Rh2DG026700

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Forward (+)
1620213 .. 1621762
1550 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG026700.1

Sequence Viewer

Length: 1260 bp
ATGATCTCACCCTCTCACCCTCTCACCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGATCTGAATACAATAAAGTCCAATTCTTCTGTCCTTTGCTTATCAAGTTATCATAAGAGCACTCAGCAATTAGCAGCTAAATCTGCAAAAAAACCTTTACAACATCCAAACAGAAAGAAAGAAAGAAAAAAAGACATGGCTGAATCTTCCACTCCTGCCAAGGTCGAGTTATTAGCAACCAAAACTGTGCAAGAGCAACTCACTGAAGGAGAAGTACTGGTGCCACAGAAATACATTCTCAAAGATGGAATCCCACTCCCAAATGCTTCTGTTGAGTTGATGGATGTTCCAGTTATTGATCTTGGTCTCCTCGCACCTTCCTCATTCAGTATGGAAGAATTTGACAAACTCAGATCAGCTCTTACCAAATGGGGTTGCTTTCAGGTAATAAACCATGGAATGACTCCTGAATTCCTTGACAAAGTCCGTGAAATCACGAAACAATTTTTTGCACTTCCACTGCAAGAGAAGCAGAAATATTTGAGGCCAGTCGACAACATTGAAGGATATGGGAATGACATGGTTTTTTCAGAGCAGCAAACACTTGATTGGACTGATAGACTATACCTTACTGTATATCCACCAGACAAGCGCAAGCTCAAGTTTTGGCCTGAAAATCCCAAATCTTTTAGGGATACTCTAGACCAATATACCAGTAAGTTACAGGTCATAACAGAAACTGTCCTTAAGGGCATGGCGCGGTCATTGAATTTGGAGGAAGATTGCTTTCTGGACAAGTATGGAGAACAAAGGAAAATGGATGCTAGGTTTAACTTCTATCCTCCTTGTTCAAGGCCCGATCGCGTACTAGGTGTCAAGCCACATGCAGATGGATCAATAATCACCCTTCTGTTGCAAGATAAAGAAGTGGAAGGTCTTCAATTTCTGAAAGATGATCAATGGTTTAGAGCTTCAATTGTTCCTGAGGCACTTCTCATTAATGTTGGTGATCAAGTAGAGATATTGACTAATGGACTGTTCAAGAGCCCAGTGCACAAGGTAGTGACAAATGCAGAAAAGGAGAGGATTTCTTTGGCTGCGTTTTGTGTCCCGGATTCAGAGACAGAGATTGAACCCTTTGAAAGCCTCATCAATGAGTCAAGGCCAAGGTTGTACAAAAAGTTGAAAAACTACGTTGGCATCTATTTTGAATACTACCAGCAGGGAAGAAGACCAATTGAAGCAGCAATTATATAA

Protein Analysis

419

Amino Acids

47.84

Weight (kDa)

6.64

Isoelectric Point (pI)

