Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0003051

Physical Location & Seq

Genomic Coordinates Reverse (-)

69870157 .. 69888571

Gene Structure 18415 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG479200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1923 bp

ATGGCCGGTGCGGGAATTCACCCCTACCATCAGCAATGGGCGCCGGCAGCCGCCCCGCCTCCTCCTCCGGCCGTCGTCGCCGCCGCCCCTCCGCCTCCACCTCACCACCTCGTCGACAACCCGAACCGACCCGCCAACGACGAGGTCCGCACCATTTTCATCACCGGTCTTCCCGAAGATGTGAAGGAGAGGGAGATACAGAACCTCCTCCGATGGCTGCCGGGCTACGAGGCCTCCCAGGTCAACTACAAAGGCGAGAAGCCCATGAGCTTCGCGCTCTTCGCCACTGCTCAGCAAGCTATCGCTGCCAAAGACGCTCTTCAGAGTATGGTTTTCGATACGGAATCGAAGGCGGTGTTGCATACGGAGATGGCAAAGAAGAATCTTTTTGTGAAAAGAGGGATTGTAGGGGATTCAAATGCTTATGATCAAAGTAAACGATTGCGTACTGGTGACTACACACAGGCTGGTTATTCCAGTCCGGTGCCTTTTCATCCGCCACCGCCACCTGTTTGGGGACCACACGGGTATATGGCTCCACCACCTCCTCCATATGATCCATATGGTTATCCTGTTGCTCCAGTACCAATGCCCCCTTCTGCTCCTGTACCAGCACCCAGCAGTTATGTACCTGTTCTGAACACAAAAGATAATCCACCATGCAATACCTTATTTATTGGCAATCTAGGAGAGAGCATTAACGAGGAAGAACTGAGGGGCCTATTCAGCTCACAACCTGGATTTAAGCAAATGAAGATCTTGCGACAGGAAAGGCATACTGTTTGCTTCATTGAGTTTGAAGATGTAAACAGTGCCACTGCTGTACACCACAATTTTCAAGGTCAAGGTTTTGCAGCTGCCCTTTTGTTTCAGGGTTTTATTCGTAACGAGCATTTTGATCCAAAAAAATGGATTATACCTGGAGACTTTTCTGTACCTTGTTTATTAAAGGAGGAGTTGCTTTCTAGTGAAAGAAAAATCTACATCAGGGGAACAAGAAAGATAAAAAGAAAGCGTATTGCTGATGTTGTTGAGGCACTTATTGGTGCATTCCTTATTACCGGTGGTGAAATGGCTGCTGTGCACTTCATGAATTGGGTTGTGGAAGCACTAACTCATGGTTCTTACATGCTCCCTGAGATCCCAGGATGTTTTCAGCGGTTAGAATTTCTTGGGGACGCAGTTTTAGATTACCTGATCACTAGTTATCTGTGCAACAAATATCCTGGGATGTCGCCAGGAGTCTTAACTGATATGAGGTCTGCTTCGGTAAATAATGATTGTTTTGCCCGAGCTGCTGTGAAGGCTGAATTGCACAAGCACATTCTCCATGCTTCAAAGAAACTCCTCAAGGATATAGTTCACACAGTTGATAACTTTAAGAAGTTACCTACACAATCAACTTTTGGATGGGAATCTGAGACTTCGTTCCCCAGGGTACTAGGAGATATTATAGAGTCTCTTGGAGGGGCAATTTTTGTTGATTCTGGATACGATAAGAATGTTAAATCAAAATCATTCAAAAATGATATGGCTACCATTACTATTGAGGATGAAGGTAATGGCGTCACATACAAGCATACATCAACAGCTCCTGATAAGTGGACGGCAAGTAAATTAGCAAGCAAAGAAGTTTTGAGGTCCTTGAAAGAGAGTGCTCATTTATCAAAAGACGCTCTCCCATCTTCAAACAACCCCTTCACCACTCCACAACTCGTTTCCTTCACCAAGTCGACTCAGGAAATGTTTTTAAGCCTTCACACAGTCCACACACTTGACTGTGTGAAATTGCTGAATCTAATTATGGTTGATATATTACTCAAACTCAACAATCTTTCCATACCAAGAGGCACGGATGAAGATTTGCTTAAATGTATTGACTATCGAGAAGTCATGGCCAATATAATACAGCGGTTTACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006355 GO:0006357 GO:0007275 GO:0008150 GO:0008284 GO:0009653 GO:0009790 GO:0009887 GO:0009889 GO:0009966 GO:0009968 GO:0010468 GO:0010556 GO:0010646 GO:0010648 GO:0019219 GO:0019222 GO:0023051 GO:0023057 GO:0030510 GO:0030514 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0035239 GO:0035295 GO:0042127 GO:0042802 GO:0042803 GO:0044424 GO:0044464 GO:0045595 GO:0045596 GO:0046983 GO:0048513 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048546 GO:0048557 GO:0048562 GO:0048565 GO:0048566 GO:0048568 GO:0048583 GO:0048585 GO:0048598 GO:0048660 GO:0048661 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051147 GO:0051148 GO:0051150 GO:0051151 GO:0051171 GO:0051252 GO:0055123 GO:0060255 GO:0065007 GO:0080090 GO:0090092 GO:0090101 GO:0090287 GO:0090288 GO:0097159 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1

