pycom02g01760

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Forward (+)
1056178 .. 1057647
1470 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g01760.3

Sequence Viewer

Length: 1041 bp
ATGGAGGAGTTATTCGGATGCAAAACTGTCCAGGAGGTGCTCATCCAAGAGGAACAGGTGCCAGAGAAATATTTCCATAAAGTTGAAGATGGTGGAGTCCCAGTCCCGGATGATTCTCCTCCCCAGTTACTGGATGTTCCAGTTATTGATCTTGCTCTCCTCGCAGCTTCTTCAATTACTGCAGATGAATTTGAGAAATTCAGATCAGCTCTTGACACATTGGGTTGCTTCCAGGTAATAAACCACGGCATTGCGCCGGAATTCTTAGACGTGGTCCGAGAGATTACGAAACAGTTTTTTGCACTACCAGTTGAAGATAAGAAGAAGTACTTGAGACAAGGCAACGACGTTCAAGGATATGGAAACGACGTGGTTTATACGGAGCAACAAAAACTGGATTGGACTGATAGACTATACCTTACTGTGTTTCCACAAGACAACCGCAAGCTCAAACGTTGGCCTGAAAATCCCGAATCTTTTAGGCGGACTTTGGACCAATTTGCCACGGAGTTAGATGTGGTAACAAAAACTGTCCTCAAGGCCATGACAAGGTCATTGGGCTTGGAGCACAACTGCTTTTCCGACCCGTATGGGAGCATGGATATCAGATTCAACTTTTATCCTCCATGTCCGAGGCCTGATCTCGTCATCGGTTTCAAACCACACTCAGACTCATCCCTAATCACCCATGTCTTGCAAGACAAGGAAGTAGAAGGTCTTCAATTTCTCAAAGGTGATGAGTGGTTTCGAGCTCCCATTGTTCCTGACGCGCTTCTCATCATAGTTGGCGACCAAGTAGAGATGTTGAGCAACGGAGTATTCAAGGGCGCTGTACACAAGGTGGTGATACATCCAGACAAGGAGAGGATATCGGTGGCGGCATTCTGCTATGCGGAGTCGTACAAAATTGAACCTTTTGAAAGATTGGTGGATAAGTCGAGGCCAAGATTGTACAGAAAGATGGAAAATTATGGGGACATCTTTATGGAAAACTATCAGAAAGGGAGGAGAACAATTGAAGAAGCAAAAATATATGTGTAA

Protein Analysis

347

Amino Acids

39.88

Weight (kDa)

5.14

Isoelectric Point (pI)

