Prupe.6G303100_v2.0.a1

Hydrolyzes acetyl esters in homogalacturonan regions of pectin. In type I primary cell wall, galacturonic acid residues of pectin can be acetylated at the O-2 and O-3 positions. Decreasing the degree of acetylation of pectin gels in vitro alters their physical properties

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
27466448 .. 27471165
4718 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G303100.2

Sequence Viewer

Length: 1248 bp
ATGAAGCTCTGGTGGGTTGGCATTGTAATATCACTTGTTTTCAGCAAATGGGCTAATGGGTTTGTAGAGCATAGCTTTAATGAAACAGAACTGTCTTTCTTGGAGGCCTATGGAGAATCCAAGGTCGGAGCTAACTATCTCATGGTAGGGCTAACCCTCATTCCAGGAGCTGGAGCCAAAAGAGCAGTCTGCTTGGATGGAACTTTACCTGGGTATCATTTGCATCGTGGATATGGGTCAGGAGCAAATAGTTGGCTCATTCAATTGGAGGGAGGAGGTTGGTGTAACAGCATTAGAAATTGTGTTTACCGAAAAACAACCAGGCGGGGATCGTCAAGATTCATGGAAAAAAACATAGCATTTACTGGAATACTAAGCAATAAAGCTGAAGAAAATCCTGATTTTTTCAACTGGAACAGAGTAAAGCTTCGGTATTGTGATGGTGCTTCTTTTACTGGGGACGGTGAAGATAAGGCCAGACAACTGCAATTTAGAGGACAGCGTATATGGTTGTCTGCAATGGAAGATTTGAAGTCAAAGGGCATGCGCTATGCCAAGCAGACTCTTCTTTCAGGTTGCTCTGCTGGCGGTCTGGCAGCTATTTTGCACTGTGATGAGTTCAGGGGCTTATTTCCAAGAACTACAAAAGTGAAGTGCCTGAGTGATGCTGGATTGTTTCTTGATGCGCCTGACGTTTCTGGTGGACGCACACTCAGGAATTTATATAATGGTGTTGTTGGCTTGCAGGGAGTGCAACATAATCTGCCACGGGTTTGCACTAACCACCTTGATCCTACTTCGTGCTTCTTCCCACAGAACTTGATTGCCAACATCCAAACTCCACTGTTTATACTCAATGCAGCATACGATTCATGGCAGATACAATCCAGTTTAGCTCCAGCATCAGCAGATCCTGCCGGCTTCTGGCACGAGTGCAGATTAAACCATGCAAAATGTACTCCATCACAAATCAATTTCTTGCAAGGATTCAGGAATCAAATGCTGAATGCAGTAAAACGATTCGCTATGTCTAACAAAAATGGGTTGTTTATTAATTCGTGTTTTGCGCATTGCCAAACTGAGAGGCAGGATACATGGTTTGCTGATGATTCTCCAGTTATTGGAAAGAAGGCAATCGCAATAGCTGTCGGAGATTGGTATTTTGACCGAACAAGTGTGAAGGCTGTTGATTGTCCCTACCCTTGTGACAATTCTTGCCACAATCTGGTTTTCCAAAGAGCAAATTAA

Protein Analysis

416

Amino Acids

46.21

Weight (kDa)

8.87

Isoelectric Point (pI)