Protein Analysis

640

Amino Acids

70.92

Weight (kDa)

6.88

Isoelectric Point (pI)

47.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	224 - 283	2.8e-09	RNA recognition motif
Ribonucleas_3_3	PF14622	368 - 500	2.1e-13	Ribonuclease-III-like
Ribonuclease_3	PF00636	386 - 497	6.7e-22	Ribonuclease III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0003051)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21215 AT3G21215 AT3G21215 AT3G21215
fragaria_vesca	FvH4_3g14953 FvH4_3g16432 FvH4_4g15800 FvH4_4g32761 FvH4_5g34521 FvH4_6g16241 FvH4_6g37450 FvH4_6g45392 FvH4_7g15921 FvH4_7g31684
malus_domestica	MD09G1158000.v1.1 MD17G1144000.v1.1
prunus_persica	Prupe.3G168000_v2.0.a1
pyrus_communis	pycom09g07680 pycom17g13730
rosa_chinensis	RchiOBHm_Chr2g0150271 RchiOBHm_Chr2g0150291
rosa_laevigata	RLG00000020483
rosa_multiflora	Rmu_sc0001169.1_g000003 Rmu_sc0020705.1_g000001 Rmu_sc0024000.1_g000001 Rmu_sc0038093.1_g000001 Rmu_sc0040821.1_g000001 Rmu_ssc0000020.1_g000001
rosa_roxburghii	Rroxscaffold_2G00097320 Rroxscaffold_2G00097330
rosa_rugosa	Rorug02G0420200 Rorug02G0420300
rosa_samantha	Rh2AG479200 Rh2BG491500 Rh2CG465400 Rh2DG500300
rosa_wichuraiana	Rw2G038980 Rw2G039110