44.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 117 - 227 2.5e-29 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 277 - 372 2e-29 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 283
AccI GTMKAC 1 cut(s) 555
AccII CGCG 2 cut(s) 763, 867
AciI CCGC 1 cut(s) 763
AclWI GGATC 1 cut(s) 904
AcsI RAATTY 3 cut(s) 401, 473, 772
AcuI CTGAAG 1 cut(s) 288
AfaI GTAC 3 cut(s) 279, 870, 1178
AflII CTTAAG 1 cut(s) 749
AluBI AGCT 4 cut(s) 140, 422, 661, 974
AluI AGCT 4 cut(s) 140, 422, 661, 974
Alw21I GWGCWC 2 cut(s) 125, 1059
Alw26I GTCTC 2 cut(s) 374, 1118
Alw44I GTGCAC 1 cut(s) 1055
AlwI GGATC 1 cut(s) 904
AlwNI CAGNNNCTG 1 cut(s) 743
AoxI GGCC 4 cut(s) 548, 671, 857, 1166
ApaLI GTGCAC 1 cut(s) 1055
ApeKI GCWGC 4 cut(s) 137, 598, 1100, 1247
ApoI RAATTY 3 cut(s) 401, 473, 772
AseI ATTAAT 1 cut(s) 1002
Asp700I GAANNNNTTC 1 cut(s) 939
AspLEI GCGC 2 cut(s) 657, 763
AspS9I GGNCC 1 cut(s) 858
AsuC2I CCSGG 1 cut(s) 1115
AsuHPI GGTGA 4 cut(s) 8, 16, 898, 1022
AxyI CCTNAGG 1 cut(s) 987
BaeGI GKGCMC 1 cut(s) 1059
BanI GGYRCC 1 cut(s) 283
BanII GRGCYC 1 cut(s) 1052
BarI GAAGNNNNNNTAC 2 cut(s) 261, 293
BbsI GAAGAC 2 cut(s) 932, 1240
Bbv12I GWGCWC 2 cut(s) 125, 1059
BbvI GCAGC 3 cut(s) 149, 610, 1087
BccI CCATC 3 cut(s) 302, 337, 887
BciVI GTATCC 1 cut(s) 691
BclI TGATCA 2 cut(s) 958, 1012
BcnI CCSGG 1 cut(s) 1115
BcoDI GTCTC 2 cut(s) 374, 1118
BfaI CTAG 3 cut(s) 704, 828, 872
BfrI CTTAAG 1 cut(s) 749
BfuI GTATCC 1 cut(s) 691
BisI GCNGC 4 cut(s) 138, 599, 1101, 1248
BlsI GCNGC 4 cut(s) 139, 600, 1102, 1249
BmcAI AGTACT 1 cut(s) 279
Bme1390I CCNGG 1 cut(s) 1115
BmgT120I GGNCC 1 cut(s) 858
BmiI GGNNCC 1 cut(s) 285
BmrFI CCNGG 1 cut(s) 1115
BmrI ACTGGG 1 cut(s) 1046
BmsI GCATC 2 cut(s) 814, 1212
BmuI ACTGGG 1 cut(s) 1046
BpiI GAAGAC 2 cut(s) 932, 1240
BpuEI CTTGAG 1 cut(s) 647
BpuMI CCSGG 1 cut(s) 1115
BsaI GGTCTC 1 cut(s) 374
BsaJI CCNNGG 3 cut(s) 222, 457, 1169
Bse1I ACTGG 5 cut(s) 285, 353, 551, 717, 1052
Bse21I CCTNAGG 1 cut(s) 987
BseDI CCNNGG 3 cut(s) 222, 457, 1169
BseGI GGATG 3 cut(s) 166, 352, 829
BseMII CTCAG 3 cut(s) 140, 427, 978
BseNI ACTGG 5 cut(s) 285, 353, 551, 717, 1052
BseRI GAGGAG 1 cut(s) 362
BseSI GKGCMC 1 cut(s) 1059
BseXI GCAGC 3 cut(s) 149, 610, 1087
Bsh1236I CGCG 2 cut(s) 763, 867
