BbvI	GCAGC	9 cut(s)	503, 1689, 1692, 1694, 1695, 1697, 1698, 1700, 1703
BccI	CCATC	7 cut(s)	6, 39, 482, 808, 1204, 1375, 1604
BceAI	ACGGC	2 cut(s)	520, 1537
BciT130I	CCWGG	1 cut(s)	1235
BciVI	GTATCC	1 cut(s)	1284
BcoDI	GTCTC	4 cut(s)	161, 282, 1215, 1264
BcuI	ACTAGT	1 cut(s)	674
BfaI	CTAG	5 cut(s)	160, 564, 675, 837, 1665
BfmI	CTRYAG	1 cut(s)	517
BfrI	CTTAAG	1 cut(s)	348
BfuI	GTATCC	1 cut(s)	1284
BglI	GCCNNNNNGGC	1 cut(s)	1095
BglII	AGATCT	1 cut(s)	1059
Bme1390I	CCNGG	1 cut(s)	1235
Bme18I	GGWCC	4 cut(s)	186, 537, 722, 1555
BmeT110I	CYCGRG	3 cut(s)	330, 907, 1090
BmgT120I	GGNCC	4 cut(s)	186, 537, 722, 1555
BmiI	GGNNCC	1 cut(s)	395
BmrFI	CCNGG	1 cut(s)	1235
BmrI	ACTGGG	2 cut(s)	53, 832
BmsI	GCATC	1 cut(s)	982
BmuI	ACTGGG	2 cut(s)	53, 832
BpiI	GAAGAC	3 cut(s)	273, 462, 541
BpmI	CTGGAG	2 cut(s)	604, 1333
Bpu10I	CCTNAGC	1 cut(s)	1005
BpuEI	CTTGAG	6 cut(s)	56, 224, 306, 408, 837, 1530
BsaBI	GATNNNNATC	1 cut(s)	1214
BsaI	GGTCTC	1 cut(s)	282
BsaJI	CCNNGG	5 cut(s)	259, 292, 992, 1233, 1234
BsaWI	WCCGGW	1 cut(s)	648
Bsc4I	CCNNNNNNNGG	5 cut(s)	76, 195, 627, 824, 1698
Bse8I	GATNNNNATC	1 cut(s)	1214
BseBI	CCWGG	1 cut(s)	1235
BseDI	CCNNGG	5 cut(s)	259, 292, 992, 1233, 1234
BseGI	GGATG	3 cut(s)	973, 1215, 1367
BseJI	GATNNNNATC	1 cut(s)	1214
BseLI	CCNNNNNNNGG	5 cut(s)	76, 195, 627, 824, 1698
BseMII	CTCAG	4 cut(s)	583, 838, 1210, 1665
BseXI	GCAGC	9 cut(s)	503, 1689, 1692, 1694, 1695, 1697, 1698, 1700, 1703
BshFI	GGCC	2 cut(s)	250, 559
BshNI	GGYRCC	1 cut(s)	393
BsiHKAI	GWGCWC	2 cut(s)	853, 1574
BsiHKCI	CYCGRG	3 cut(s)	330, 907, 1090
BsiSI	CCGG	1 cut(s)	649
BslFI	GGGAC	1 cut(s)	39
BslI	CCNNNNNNNGG	5 cut(s)	76, 195, 627, 824, 1698
BsmAI	GTCTC	4 cut(s)	161, 282, 1215, 1264
BsmFI	GGGAC	1 cut(s)	39
BsnI	GGCC	2 cut(s)	250, 559
Bso31I	GGTCTC	1 cut(s)	282
BsoBI	CYCGRG	3 cut(s)	330, 907, 1090
Bsp1286I	GDGCHC	3 cut(s)	853, 1339, 1574
Bsp1407I	TGTACA	2 cut(s)	661, 877
Bsp143I	GATC	1 cut(s)	1059
Bsp19I	CCATGG	1 cut(s)	259
BspACI	CCGC	2 cut(s)	319, 1095
BspANI	GGCC	2 cut(s)	250, 559
BspCNI	CTCAG	4 cut(s)	584, 839, 1211, 1664
BspLI	GGNNCC	1 cut(s)	395
BspMAI	CTGCAG	1 cut(s)	521
BspT107I	GGYRCC	1 cut(s)	393
BspTI	CTTAAG	1 cut(s)	348
BspTNI	GGTCTC	1 cut(s)	282
BsrBI	CCGCTC	2 cut(s)	319, 1095
BsrGI	TGTACA	2 cut(s)	661, 877
BssECI	CCNNGG	5 cut(s)	259, 292, 992, 1233, 1234
BssMI	GATC	1 cut(s)	1059
BssNAI	GTATAC	1 cut(s)	1320
BssT1I	CCWWGG	3 cut(s)	259, 292, 992
Bst1107I	GTATAC	1 cut(s)	1320
