Rh7DG318200

Belongs to the class-I aminoacyl-tRNA synthetase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Forward (+)
37630486 .. 37630992
507 bp
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UTR
Exon/CDS
Intron
Rh7DG318200.1

Sequence Viewer

Length: 507 bp
ATGACACGAGATGTTGCTCCACGCATTGGATATCAGAAATTTGCTTTGATCGAGTCTAGTTCTTCCCTGCCCTGCAGGGAGAAACAAGAAAAATGTCGGCTAGTGATCCAAATTCTGGCATATATATATATAACTGATTCCACAAAGGATATTACGAGAAAGATAAACAAGTTTACATTTTCAGGGGGACGAGATTCAATAGAGGAACACAGACAGAAGGGAGCAAGGTTCGACGTAGACATACCACACAAATATGAATACCTTCAGTTTTTCCTAGAGGATGACAGTGAACTCAATTACATAAAGAAGGCGTATGGTGTGGGATGCATGTTAACAGGTCAAGTAAAACAGCGGCTTATTGAAGTTTTGACTGAAATAGTAGAAACACATCGTCGTGCTAGGGCTGTTGTGACTGATGAGATGGTAGATGCATTTATGACAGTGAGGTCTCTACCTAATATATATGTTCAACTAAAGTTCCTTATAGGAAGAATATTACTCCAATGA

Protein Analysis

168

Amino Acids

19.57

Weight (kDa)

8.94

Isoelectric Point (pI)