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	40, 484
AccI	GTMKAC	2 cut(s)	114, 1733
AccII	CGCG	1 cut(s)	275
AclWI	GGATC	3 cut(s)	551, 893, 1135
AcoI	YGGCCR	3 cut(s)	3, 69, 1896
AcsI	RAATTY	2 cut(s)	15, 1166
AcuI	CTGAAG	1 cut(s)	305
AcyI	GRCGYC	2 cut(s)	41, 1566
AfaI	GTAC	7 cut(s)	448, 585, 609, 630, 825, 936, 1440
AfiI	CCNNNNNNNGG	1 cut(s)	515
AgeI	ACCGGT	2 cut(s)	164, 1061
AgsI	TTSAA	7 cut(s)	417, 800, 839, 1338, 1522, 1648, 1689
AhlI	ACTAGT	1 cut(s)	1202
AjnI	CCWGG	7 cut(s)	237, 736, 919, 1144, 1225, 1237, 1433
AjuI	GAANNNNNNNTTGG	2 cut(s)	580, 612
AluBI	AGCT	6 cut(s)	270, 299, 729, 857, 1295, 1592
AluI	AGCT	6 cut(s)	270, 299, 729, 857, 1295, 1592
Alw21I	GWGCWC	2 cut(s)	1086, 1660
Alw26I	GTCTC	3 cut(s)	918, 1415, 1464
Alw44I	GTGCAC	1 cut(s)	1082
AlwI	GGATC	3 cut(s)	551, 893, 1135
AlwNI	CAGNNNCTG	1 cut(s)	1595
Ama87I	CYCGRG	1 cut(s)	1290
AoxI	GGCC	5 cut(s)	3, 69, 231, 718, 1896
ApaLI	GTGCAC	1 cut(s)	1082
ApeKI	GCWGC	7 cut(s)	47, 217, 305, 854, 857, 1076, 1295
ApoI	RAATTY	2 cut(s)	15, 1166
AsiGI	ACCGGT	2 cut(s)	164, 1061
AspLEI	GCGC	2 cut(s)	43, 277
AspS9I	GGNCC	4 cut(s)	145, 518, 718, 1641
AsuC2I	CCSGG	1 cut(s)	222
AsuHPI	GGTGA	7 cut(s)	11, 95, 154, 464, 1079, 1693, 1717
AvaI	CYCGRG	1 cut(s)	1290
AvaII	GGWCC	3 cut(s)	145, 518, 1641
BaeGI	GKGCMC	1 cut(s)	1086
BalI	TGGCCA	1 cut(s)	1898
BanI	GGYRCC	2 cut(s)	40, 484
BbsI	GAAGAC	1 cut(s)	161
Bbv12I	GWGCWC	2 cut(s)	1086, 1660
BbvI	GCAGC	7 cut(s)	59, 204, 292, 844, 866, 1063, 1282
BccI	CCATC	5 cut(s)	36, 207, 364, 1404, 1690
BceAI	ACGGC	2 cut(s)	56, 1623
BciT130I	CCWGG	7 cut(s)	239, 738, 921, 1146, 1227, 1239, 1435
BciVI	GTATCC	1 cut(s)	1484
BclI	TGATCA	2 cut(s)	427, 1197
BcnI	CCSGG	1 cut(s)	222
BcoDI	GTCTC	3 cut(s)	918, 1415, 1464
BcuI	ACTAGT	1 cut(s)	1202
BfaI	CTAG	4 cut(s)	686, 966, 1203, 1442
BfoI	RGCGCY	1 cut(s)	44
BfuI	GTATCC	1 cut(s)	1484
BglII	AGATCT	1 cut(s)	756
BlpI	GCTNAGC	1 cut(s)	291
Bme1390I	CCNGG	8 cut(s)	222, 239, 738, 921, 1146, 1227, 1239, 1435
Bme18I	GGWCC	3 cut(s)	145, 518, 1641
BmeT110I	CYCGRG	1 cut(s)	1290
BmgT120I	GGNCC	4 cut(s)	145, 518, 718, 1641