43.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 58
AccB7I CCANNNNNTGG 1 cut(s) 130
AccII CGCG 1 cut(s) 770
AciI CCGC 4 cut(s) 442, 484, 878, 893
AclI AACGTT 1 cut(s) 454
AcsI RAATTY 3 cut(s) 188, 197, 260
AdeI CACNNNGTG 1 cut(s) 841
AfaI GTAC 4 cut(s) 329, 834, 902, 953
AfiI CCNNNNNNNGG 3 cut(s) 106, 130, 549
AjiI CACGTC 2 cut(s) 271, 370
AjnI CCWGG 2 cut(s) 30, 231
AluBI AGCT 4 cut(s) 167, 209, 448, 752
AluI AGCT 4 cut(s) 167, 209, 448, 752
Alw21I GWGCWC 3 cut(s) 42, 570, 754
Alw26I GTCTC 1 cut(s) 328
AlwNI CAGNNNCTG 1 cut(s) 130
AoxI GGCC 4 cut(s) 458, 540, 635, 941
ApeKI GCWGC 1 cut(s) 164
ApoI RAATTY 3 cut(s) 188, 197, 260
Asp700I GAANNNNTTC 2 cut(s) 71, 717
AspLEI GCGC 3 cut(s) 256, 772, 830
AspS9I GGNCC 2 cut(s) 274, 493
AsuC2I CCSGG 1 cut(s) 107
AsuHPI GGTGA 3 cut(s) 676, 746, 856
AvaII GGWCC 2 cut(s) 274, 493
BanI GGYRCC 1 cut(s) 58
BanII GRGCYC 1 cut(s) 754
BarI GAAGNNNNNNTAC 2 cut(s) 702, 734
BbsI GAAGAC 1 cut(s) 710
Bbv12I GWGCWC 3 cut(s) 42, 570, 754
BbvI GCAGC 1 cut(s) 176
BccI CCATC 2 cut(s) 83, 955
BceAI ACGGC 1 cut(s) 262
BciT130I CCWGG 2 cut(s) 32, 233
BcnI CCSGG 1 cut(s) 107
BcoDI GTCTC 1 cut(s) 328
BfmI CTRYAG 1 cut(s) 180
BfoI RGCGCY 1 cut(s) 831
BisI GCNGC 2 cut(s) 165, 879
BlsI GCNGC 2 cut(s) 166, 880
BmcAI AGTACT 1 cut(s) 329
Bme1390I CCNGG 3 cut(s) 32, 107, 233
Bme18I GGWCC 2 cut(s) 274, 493
BmgBI CACGTC 2 cut(s) 271, 370
BmgT120I GGNCC 2 cut(s) 274, 493
BmiI GGNNCC 1 cut(s) 60
BmrFI CCNGG 3 cut(s) 32, 107, 233
BmrI ACTGGG 2 cut(s) 95, 118
BmsI GCATC 1 cut(s) 8
BmuI ACTGGG 2 cut(s) 95, 118
BpiI GAAGAC 1 cut(s) 710
BpuEI CTTGAG 2 cut(s) 352, 521
BpuMI CCSGG 1 cut(s) 107
BsaJI CCNNGG 3 cut(s) 244, 504, 632
BsaXI ACNNNNNCTCC 2 cut(s) 87, 117
Bsc4I CCNNNNNNNGG 3 cut(s) 106, 130, 549
Bse1I ACTGG 6 cut(s) 101, 124, 135, 140, 308, 399
Bse3DI GCAATG 1 cut(s) 249
BseBI CCWGG 2 cut(s) 32, 233
BseDI CCNNGG 3 cut(s) 244, 504, 632
BseGI GGATG 6 cut(s) 23, 42, 115, 139, 674, 850
BseLI CCNNNNNNNGG 3 cut(s) 106, 130, 549
BseMI GCAATG 1 cut(s) 249
BseMII CTCAG 1 cut(s) 681
BseNI ACTGG 6 cut(s) 101, 124, 135, 140, 308, 399
BseRI GAGGAG 4 cut(s) 20, 108, 149, 1021
BseXI GCAGC 1 cut(s) 176
Bsh1236I CGCG 1 cut(s) 770
BshFI GGCC 4 cut(s) 460, 542, 637, 943
BshNI GGYRCC 1 cut(s) 58
BsiHKAI GWGCWC 3 cut(s) 42, 570, 754
BsiSI CCGG 2 cut(s) 107, 257
BslFI GGGAC 3 cut(s) 83, 89, 989
BslI CCNNNNNNNGG 3 cut(s) 106, 130, 549
BsmAI GTCTC 1 cut(s) 328
BsmFI GGGAC 3 cut(s) 83, 89, 989
BsmI GAATGC 1 cut(s) 881
BsnI GGCC 4 cut(s) 460, 542, 637, 943
Bsp1286I GDGCHC 3 cut(s) 42, 570, 754
Bsp1407I TGTACA 2 cut(s) 832, 951
Bsp143I GATC 3 cut(s) 148, 203, 640
BspACI CCGC 4 cut(s) 442, 484, 878, 893
BspANI GGCC 4 cut(s) 460, 542, 637, 943
BspCNI CTCAG 1 cut(s) 680
BspFNI CGCG 1 cut(s) 770
BspLI GGNNCC 1 cut(s) 60
BspMAI CTGCAG 1 cut(s) 184
BspT107I GGYRCC 1 cut(s) 58
BsrDI GCAATG 1 cut(s) 249
BsrGI TGTACA 2 cut(s) 832, 951
