Prupe.4G248200_v2.0.a1

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0001429
Physical Location & Seq
Forward (+)
16530375 .. 16534967
4593 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G248200.1

Sequence Viewer

Length: 1074 bp
ATGGCTGAATCTTCTTCCACTATTGCTAAGCCCAAGATAGAGTTAGGATCCAAAACTGTCCAAGAGCTGCTCCTGCTCGCCAAAGGGGAACAACAAGTGCCTGAGAAATATATCCATAAAGTTGGAGCCCCAGATGCTTCTTCTGTCCAGTTGAAGGATATTCCAGTAATTGATCTTGGCCTCCTCCTCACACCTTCCTTAATCACTGAACAACAACTTGACAATTTTCGATCAGCTCTTACCACATGGGGTTGCTTTCAGGTAATAAATCATGGCATGACACCTGAATTTCTAGACAAGGTCCGCGAAATGACAAAACAATTTTTTGCACTTCCAGTGGAAGAGAAGCAGAAATACTTGAGACAAGTCAACGATATTCAAGGATATGGGAACGACACGGTTTTTTCTGAACAACAAACACTTGATTGGTCTGACCGGCTATACCTTTCTGTATATCCAGAAGAGCACCGAAAGCTCAAATTTTGGCCTCAAAATCCCAAATCTTTTAGTGAAACTTTAGACCAATATACGATGAAGTTACAAGTGGTAACAAAAACTGTCCTCGAGGCCATGGCAAGGTCATTGAATTTGGATGTTAATTGCTTTCGGGACCTGTATGGAGAACATGGGAAAATGGATGTGAGGTTTAACTTTTATCCTCCTTGTTCAAGGCCTGATGTTGTCCTAGGTGTCAAACCACATGCAGACGCAACTTTAATCACCCATGTCTTGCAAGACAAACAAGTCGAAGGTCTTCAGTTTCTTAAAGACGATCAGTGGTTTAGAGCTCCCATTATTCCTGAGGCGCTTCTCATTAATGTCGGCGATCAGGCAGAGATATTGAGCAATGGAATATTGAAGAGCCCTGTACACAGGGTAGTCATAAATCCAGACACGGAGAGGATCTCTTTGGCTGCCTTCTGCATGCCTGAATCAGATAAAGAGATTGAACCCTTTGAAAGCCTGGTCAATGAGTCAACGCCAAGATTGTACAACAAGGTGAAAAATTATGATAGCATATATTTCGAATACTACCAGCAAGGAAGGAGACCAATTGAAGCATCAAAAATTTAA

Protein Analysis

358

Amino Acids

40.9

Weight (kDa)

5.42

Isoelectric Point (pI)