BmiI	GGNNCC	5 cut(s)	42, 486, 519, 537, 719
BmrFI	CCNGG	8 cut(s)	222, 239, 738, 921, 1146, 1227, 1239, 1435
BpiI	GAAGAC	1 cut(s)	161
BpmI	CTGGAG	2 cut(s)	564, 942
Bpu1102I	GCTNAGC	1 cut(s)	291
BpuEI	CTTGAG	1 cut(s)	1334
BpuMI	CCSGG	1 cut(s)	222
BsaBI	GATNNNNATC	1 cut(s)	1414
BsaHI	GRCGYC	2 cut(s)	41, 1566
BsaJI	CCNNGG	5 cut(s)	237, 1144, 1226, 1433, 1434
BsaWI	WCCGGW	3 cut(s)	164, 481, 1061
BsaXI	ACNNNNNCTCC	4 cut(s)	189, 218, 219, 248
Bsc4I	CCNNNNNNNGG	1 cut(s)	515
Bse118I	RCCGGY	4 cut(s)	5, 43, 164, 1061
Bse1I	ACTGG	3 cut(s)	454, 477, 581
Bse3DI	GCAATG	1 cut(s)	41
Bse8I	GATNNNNATC	1 cut(s)	1414
BseBI	CCWGG	7 cut(s)	239, 738, 921, 1146, 1227, 1239, 1435
BseDI	CCNNGG	5 cut(s)	237, 1144, 1226, 1433, 1434
BseGI	GGATG	6 cut(s)	493, 1154, 1236, 1415, 1558, 1861
BseJI	GATNNNNATC	1 cut(s)	1414
BseLI	CCNNNNNNNGG	1 cut(s)	515
BseMI	GCAATG	1 cut(s)	41
BseMII	CTCAG	5 cut(s)	305, 704, 1128, 1410, 1751
BseNI	ACTGG	3 cut(s)	454, 477, 581
BseRI	GAGGAG	6 cut(s)	51, 54, 197, 537, 968, 1337
BseSI	GKGCMC	1 cut(s)	1086
BseX3I	CGGCCG	1 cut(s)	69
BseXI	GCAGC	7 cut(s)	59, 204, 292, 844, 866, 1063, 1282
BseYI	CCCAGC	1 cut(s)	617
Bsh1236I	CGCG	1 cut(s)	275
Bsh1285I	CGRYCG	1 cut(s)	72
BshFI	GGCC	5 cut(s)	5, 71, 233, 720, 1898
BshNI	GGYRCC	2 cut(s)	40, 484
BshTI	ACCGGT	2 cut(s)	164, 1061
BsiEI	CGRYCG	1 cut(s)	72
BsiHKAI	GWGCWC	2 cut(s)	1086, 1660
BsiHKCI	CYCGRG	1 cut(s)	1290
BsiSI	CCGG	7 cut(s)	6, 44, 68, 165, 221, 482, 1062
BslFI	GGGAC	2 cut(s)	531, 1190
BslI	CCNNNNNNNGG	1 cut(s)	515
BsmAI	GTCTC	3 cut(s)	918, 1415, 1464
BsmFI	GGGAC	2 cut(s)	531, 1190
BsmI	GAATGC	1 cut(s)	1049
BsnI	GGCC	5 cut(s)	5, 71, 233, 720, 1898
BsoBI	CYCGRG	1 cut(s)	1290
Bsp1286I	GDGCHC	2 cut(s)	1086, 1660
Bsp1407I	TGTACA	1 cut(s)	823
Bsp143I	GATC	6 cut(s)	427, 556, 756, 898, 1140, 1197
Bsp1720I	GCTNAGC	1 cut(s)	291
BspANI	GGCC	5 cut(s)	5, 71, 233, 720, 1898
BspCNI	CTCAG	5 cut(s)	304, 705, 1129, 1411, 1750
BspFNI	CGCG	1 cut(s)	275
BspHI	TCATGA	1 cut(s)	1089
BspLI	GGNNCC	5 cut(s)	42, 486, 519, 537, 719
BspPI	GGATC	3 cut(s)	551, 893, 1135
BspQI	GCTCTTC	2 cut(s)	284, 324
BspT107I	GGYRCC	2 cut(s)	40, 484
