Prupe.7G057000_v2.0.a1

Belongs to the class-I aminoacyl-tRNA synthetase family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
9628795 .. 9632757
3963 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G057000.1

Sequence Viewer

Length: 1203 bp
ATGGAGAAGAGAGAGGGAGAAGGAGAAGGTGAAGAAGAACAGGTAGTGAATCCATGGACGGTGTCGGCTAAAGGTGGCGGGAAAATCGACTACGACAAGCTCATTGACCAGTTCGGCTGTCAGAGGATCGACCAGTCGCTCGTCGACCGTATCCACCGCCTCACCTCACGTACTCCCCACGTGTTTCTCCGCCGCGGCGTCTTCTTCGCCCACAGGGACTTGAATGAAATTCTTGATGCTCATGAGAGGGGAGAGAAGTTCTATTTGTACACAGGAAGAGGACCTTCCTCTGAGGCATTGCATTTGGGTCATCTTATCCCCTTCATGTTCACTAAATATTTGCAAGAGGCCTTCAGGGTTCCTCTTGTTATTCAACTTACTGATGATGAGAAATGCATGTGGAAAGATCTGACCGTGGAAGAGAGCCAGAGACTCGCCAGGGAGAATGCCAAGGACATTATTGCTTGTGGTTTTGACGTAACAAGAACCTTCATTTTCTCTGATTTTGATTATGTTGGTGGTGCTTTCTACAAGAACATGGTGAAGGTTGGAAAGTGTGTCACATATAATAAGGCTGTTGGAATTTTTGGTTTCACCGGTGAAGATCATATTGGAAAAATTAGTTTTCCACCTGTGCAGGCAGTTCCATCATTTCCAAGTTCATTTCCACATCTTTTCGGTGGCCAAGACAATCTTCGTTGCTTAATTCCTTGCGCGATTGACCAGGATCCTTATTTTAGAATGACACGAGATGTCGCTCCACGGATTGGATACCAGAAACCTGCGTTGATTGAGTCTTCTTTCTTCCCTGCCATGCAGGGAGAGACCGCTAAAATGTCGGCCAGTGATCCAAATTCTGCCATTTATGTAACTGATTCTGCAAAGGAAATTAAGAACAAGATAAACAGGTACGCATTTTCTGGTGGACAAGATTCAATAGAGAAACATAGAGAACTTGGAGCAAATCTCGAGGTAGATATACCATTCAAATATCTCAGTTTTTTCCTGGATGATGACGCTAAACTCGAAGAGATAAGGAAGGAGTATGGTGCAGGACGCATGCTAACAGGTGAAGTTAAGCAACTACTTATTCAGGTTTTGACTGAACTAGTTGAAAGACATCGTAGGGCTAGAGCTGCTGTGACTGATGAGATGGTGGATGCATTTATGGCAGTGAGGCCCCTGCCCAATATGTTCAACTGA

Protein Analysis

401

Amino Acids

45.44

Weight (kDa)

5.88

Isoelectric Point (pI)