BsrI ACTGG 6 cut(s) 101, 124, 135, 140, 308, 399
BssECI CCNNGG 3 cut(s) 244, 504, 632
BssMI GATC 3 cut(s) 148, 203, 640
Bst2UI CCWGG 2 cut(s) 32, 233
Bst4CI ACNGT 4 cut(s) 28, 294, 424, 532
BstAUI TGTACA 2 cut(s) 832, 951
BstC8I GCNNGC 1 cut(s) 446
BstDEI CTNAG 2 cut(s) 265, 667
BstDSI CCRYGG 2 cut(s) 244, 504
BstF5I GGATG 6 cut(s) 23, 42, 115, 139, 674, 850
BstFNI CGCG 1 cut(s) 770
BstH2I RGCGCY 1 cut(s) 831
BstHHI GCGC 3 cut(s) 256, 772, 830
BstKTI GATC 3 cut(s) 151, 206, 643
BstMAI GTCTC 1 cut(s) 328
BstMBI GATC 3 cut(s) 148, 203, 640
BstMWI GCNNNNNNNGC 1 cut(s) 161
BstNI CCWGG 2 cut(s) 32, 233
BstSCI CCNGG 3 cut(s) 30, 105, 231
BstSFI CTRYAG 1 cut(s) 180
BstUI CGCG 1 cut(s) 770
BstV1I GCAGC 1 cut(s) 176
BstV2I GAAGAC 1 cut(s) 710
BsuRI GGCC 4 cut(s) 460, 542, 637, 943
BtgI CCRYGG 2 cut(s) 244, 504
BtrI CACGTC 2 cut(s) 271, 370
BtsCI GGATG 6 cut(s) 23, 42, 115, 139, 674, 850
Cac8I GCNNGC 1 cut(s) 446
CaiI CAGNNNCTG 1 cut(s) 130
CfoI GCGC 3 cut(s) 256, 772, 830
Cfr13I GGNCC 2 cut(s) 274, 493
CseI GACGC 1 cut(s) 776
Csp6I GTAC 4 cut(s) 328, 833, 901, 952
CviAII CATG 4 cut(s) 544, 598, 627, 689
CviJI RGCY 9 cut(s) 167, 209, 448, 460, 542, 561, 637, 752, 943
CviKI_1 RGCY 9 cut(s) 167, 209, 448, 460, 542, 561, 637, 752, 943
CviQI GTAC 4 cut(s) 328, 833, 901, 952
DdeI CTNAG 2 cut(s) 265, 667
DpnI GATC 3 cut(s) 150, 205, 642
DpnII GATC 3 cut(s) 148, 203, 640
DraIII CACNNNGTG 1 cut(s) 841
EciI GGCGGA 1 cut(s) 499
Ecl136II GAGCTC 1 cut(s) 752
Eco147I AGGCCT 1 cut(s) 637
Eco24I GRGCYC 1 cut(s) 754
Eco32I GATATC 2 cut(s) 604, 870
Eco47I GGWCC 2 cut(s) 274, 493
Eco53kI GAGCTC 1 cut(s) 752
EcoICRI GAGCTC 1 cut(s) 752
EcoRI GAATTC 1 cut(s) 260
EcoRII CCWGG 2 cut(s) 30, 231
EcoRV GATATC 2 cut(s) 604, 870
EcoT38I GRGCYC 1 cut(s) 754
FaeI CATG 4 cut(s) 547, 601, 630, 692
FalI AAGNNNNNCTT 2 cut(s) 314, 346
FaqI GGGAC 3 cut(s) 83, 89, 989
FatI CATG 4 cut(s) 543, 597, 626, 688
Fnu4HI GCNGC 2 cut(s) 165, 879
FokI GGATG 6 cut(s) 29, 30, 122, 146, 661, 837
FriOI GRGCYC 1 cut(s) 754
Fsp4HI GCNGC 2 cut(s) 165, 879
GlaI GCGC 3 cut(s) 255, 771, 829
GluI GCNGC 2 cut(s) 165, 879
HaeII RGCGCY 1 cut(s) 831
HaeIII GGCC 4 cut(s) 460, 542, 637, 943
HapII CCGG 2 cut(s) 107, 257
HgaI GACGC 1 cut(s) 776
HhaI GCGC 3 cut(s) 256, 772, 830
Hin1II CATG 4 cut(s) 547, 601, 630, 692
Hin6I GCGC 3 cut(s) 254, 770, 828
HinP1I GCGC 3 cut(s) 254, 770, 828
HinfI GANTC 6 cut(s) 96, 113, 473, 609, 671, 896
HpaII CCGG 2 cut(s) 107, 257
HphI GGTGA 3 cut(s) 676, 746, 856
Hpy166II GTNNAC 1 cut(s) 835
Hpy188I TCNGA 8 cut(s) 17, 203, 278, 583, 608, 633, 670, 999
Hpy188III TCNNGA 4 cut(s) 212, 470, 764, 854
Hpy8I GTNNAC 1 cut(s) 835
Hpy99I CGWCG 2 cut(s) 350, 371
HpyAV CCTTC 1 cut(s) 707
HpyCH4III ACNGT 4 cut(s) 28, 294, 424, 532
HpyCH4IV ACGT 4 cut(s) 270, 348, 369, 454
HpyCH4V TGCA 4 cut(s) 21, 182, 302, 697
HpyF10VI GCNNNNNNNGC 1 cut(s) 161
HpyF3I CTNAG 2 cut(s) 265, 667
HpySE526I ACGT 4 cut(s) 270, 348, 369, 454