BsrDI	GCAATG	1 cut(s)	41
BsrFI	RCCGGY	4 cut(s)	5, 43, 164, 1061
BsrGI	TGTACA	1 cut(s)	823
BsrI	ACTGG	3 cut(s)	454, 477, 581
BssAI	RCCGGY	4 cut(s)	5, 43, 164, 1061
BssECI	CCNNGG	5 cut(s)	237, 1144, 1226, 1433, 1434
BssMI	GATC	6 cut(s)	427, 556, 756, 898, 1140, 1197
BssNI	GRCGYC	2 cut(s)	41, 1566
Bst2UI	CCWGG	7 cut(s)	239, 738, 921, 1146, 1227, 1239, 1435
Bst4CI	ACNGT	5 cut(s)	781, 812, 1369, 1765, 1781
Bst6I	CTCTTC	2 cut(s)	284, 324
BstACI	GRCGYC	2 cut(s)	41, 1566
BstAUI	TGTACA	1 cut(s)	823
BstC8I	GCNNGC	3 cut(s)	45, 297, 1624
BstDEI	CTNAG	5 cut(s)	291, 713, 1137, 1419, 1737
BstF5I	GGATG	6 cut(s)	493, 1154, 1236, 1415, 1558, 1861
BstFNI	CGCG	1 cut(s)	275
BstH2I	RGCGCY	1 cut(s)	44
BstHHI	GCGC	2 cut(s)	43, 277
BstKTI	GATC	6 cut(s)	430, 559, 759, 901, 1143, 1200
BstMAI	GTCTC	3 cut(s)	918, 1415, 1464
BstMBI	GATC	6 cut(s)	427, 556, 756, 898, 1140, 1197
BstMCI	CGRYCG	1 cut(s)	72
BstNI	CCWGG	7 cut(s)	239, 738, 921, 1146, 1227, 1239, 1435
BstNSI	RCATGY	1 cut(s)	1132
BstSCI	CCNGG	8 cut(s)	220, 237, 736, 919, 1144, 1225, 1237, 1433
BstSLI	GKGCMC	1 cut(s)	1086
BstUI	CGCG	1 cut(s)	275
BstV1I	GCAGC	7 cut(s)	59, 204, 292, 844, 866, 1063, 1282
BstV2I	GAAGAC	1 cut(s)	161
BstX2I	RGATCY	2 cut(s)	756, 1140
BstXI	CCANNNNNNTGG	2 cut(s)	513, 909
BstYI	RGATCY	2 cut(s)	756, 1140
BstZI	CGGCCG	1 cut(s)	69
BsuI	GTATCC	1 cut(s)	1484
BsuRI	GGCC	5 cut(s)	5, 71, 233, 720, 1898
BtsCI	GGATG	6 cut(s)	493, 1154, 1236, 1415, 1558, 1861
BtsI	GCAGTG	2 cut(s)	285, 816
BtsIMutI	CAGTG	3 cut(s)	285, 816, 817
Cac8I	GCNNGC	3 cut(s)	45, 297, 1624
CaiI	CAGNNNCTG	1 cut(s)	1595
CciI	TCATGA	1 cut(s)	1089
CfoI	GCGC	2 cut(s)	43, 277
Cfr10I	RCCGGY	4 cut(s)	5, 43, 164, 1061
Cfr13I	GGNCC	4 cut(s)	145, 518, 718, 1641
CseI	GACGC	4 cut(s)	323, 1187, 1555, 1682
Csp6I	GTAC	7 cut(s)	447, 584, 608, 629, 824, 935, 1439
CspAI	ACCGGT	2 cut(s)	164, 1061
CviAII	CATG	7 cut(s)	265, 660, 1090, 1118, 1129, 1331, 1894
CviQI	GTAC	7 cut(s)	447, 584, 608, 629, 824, 935, 1439
DdeI	CTNAG	5 cut(s)	291, 713, 1137, 1419, 1737
DinI	GGCGCC	1 cut(s)	42
DpnI	GATC	6 cut(s)	429, 558, 758, 900, 1142, 1199