41.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 790
AccB7I CCANNNNNTGG 1 cut(s) 767
AccI GTMKAC 1 cut(s) 144
AccII CGCG 2 cut(s) 195, 716
AciI CCGC 6 cut(s) 78, 157, 190, 193, 195, 828
AclWI GGATC 4 cut(s) 134, 722, 735, 842
AcoI YGGCCR 2 cut(s) 682, 840
AcsI RAATTY 3 cut(s) 228, 582, 853
AcuI CTGAAG 1 cut(s) 337
AcvI CACGTG 1 cut(s) 181
AcyI GRCGYC 1 cut(s) 198
AfaI GTAC 3 cut(s) 172, 269, 911
AfiI CCNNNNNNNGG 1 cut(s) 767
AflIII ACRYGT 1 cut(s) 180
AgeI ACCGGT 1 cut(s) 596
AgsI TTSAA 6 cut(s) 223, 374, 936, 988, 1115, 1198
AhlI ACTAGT 1 cut(s) 1108
AjnI CCWGG 3 cut(s) 437, 723, 1005
AjuI GAANNNNNNNTTGG 4 cut(s) 594, 626, 678, 710
AluBI AGCT 2 cut(s) 100, 1136
AluI AGCT 2 cut(s) 100, 1136
Alw26I GTCTC 2 cut(s) 424, 818
AlwI GGATC 4 cut(s) 134, 722, 735, 842
Ama87I CYCGRG 1 cut(s) 968
AoxI GGCC 4 cut(s) 348, 682, 840, 1178
ApeKI GCWGC 1 cut(s) 1136
ApoI RAATTY 3 cut(s) 228, 582, 853
AsiGI ACCGGT 1 cut(s) 596
AspLEI GCGC 1 cut(s) 716
AspS9I GGNCC 2 cut(s) 281, 1179
AsuHPI GGTGA 6 cut(s) 41, 154, 553, 586, 611, 1082
AvaI CYCGRG 1 cut(s) 968
AvaII GGWCC 1 cut(s) 281
BalI TGGCCA 1 cut(s) 684
BamHI GGATCC 1 cut(s) 727
BauI CACGAG 1 cut(s) 747
BbrPI CACGTG 1 cut(s) 181
BbsI GAAGAC 2 cut(s) 193, 789
BbvI GCAGC 1 cut(s) 1123
BccI CCATC 2 cut(s) 655, 1147
BciT130I CCWGG 3 cut(s) 439, 725, 1007
BciVI GTATCC 2 cut(s) 161, 764
BcoDI GTCTC 2 cut(s) 424, 818
BcuI ACTAGT 1 cut(s) 1108
BfaI CTAG 2 cut(s) 1109, 1131
BfuAI ACCTGC 1 cut(s) 790
BfuI GTATCC 2 cut(s) 161, 764
BglII AGATCT 1 cut(s) 406
BisI GCNGC 3 cut(s) 193, 196, 1137
BlsI GCNGC 3 cut(s) 194, 197, 1138
Bme1390I CCNGG 3 cut(s) 439, 725, 1007
Bme18I GGWCC 1 cut(s) 281
BmeT110I CYCGRG 1 cut(s) 968
BmgT120I GGNCC 2 cut(s) 281, 1179
BmiI GGNNCC 3 cut(s) 360, 729, 1181
BmrFI CCNGG 3 cut(s) 439, 725, 1007
BmsI GCATC 2 cut(s) 226, 1150
BpiI GAAGAC 2 cut(s) 193, 789
BplI GAGNNNNNCTC 2 cut(s) 951, 983
BsaAI YACGTR 2 cut(s) 170, 181
BsaHI GRCGYC 1 cut(s) 198
BsaI GGTCTC 1 cut(s) 818
BsaJI CCNNGG 6 cut(s) 53, 193, 414, 438, 450, 761
BsaWI WCCGGW 1 cut(s) 596
Bsc4I CCNNNNNNNGG 1 cut(s) 767
Bse118I RCCGGY 1 cut(s) 596
Bse1I ACTGG 3 cut(s) 109, 133, 843
Bse3DI GCAATG 1 cut(s) 296