Bst2UI	CCWGG	1 cut(s)	1235
Bst4CI	ACNGT	4 cut(s)	28, 384, 547, 1169
Bst6I	CTCTTC	1 cut(s)	793
BstAFI	CTTAAG	1 cut(s)	348
BstAUI	TGTACA	2 cut(s)	661, 877
BstC8I	GCNNGC	3 cut(s)	1538, 1721, 1725
BstDEI	CTNAG	5 cut(s)	592, 847, 1005, 1219, 1651
BstDSI	CCRYGG	1 cut(s)	259
BstF5I	GGATG	3 cut(s)	973, 1215, 1367
BstHHI	GCGC	1 cut(s)	1729
BstKTI	GATC	1 cut(s)	1062
BstMAI	GTCTC	4 cut(s)	161, 282, 1215, 1264
BstMBI	GATC	1 cut(s)	1059
BstMWI	GCNNNNNNNGC	8 cut(s)	513, 1095, 1104, 1674, 1683, 1686, 1713, 1716
BstNI	CCWGG	1 cut(s)	1235
BstNSI	RCATGY	1 cut(s)	1727
BstSCI	CCNGG	1 cut(s)	1233
BstSFI	CTRYAG	1 cut(s)	517
BstV1I	GCAGC	9 cut(s)	503, 1689, 1692, 1694, 1695, 1697, 1698, 1700, 1703
BstV2I	GAAGAC	3 cut(s)	273, 462, 541
BstX2I	RGATCY	1 cut(s)	1059
BstXI	CCANNNNNNTGG	4 cut(s)	106, 266, 678, 894
BstYI	RGATCY	1 cut(s)	1059
BstZ17I	GTATAC	1 cut(s)	1320
BsuI	GTATCC	1 cut(s)	1284
BsuRI	GGCC	2 cut(s)	250, 559
BtgI	CCRYGG	1 cut(s)	259
BtsCI	GGATG	3 cut(s)	973, 1215, 1367
BtsIMutI	CAGTG	4 cut(s)	41, 820, 964, 1676
Cac8I	GCNNGC	3 cut(s)	1538, 1721, 1725
CfoI	GCGC	1 cut(s)	1729
Cfr13I	GGNCC	4 cut(s)	186, 537, 722, 1555
CseI	GACGC	1 cut(s)	1596
Csp6I	GTAC	5 cut(s)	394, 493, 662, 878, 903
CviAII	CATG	4 cut(s)	100, 260, 1131, 1724
CviQI	GTAC	5 cut(s)	394, 493, 662, 878, 903
DdeI	CTNAG	5 cut(s)	592, 847, 1005, 1219, 1651
DpnI	GATC	1 cut(s)	1061
DpnII	GATC	1 cut(s)	1059
EaeI	YGGCCR	1 cut(s)	248
Eam1104I	CTCTTC	1 cut(s)	793
EarI	CTCTTC	1 cut(s)	793
Ecl136II	GAGCTC	1 cut(s)	851
Eco130I	CCWWGG	3 cut(s)	259, 292, 992
Eco24I	GRGCYC	2 cut(s)	853, 1339
Eco31I	GGTCTC	1 cut(s)	282
Eco47I	GGWCC	4 cut(s)	186, 537, 722, 1555
Eco53kI	GAGCTC	1 cut(s)	851
Eco88I	CYCGRG	3 cut(s)	330, 907, 1090
EcoICRI	GAGCTC	1 cut(s)	851
EcoO109I	RGGNCCY	3 cut(s)	186, 722, 1555
EcoRII	CCWGG	1 cut(s)	1233
EcoT14I	CCWWGG	3 cut(s)	259, 292, 992
EcoT22I	ATGCAT	1 cut(s)	1408
EcoT38I	GRGCYC	2 cut(s)	853, 1339
ErhI	CCWWGG	3 cut(s)	259, 292, 992
FaeI	CATG	4 cut(s)	103, 263, 1134, 1727
FaqI	GGGAC	1 cut(s)	39
FatI	CATG	4 cut(s)	99, 259, 1130, 1723
FauNDI	CATATG	1 cut(s)	771
FblI	GTMKAC	2 cut(s)	1319, 1647
FokI	GGATG	3 cut(s)	960, 1222, 1354
FriOI	GRGCYC	2 cut(s)	853, 1339
FspBI	CTAG	5 cut(s)	160, 564, 675, 837, 1665
GlaI	GCGC	1 cut(s)	1728
GsuI	CTGGAG	2 cut(s)	604, 1333
HaeIII	GGCC	2 cut(s)	250, 559
HapII	CCGG	1 cut(s)	649
HgaI	GACGC	1 cut(s)	1596
HhaI	GCGC	1 cut(s)	1729
Hin1II	CATG	4 cut(s)	103, 263, 1134, 1727
Hin6I	GCGC	1 cut(s)	1727