DpnII	GATC	6 cut(s)	427, 556, 756, 898, 1140, 1197
EaeI	YGGCCR	3 cut(s)	3, 69, 1896
EagI	CGGCCG	1 cut(s)	69
Eam1104I	CTCTTC	2 cut(s)	284, 324
EarI	CTCTTC	2 cut(s)	284, 324
EciI	GGCGGA	2 cut(s)	81, 486
EclXI	CGGCCG	1 cut(s)	69
Eco147I	AGGCCT	1 cut(s)	233
Eco47I	GGWCC	3 cut(s)	145, 518, 1641
Eco52I	CGGCCG	1 cut(s)	69
Eco57I	CTGAAG	1 cut(s)	305
Eco88I	CYCGRG	1 cut(s)	1290
EcoO109I	RGGNCCY	2 cut(s)	718, 1641
EcoRI	GAATTC	1 cut(s)	15
EcoRII	CCWGG	7 cut(s)	237, 736, 919, 1144, 1225, 1237, 1433
EgeI	GGCGCC	1 cut(s)	42
EheI	GGCGCC	1 cut(s)	42
FaeI	CATG	7 cut(s)	268, 663, 1093, 1121, 1132, 1334, 1897
FalI	AAGNNNNNCTT	4 cut(s)	303, 335, 1851, 1883
FaqI	GGGAC	2 cut(s)	531, 1190
FatI	CATG	7 cut(s)	264, 659, 1089, 1117, 1128, 1330, 1893
FauI	CCCGC	3 cut(s)	4, 63, 139
FauNDI	CATATG	2 cut(s)	553, 562
FbaI	TGATCA	2 cut(s)	427, 1197
FblI	GTMKAC	2 cut(s)	114, 1733
FokI	GGATG	6 cut(s)	480, 1161, 1243, 1422, 1565, 1868
FspBI	CTAG	4 cut(s)	686, 966, 1203, 1442
GlaI	GCGC	2 cut(s)	42, 276
GsaI	CCCAGC	1 cut(s)	621
GsuI	CTGGAG	2 cut(s)	564, 942
HaeII	RGCGCY	1 cut(s)	44
HaeIII	GGCC	5 cut(s)	5, 71, 233, 720, 1898
HapII	CCGG	7 cut(s)	6, 44, 68, 165, 221, 482, 1062
HgaI	GACGC	4 cut(s)	323, 1187, 1555, 1682
HhaI	GCGC	2 cut(s)	43, 277
Hin1I	GRCGYC	2 cut(s)	41, 1566
Hin1II	CATG	7 cut(s)	268, 663, 1093, 1121, 1132, 1334, 1897
Hin6I	GCGC	2 cut(s)	41, 275
HinP1I	GCGC	2 cut(s)	41, 275
HincII	GTYRAC	3 cut(s)	115, 244, 1734
HindII	GTYRAC	3 cut(s)	115, 244, 1734
HinfI	GANTC	9 cut(s)	344, 382, 413, 1242, 1415, 1457, 1484, 1735, 1795
HpaII	CCGG	7 cut(s)	6, 44, 68, 165, 221, 482, 1062
HphI	GGTGA	7 cut(s)	11, 95, 154, 464, 1079, 1693, 1717
Hpy188I	TCNGA	4 cut(s)	212, 324, 639, 1420
Hpy188III	TCNNGA	6 cut(s)	173, 1090, 1488, 1595, 1739, 1886
Hpy99I	CGWCG	4 cut(s)	77, 80, 116, 143
HpyAV	CCTTC	8 cut(s)	178, 343, 606, 1297, 1550, 1708, 1732, 1766
HpyCH4III	ACNGT	5 cut(s)	781, 812, 1369, 1765, 1781
HpyCH4V	TGCA	7 cut(s)	361, 663, 854, 1049, 1084, 1215, 1315
HpyF3I	CTNAG	5 cut(s)	291, 713, 1137, 1419, 1737
Hsp92I	GRCGYC	2 cut(s)	41, 1566
Hsp92II	CATG	7 cut(s)	268, 663, 1093, 1121, 1132, 1334, 1897