38.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1068
AccB7I CCANNNNNTGG 3 cut(s) 170, 1121, 1225
AciI CCGC 2 cut(s) 325, 588
AclWI GGATC 3 cut(s) 337, 785, 905
AcsI RAATTY 1 cut(s) 718
AcuI CTGAAG 1 cut(s) 408
AfaI GTAC 1 cut(s) 958
AfiI CCNNNNNNNGG 4 cut(s) 170, 924, 1121, 1225
AgsI TTSAA 3 cut(s) 263, 409, 532
AjnI CCWGG 3 cut(s) 163, 208, 320
AluBI AGCT 9 cut(s) 7, 75, 131, 170, 386, 427, 599, 896, 1145
AluI AGCT 9 cut(s) 7, 75, 131, 170, 386, 427, 599, 896, 1145
AlwI GGATC 3 cut(s) 337, 785, 905
AlwNI CAGNNNCTG 2 cut(s) 170, 914
AoxI GGCC 2 cut(s) 105, 474
ApeKI GCWGC 2 cut(s) 596, 860
ApoI RAATTY 1 cut(s) 718
ArsI GACNNNNNNTTYG 2 cut(s) 171, 203
AseI ATTAAT 1 cut(s) 1053
AspLEI GCGC 3 cut(s) 549, 688, 1069
AsuHPI GGTGA 1 cut(s) 476
BaeI ACNNNNGTAYC 2 cut(s) 197, 230
BauI CACGAG 1 cut(s) 929
BbvI GCAGC 2 cut(s) 608, 872
BccI CCATC 3 cut(s) 191, 434, 970
BciT130I CCWGG 3 cut(s) 165, 210, 322
BciVI GTATCC 1 cut(s) 1084
BfuI GTATCC 1 cut(s) 1084
BisI GCNGC 2 cut(s) 597, 861
BlsI GCNGC 2 cut(s) 598, 862
Bme1390I CCNGG 3 cut(s) 165, 210, 322
BmiI GGNNCC 1 cut(s) 175
BmrFI CCNGG 3 cut(s) 165, 210, 322
BmrI ACTGGG 1 cut(s) 465
BmsI GCATC 4 cut(s) 232, 655, 673, 911
BmuI ACTGGG 1 cut(s) 465
BpmI CTGGAG 3 cut(s) 192, 882, 1098
BsaJI CCNNGG 3 cut(s) 120, 209, 767
Bsc4I CCNNNNNNNGG 4 cut(s) 170, 924, 1121, 1225
Bse118I RCCGGY 1 cut(s) 917
Bse1I ACTGG 5 cut(s) 370, 416, 460, 888, 1115
Bse3DI GCAATG 2 cut(s) 525, 1069
BseBI CCWGG 3 cut(s) 165, 210, 322
BseDI CCNNGG 3 cut(s) 120, 209, 767
BseGI GGATG 2 cut(s) 202, 831
BseLI CCNNNNNNNGG 4 cut(s) 170, 924, 1121, 1225
BseMI GCAATG 2 cut(s) 525, 1069
BseMII CTCAG 3 cut(s) 650, 727, 1071
BseNI ACTGG 5 cut(s) 370, 416, 460, 888, 1115
BseRI GAGGAG 1 cut(s) 288
BseXI GCAGC 2 cut(s) 608, 872
BsgI GTGCAG 1 cut(s) 955
BshFI GGCC 2 cut(s) 107, 476
BsiSI CCGG 1 cut(s) 918
BslFI GGGAC 2 cut(s) 473, 1179
BslI CCNNNNNNNGG 4 cut(s) 170, 924, 1121, 1225
BsmFI GGGAC 2 cut(s) 473, 1179
BsmI GAATGC 1 cut(s) 1012
BsnI GGCC 2 cut(s) 107, 476
Bsp143I GATC 3 cut(s) 329, 790, 910
BspACI CCGC 2 cut(s) 325, 588
BspANI GGCC 2 cut(s) 107, 476
BspCNI CTCAG 3 cut(s) 651, 726, 1072
BspLI GGNNCC 1 cut(s) 175
BspPI GGATC 3 cut(s) 337, 785, 905
BsrDI GCAATG 2 cut(s) 525, 1069
BsrFI RCCGGY 1 cut(s) 917
BsrI ACTGG 5 cut(s) 370, 416, 460, 888, 1115
BssAI RCCGGY 1 cut(s) 917
BssECI CCNNGG 3 cut(s) 120, 209, 767
BssMI GATC 3 cut(s) 329, 790, 910
BssSI CACGAG 1 cut(s) 929
BssT1I CCWWGG 1 cut(s) 120
Bst2BI CACGAG 1 cut(s) 929
Bst2UI CCWGG 3 cut(s) 165, 210, 322
Bst4CI ACNGT 4 cut(s) 93, 464, 611, 846
Bst6I CTCTTC 1 cut(s) 570
BstAPI GCANNNNNTGC 2 cut(s) 751, 914
