Prupe.4G028300_v2.0.a1

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
1329369 .. 1330328
960 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G028300.1

Sequence Viewer

Length: 474 bp
ATGGCTCCTGAGTATGTAATTCATGGTCGCTTTTCTGTCAAAACGGATGTCTTCAGTTTTGGGGTGTTAGTTCTTGAAATTGTAAGCGGTAAAAAGACTGGTAGTTTCCGATATGGCGAGAATGAAGAGGACCTATTAACCTATGCCTGGAGAAATTGGAGGGAGGATACAATTCAAAACATCATAGATCCCGTGTTGACGACAAGTTCACAAATCGAAACGATGAGATGCATCCACATTGGTTTACTGTGTGTGCAAGAGAATGGGGTGGACAGGCCAACCGTAGCTTCAGTTGTATCCATGCTTAACAGCGAGTCTCTCGCACTTCCAGTACCCTCACAACCTGCATTCTATATGCATCACAACACTGGATCAGACATATCTGGACTGACAGAGTCAGACCAATCCAAAAGCCTCTCTGTCCATGTCACAGAAAATGACCCTTCAAATATTACTGAAGCATATCCTCACTAA

Protein Analysis

158

Amino Acids

17.44

Weight (kDa)

4.87

Isoelectric Point (pI)