Bsh1285I CGRYCG 1 cut(s) 865
BshFI GGCC 4 cut(s) 550, 673, 859, 1168
BshNI GGYRCC 1 cut(s) 283
BsiEI CGRYCG 1 cut(s) 865
BsiHKAI GWGCWC 2 cut(s) 125, 1059
BsiSI CCGG 1 cut(s) 1115
BslFI GGGAC 1 cut(s) 1097
BsmAI GTCTC 2 cut(s) 374, 1118
BsmFI GGGAC 1 cut(s) 1097
BsnI GGCC 4 cut(s) 550, 673, 859, 1168
Bso31I GGTCTC 1 cut(s) 374
Bsp1286I GDGCHC 3 cut(s) 125, 1052, 1059
Bsp1407I TGTACA 1 cut(s) 1176
Bsp143I GATC 8 cut(s) 3, 64, 361, 416, 862, 896, 958, 1012
Bsp19I CCATGG 1 cut(s) 457
BspACI CCGC 1 cut(s) 763
BspANI GGCC 4 cut(s) 550, 673, 859, 1168
BspCNI CTCAG 3 cut(s) 139, 426, 979
BspFNI CGCG 2 cut(s) 763, 867
BspLI GGNNCC 1 cut(s) 285
BspPI GGATC 1 cut(s) 904
BspT107I GGYRCC 1 cut(s) 283
BspTI CTTAAG 1 cut(s) 749
BspTNI GGTCTC 1 cut(s) 374
BsrGI TGTACA 1 cut(s) 1176
BsrI ACTGG 5 cut(s) 285, 353, 551, 717, 1052
BssECI CCNNGG 3 cut(s) 222, 457, 1169
BssMI GATC 8 cut(s) 3, 64, 361, 416, 862, 896, 958, 1012
BssT1I CCWWGG 3 cut(s) 222, 457, 1169
Bst4CI ACNGT 4 cut(s) 250, 637, 745, 1041
BstAFI CTTAAG 1 cut(s) 749
BstAUI TGTACA 1 cut(s) 1176
BstC8I GCNNGC 1 cut(s) 659
BstDEI CTNAG 3 cut(s) 126, 413, 987
BstDSI CCRYGG 1 cut(s) 457
BstF5I GGATG 3 cut(s) 166, 352, 829
BstFNI CGCG 2 cut(s) 763, 867
BstHHI GCGC 2 cut(s) 657, 763
BstKTI GATC 8 cut(s) 6, 67, 364, 419, 865, 899, 961, 1015
BstMAI GTCTC 2 cut(s) 374, 1118
BstMBI GATC 8 cut(s) 3, 64, 361, 416, 862, 896, 958, 1012
BstMCI CGRYCG 1 cut(s) 865
BstMWI GCNNNNNNNGC 2 cut(s) 146, 532
BstNSI RCATGY 1 cut(s) 890
BstSCI CCNGG 1 cut(s) 1113
BstSLI GKGCMC 1 cut(s) 1059
BstUI CGCG 2 cut(s) 763, 867
BstV1I GCAGC 3 cut(s) 149, 610, 1087
BstV2I GAAGAC 2 cut(s) 932, 1240
Bsu36I CCTNAGG 1 cut(s) 987
BsuI GTATCC 1 cut(s) 691
BsuRI GGCC 4 cut(s) 550, 673, 859, 1168
BtgI CCRYGG 1 cut(s) 457
BtsCI GGATG 3 cut(s) 166, 352, 829
BtsI GCAGTG 1 cut(s) 521
BtsIMutI CAGTG 3 cut(s) 264, 521, 1059
Cac8I GCNNGC 1 cut(s) 659
CaiI CAGNNNCTG 1 cut(s) 743
CfoI GCGC 2 cut(s) 657, 763
Cfr13I GGNCC 1 cut(s) 858
Csp6I GTAC 3 cut(s) 278, 869, 1177
CviAII CATG 5 cut(s) 199, 458, 583, 757, 887
CviQI GTAC 3 cut(s) 278, 869, 1177
DdeI CTNAG 3 cut(s) 126, 413, 987
DpnI GATC 8 cut(s) 5, 66, 363, 418, 864, 898, 960, 1014
DpnII GATC 8 cut(s) 3, 64, 361, 416, 862, 896, 958, 1012