43.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 743
AbsI CCTCGAGG 1 cut(s) 563
AccII CGCG 1 cut(s) 306
AciI CCGC 1 cut(s) 304
AclWI GGATC 3 cut(s) 42, 55, 911
AcsI RAATTY 4 cut(s) 287, 479, 586, 1068
AcuI CTGAAG 1 cut(s) 740
AfaI GTAC 2 cut(s) 870, 992
AfiI CCNNNNNNNGG 2 cut(s) 154, 576
AgsI TTSAA 8 cut(s) 154, 380, 586, 669, 859, 950, 959, 1058
AjnI CCWGG 1 cut(s) 963
AluBI AGCT 4 cut(s) 67, 236, 475, 788
AluI AGCT 4 cut(s) 67, 236, 475, 788
Alw21I GWGCWC 2 cut(s) 468, 790
Alw26I GTCTC 2 cut(s) 355, 1042
AlwI GGATC 3 cut(s) 42, 55, 911
Ama87I CYCGRG 1 cut(s) 563
AoxI GGCC 4 cut(s) 178, 485, 567, 671
ApeKI GCWGC 2 cut(s) 67, 914
ApoI RAATTY 4 cut(s) 287, 479, 586, 1068
AseI ATTAAT 1 cut(s) 816
Asp700I GAANNNNTTC 1 cut(s) 753
AspA2I CCTAGG 1 cut(s) 685
AspLEI GCGC 1 cut(s) 808
AspS9I GGNCC 2 cut(s) 301, 610
AsuHPI GGTGA 2 cut(s) 712, 1012
AsuII TTCGAA 1 cut(s) 1026
AvaI CYCGRG 1 cut(s) 563
AvaII GGWCC 2 cut(s) 301, 610
AvrII CCTAGG 1 cut(s) 685
AxyI CCTNAGG 1 cut(s) 801
BamHI GGATCC 1 cut(s) 47
BanII GRGCYC 3 cut(s) 130, 790, 866
BarI GAAGNNNNNNTAC 2 cut(s) 338, 370
BbsI GAAGAC 1 cut(s) 746
Bbv12I GWGCWC 2 cut(s) 468, 790
BbvI GCAGC 2 cut(s) 54, 901
BcgI CGANNNNNNTGC 2 cut(s) 1006, 1040
BciT130I CCWGG 1 cut(s) 965
BcoDI GTCTC 2 cut(s) 355, 1042
BfaI CTAG 2 cut(s) 293, 686
BfoI RGCGCY 1 cut(s) 809
BisI GCNGC 2 cut(s) 68, 915
BlnI CCTAGG 1 cut(s) 685
BlpI GCTNAGC 1 cut(s) 27
BlsI GCNGC 2 cut(s) 69, 916
Bme1390I CCNGG 1 cut(s) 965
Bme18I GGWCC 2 cut(s) 301, 610
BmeT110I CYCGRG 1 cut(s) 563
BmgT120I GGNCC 2 cut(s) 301, 610
BmiI GGNNCC 3 cut(s) 49, 127, 611
BmrFI CCNGG 1 cut(s) 965
BmsI GCATC 2 cut(s) 124, 1070
BpiI GAAGAC 1 cut(s) 746
BplI GAGNNNNNCTC 2 cut(s) 890, 922
Bpu1102I GCTNAGC 1 cut(s) 27
Bpu14I TTCGAA 1 cut(s) 1026
BpuEI CTTGAG 1 cut(s) 379
BsaI GGTCTC 1 cut(s) 1042
BsaJI CCNNGG 2 cut(s) 570, 685
Bsc4I CCNNNNNNNGG 2 cut(s) 154, 576
Bse118I RCCGGY 1 cut(s) 435
Bse1I ACTGG 3 cut(s) 148, 164, 335
Bse21I CCTNAGG 1 cut(s) 801
Bse3DI GCAATG 1 cut(s) 853
BseBI CCWGG 1 cut(s) 965
BseDI CCNNGG 2 cut(s) 570, 685
BseGI GGATG 2 cut(s) 598, 643
BseLI CCNNNNNNNGG 2 cut(s) 154, 576
BseMI GCAATG 1 cut(s) 853
BseMII CTCAG 2 cut(s) 93, 792
BseNI ACTGG 3 cut(s) 148, 164, 335
BseRI GAGGAG 2 cut(s) 173, 176
BseXI GCAGC 2 cut(s) 54, 901
Bsh1236I CGCG 1 cut(s) 306
BshFI GGCC 4 cut(s) 180, 487, 569, 673
BsiHKAI GWGCWC 2 cut(s) 468, 790
BsiHKCI CYCGRG 1 cut(s) 563
BsiSI CCGG 1 cut(s) 436