BstC8I GCNNGC 4 cut(s) 545, 586, 743, 919
BstDEI CTNAG 4 cut(s) 374, 659, 713, 1080
BstDSI CCRYGG 1 cut(s) 767
BstF5I GGATG 2 cut(s) 202, 831
BstHHI GCGC 3 cut(s) 549, 688, 1069
BstKTI GATC 3 cut(s) 332, 793, 913
BstMBI GATC 3 cut(s) 329, 790, 910
BstMWI GCNNNNNNNGC 4 cut(s) 182, 585, 751, 914
BstNI CCWGG 3 cut(s) 165, 210, 322
BstNSI RCATGY 1 cut(s) 547
BstSCI CCNGG 3 cut(s) 163, 208, 320
BstV1I GCAGC 2 cut(s) 608, 872
BstX2I RGATCY 1 cut(s) 910
BstYI RGATCY 1 cut(s) 910
BsuI GTATCC 1 cut(s) 1084
BsuRI GGCC 2 cut(s) 107, 476
BtgI CCRYGG 1 cut(s) 767
BtsCI GGATG 2 cut(s) 202, 831
BtsIMutI CAGTG 2 cut(s) 607, 842
Cac8I GCNNGC 4 cut(s) 545, 586, 743, 919
CaiI CAGNNNCTG 2 cut(s) 170, 914
CfoI GCGC 3 cut(s) 549, 688, 1069
Cfr10I RCCGGY 1 cut(s) 917
CseI GACGC 1 cut(s) 714
Csp6I GTAC 1 cut(s) 957
CspCI CAANNNNNGTGG 2 cut(s) 801, 836
CviAII CATG 6 cut(s) 142, 343, 544, 873, 947, 1095
CviQI GTAC 1 cut(s) 957
DdeI CTNAG 4 cut(s) 374, 659, 713, 1080
DpnI GATC 3 cut(s) 331, 792, 912
DpnII GATC 3 cut(s) 329, 790, 910
Eam1104I CTCTTC 1 cut(s) 570
EarI CTCTTC 1 cut(s) 570
Eco130I CCWWGG 1 cut(s) 120
Eco147I AGGCCT 1 cut(s) 107
Eco57I CTGAAG 1 cut(s) 408
EcoRII CCWGG 3 cut(s) 163, 208, 320
EcoT14I CCWWGG 1 cut(s) 120
ErhI CCWWGG 1 cut(s) 120
FaeI CATG 6 cut(s) 145, 346, 547, 876, 950, 1098
FaqI GGGAC 2 cut(s) 473, 1179
FatI CATG 6 cut(s) 141, 342, 543, 872, 946, 1094
FauI CCCGC 1 cut(s) 318
Fnu4HI GCNGC 2 cut(s) 597, 861
FokI GGATG 2 cut(s) 209, 818
Fsp4HI GCNGC 2 cut(s) 597, 861
FspI TGCGCA 1 cut(s) 1068
GlaI GCGC 3 cut(s) 548, 687, 1068
GluI GCNGC 2 cut(s) 597, 861
GsuI CTGGAG 3 cut(s) 192, 882, 1098
HaeIII GGCC 2 cut(s) 107, 476
HapII CCGG 1 cut(s) 918
HgaI GACGC 1 cut(s) 714
HhaI GCGC 3 cut(s) 549, 688, 1069
Hin1II CATG 6 cut(s) 145, 346, 547, 876, 950, 1098
Hin6I GCGC 3 cut(s) 547, 686, 1067
HinP1I GCGC 3 cut(s) 547, 686, 1067
HindIII AAGCTT 1 cut(s) 425
HinfI GANTC 8 cut(s) 116, 339, 562, 869, 987, 994, 1020, 1109
HpaII CCGG 1 cut(s) 918
HphI GGTGA 1 cut(s) 476
Hpy166II GTNNAC 2 cut(s) 307, 704
Hpy188I TCNGA 2 cut(s) 128, 1151
Hpy188III TCNNGA 6 cut(s) 240, 336, 398, 680, 715, 991
Hpy8I GTNNAC 2 cut(s) 307, 704
HpyAV CCTTC 2 cut(s) 1123, 1174
HpyCH4III ACNGT 4 cut(s) 93, 464, 611, 846
HpyCH4IV ACGT 1 cut(s) 693
HpyF10VI GCNNNNNNNGC 4 cut(s) 182, 585, 751, 914
HpyF3I CTNAG 4 cut(s) 374, 659, 713, 1080
HpySE526I ACGT 1 cut(s) 693
Hsp92II CATG 6 cut(s) 145, 346, 547, 876, 950, 1098
HspAI GCGC 3 cut(s) 547, 686, 1067
KroI GCCGGC 1 cut(s) 917
KroNI GCCGGC 1 cut(s) 919
Kzo9I GATC 3 cut(s) 329, 790, 910
LmnI GCTCC 5 cut(s) 128, 167, 173, 242, 901
Lsp1109I GCAGC 2 cut(s) 608, 872