Eco130I CCWWGG 3 cut(s) 222, 457, 1169
Eco24I GRGCYC 1 cut(s) 1052
Eco31I GGTCTC 1 cut(s) 374
Eco57I CTGAAG 1 cut(s) 288
Eco81I CCTNAGG 1 cut(s) 987
EcoRI GAATTC 1 cut(s) 473
EcoT14I CCWWGG 3 cut(s) 222, 457, 1169
EcoT38I GRGCYC 1 cut(s) 1052
ErhI CCWWGG 3 cut(s) 222, 457, 1169
FaeI CATG 5 cut(s) 202, 461, 586, 760, 890
FaqI GGGAC 1 cut(s) 1097
FatI CATG 5 cut(s) 198, 457, 582, 756, 886
FbaI TGATCA 2 cut(s) 958, 1012
FblI GTMKAC 1 cut(s) 555
Fnu4HI GCNGC 4 cut(s) 138, 599, 1101, 1248
FokI GGATG 3 cut(s) 153, 359, 836
FriOI GRGCYC 1 cut(s) 1052
Fsp4HI GCNGC 4 cut(s) 138, 599, 1101, 1248
FspBI CTAG 3 cut(s) 704, 828, 872
GlaI GCGC 2 cut(s) 656, 762
GluI GCNGC 4 cut(s) 138, 599, 1101, 1248
HaeIII GGCC 4 cut(s) 550, 673, 859, 1168
HapII CCGG 1 cut(s) 1115
HhaI GCGC 2 cut(s) 657, 763
Hin1II CATG 5 cut(s) 202, 461, 586, 760, 890
Hin6I GCGC 2 cut(s) 655, 761
HinP1I GCGC 2 cut(s) 655, 761
HincII GTYRAC 1 cut(s) 556
HindII GTYRAC 1 cut(s) 556
HinfI GANTC 5 cut(s) 206, 312, 466, 1118, 1160
HpaII CCGG 1 cut(s) 1115
HphI GGTGA 4 cut(s) 8, 16, 898, 1022
Hpy166II GTNNAC 2 cut(s) 556, 1057
Hpy188I TCNGA 6 cut(s) 64, 69, 416, 595, 951, 1123
Hpy188III TCNNGA 6 cut(s) 470, 499, 704, 794, 986, 1045
Hpy8I GTNNAC 2 cut(s) 556, 1057
HpyAV CCTTC 5 cut(s) 263, 390, 560, 920, 929
HpyCH4III ACNGT 4 cut(s) 250, 637, 745, 1041
HpyCH4IV ACGT 1 cut(s) 1197
HpyCH4V TGCA 8 cut(s) 149, 253, 515, 526, 890, 919, 1057, 1076
HpyF10VI GCNNNNNNNGC 2 cut(s) 146, 532
HpyF3I CTNAG 3 cut(s) 126, 413, 987
HpySE526I ACGT 1 cut(s) 1197
Hsp92II CATG 5 cut(s) 202, 461, 586, 760, 890
HspAI GCGC 2 cut(s) 655, 761
Ksp22I TGATCA 2 cut(s) 958, 1012
Kzo9I GATC 8 cut(s) 3, 64, 361, 416, 862, 896, 958, 1012
Lsp1109I GCAGC 3 cut(s) 149, 610, 1087
LweI GCATC 2 cut(s) 814, 1212
MaeI CTAG 3 cut(s) 704, 828, 872
MaeII ACGT 1 cut(s) 1197
MaeIII GTNAC 2 cut(s) 723, 1066
MalI GATC 8 cut(s) 5, 66, 363, 418, 864, 898, 960, 1014
MboI GATC 8 cut(s) 3, 64, 361, 416, 862, 896, 958, 1012
MboII GAAGA 7 cut(s) 81, 201, 410, 794, 932, 1242, 1245
MfeI CAATTG 2 cut(s) 978, 1239
MhlI GDGCHC 3 cut(s) 125, 1052, 1059
MlyI GAGTC 2 cut(s) 460, 1169
MroXI GAANNNNTTC 1 cut(s) 939
MseI TTAA 3 cut(s) 750, 834, 1002
MslI CAYNNNNRTG 1 cut(s) 891
MspCI CTTAAG 1 cut(s) 749