HspAI	GCGC	2 cut(s)	41, 275
KasI	GGCGCC	1 cut(s)	40
KroI	GCCGGC	1 cut(s)	43
KroNI	GCCGGC	1 cut(s)	45
Ksp22I	TGATCA	2 cut(s)	427, 1197
Kzo9I	GATC	6 cut(s)	427, 556, 756, 898, 1140, 1197
LguI	GCTCTTC	2 cut(s)	284, 324
LmnI	GCTCC	5 cut(s)	541, 583, 607, 1137, 1597
Lsp1109I	GCAGC	7 cut(s)	59, 204, 292, 844, 866, 1063, 1282
MaeI	CTAG	4 cut(s)	686, 966, 1203, 1442
MaeIII	GTNAC	4 cut(s)	452, 884, 1386, 1567
MalI	GATC	6 cut(s)	429, 558, 758, 900, 1142, 1199
MboI	GATC	6 cut(s)	427, 556, 756, 898, 1140, 1197
MflI	RGATCY	2 cut(s)	756, 1140
MhlI	GDGCHC	2 cut(s)	1086, 1660
MlsI	TGGCCA	1 cut(s)	1898
MluCI	AATT	9 cut(s)	15, 832, 1093, 1166, 1310, 1473, 1616, 1787, 1800
MluNI	TGGCCA	1 cut(s)	1898
Mly113I	GGCGCC	1 cut(s)	41
MlyI	GAGTC	3 cut(s)	1251, 1466, 1729
Mox20I	TGGCCA	1 cut(s)	1898
MroNI	GCCGGC	1 cut(s)	43
MscI	TGGCCA	1 cut(s)	1898
MseI	TTAA	8 cut(s)	699, 744, 947, 1247, 1380, 1506, 1751, 1869
Msp20I	TGGCCA	1 cut(s)	1898
MspA1I	CMGCKG	3 cut(s)	857, 1159, 1912
MspI	CCGG	7 cut(s)	6, 44, 68, 165, 221, 482, 1062
MspR9I	CCNGG	8 cut(s)	222, 239, 738, 921, 1146, 1227, 1239, 1435
Mva1269I	GAATGC	1 cut(s)	1049
MvaI	CCWGG	7 cut(s)	239, 738, 921, 1146, 1227, 1239, 1435
MvnI	CGCG	1 cut(s)	275
NaeI	GCCGGC	1 cut(s)	45
NarI	GGCGCC	1 cut(s)	41
NciI	CCSGG	1 cut(s)	222
NdeI	CATATG	2 cut(s)	553, 562
NdeII	GATC	6 cut(s)	427, 556, 756, 898, 1140, 1197
NgoMIV	GCCGGC	1 cut(s)	43
NlaIII	CATG	7 cut(s)	268, 663, 1093, 1121, 1132, 1334, 1897
NlaIV	GGNNCC	5 cut(s)	42, 486, 519, 537, 719
NmuCI	GTSAC	2 cut(s)	452, 1567
NspI	RCATGY	1 cut(s)	1132
PagI	TCATGA	1 cut(s)	1089
PasI	CCCWGGG	1 cut(s)	1434
PceI	AGGCCT	1 cut(s)	233
PciSI	GCTCTTC	2 cut(s)	284, 324
PctI	GAATGC	1 cut(s)	1049
PdiI	GCCGGC	1 cut(s)	45
PfeI	GAWTC	6 cut(s)	344, 382, 413, 1415, 1484, 1795
PflFI	GACNNNGTC	1 cut(s)	143
PinAI	ACCGGT	2 cut(s)	164, 1061
PleI	GAGTC	3 cut(s)	1250, 1465, 1729
PluTI	GGCGCC	1 cut(s)	44
PpsI	GAGTC	3 cut(s)	1250, 1465, 1729
PpuMI	RGGWCCY	1 cut(s)	1641
Psp5II	RGGWCCY	1 cut(s)	1641
Psp6I	CCWGG	7 cut(s)	237, 736, 919, 1144, 1225, 1237, 1433
PspFI	CCCAGC	1 cut(s)	617
PspGI	CCWGG	7 cut(s)	237, 736, 919, 1144, 1225, 1237, 1433