Hsp92II CATG 4 cut(s) 547, 601, 630, 692
HspAI GCGC 3 cut(s) 254, 770, 828
Kzo9I GATC 3 cut(s) 148, 203, 640
LmnI GCTCC 4 cut(s) 382, 565, 594, 757
Lsp1109I GCAGC 1 cut(s) 176
LweI GCATC 1 cut(s) 8
MaeII ACGT 4 cut(s) 270, 348, 369, 454
MaeIII GTNAC 2 cut(s) 126, 520
MalI GATC 3 cut(s) 150, 205, 642
MboI GATC 3 cut(s) 148, 203, 640
MboII GAAGA 6 cut(s) 98, 162, 326, 334, 710, 1031
MfeI CAATTG 1 cut(s) 1014
MhlI GDGCHC 3 cut(s) 42, 570, 754
MluCI AATT 9 cut(s) 174, 188, 197, 260, 497, 722, 906, 967, 1014
MlyI GAGTC 3 cut(s) 105, 665, 905
MmeI TCCRAC 1 cut(s) 606
MroXI GAANNNNTTC 2 cut(s) 71, 717
MslI CAYNNNNRTG 1 cut(s) 983
MspI CCGG 2 cut(s) 107, 257
MspR9I CCNGG 3 cut(s) 32, 107, 233
MunI CAATTG 1 cut(s) 1014
Mva1269I GAATGC 1 cut(s) 881
MvaI CCWGG 2 cut(s) 32, 233
MvnI CGCG 1 cut(s) 770
MwoI GCNNNNNNNGC 1 cut(s) 161
NciI CCSGG 1 cut(s) 107
NdeII GATC 3 cut(s) 148, 203, 640
NlaIII CATG 4 cut(s) 547, 601, 630, 692
NlaIV GGNNCC 1 cut(s) 60
PceI AGGCCT 1 cut(s) 637
PctI GAATGC 1 cut(s) 881
PdmI GAANNNNTTC 2 cut(s) 71, 717
PfeI GAWTC 3 cut(s) 113, 473, 609
PflFI GACNNNGTC 2 cut(s) 272, 550
PflMI CCANNNNNTGG 1 cut(s) 130
PfoI TCCNGGA 2 cut(s) 30, 105
PkrI GCNGC 2 cut(s) 166, 880
PleI GAGTC 3 cut(s) 104, 665, 904
PpsI GAGTC 3 cut(s) 104, 665, 904
Psp124BI GAGCTC 1 cut(s) 754
Psp1406I AACGTT 1 cut(s) 454
Psp6I CCWGG 2 cut(s) 30, 231
PspGI CCWGG 2 cut(s) 30, 231
PspN4I GGNNCC 1 cut(s) 60
PspPI GGNCC 2 cut(s) 274, 493
PstI CTGCAG 1 cut(s) 184
PstNI CAGNNNCTG 1 cut(s) 130
PsyI GACNNNGTC 2 cut(s) 272, 550
RsaI GTAC 4 cut(s) 329, 834, 902, 953
RsaNI GTAC 4 cut(s) 328, 833, 901, 952
RseI CAYNNNNRTG 1 cut(s) 983
SacI GAGCTC 1 cut(s) 754
SatI GCNGC 2 cut(s) 165, 879
Sau3AI GATC 3 cut(s) 148, 203, 640
Sau96I GGNCC 2 cut(s) 274, 493
ScaI AGTACT 1 cut(s) 329
SchI GAGTC 3 cut(s) 105, 665, 905
ScrFI CCNGG 3 cut(s) 32, 107, 233
SduI GDGCHC 3 cut(s) 42, 570, 754
SfaNI GCATC 1 cut(s) 8
SfcI CTRYAG 1 cut(s) 180
SinI GGWCC 2 cut(s) 274, 493
SmiMI CAYNNNNRTG 1 cut(s) 983
SmlI CTYRAG 2 cut(s) 331, 536
SmoI CTYRAG 2 cut(s) 331, 536
Sse9I AATT 9 cut(s) 174, 188, 197, 260, 497, 722, 906, 967, 1014
SseBI AGGCCT 1 cut(s) 637
SsiI CCGC 4 cut(s) 442, 484, 878, 893
SspI AATATT 1 cut(s) 71
SstI GAGCTC 1 cut(s) 754
StuI AGGCCT 1 cut(s) 637
StyD4I CCNGG 3 cut(s) 30, 105, 231
TaaI ACNGT 4 cut(s) 28, 294, 424, 532
TaiI ACGT 4 cut(s) 273, 351, 372, 457
TaqI TCGA 2 cut(s) 748, 938
TasI AATT 9 cut(s) 174, 188, 197, 260, 497, 722, 906, 967, 1014
TatI WGTACW 3 cut(s) 327, 832, 951
TauI GCSGC 1 cut(s) 881
TfiI GAWTC 3 cut(s) 113, 473, 609
TseI GCWGC 1 cut(s) 164
TspDTI ATGAA 1 cut(s) 201
TspGWI ACGGA 3 cut(s) 395, 521, 828
Tth111I GACNNNGTC 2 cut(s) 272, 550
Van91I CCANNNNNTGG 1 cut(s) 130
VpaK11BI GGWCC 2 cut(s) 274, 493
XapI RAATTY 3 cut(s) 188, 197, 260
XmnI GAANNNNTTC 2 cut(s) 71, 717
ZrmI AGTACT 1 cut(s) 329
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.