HinP1I	GCGC	1 cut(s)	1727
HincII	GTYRAC	3 cut(s)	524, 709, 1648
HindII	GTYRAC	3 cut(s)	524, 709, 1648
HpaI	GTTAAC	2 cut(s)	524, 709
HpaII	CCGG	1 cut(s)	649
HphI	GGTGA	3 cut(s)	765, 1607, 1631
Hpy166II	GTNNAC	8 cut(s)	524, 664, 709, 964, 1163, 1320, 1519, 1648
Hpy188I	TCNGA	6 cut(s)	11, 89, 340, 413, 1220, 1315
Hpy8I	GTNNAC	8 cut(s)	524, 664, 709, 964, 1163, 1320, 1519, 1648
HpyAV	CCTTC	6 cut(s)	597, 735, 1097, 1464, 1622, 1646
HpyCH4III	ACNGT	4 cut(s)	28, 384, 547, 1169
HpyCH4IV	ACGT	1 cut(s)	1322
HpyCH4V	TGCA	7 cut(s)	103, 421, 519, 719, 1115, 1406, 1719
HpyF10VI	GCNNNNNNNGC	8 cut(s)	513, 1095, 1104, 1674, 1683, 1686, 1713, 1716
HpyF3I	CTNAG	5 cut(s)	592, 847, 1005, 1219, 1651
HpySE526I	ACGT	1 cut(s)	1322
Hsp92II	CATG	4 cut(s)	103, 263, 1134, 1727
HspAI	GCGC	1 cut(s)	1727
KpnI	GGTACC	1 cut(s)	397
KspAI	GTTAAC	2 cut(s)	524, 709
Kzo9I	GATC	1 cut(s)	1059
LmnI	GCTCC	2 cut(s)	1674, 1694
Lsp1109I	GCAGC	9 cut(s)	503, 1689, 1692, 1694, 1695, 1697, 1698, 1700, 1703
LweI	GCATC	1 cut(s)	982
MaeI	CTAG	5 cut(s)	160, 564, 675, 837, 1665
MaeII	ACGT	1 cut(s)	1322
MaeIII	GTNAC	5 cut(s)	123, 207, 375, 1186, 1481
MalI	GATC	1 cut(s)	1061
MbiI	CCGCTC	2 cut(s)	319, 1095
MboI	GATC	1 cut(s)	1059
MboII	GAAGA	7 cut(s)	273, 462, 541, 780, 788, 1430, 1591
MfeI	CAATTG	2 cut(s)	488, 657
MflI	RGATCY	1 cut(s)	1059
MhlI	GDGCHC	3 cut(s)	853, 1339, 1574
MlsI	TGGCCA	1 cut(s)	250
MluNI	TGGCCA	1 cut(s)	250
MlyI	GAGTC	6 cut(s)	212, 215, 344, 1051, 1266, 1643
MmeI	TCCRAC	1 cut(s)	659
Mox20I	TGGCCA	1 cut(s)	250
Mph1103I	ATGCAT	1 cut(s)	1408
MroXI	GAANNNNTTC	1 cut(s)	1660
MscI	TGGCCA	1 cut(s)	250
MseI	TTAA	8 cut(s)	36, 349, 501, 523, 708, 922, 1047, 1180
MslI	CAYNNNNRTG	1 cut(s)	104
Msp20I	TGGCCA	1 cut(s)	250
MspA1I	CMGCKG	1 cut(s)	602
MspCI	CTTAAG	1 cut(s)	348
MspI	CCGG	1 cut(s)	649
MspR9I	CCNGG	1 cut(s)	1235
MunI	CAATTG	2 cut(s)	488, 657
MvaI	CCWGG	1 cut(s)	1235
MwoI	GCNNNNNNNGC	8 cut(s)	513, 1095, 1104, 1674, 1683, 1686, 1713, 1716
NcoI	CCATGG	1 cut(s)	259
NdeI	CATATG	1 cut(s)	771
NdeII	GATC	1 cut(s)	1059
NlaIII	CATG	4 cut(s)	103, 263, 1134, 1727
NlaIV	GGNNCC	1 cut(s)	395
NmuCI	GTSAC	3 cut(s)	123, 207, 1481
NsiI	ATGCAT	1 cut(s)	1408
NspI	RCATGY	1 cut(s)	1727
PaeI	GCATGC	1 cut(s)	1727
PaeR7I	CTCGAG	1 cut(s)	907
PasI	CCCWGGG	1 cut(s)	1234
PdmI	GAANNNNTTC	1 cut(s)	1660
PfeI	GAWTC	6 cut(s)	80, 90, 596, 779, 1215, 1284
PflMI	CCANNNNNTGG	1 cut(s)	627
PleI	GAGTC	6 cut(s)	212, 214, 343, 1050, 1265, 1643