51.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 445
AccB7I CCANNNNNTGG 2 cut(s) 26, 115
AccI GTMKAC 1 cut(s) 237
AciI CCGC 1 cut(s) 352
AclWI GGATC 1 cut(s) 100
AcsI RAATTY 2 cut(s) 38, 111
AcuI CTGAAG 1 cut(s) 248
AfiI CCNNNNNNNGG 2 cut(s) 26, 115
AgsI TTSAA 3 cut(s) 198, 362, 470
Alw26I GTCTC 1 cut(s) 453
AlwI GGATC 1 cut(s) 100
ApoI RAATTY 2 cut(s) 38, 111
Asp700I GAANNNNTTC 1 cut(s) 261
BauI CACGAG 1 cut(s) 6
BccI CCATC 1 cut(s) 415
BcoDI GTCTC 1 cut(s) 453
BfaI CTAG 4 cut(s) 57, 101, 275, 399
BfmI CTRYAG 1 cut(s) 73
BisI GCNGC 1 cut(s) 353
BlsI GCNGC 1 cut(s) 354
BmsI GCATC 2 cut(s) 314, 418
BsaI GGTCTC 1 cut(s) 453
Bsc4I CCNNNNNNNGG 2 cut(s) 26, 115
BseGI GGATG 2 cut(s) 286, 329
BseLI CCNNNNNNNGG 2 cut(s) 26, 115
BslFI GGGAC 1 cut(s) 201
BslI CCNNNNNNNGG 2 cut(s) 26, 115
BsmAI GTCTC 1 cut(s) 453
BsmFI GGGAC 1 cut(s) 201
Bso31I GGTCTC 1 cut(s) 453
Bsp143I GATC 2 cut(s) 48, 105
BspACI CCGC 1 cut(s) 352
BspMAI CTGCAG 1 cut(s) 77
BspPI GGATC 1 cut(s) 100
BspTNI GGTCTC 1 cut(s) 453
BssMI GATC 2 cut(s) 48, 105
BssSI CACGAG 1 cut(s) 6
Bst2BI CACGAG 1 cut(s) 6
Bst4CI ACNGT 2 cut(s) 287, 442
BstF5I GGATG 2 cut(s) 286, 329
BstKTI GATC 2 cut(s) 51, 108
BstMAI GTCTC 1 cut(s) 453
BstMBI GATC 2 cut(s) 48, 105
BstNSI RCATGY 1 cut(s) 331
BstSFI CTRYAG 1 cut(s) 73
BtsCI GGATG 2 cut(s) 286, 329
BtsIMutI CAGTG 2 cut(s) 292, 447
CviAII CATG 1 cut(s) 328
CviJI RGCY 3 cut(s) 100, 355, 404
CviKI_1 RGCY 3 cut(s) 100, 355, 404
DpnI GATC 2 cut(s) 50, 107
DpnII GATC 2 cut(s) 48, 105
DrdI GACNNNNNNGTC 1 cut(s) 445
DseDI GACNNNNNNGTC 1 cut(s) 445
Eco31I GGTCTC 1 cut(s) 453
Eco32I GATATC 1 cut(s) 32
Eco57I CTGAAG 1 cut(s) 248
EcoRV GATATC 1 cut(s) 32
EcoT22I ATGCAT 2 cut(s) 329, 433
FaeI CATG 1 cut(s) 331
FaqI GGGAC 1 cut(s) 201
FatI CATG 1 cut(s) 327
FblI GTMKAC 1 cut(s) 237
Fnu4HI GCNGC 1 cut(s) 353
FokI GGATG 2 cut(s) 293, 336
Fsp4HI GCNGC 1 cut(s) 353
FspBI CTAG 4 cut(s) 57, 101, 275, 399
GluI GCNGC 1 cut(s) 353
Hin1II CATG 1 cut(s) 331
HincII GTYRAC 1 cut(s) 333
HindII GTYRAC 1 cut(s) 333
HinfI GANTC 3 cut(s) 53, 137, 194
HpaI GTTAAC 1 cut(s) 333
Hpy166II GTNNAC 4 cut(s) 174, 238, 290, 333
Hpy188I TCNGA 1 cut(s) 36
Hpy8I GTNNAC 4 cut(s) 174, 238, 290, 333
Hpy99I CGWCG 2 cut(s) 236, 396
HpyAV CCTTC 3 cut(s) 211, 272, 301
HpyCH4III ACNGT 2 cut(s) 287, 442
HpyCH4IV ACGT 1 cut(s) 234
HpyCH4V TGCA 3 cut(s) 75, 327, 431
HpySE526I ACGT 1 cut(s) 234
Hsp92II CATG 1 cut(s) 331
KspAI GTTAAC 1 cut(s) 333
Kzo9I GATC 2 cut(s) 48, 105
LmnI GCTCC 2 cut(s) 22, 221
LpnPI CCDG 6 cut(s) 61, 80, 85, 101, 168, 321
LweI GCATC 2 cut(s) 314, 418
MaeI CTAG 4 cut(s) 57, 101, 275, 399
MaeII ACGT 1 cut(s) 234
MaeIII GTNAC 1 cut(s) 409
MalI GATC 2 cut(s) 50, 107
MboI GATC 2 cut(s) 48, 105
MboII GAAGA 2 cut(s) 54, 501
MluCI AATT 3 cut(s) 38, 111, 295
MlyI GAGTC 1 cut(s) 62
MnlI CCTC 3 cut(s) 196, 271, 438
Mph1103I ATGCAT 2 cut(s) 329, 433
MroXI GAANNNNTTC 1 cut(s) 261
MseI TTAA 1 cut(s) 332
MslI CAYNNNNRTG 2 cut(s) 252, 393
MspA1I CMGCKG 1 cut(s) 352
NdeII GATC 2 cut(s) 48, 105
NlaIII CATG 1 cut(s) 331
NmuCI GTSAC 1 cut(s) 409
NsiI ATGCAT 2 cut(s) 329, 433
NspI RCATGY 1 cut(s) 331
PdmI GAANNNNTTC 1 cut(s) 261
PfeI GAWTC 2 cut(s) 137, 194
PflMI CCANNNNNTGG 2 cut(s) 26, 115
PkrI GCNGC 1 cut(s) 354
PleI GAGTC 1 cut(s) 61
PpsI GAGTC 1 cut(s) 61
PstI CTGCAG 1 cut(s) 77
RseI CAYNNNNRTG 2 cut(s) 252, 393
SaqAI TTAA 1 cut(s) 332
SatI GCNGC 1 cut(s) 353
Sau3AI GATC 2 cut(s) 48, 105
SbfI CCTGCAGG 1 cut(s) 77
SchI GAGTC 1 cut(s) 62
SdaI CCTGCAGG 1 cut(s) 77
SetI ASST 6 cut(s) 230, 237, 264, 340, 449, 457
SfaNI GCATC 2 cut(s) 314, 418
SfcI CTRYAG 1 cut(s) 73
SmiMI CAYNNNNRTG 2 cut(s) 252, 393
Sse8387I CCTGCAGG 1 cut(s) 77
Sse9I AATT 3 cut(s) 38, 111, 295
SsiI CCGC 1 cut(s) 352
SspI AATATT 1 cut(s) 495
SspMI CTAG 4 cut(s) 57, 101, 275, 399
TaaI ACNGT 2 cut(s) 287, 442
TaiI ACGT 1 cut(s) 237
TaqI TCGA 2 cut(s) 51, 231
TasI AATT 3 cut(s) 38, 111, 295
TauI GCSGC 1 cut(s) 355
TfiI GAWTC 2 cut(s) 137, 194
Tru1I TTAA 1 cut(s) 332
Tru9I TTAA 1 cut(s) 332
TscAI CASTG 2 cut(s) 292, 447
TseFI GTSAC 1 cut(s) 409
Tsp45I GTSAC 1 cut(s) 409
TspDTI ATGAA 1 cut(s) 270
TspRI CASTG 2 cut(s) 292, 447
Van91I CCANNNNNTGG 2 cut(s) 26, 115
XapI RAATTY 2 cut(s) 38, 111
XceI RCATGY 1 cut(s) 331
XmiI GTMKAC 1 cut(s) 237
XmnI GAANNNNTTC 1 cut(s) 261
XspI CTAG 4 cut(s) 57, 101, 275, 399
Zsp2I ATGCAT 2 cut(s) 329, 433
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.