BslFI GGGAC 1 cut(s) 623
BslI CCNNNNNNNGG 2 cut(s) 154, 576
BsmAI GTCTC 2 cut(s) 355, 1042
BsmFI GGGAC 1 cut(s) 623
BsnI GGCC 4 cut(s) 180, 487, 569, 673
Bso31I GGTCTC 1 cut(s) 1042
BsoBI CYCGRG 1 cut(s) 563
Bsp119I TTCGAA 1 cut(s) 1026
Bsp1286I GDGCHC 4 cut(s) 130, 468, 790, 866
Bsp1407I TGTACA 2 cut(s) 868, 990
Bsp143I GATC 6 cut(s) 47, 172, 230, 772, 826, 903
Bsp1720I GCTNAGC 1 cut(s) 27
Bsp19I CCATGG 1 cut(s) 570
BspACI CCGC 1 cut(s) 304
BspANI GGCC 4 cut(s) 180, 487, 569, 673
BspCNI CTCAG 2 cut(s) 94, 793
BspFNI CGCG 1 cut(s) 306
BspLI GGNNCC 3 cut(s) 49, 127, 611
BspPI GGATC 3 cut(s) 42, 55, 911
BspQI GCTCTTC 2 cut(s) 456, 854
BspT104I TTCGAA 1 cut(s) 1026
BspTNI GGTCTC 1 cut(s) 1042
BsrDI GCAATG 1 cut(s) 853
BsrFI RCCGGY 1 cut(s) 435
BsrGI TGTACA 2 cut(s) 868, 990
BsrI ACTGG 3 cut(s) 148, 164, 335
BssAI RCCGGY 1 cut(s) 435
BssECI CCNNGG 2 cut(s) 570, 685
BssMI GATC 6 cut(s) 47, 172, 230, 772, 826, 903
BssT1I CCWWGG 2 cut(s) 570, 685
Bst2UI CCWGG 1 cut(s) 965
Bst4CI ACNGT 3 cut(s) 58, 400, 559
Bst6I CTCTTC 3 cut(s) 336, 456, 854
BstAUI TGTACA 2 cut(s) 868, 990
BstBI TTCGAA 1 cut(s) 1026
BstC8I GCNNGC 2 cut(s) 78, 926
BstDEI CTNAG 3 cut(s) 27, 102, 801
BstDSI CCRYGG 1 cut(s) 570
BstF5I GGATG 2 cut(s) 598, 643
BstFNI CGCG 1 cut(s) 306
BstH2I RGCGCY 1 cut(s) 809
BstHHI GCGC 1 cut(s) 808
BstKTI GATC 6 cut(s) 50, 175, 233, 775, 829, 906
BstMAI GTCTC 2 cut(s) 355, 1042
BstMBI GATC 6 cut(s) 47, 172, 230, 772, 826, 903
BstMWI GCNNNNNNNGC 3 cut(s) 73, 134, 472
BstNI CCWGG 1 cut(s) 965
BstNSI RCATGY 2 cut(s) 704, 928
BstSCI CCNGG 1 cut(s) 963
BstUI CGCG 1 cut(s) 306
BstV1I GCAGC 2 cut(s) 54, 901
BstV2I GAAGAC 1 cut(s) 746
BstX2I RGATCY 2 cut(s) 47, 903
BstXI CCANNNNNNTGG 1 cut(s) 122
BstYI RGATCY 2 cut(s) 47, 903
Bsu36I CCTNAGG 1 cut(s) 801
BsuRI GGCC 4 cut(s) 180, 487, 569, 673
BtgI CCRYGG 1 cut(s) 570
BtsCI GGATG 2 cut(s) 598, 643
BtsIMutI CAGTG 3 cut(s) 204, 342, 782
Cac8I GCNNGC 2 cut(s) 78, 926
CfoI GCGC 1 cut(s) 808
Cfr10I RCCGGY 1 cut(s) 435
Cfr13I GGNCC 2 cut(s) 301, 610
CseI GACGC 1 cut(s) 716
Csp6I GTAC 2 cut(s) 869, 991
CviAII CATG 8 cut(s) 246, 272, 277, 571, 626, 701, 725, 925
CviQI GTAC 2 cut(s) 869, 991
DdeI CTNAG 3 cut(s) 27, 102, 801
DpnI GATC 6 cut(s) 49, 174, 232, 774, 828, 905
DpnII GATC 6 cut(s) 47, 172, 230, 772, 826, 903
DrdI GACNNNNNNGTC 1 cut(s) 743
DseDI GACNNNNNNGTC 1 cut(s) 743
Eam1104I CTCTTC 3 cut(s) 336, 456, 854
EarI CTCTTC 3 cut(s) 336, 456, 854