60.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 352
AciI CCGC 1 cut(s) 87
AclWI GGATC 2 cut(s) 182, 379
AcuI CTGAAG 2 cut(s) 37, 273
AfaI GTAC 1 cut(s) 333
AfiI CCNNNNNNNGG 1 cut(s) 147
AgsI TTSAA 3 cut(s) 77, 176, 447
AjnI CCWGG 1 cut(s) 146
AjuI GAANNNNNNNTTGG 2 cut(s) 271, 303
AluBI AGCT 1 cut(s) 287
AluI AGCT 1 cut(s) 287
Alw26I GTCTC 1 cut(s) 321
AlwI GGATC 2 cut(s) 182, 379
AoxI GGCC 1 cut(s) 275
ArsI GACNNNNNNTTYG 2 cut(s) 33, 65
AspS9I GGNCC 1 cut(s) 130
AvaII GGWCC 1 cut(s) 130
BbsI GAAGAC 1 cut(s) 43
BciT130I CCWGG 1 cut(s) 148
BciVI GTATCC 2 cut(s) 160, 307
BcoDI GTCTC 1 cut(s) 321
BfuAI ACCTGC 1 cut(s) 352
BfuI GTATCC 2 cut(s) 160, 307
Bme1390I CCNGG 1 cut(s) 148
Bme18I GGWCC 1 cut(s) 130
BmgT120I GGNCC 1 cut(s) 130
BmiI GGNNCC 1 cut(s) 6
BmrFI CCNGG 1 cut(s) 148
BmsI GCATC 3 cut(s) 218, 240, 367
BpiI GAAGAC 1 cut(s) 43
BpmI CTGGAG 1 cut(s) 169
Bsc4I CCNNNNNNNGG 1 cut(s) 147
Bse1I ACTGG 3 cut(s) 103, 329, 373
BseBI CCWGG 1 cut(s) 148
BseGI GGATG 2 cut(s) 52, 231
BseLI CCNNNNNNNGG 1 cut(s) 147
BseNI ACTGG 3 cut(s) 103, 329, 373
BshFI GGCC 1 cut(s) 277
BslI CCNNNNNNNGG 1 cut(s) 147
BsmAI GTCTC 1 cut(s) 321
BsmI GAATGC 1 cut(s) 347
BsnI GGCC 1 cut(s) 277
Bsp143I GATC 2 cut(s) 187, 371
BspACI CCGC 1 cut(s) 87
BspANI GGCC 1 cut(s) 277
BspLI GGNNCC 1 cut(s) 6
BspMI ACCTGC 1 cut(s) 352
BspPI GGATC 2 cut(s) 182, 379
BsrI ACTGG 3 cut(s) 103, 329, 373
BssMI GATC 2 cut(s) 187, 371
Bst2UI CCWGG 1 cut(s) 148
Bst4CI ACNGT 2 cut(s) 249, 283
Bst6I CTCTTC 1 cut(s) 120
BstDEI CTNAG 1 cut(s) 9
BstF5I GGATG 2 cut(s) 52, 231
BstKTI GATC 2 cut(s) 190, 374
BstMAI GTCTC 1 cut(s) 321
BstMBI GATC 2 cut(s) 187, 371
BstNI CCWGG 1 cut(s) 148
BstSCI CCNGG 1 cut(s) 146
BstV2I GAAGAC 1 cut(s) 43
BstX2I RGATCY 1 cut(s) 187
BstYI RGATCY 1 cut(s) 187
BsuI GTATCC 2 cut(s) 160, 307
BsuRI GGCC 1 cut(s) 277
BtsCI GGATG 2 cut(s) 52, 231
BtsIMutI CAGTG 1 cut(s) 366
BveI ACCTGC 1 cut(s) 352
Cfr13I GGNCC 1 cut(s) 130
Csp6I GTAC 1 cut(s) 332
CviAII CATG 3 cut(s) 23, 301, 425
CviJI RGCY 4 cut(s) 5, 277, 287, 414
CviKI_1 RGCY 4 cut(s) 5, 277, 287, 414
CviQI GTAC 1 cut(s) 332
DdeI CTNAG 1 cut(s) 9
DpnI GATC 2 cut(s) 189, 373
DpnII GATC 2 cut(s) 187, 371
Eam1104I CTCTTC 1 cut(s) 120
EarI CTCTTC 1 cut(s) 120
Eco47I GGWCC 1 cut(s) 130
Eco57I CTGAAG 2 cut(s) 37, 273
EcoO109I RGGNCCY 1 cut(s) 130
EcoRII CCWGG 1 cut(s) 146
EcoT22I ATGCAT 2 cut(s) 233, 360
FaeI CATG 3 cut(s) 26, 304, 428
FatI CATG 3 cut(s) 22, 300, 424
FokI GGATG 2 cut(s) 59, 218
GsuI CTGGAG 1 cut(s) 169
HaeIII GGCC 1 cut(s) 277
Hin1II CATG 3 cut(s) 26, 304, 428
HincII GTYRAC 1 cut(s) 198
HindII GTYRAC 1 cut(s) 198
HinfI GANTC 2 cut(s) 314, 395
Hpy166II GTNNAC 4 cut(s) 198, 209, 245, 271
Hpy188I TCNGA 3 cut(s) 110, 376, 400
Hpy188III TCNNGA 3 cut(s) 8, 74, 384
Hpy8I GTNNAC 4 cut(s) 198, 209, 245, 271
HpyAV CCTTC 1 cut(s) 453
HpyCH4III ACNGT 2 cut(s) 249, 283
HpyCH4V TGCA 4 cut(s) 231, 256, 347, 358
HpyF3I CTNAG 1 cut(s) 9
Hsp92II CATG 3 cut(s) 26, 304, 428
Kzo9I GATC 2 cut(s) 187, 371
LmnI GCTCC 1 cut(s) 10
LpnPI CCDG 9 cut(s) 21, 84, 133, 160, 259, 342, 354, 357, 369
LweI GCATC 3 cut(s) 218, 240, 367
MaeIII GTNAC 1 cut(s) 427
MalI GATC 2 cut(s) 189, 373
MboI GATC 2 cut(s) 187, 371
MboII GAAGA 2 cut(s) 43, 137
MflI RGATCY 1 cut(s) 187
MluCI AATT 4 cut(s) 18, 78, 154, 171
MlyI GAGTC 2 cut(s) 323, 404
MnlI CCTC 5 cut(s) 121, 153, 157, 346, 425
Mph1103I ATGCAT 2 cut(s) 233, 360
MseI TTAA 2 cut(s) 137, 306
MspR9I CCNGG 1 cut(s) 148
Mva1269I GAATGC 1 cut(s) 347
MvaI CCWGG 1 cut(s) 148
NdeII GATC 2 cut(s) 187, 371
NlaIII CATG 3 cut(s) 26, 304, 428
NlaIV GGNNCC 1 cut(s) 6
NmuCI GTSAC 1 cut(s) 427
NsiI ATGCAT 2 cut(s) 233, 360
PctI GAATGC 1 cut(s) 347
PflFI GACNNNGTC 1 cut(s) 394
PleI GAGTC 2 cut(s) 322, 403
PpsI GAGTC 2 cut(s) 322, 403
PpuMI RGGWCCY 1 cut(s) 130
Psp5II RGGWCCY 1 cut(s) 130
Psp6I CCWGG 1 cut(s) 146
PspGI CCWGG 1 cut(s) 146
PspN4I GGNNCC 1 cut(s) 6
PspPI GGNCC 1 cut(s) 130
PspPPI RGGWCCY 1 cut(s) 130
PsuI RGATCY 1 cut(s) 187
PsyI GACNNNGTC 1 cut(s) 394
RsaI GTAC 1 cut(s) 333
RsaNI GTAC 1 cut(s) 332
SaqAI TTAA 2 cut(s) 137, 306
Sau3AI GATC 2 cut(s) 187, 371
Sau96I GGNCC 1 cut(s) 130
SchI GAGTC 2 cut(s) 323, 404
ScrFI CCNGG 1 cut(s) 148
SetI ASST 4 cut(s) 135, 143, 289, 346
SfaNI GCATC 3 cut(s) 218, 240, 367
SinI GGWCC 1 cut(s) 130
Sse9I AATT 4 cut(s) 18, 78, 154, 171
SsiI CCGC 1 cut(s) 87
SspI AATATT 1 cut(s) 451
StyD4I CCNGG 1 cut(s) 146
TaaI ACNGT 2 cut(s) 249, 283
TaqI TCGA 1 cut(s) 216
TasI AATT 4 cut(s) 18, 78, 154, 171
Tru1I TTAA 2 cut(s) 137, 306
Tru9I TTAA 2 cut(s) 137, 306
TscAI CASTG 1 cut(s) 373
TseFI GTSAC 1 cut(s) 427
Tsp45I GTSAC 1 cut(s) 427
TspDTI ATGAA 2 cut(s) 11, 138
TspGWI ACGGA 1 cut(s) 59
TspRI CASTG 1 cut(s) 373
Tth111I GACNNNGTC 1 cut(s) 394
VpaK11BI GGWCC 1 cut(s) 130
Zsp2I ATGCAT 2 cut(s) 233, 360
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.