MspI CCGG 1 cut(s) 1115
MspR9I CCNGG 1 cut(s) 1115
MunI CAATTG 2 cut(s) 978, 1239
MvnI CGCG 2 cut(s) 763, 867
MwoI GCNNNNNNNGC 2 cut(s) 146, 532
NciI CCSGG 1 cut(s) 1115
NcoI CCATGG 1 cut(s) 457
NdeII GATC 8 cut(s) 3, 64, 361, 416, 862, 896, 958, 1012
NlaIII CATG 5 cut(s) 202, 461, 586, 760, 890
NlaIV GGNNCC 1 cut(s) 285
NmuCI GTSAC 1 cut(s) 1066
NspI RCATGY 1 cut(s) 890
PdmI GAANNNNTTC 1 cut(s) 939
PfeI GAWTC 3 cut(s) 206, 312, 1118
PflFI GACNNNGTC 1 cut(s) 485
PfoI TCCNGGA 1 cut(s) 1113
PkrI GCNGC 4 cut(s) 139, 600, 1102, 1249
Ple19I CGATCG 1 cut(s) 865
PleI GAGTC 2 cut(s) 460, 1168
PpsI GAGTC 2 cut(s) 460, 1168
PshBI ATTAAT 1 cut(s) 1002
PspN4I GGNNCC 1 cut(s) 285
PspPI GGNCC 1 cut(s) 858
PstNI CAGNNNCTG 1 cut(s) 743
PsyI GACNNNGTC 1 cut(s) 485
PvuI CGATCG 1 cut(s) 865
RsaI GTAC 3 cut(s) 279, 870, 1178
RsaNI GTAC 3 cut(s) 278, 869, 1177
RseI CAYNNNNRTG 1 cut(s) 891
SalI GTCGAC 1 cut(s) 554
SaqAI TTAA 3 cut(s) 750, 834, 1002
SatI GCNGC 4 cut(s) 138, 599, 1101, 1248
Sau3AI GATC 8 cut(s) 3, 64, 361, 416, 862, 896, 958, 1012
Sau96I GGNCC 1 cut(s) 858
ScaI AGTACT 1 cut(s) 279
SchI GAGTC 2 cut(s) 460, 1169
ScrFI CCNGG 1 cut(s) 1115
SduI GDGCHC 3 cut(s) 125, 1052, 1059
SfaNI GCATC 2 cut(s) 814, 1212
SmiMI CAYNNNNRTG 1 cut(s) 891
SmlI CTYRAG 2 cut(s) 662, 749
SmoI CTYRAG 2 cut(s) 662, 749
SsiI CCGC 1 cut(s) 763
SspI AATATT 1 cut(s) 542
SspMI CTAG 3 cut(s) 704, 828, 872
StyD4I CCNGG 1 cut(s) 1113
StyI CCWWGG 3 cut(s) 222, 457, 1169
TaaI ACNGT 4 cut(s) 250, 637, 745, 1041
TaiI ACGT 1 cut(s) 1200
TaqI TCGA 2 cut(s) 228, 555
TatI WGTACW 2 cut(s) 277, 1176
TfiI GAWTC 3 cut(s) 206, 312, 1118
Tru1I TTAA 3 cut(s) 750, 834, 1002
Tru9I TTAA 3 cut(s) 750, 834, 1002
TscAI CASTG 3 cut(s) 271, 528, 1059
TseFI GTSAC 1 cut(s) 1066
TseI GCWGC 4 cut(s) 137, 598, 1100, 1247
Tsp45I GTSAC 1 cut(s) 1066
TspGWI ACGGA 1 cut(s) 479
TspRI CASTG 3 cut(s) 271, 528, 1059
Tth111I GACNNNGTC 1 cut(s) 485
Vha464I CTTAAG 1 cut(s) 749
VneI GTGCAC 1 cut(s) 1055
VspI ATTAAT 1 cut(s) 1002
XapI RAATTY 3 cut(s) 401, 473, 772
XbaI TCTAGA 1 cut(s) 703
XceI RCATGY 1 cut(s) 890
XmiI GTMKAC 1 cut(s) 555
XmnI GAANNNNTTC 1 cut(s) 939
XspI CTAG 3 cut(s) 704, 828, 872
ZrmI AGTACT 1 cut(s) 279
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.