Ecl136II GAGCTC 1 cut(s) 788
Eco130I CCWWGG 2 cut(s) 570, 685
Eco147I AGGCCT 1 cut(s) 673
Eco24I GRGCYC 3 cut(s) 130, 790, 866
Eco31I GGTCTC 1 cut(s) 1042
Eco47I GGWCC 2 cut(s) 301, 610
Eco53kI GAGCTC 1 cut(s) 788
Eco57I CTGAAG 1 cut(s) 740
Eco81I CCTNAGG 1 cut(s) 801
Eco88I CYCGRG 1 cut(s) 563
EcoICRI GAGCTC 1 cut(s) 788
EcoO109I RGGNCCY 1 cut(s) 610
EcoRII CCWGG 1 cut(s) 963
EcoT14I CCWWGG 2 cut(s) 570, 685
EcoT38I GRGCYC 3 cut(s) 130, 790, 866
ErhI CCWWGG 2 cut(s) 570, 685
FaeI CATG 8 cut(s) 249, 275, 280, 574, 629, 704, 728, 928
FaqI GGGAC 1 cut(s) 623
FatI CATG 8 cut(s) 245, 271, 276, 570, 625, 700, 724, 924
Fnu4HI GCNGC 2 cut(s) 68, 915
FokI GGATG 2 cut(s) 605, 650
FriOI GRGCYC 3 cut(s) 130, 790, 866
Fsp4HI GCNGC 2 cut(s) 68, 915
FspBI CTAG 2 cut(s) 293, 686
GlaI GCGC 1 cut(s) 807
GluI GCNGC 2 cut(s) 68, 915
HaeII RGCGCY 1 cut(s) 809
HaeIII GGCC 4 cut(s) 180, 487, 569, 673
HapII CCGG 1 cut(s) 436
HgaI GACGC 1 cut(s) 716
HhaI GCGC 1 cut(s) 808
Hin1II CATG 8 cut(s) 249, 275, 280, 574, 629, 704, 728, 928
Hin6I GCGC 1 cut(s) 806
HinP1I GCGC 1 cut(s) 806
HincII GTYRAC 2 cut(s) 370, 978
HindII GTYRAC 2 cut(s) 370, 978
HinfI GANTC 3 cut(s) 8, 932, 974
HpaII CCGG 1 cut(s) 436
HphI GGTGA 2 cut(s) 712, 1012
Hpy166II GTNNAC 3 cut(s) 370, 871, 978
Hpy188I TCNGA 3 cut(s) 409, 433, 937
Hpy188III TCNNGA 5 cut(s) 293, 458, 608, 800, 890
Hpy8I GTNNAC 3 cut(s) 370, 871, 978
HpyAV CCTTC 5 cut(s) 148, 204, 743, 928, 1038
HpyCH4III ACNGT 3 cut(s) 58, 400, 559
HpyCH4V TGCA 4 cut(s) 329, 704, 733, 924
HpyF10VI GCNNNNNNNGC 3 cut(s) 73, 134, 472
HpyF3I CTNAG 3 cut(s) 27, 102, 801
Hsp92II CATG 8 cut(s) 249, 275, 280, 574, 629, 704, 728, 928
HspAI GCGC 1 cut(s) 806
Kzo9I GATC 6 cut(s) 47, 172, 230, 772, 826, 903
LguI GCTCTTC 2 cut(s) 456, 854
LmnI GCTCC 3 cut(s) 75, 125, 793
Lsp1109I GCAGC 2 cut(s) 54, 901
LweI GCATC 2 cut(s) 124, 1070
MaeI CTAG 2 cut(s) 293, 686
MaeIII GTNAC 2 cut(s) 537, 547
MalI GATC 6 cut(s) 49, 174, 232, 774, 828, 905
MboI GATC 6 cut(s) 47, 172, 230, 772, 826, 903
MboII GAAGA 7 cut(s) 3, 6, 132, 353, 473, 746, 871
MfeI CAATTG 1 cut(s) 1053
MflI RGATCY 2 cut(s) 47, 903
MhlI GDGCHC 4 cut(s) 130, 468, 790, 866
MlyI GAGTC 1 cut(s) 983
MmeI TCCRAC 1 cut(s) 103
MroXI GAANNNNTTC 1 cut(s) 753
MseI TTAA 7 cut(s) 200, 597, 648, 716, 765, 816, 1072
MspI CCGG 1 cut(s) 436
MspR9I CCNGG 1 cut(s) 965
MunI CAATTG 1 cut(s) 1053
MvaI CCWGG 1 cut(s) 965
MvnI CGCG 1 cut(s) 306