BseBI CCWGG 3 cut(s) 439, 725, 1007
BseDI CCNNGG 6 cut(s) 53, 193, 414, 438, 450, 761
BseGI GGATG 2 cut(s) 1015, 1165
BseLI CCNNNNNNNGG 1 cut(s) 767
BseMI GCAATG 1 cut(s) 296
BseMII CTCAG 2 cut(s) 282, 1009
BseNI ACTGG 3 cut(s) 109, 133, 843
BseXI GCAGC 1 cut(s) 1123
BsgI GTGCAG 2 cut(s) 656, 1071
Bsh1236I CGCG 2 cut(s) 195, 716
Bsh1285I CGRYCG 1 cut(s) 148
BshFI GGCC 4 cut(s) 350, 684, 842, 1180
BshTI ACCGGT 1 cut(s) 596
BsiEI CGRYCG 1 cut(s) 148
BsiHKCI CYCGRG 1 cut(s) 968
BsiSI CCGG 1 cut(s) 597
BslFI GGGAC 1 cut(s) 230
BslI CCNNNNNNNGG 1 cut(s) 767
BsmAI GTCTC 2 cut(s) 424, 818
BsmFI GGGAC 1 cut(s) 230
BsmI GAATGC 1 cut(s) 451
BsnI GGCC 4 cut(s) 350, 684, 842, 1180
Bso31I GGTCTC 1 cut(s) 818
BsoBI CYCGRG 1 cut(s) 968
Bsp1407I TGTACA 1 cut(s) 267
Bsp143I GATC 5 cut(s) 126, 406, 604, 727, 847
Bsp19I CCATGG 1 cut(s) 53
BspACI CCGC 6 cut(s) 78, 157, 190, 193, 195, 828
BspANI GGCC 4 cut(s) 350, 684, 842, 1180
BspCNI CTCAG 2 cut(s) 283, 1008
BspFNI CGCG 2 cut(s) 195, 716
BspHI TCATGA 1 cut(s) 241
BspLI GGNNCC 3 cut(s) 360, 729, 1181
BspMI ACCTGC 1 cut(s) 790
BspPI GGATC 4 cut(s) 134, 722, 735, 842
BspTNI GGTCTC 1 cut(s) 818
BsrDI GCAATG 1 cut(s) 296
BsrFI RCCGGY 1 cut(s) 596
BsrGI TGTACA 1 cut(s) 267
BsrI ACTGG 3 cut(s) 109, 133, 843
BssAI RCCGGY 1 cut(s) 596
BssECI CCNNGG 6 cut(s) 53, 193, 414, 438, 450, 761
BssMI GATC 5 cut(s) 126, 406, 604, 727, 847
BssNI GRCGYC 1 cut(s) 198
BssSI CACGAG 1 cut(s) 747
BssT1I CCWWGG 2 cut(s) 53, 450
Bst2BI CACGAG 1 cut(s) 747
Bst2UI CCWGG 3 cut(s) 439, 725, 1007
Bst4CI ACNGT 3 cut(s) 61, 149, 415
Bst6I CTCTTC 4 cut(s) 2, 271, 414, 1023
BstACI GRCGYC 1 cut(s) 198
BstAUI TGTACA 1 cut(s) 267
BstBAI YACGTR 2 cut(s) 170, 181
BstC8I GCNNGC 2 cut(s) 639, 1061
BstDEI CTNAG 2 cut(s) 291, 995
BstDSI CCRYGG 4 cut(s) 53, 193, 414, 761
BstF5I GGATG 2 cut(s) 1015, 1165
BstFNI CGCG 2 cut(s) 195, 716
BstHHI GCGC 1 cut(s) 716
BstKTI GATC 5 cut(s) 129, 409, 607, 730, 850
BstMAI GTCTC 2 cut(s) 424, 818
BstMBI GATC 5 cut(s) 126, 406, 604, 727, 847
BstMCI CGRYCG 1 cut(s) 148
BstMWI GCNNNNNNNGC 2 cut(s) 1136, 1169
BstNI CCWGG 3 cut(s) 439, 725, 1007
BstNSI RCATGY 2 cut(s) 400, 1063
BstSCI CCNGG 3 cut(s) 437, 723, 1005