LweI GCATC 4 cut(s) 232, 655, 673, 911
MaeII ACGT 1 cut(s) 693
MaeIII GTNAC 2 cut(s) 284, 1205
MalI GATC 3 cut(s) 331, 792, 912
MboI GATC 3 cut(s) 329, 790, 910
MboII GAAGA 5 cut(s) 401, 479, 536, 557, 799
MfeI CAATTG 1 cut(s) 263
MflI RGATCY 1 cut(s) 910
MluCI AATT 8 cut(s) 263, 298, 488, 718, 973, 1054, 1210, 1243
MlyI GAGTC 1 cut(s) 556
MmeI TCCRAC 2 cut(s) 106, 1129
MnlI CCTC 7 cut(s) 97, 167, 262, 266, 269, 488, 1077
MroNI GCCGGC 1 cut(s) 917
MseI TTAA 4 cut(s) 78, 941, 1053, 1246
MslI CAYNNNNRTG 1 cut(s) 612
MspI CCGG 1 cut(s) 918
MspR9I CCNGG 3 cut(s) 165, 210, 322
MunI CAATTG 1 cut(s) 263
Mva1269I GAATGC 1 cut(s) 1012
MvaI CCWGG 3 cut(s) 165, 210, 322
MwoI GCNNNNNNNGC 4 cut(s) 182, 585, 751, 914
NaeI GCCGGC 1 cut(s) 919
NdeII GATC 3 cut(s) 329, 790, 910
NgoMIV GCCGGC 1 cut(s) 917
NlaIII CATG 6 cut(s) 145, 346, 547, 876, 950, 1098
NlaIV GGNNCC 1 cut(s) 175
NmuCI GTSAC 1 cut(s) 1205
NsbI TGCGCA 1 cut(s) 1068
NspI RCATGY 1 cut(s) 547
PaeI GCATGC 1 cut(s) 547
PceI AGGCCT 1 cut(s) 107
PctI GAATGC 1 cut(s) 1012
PdiI GCCGGC 1 cut(s) 919
PfeI GAWTC 7 cut(s) 116, 339, 869, 987, 994, 1020, 1109
PflMI CCANNNNNTGG 3 cut(s) 170, 1121, 1225
PfoI TCCNGGA 1 cut(s) 163
PkrI GCNGC 2 cut(s) 598, 862
PleI GAGTC 1 cut(s) 556
PpsI GAGTC 1 cut(s) 556
PshBI ATTAAT 1 cut(s) 1053
Psp6I CCWGG 3 cut(s) 163, 208, 320
PspGI CCWGG 3 cut(s) 163, 208, 320
PspN4I GGNNCC 1 cut(s) 175
PstNI CAGNNNCTG 2 cut(s) 170, 914
PsuI RGATCY 1 cut(s) 910
RsaI GTAC 1 cut(s) 958
RsaNI GTAC 1 cut(s) 957
RseI CAYNNNNRTG 1 cut(s) 612
SaqAI TTAA 4 cut(s) 78, 941, 1053, 1246
SatI GCNGC 2 cut(s) 597, 861
Sau3AI GATC 3 cut(s) 329, 790, 910
SchI GAGTC 1 cut(s) 556
ScrFI CCNGG 3 cut(s) 165, 210, 322
SfaNI GCATC 4 cut(s) 232, 655, 673, 911
SmiMI CAYNNNNRTG 1 cut(s) 612
SphI GCATGC 1 cut(s) 547
Sse9I AATT 8 cut(s) 263, 298, 488, 718, 973, 1054, 1210, 1243
SseBI AGGCCT 1 cut(s) 107
SsiI CCGC 2 cut(s) 325, 588
StuI AGGCCT 1 cut(s) 107
StyD4I CCNGG 3 cut(s) 163, 208, 320
StyI CCWWGG 1 cut(s) 120
TaaI ACNGT 4 cut(s) 93, 464, 611, 846
TaiI ACGT 1 cut(s) 696
TaqII GACCGA 1 cut(s) 1182
TasI AATT 8 cut(s) 263, 298, 488, 718, 973, 1054, 1210, 1243
TatI WGTACW 1 cut(s) 956
TfiI GAWTC 7 cut(s) 116, 339, 869, 987, 994, 1020, 1109
Tru1I TTAA 4 cut(s) 78, 941, 1053, 1246
Tru9I TTAA 4 cut(s) 78, 941, 1053, 1246
TscAI CASTG 2 cut(s) 614, 849
TseFI GTSAC 1 cut(s) 1205
TseI GCWGC 2 cut(s) 596, 860
Tsp45I GTSAC 1 cut(s) 1205
TspDTI ATGAA 4 cut(s) 17, 96, 331, 861
TspRI CASTG 2 cut(s) 614, 849
Van91I CCANNNNNTGG 3 cut(s) 170, 1121, 1225
VspI ATTAAT 1 cut(s) 1053
XapI RAATTY 1 cut(s) 718
XceI RCATGY 1 cut(s) 547
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.