MwoI GCNNNNNNNGC 3 cut(s) 73, 134, 472
NcoI CCATGG 1 cut(s) 570
NdeII GATC 6 cut(s) 47, 172, 230, 772, 826, 903
NlaIII CATG 8 cut(s) 249, 275, 280, 574, 629, 704, 728, 928
NlaIV GGNNCC 3 cut(s) 49, 127, 611
NspI RCATGY 2 cut(s) 704, 928
NspV TTCGAA 1 cut(s) 1026
PaeI GCATGC 1 cut(s) 928
PaeR7I CTCGAG 1 cut(s) 563
PceI AGGCCT 1 cut(s) 673
PciSI GCTCTTC 2 cut(s) 456, 854
PdmI GAANNNNTTC 1 cut(s) 753
PfeI GAWTC 2 cut(s) 8, 932
PflFI GACNNNGTC 1 cut(s) 299
PkrI GCNGC 2 cut(s) 69, 916
PleI GAGTC 1 cut(s) 982
PpsI GAGTC 1 cut(s) 982
PpuMI RGGWCCY 1 cut(s) 610
PshBI ATTAAT 1 cut(s) 816
Psp124BI GAGCTC 1 cut(s) 790
Psp5II RGGWCCY 1 cut(s) 610
Psp6I CCWGG 1 cut(s) 963
PspGI CCWGG 1 cut(s) 963
PspN4I GGNNCC 3 cut(s) 49, 127, 611
PspPI GGNCC 2 cut(s) 301, 610
PspPPI RGGWCCY 1 cut(s) 610
PspXI VCTCGAGB 1 cut(s) 563
PsuI RGATCY 2 cut(s) 47, 903
PsyI GACNNNGTC 1 cut(s) 299
RsaI GTAC 2 cut(s) 870, 992
RsaNI GTAC 2 cut(s) 869, 991
SacI GAGCTC 1 cut(s) 790
SapI GCTCTTC 2 cut(s) 456, 854
SaqAI TTAA 7 cut(s) 200, 597, 648, 716, 765, 816, 1072
SatI GCNGC 2 cut(s) 68, 915
Sau3AI GATC 6 cut(s) 47, 172, 230, 772, 826, 903
Sau96I GGNCC 2 cut(s) 301, 610
SchI GAGTC 1 cut(s) 983
ScrFI CCNGG 1 cut(s) 965
SduI GDGCHC 4 cut(s) 130, 468, 790, 866
SfaNI GCATC 2 cut(s) 124, 1070
Sfr274I CTCGAG 1 cut(s) 563
SfuI TTCGAA 1 cut(s) 1026
SinI GGWCC 2 cut(s) 301, 610
SlaI CTCGAG 1 cut(s) 563
SmlI CTYRAG 2 cut(s) 358, 563
SmoI CTYRAG 2 cut(s) 358, 563
SphI GCATGC 1 cut(s) 928
SseBI AGGCCT 1 cut(s) 673
SsiI CCGC 1 cut(s) 304
SspI AATATT 1 cut(s) 855
SspMI CTAG 2 cut(s) 293, 686
SstI GAGCTC 1 cut(s) 790
StuI AGGCCT 1 cut(s) 673
StyD4I CCNGG 1 cut(s) 963
StyI CCWWGG 2 cut(s) 570, 685
TaaI ACNGT 3 cut(s) 58, 400, 559
TaqI TCGA 4 cut(s) 229, 564, 747, 1026
TatI WGTACW 2 cut(s) 868, 990
TfiI GAWTC 2 cut(s) 8, 932
Tru1I TTAA 7 cut(s) 200, 597, 648, 716, 765, 816, 1072
Tru9I TTAA 7 cut(s) 200, 597, 648, 716, 765, 816, 1072
TscAI CASTG 3 cut(s) 211, 342, 782
TseI GCWGC 2 cut(s) 67, 914
TspDTI ATGAA 1 cut(s) 548
TspGWI ACGGA 1 cut(s) 911
TspRI CASTG 3 cut(s) 211, 342, 782
Tth111I GACNNNGTC 1 cut(s) 299
VpaK11BI GGWCC 2 cut(s) 301, 610
VspI ATTAAT 1 cut(s) 816
XapI RAATTY 4 cut(s) 287, 479, 586, 1068
XbaI TCTAGA 1 cut(s) 292
XceI RCATGY 2 cut(s) 704, 928
XhoI CTCGAG 1 cut(s) 563
XmaJI CCTAGG 1 cut(s) 685
XmnI GAANNNNTTC 1 cut(s) 753
XspI CTAG 2 cut(s) 293, 686
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.