BstUI CGCG 2 cut(s) 195, 716
BstV1I GCAGC 1 cut(s) 1123
BstV2I GAAGAC 2 cut(s) 193, 789
BstX2I RGATCY 2 cut(s) 406, 727
BstYI RGATCY 2 cut(s) 406, 727
BsuI GTATCC 2 cut(s) 161, 764
BsuRI GGCC 4 cut(s) 350, 684, 842, 1180
BtgI CCRYGG 4 cut(s) 53, 193, 414, 761
BtsCI GGATG 2 cut(s) 1015, 1165
BtsI GCAGTG 1 cut(s) 1179
BtsIMutI CAGTG 2 cut(s) 850, 1179
BveI ACCTGC 1 cut(s) 790
Cac8I GCNNGC 2 cut(s) 639, 1061
CciI TCATGA 1 cut(s) 241
CfoI GCGC 1 cut(s) 716
Cfr10I RCCGGY 1 cut(s) 596
Cfr13I GGNCC 2 cut(s) 281, 1179
Cfr42I CCGCGG 1 cut(s) 196
CseI GACGC 3 cut(s) 187, 1025, 1065
Csp6I GTAC 3 cut(s) 171, 268, 910
CspAI ACCGGT 1 cut(s) 596
CviAII CATG 7 cut(s) 54, 242, 325, 397, 538, 814, 1060
CviQI GTAC 3 cut(s) 171, 268, 910
DdeI CTNAG 2 cut(s) 291, 995
DpnI GATC 5 cut(s) 128, 408, 606, 729, 849
DpnII GATC 5 cut(s) 126, 406, 604, 727, 847
EaeI YGGCCR 2 cut(s) 682, 840
Eam1104I CTCTTC 4 cut(s) 2, 271, 414, 1023
EarI CTCTTC 4 cut(s) 2, 271, 414, 1023
EciI GGCGGA 1 cut(s) 179
Eco130I CCWWGG 2 cut(s) 53, 450
Eco147I AGGCCT 1 cut(s) 350
Eco31I GGTCTC 1 cut(s) 818
Eco47I GGWCC 1 cut(s) 281
Eco57I CTGAAG 1 cut(s) 337
Eco72I CACGTG 1 cut(s) 181
Eco88I CYCGRG 1 cut(s) 968
EcoO109I RGGNCCY 2 cut(s) 281, 1179
EcoRII CCWGG 3 cut(s) 437, 723, 1005
EcoT14I CCWWGG 2 cut(s) 53, 450
EcoT22I ATGCAT 2 cut(s) 398, 1165
ErhI CCWWGG 2 cut(s) 53, 450
FaeI CATG 7 cut(s) 57, 245, 328, 400, 541, 817, 1063
FalI AAGNNNNNCTT 4 cut(s) 268, 300, 678, 710
FaqI GGGAC 1 cut(s) 230
FatI CATG 7 cut(s) 53, 241, 324, 396, 537, 813, 1059
FauI CCCGC 1 cut(s) 71
FblI GTMKAC 1 cut(s) 144
Fnu4HI GCNGC 3 cut(s) 193, 196, 1137
FokI GGATG 2 cut(s) 1022, 1172
Fsp4HI GCNGC 3 cut(s) 193, 196, 1137
FspBI CTAG 2 cut(s) 1109, 1131
GlaI GCGC 1 cut(s) 715
GluI GCNGC 3 cut(s) 193, 196, 1137
HaeIII GGCC 4 cut(s) 350, 684, 842, 1180
HapII CCGG 1 cut(s) 597
HgaI GACGC 3 cut(s) 187, 1025, 1065
HhaI GCGC 1 cut(s) 716
Hin1I GRCGYC 1 cut(s) 198
Hin1II CATG 7 cut(s) 57, 245, 328, 400, 541, 817, 1063
Hin6I GCGC 1 cut(s) 714
HinP1I GCGC 1 cut(s) 714
HincII GTYRAC 1 cut(s) 145
HindII GTYRAC 1 cut(s) 145
HinfI GANTC 5 cut(s) 49, 432, 794, 875, 932
HpaII CCGG 1 cut(s) 597
