Rmu_sc0039697.1_g000001

Belongs to the class-I aminoacyl-tRNA synthetase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0039697.1
Physical Location & Seq
Forward (+)
1 .. 1779
1779 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0039697.1_g000001.1.cds

Sequence Viewer

Length: 228 bp
ggagaaacaggaaaaatgtcggctagtgatccgaattctgccatctacgtaactgattctgcaaaggatattaagagcaaggagtatggtgcaggtcgaatgttgacaggggaaatgaagcagaggctcattcaagttttgacagaaattgtggagagacatcgtagggctagagctgctgtcactgatgaggtaattaattatcttcttgtcaacagttttgaatga

Protein Analysis

75

Amino Acids

8.36

Weight (kDa)

6.81

Isoelectric Point (pI)

27.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 83
AclWI GGATC 1 cut(s) 23
AcsI RAATTY 1 cut(s) 34
AgsI TTSAA 2 cut(s) 134, 224
AluBI AGCT 1 cut(s) 176
AluI AGCT 1 cut(s) 176
Alw26I GTCTC 1 cut(s) 151
AlwI GGATC 1 cut(s) 23
ApeKI GCWGC 1 cut(s) 176
ApoI RAATTY 1 cut(s) 34
AseI ATTAAT 1 cut(s) 198
BbvI GCAGC 1 cut(s) 163
BccI CCATC 1 cut(s) 50
BcoDI GTCTC 1 cut(s) 151
BfaI CTAG 2 cut(s) 24, 171
BfuAI ACCTGC 1 cut(s) 83
BisI GCNGC 1 cut(s) 177
BlsI GCNGC 1 cut(s) 178
BsaAI YACGTR 1 cut(s) 49
BseXI GCAGC 1 cut(s) 163
BsgI GTGCAG 1 cut(s) 111
BsmAI GTCTC 1 cut(s) 151
Bsp143I GATC 1 cut(s) 28
BspMI ACCTGC 1 cut(s) 83
BspPI GGATC 1 cut(s) 23
BssMI GATC 1 cut(s) 28
Bst4CI ACNGT 1 cut(s) 218
BstBAI YACGTR 1 cut(s) 49
BstKTI GATC 1 cut(s) 31
BstMAI GTCTC 1 cut(s) 151
BstMBI GATC 1 cut(s) 28
BstMWI GCNNNNNNNGC 1 cut(s) 176
BstSNI TACGTA 1 cut(s) 49
BstV1I GCAGC 1 cut(s) 163
BtsIMutI CAGTG 1 cut(s) 183
BveI ACCTGC 1 cut(s) 83
CviJI RGCY 4 cut(s) 23, 127, 170, 176
CviKI_1 RGCY 4 cut(s) 23, 127, 170, 176
DpnI GATC 1 cut(s) 30
DpnII GATC 1 cut(s) 28
Eco105I TACGTA 1 cut(s) 49
EcoRI GAATTC 1 cut(s) 34
FaiI YATR 1 cut(s) 87
Fnu4HI GCNGC 1 cut(s) 177
Fsp4HI GCNGC 1 cut(s) 177
FspBI CTAG 2 cut(s) 24, 171
GluI GCNGC 1 cut(s) 177
HincII GTYRAC 2 cut(s) 105, 214
HindII GTYRAC 2 cut(s) 105, 214
HinfI GANTC 1 cut(s) 56
Hpy166II GTNNAC 2 cut(s) 105, 214
Hpy188I TCNGA 1 cut(s) 33
Hpy8I GTNNAC 2 cut(s) 105, 214
HpyCH4III ACNGT 1 cut(s) 218
HpyCH4IV ACGT 1 cut(s) 48
HpyCH4V TGCA 2 cut(s) 62, 92
HpyF10VI GCNNNNNNNGC 1 cut(s) 176
HpySE526I ACGT 1 cut(s) 48
Kzo9I GATC 1 cut(s) 28
LpnPI CCDG 2 cut(s) 78, 93
Lsp1109I GCAGC 1 cut(s) 163
MaeI CTAG 2 cut(s) 24, 171
MaeII ACGT 1 cut(s) 48
MaeIII GTNAC 2 cut(s) 49, 181
MalI GATC 1 cut(s) 30
MboI GATC 1 cut(s) 28
MboII GAAGA 1 cut(s) 197
MluCI AATT 4 cut(s) 34, 147, 195, 199
MnlI CCTC 2 cut(s) 117, 184
MseI TTAA 2 cut(s) 72, 198
MwoI GCNNNNNNNGC 1 cut(s) 176
NdeII GATC 1 cut(s) 28
NmuCI GTSAC 1 cut(s) 181
PfeI GAWTC 1 cut(s) 56
PkrI GCNGC 1 cut(s) 178
Ppu21I YACGTR 1 cut(s) 49
PshBI ATTAAT 1 cut(s) 198
SaqAI TTAA 2 cut(s) 72, 198
SatI GCNGC 1 cut(s) 177
Sau3AI GATC 1 cut(s) 28
SetI ASST 4 cut(s) 51, 97, 178, 195
SgeI CNNG 8 cut(s) 21, 36, 91, 105, 120, 146, 183, 221
SnaBI TACGTA 1 cut(s) 49
Sse9I AATT 4 cut(s) 34, 147, 195, 199
SspMI CTAG 2 cut(s) 24, 171
TaaI ACNGT 1 cut(s) 218
TaiI ACGT 1 cut(s) 51
TaqI TCGA 1 cut(s) 97
TasI AATT 4 cut(s) 34, 147, 195, 199
TfiI GAWTC 1 cut(s) 56
Tru1I TTAA 2 cut(s) 72, 198
Tru9I TTAA 2 cut(s) 72, 198
TscAI CASTG 1 cut(s) 190
TseFI GTSAC 1 cut(s) 181
TseI GCWGC 1 cut(s) 176
Tsp45I GTSAC 1 cut(s) 181
TspDTI ATGAA 1 cut(s) 131
TspRI CASTG 1 cut(s) 190
VspI ATTAAT 1 cut(s) 198
XapI RAATTY 1 cut(s) 34
XspI CTAG 2 cut(s) 24, 171
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.