PspN4I	GGNNCC	5 cut(s)	42, 486, 519, 537, 719
PspPI	GGNCC	4 cut(s)	145, 518, 718, 1641
PspPPI	RGGWCCY	1 cut(s)	1641
PstNI	CAGNNNCTG	1 cut(s)	1595
PsuI	RGATCY	2 cut(s)	756, 1140
PsyI	GACNNNGTC	1 cut(s)	143
PvuII	CAGCTG	1 cut(s)	857
RsaI	GTAC	7 cut(s)	448, 585, 609, 630, 825, 936, 1440
RsaNI	GTAC	7 cut(s)	447, 584, 608, 629, 824, 935, 1439
SalI	GTCGAC	2 cut(s)	113, 1732
SapI	GCTCTTC	2 cut(s)	284, 324
SaqAI	TTAA	8 cut(s)	699, 744, 947, 1247, 1380, 1506, 1751, 1869
Sau3AI	GATC	6 cut(s)	427, 556, 756, 898, 1140, 1197
Sau96I	GGNCC	4 cut(s)	145, 518, 718, 1641
SchI	GAGTC	3 cut(s)	1251, 1466, 1729
ScrFI	CCNGG	8 cut(s)	222, 239, 738, 921, 1146, 1227, 1239, 1435
SduI	GDGCHC	2 cut(s)	1086, 1660
SfoI	GGCGCC	1 cut(s)	42
SinI	GGWCC	3 cut(s)	145, 518, 1641
SmlI	CTYRAG	1 cut(s)	1349
SmoI	CTYRAG	1 cut(s)	1349
SpeI	ACTAGT	1 cut(s)	1202
Sse9I	AATT	9 cut(s)	15, 832, 1093, 1166, 1310, 1473, 1616, 1787, 1800
SseBI	AGGCCT	1 cut(s)	233
SspDI	GGCGCC	1 cut(s)	40
SspMI	CTAG	4 cut(s)	686, 966, 1203, 1442
StuI	AGGCCT	1 cut(s)	233
StyD4I	CCNGG	8 cut(s)	220, 237, 736, 919, 1144, 1225, 1237, 1433
TaaI	ACNGT	5 cut(s)	781, 812, 1369, 1765, 1781
TaqI	TCGA	5 cut(s)	114, 336, 347, 1733, 1885
TasI	AATT	9 cut(s)	15, 832, 1093, 1166, 1310, 1473, 1616, 1787, 1800
TatI	WGTACW	1 cut(s)	823
TauI	GCSGC	3 cut(s)	53, 83, 86
TfiI	GAWTC	6 cut(s)	344, 382, 413, 1415, 1484, 1795
Tru1I	TTAA	8 cut(s)	699, 744, 947, 1247, 1380, 1506, 1751, 1869
Tru9I	TTAA	8 cut(s)	699, 744, 947, 1247, 1380, 1506, 1751, 1869
TscAI	CASTG	3 cut(s)	292, 817, 823
TseFI	GTSAC	2 cut(s)	452, 1567
TseI	GCWGC	7 cut(s)	47, 217, 305, 854, 857, 1076, 1295
Tsp45I	GTSAC	2 cut(s)	452, 1567
TspDTI	ATGAA	8 cut(s)	148, 482, 767, 778, 1078, 1106, 1569, 1872
TspGWI	ACGGA	3 cut(s)	356, 380, 1868
TspRI	CASTG	3 cut(s)	292, 817, 823
Tth111I	GACNNNGTC	1 cut(s)	143
VneI	GTGCAC	1 cut(s)	1082
VpaK11BI	GGWCC	3 cut(s)	145, 518, 1641
XapI	RAATTY	2 cut(s)	15, 1166
XceI	RCATGY	1 cut(s)	1132
XmiI	GTMKAC	2 cut(s)	114, 1733
XspI	CTAG	4 cut(s)	686, 966, 1203, 1442

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.