HphI GGTGA 6 cut(s) 41, 154, 553, 586, 611, 1082
Hpy166II GTNNAC 4 cut(s) 145, 270, 330, 926
Hpy188I TCNGA 4 cut(s) 123, 292, 411, 502
Hpy188III TCNNGA 3 cut(s) 233, 242, 968
Hpy8I GTNNAC 4 cut(s) 145, 270, 330, 926
Hpy99I CGWCG 1 cut(s) 146
HpyAV CCTTC 8 cut(s) 14, 20, 294, 331, 361, 499, 538, 1033
HpyCH4III ACNGT 3 cut(s) 61, 149, 415
HpyCH4IV ACGT 3 cut(s) 169, 180, 477
HpyCH4V TGCA 8 cut(s) 301, 343, 396, 637, 817, 881, 1052, 1163
HpyF10VI GCNNNNNNNGC 2 cut(s) 1136, 1169
HpyF3I CTNAG 2 cut(s) 291, 995
HpySE526I ACGT 3 cut(s) 169, 180, 477
Hsp92I GRCGYC 1 cut(s) 198
Hsp92II CATG 7 cut(s) 57, 245, 328, 400, 541, 817, 1063
HspAI GCGC 1 cut(s) 714
KspI CCGCGG 1 cut(s) 196
Kzo9I GATC 5 cut(s) 126, 406, 604, 727, 847
LmnI GCTCC 2 cut(s) 763, 959
Lsp1109I GCAGC 1 cut(s) 1123
LweI GCATC 2 cut(s) 226, 1150
MaeI CTAG 2 cut(s) 1109, 1131
MaeII ACGT 3 cut(s) 169, 180, 477
MaeIII GTNAC 4 cut(s) 478, 559, 868, 1141
MalI GATC 5 cut(s) 128, 408, 606, 729, 849
MboI GATC 5 cut(s) 126, 406, 604, 727, 847
MflI RGATCY 2 cut(s) 406, 727
MlsI TGGCCA 1 cut(s) 684
MluCI AATT 6 cut(s) 228, 582, 618, 705, 853, 888
MluNI TGGCCA 1 cut(s) 684
MlyI GAGTC 2 cut(s) 426, 803
MmeI TCCRAC 2 cut(s) 529, 559
Mox20I TGGCCA 1 cut(s) 684
Mph1103I ATGCAT 2 cut(s) 398, 1165
MscI TGGCCA 1 cut(s) 684
MseI TTAA 3 cut(s) 704, 891, 1077
Msp20I TGGCCA 1 cut(s) 684
MspA1I CMGCKG 1 cut(s) 195
MspI CCGG 1 cut(s) 597
MspR9I CCNGG 3 cut(s) 439, 725, 1007
Mva1269I GAATGC 1 cut(s) 451
MvaI CCWGG 3 cut(s) 439, 725, 1007
MvnI CGCG 2 cut(s) 195, 716
MwoI GCNNNNNNNGC 2 cut(s) 1136, 1169
NcoI CCATGG 1 cut(s) 53
NdeII GATC 5 cut(s) 126, 406, 604, 727, 847
NlaIII CATG 7 cut(s) 57, 245, 328, 400, 541, 817, 1063
NlaIV GGNNCC 3 cut(s) 360, 729, 1181
NmuCI GTSAC 2 cut(s) 559, 1141
NsiI ATGCAT 2 cut(s) 398, 1165
NspI RCATGY 2 cut(s) 400, 1063
PaeI GCATGC 1 cut(s) 1063
PaeR7I CTCGAG 1 cut(s) 968
PagI TCATGA 1 cut(s) 241
PceI AGGCCT 1 cut(s) 350
PcsI WCGNNNNNNNCGW 1 cut(s) 1023
PctI GAATGC 1 cut(s) 451
PfeI GAWTC 3 cut(s) 49, 875, 932
PflFI GACNNNGTC 1 cut(s) 61
PflMI CCANNNNNTGG 1 cut(s) 767
PfoI TCCNGGA 1 cut(s) 1005
PinAI ACCGGT 1 cut(s) 596
PkrI GCNGC 3 cut(s) 194, 197, 1138
PleI GAGTC 2 cut(s) 426, 802