PpsI	GAGTC	6 cut(s)	212, 214, 343, 1050, 1265, 1643
PpuMI	RGGWCCY	3 cut(s)	186, 722, 1555
PsiI	TTATAA	1 cut(s)	307
Psp124BI	GAGCTC	1 cut(s)	853
Psp5II	RGGWCCY	3 cut(s)	186, 722, 1555
Psp6I	CCWGG	1 cut(s)	1233
PspGI	CCWGG	1 cut(s)	1233
PspN4I	GGNNCC	1 cut(s)	395
PspPI	GGNCC	4 cut(s)	186, 537, 722, 1555
PspPPI	RGGWCCY	3 cut(s)	186, 722, 1555
PspXI	VCTCGAGB	1 cut(s)	907
PsrI	GAACNNNNNNTAC	2 cut(s)	945, 977
PstI	CTGCAG	1 cut(s)	521
PsuI	RGATCY	1 cut(s)	1059
PvuII	CAGCTG	1 cut(s)	602
RsaI	GTAC	5 cut(s)	395, 494, 663, 879, 904
RsaNI	GTAC	5 cut(s)	394, 493, 662, 878, 903
RseI	CAYNNNNRTG	1 cut(s)	104
SacI	GAGCTC	1 cut(s)	853
SalI	GTCGAC	1 cut(s)	1646
SaqAI	TTAA	8 cut(s)	36, 349, 501, 523, 708, 922, 1047, 1180
Sau3AI	GATC	1 cut(s)	1059
Sau96I	GGNCC	4 cut(s)	186, 537, 722, 1555
SchI	GAGTC	6 cut(s)	212, 215, 344, 1051, 1266, 1643
ScrFI	CCNGG	1 cut(s)	1235
SduI	GDGCHC	3 cut(s)	853, 1339, 1574
SfaNI	GCATC	1 cut(s)	982
SfcI	CTRYAG	1 cut(s)	517
Sfr274I	CTCGAG	1 cut(s)	907
SinI	GGWCC	4 cut(s)	186, 537, 722, 1555
SlaI	CTCGAG	1 cut(s)	907
SmiMI	CAYNNNNRTG	1 cut(s)	104
SmlI	CTYRAG	8 cut(s)	71, 203, 285, 348, 387, 852, 907, 1509
SmoI	CTYRAG	8 cut(s)	71, 203, 285, 348, 387, 852, 907, 1509
SpeI	ACTAGT	1 cut(s)	674
SphI	GCATGC	1 cut(s)	1727
SsiI	CCGC	2 cut(s)	319, 1095
SspMI	CTAG	5 cut(s)	160, 564, 675, 837, 1665
SstI	GAGCTC	1 cut(s)	853
StyD4I	CCNGG	1 cut(s)	1233
StyI	CCWWGG	3 cut(s)	259, 292, 992
TaaI	ACNGT	4 cut(s)	28, 384, 547, 1169
TaiI	ACGT	1 cut(s)	1325
TaqI	TCGA	2 cut(s)	908, 1647
TatI	WGTACW	3 cut(s)	492, 661, 877
TauI	GCSGC	2 cut(s)	322, 1098
TfiI	GAWTC	6 cut(s)	80, 90, 596, 779, 1215, 1284
Tru1I	TTAA	8 cut(s)	36, 349, 501, 523, 708, 922, 1047, 1180
Tru9I	TTAA	8 cut(s)	36, 349, 501, 523, 708, 922, 1047, 1180
TscAI	CASTG	4 cut(s)	48, 827, 971, 1676
TseFI	GTSAC	3 cut(s)	123, 207, 1481
TseI	GCWGC	9 cut(s)	516, 1677, 1680, 1683, 1686, 1707, 1710, 1713, 1716
Tsp45I	GTSAC	3 cut(s)	123, 207, 1481
TspDTI	ATGAA	1 cut(s)	1402
TspRI	CASTG	4 cut(s)	48, 827, 971, 1676
Van91I	CCANNNNNTGG	1 cut(s)	627
Vha464I	CTTAAG	1 cut(s)	348
VpaK11BI	GGWCC	4 cut(s)	186, 537, 722, 1555
XapI	RAATTY	5 cut(s)	169, 253, 425, 685, 757
XbaI	TCTAGA	1 cut(s)	836
XceI	RCATGY	1 cut(s)	1727
XcmI	CCANNNNNNNNNTGG	1 cut(s)	769
XhoI	CTCGAG	1 cut(s)	907
XmiI	GTMKAC	2 cut(s)	1319, 1647
XmnI	GAANNNNTTC	1 cut(s)	1660
XspI	CTAG	5 cut(s)	160, 564, 675, 837, 1665
Zsp2I	ATGCAT	1 cut(s)	1408

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.