PmaCI CACGTG 1 cut(s) 181
PmlI CACGTG 1 cut(s) 181
PpsI GAGTC 2 cut(s) 426, 802
Ppu21I YACGTR 2 cut(s) 170, 181
PpuMI RGGWCCY 1 cut(s) 281
Psp5II RGGWCCY 1 cut(s) 281
Psp6I CCWGG 3 cut(s) 437, 723, 1005
PspCI CACGTG 1 cut(s) 181
PspGI CCWGG 3 cut(s) 437, 723, 1005
PspN4I GGNNCC 3 cut(s) 360, 729, 1181
PspPI GGNCC 2 cut(s) 281, 1179
PspPPI RGGWCCY 1 cut(s) 281
PsuI RGATCY 2 cut(s) 406, 727
PsyI GACNNNGTC 1 cut(s) 61
RsaI GTAC 3 cut(s) 172, 269, 911
RsaNI GTAC 3 cut(s) 171, 268, 910
SacII CCGCGG 1 cut(s) 196
SalI GTCGAC 1 cut(s) 143
SaqAI TTAA 3 cut(s) 704, 891, 1077
SatI GCNGC 3 cut(s) 193, 196, 1137
Sau3AI GATC 5 cut(s) 126, 406, 604, 727, 847
Sau96I GGNCC 2 cut(s) 281, 1179
SchI GAGTC 2 cut(s) 426, 803
ScrFI CCNGG 3 cut(s) 439, 725, 1007
SfaNI GCATC 2 cut(s) 226, 1150
Sfr274I CTCGAG 1 cut(s) 968
Sfr303I CCGCGG 1 cut(s) 196
SgrAI CRCCGGYG 1 cut(s) 596
SgrBI CCGCGG 1 cut(s) 196
SinI GGWCC 1 cut(s) 281
SlaI CTCGAG 1 cut(s) 968
SmlI CTYRAG 1 cut(s) 968
SmoI CTYRAG 1 cut(s) 968
SpeI ACTAGT 1 cut(s) 1108
SphI GCATGC 1 cut(s) 1063
Sse9I AATT 6 cut(s) 228, 582, 618, 705, 853, 888
SseBI AGGCCT 1 cut(s) 350
SsiI CCGC 6 cut(s) 78, 157, 190, 193, 195, 828
SspI AATATT 1 cut(s) 338
SspMI CTAG 2 cut(s) 1109, 1131
StuI AGGCCT 1 cut(s) 350
StyD4I CCNGG 3 cut(s) 437, 723, 1005
StyI CCWWGG 2 cut(s) 53, 450
TaaI ACNGT 3 cut(s) 61, 149, 415
TaiI ACGT 3 cut(s) 172, 183, 480
TaqI TCGA 5 cut(s) 87, 129, 144, 969, 1026
TasI AATT 6 cut(s) 228, 582, 618, 705, 853, 888
TatI WGTACW 1 cut(s) 267
TauI GCSGC 2 cut(s) 195, 198
TfiI GAWTC 3 cut(s) 49, 875, 932
Tru1I TTAA 3 cut(s) 704, 891, 1077
Tru9I TTAA 3 cut(s) 704, 891, 1077
TscAI CASTG 2 cut(s) 850, 1179
TseFI GTSAC 2 cut(s) 559, 1141
TseI GCWGC 1 cut(s) 1136
Tsp45I GTSAC 2 cut(s) 559, 1141
TspDTI ATGAA 4 cut(s) 240, 313, 481, 651
TspGWI ACGGA 1 cut(s) 778
TspRI CASTG 2 cut(s) 850, 1179
Tth111I GACNNNGTC 1 cut(s) 61
Van91I CCANNNNNTGG 1 cut(s) 767
VpaK11BI GGWCC 1 cut(s) 281
XapI RAATTY 3 cut(s) 228, 582, 853
XceI RCATGY 2 cut(s) 400, 1063
XhoI CTCGAG 1 cut(s) 968
XmiI GTMKAC 1 cut(s) 144
XspI CTAG 2 cut(s) 1109, 1131
Zsp2I ATGCAT 2 cut(s) 398, 1165
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.