Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3D

Orthogroup ID

OG0001148

Physical Location & Seq

Genomic Coordinates Forward (+)

39011488 .. 39017522

Gene Structure 6035 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3DG345400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1197 bp

ATGGAGATAAAGGAAAATGGAGAAGAAGAGCAGCAGATTGTGAATCCATGGAAGGTGGAGGCCAAAGAAGGCGGCAAAATCGACTATGATAAGCTCATAGATCAGTTCGGTTGCCAGAGGATCGATCAATCTCTCGTCGAGCGTGTCCGCCGTCTCACCTCACGTGCTCCGCACGTTTTCCTCCGTCGCGACGTCTTCTTCGCTCACCGGGACTTCAATGAGATTCTGGATGCTTATGAGAGAGGAGAGAAGTTCTATTTGTACACAGGAAGAGGGCCTTCCTCAGAGGCTTTGCATTTGGGGCATCTCATCCCCTTCATGTTCACCAAATATTTGCAAGATGCCTTTAAGGTCCCTCTCGTTATACAACTTACTGACGATGAGAAATGTATGTGGAAAAATATCACAGTTGAAGTAAGCCAGAGACTTGCAAGGGAAAATGCTAAAGACATCATTGCTTGTGGTTTTGACATAACAAGAACCTTTATCTTCTCCGATTTTGATTATGTTGGTGGTGCCTTCTACAAGAACATGGTGAAGGTCGGAAAGTGTGTCACCTATAATAAGGTTGTTGGCATATTTGGTTTCACCGGTGAAGATCATATAGGAAAAGTTAGTTTTCCACCTGTACAGGCGGTACCATCATTTCCAAGTTCATTTCCACATCTCTTCTCTGGCCAAGATAATCTTCGTTGTTTAATACCCTGTGCGATTGACCAGGATCCTTATTTTAGAATGACCCGAGATGTTGCTCCACGCATTGGATATCACAAGCCTGCTTTAATTGAGTCTCTATTCTTCCCTGCCCTCCAGGGAGAAACAGGAAAAATGTCGGCTAGTGATCCGAATTCTGCCATCTACGTAACTGATTCTGCAAAGGATATTAAGAGCAAGATAAACAAGTTTGCATTTTCAGGGGGACAAGATACAATAGAGAAACACAGAGAGTTGGGAGCAGATCTCGAGGTAGACATTCCCTATAAATATCTGAAATTTTTTCTGGATGATGACATTGAGCTTGCTTATATAGGAAAGGAGTATGGTGCAGGTCGAATGTTGACAGGGGAAATGAAGCAGAGGCTCATTCAAGTTTTGACAGAAATTGTGGAGAGACATCGTAGGGCTAGAGCTGCTGTCACTGATGAGATGGTGGACGCATTTATGGCAGTGAGGCCCCTCCCAAACATGTTCGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004812 GO:0004830 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006436 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0016070 GO:0016874 GO:0016875 GO:0019538 GO:0019752 GO:0034641 GO:0034645 GO:0034660 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

tRNA-synt_1b

Protein Analysis

398

Amino Acids

45.5

Weight (kDa)

5.93

Isoelectric Point (pI)

41.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA-synt_1b	PF00579	82 - 368	3.7e-19	tRNA synthetases class I (W and Y)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0001148)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G04600 AT3G04600 AT3G04600
fragaria_vesca	FvH4_4g11950 FvH4_4g11950 FvH4_4g11950 FvH4_4g11950 FvH4_5g27321
malus_domestica	MD04G1236500.v1.1 MD12G1255800.v1.1
prunus_persica	Prupe.7G057000_v2.0.a1 Prupe.7G057800_v2.0.a1
pyrus_communis	pycom04g21040 pycom12g23440
rosa_chinensis	RchiOBHm_Chr3g0493481 RchiOBHm_Chr7g0219201 RchiOBHm_Chr7g0219221 RchiOBHm_Chr7g0223011
rosa_laevigata	RLG00000002003 RLG00000002302 RLG00000002303 RLG00000022713
rosa_multiflora	Rmu_sc0000868.1_g000014 Rmu_sc0006373.1_g000002 Rmu_sc0006514.1_g000024 Rmu_sc0007422.1_g000005 Rmu_sc0009785.1_g000024 Rmu_sc0039697.1_g000001
rosa_roxburghii	Rroxscaffold_3G00234440 Rroxscaffold_3G00236350 Rroxscaffold_3G00237890 Rroxscaffold_3G00237970 Rroxscaffold_3G00238030 Rroxscaffold_3G00238960 Rroxscaffold_3G00238970 Rroxscaffold_5G00377610 Rroxscaffold_6G00391570 Rroxscaffold_7G00199590 Rroxscaffold_7G00199600
rosa_rugosa	Rorug07G0177500 Rorug07G0177500 Rorug07G0212800
rosa_samantha	Rh3AG310200 Rh3BG346300 Rh3CG344200 Rh3DG345400 Rh7AG319000 Rh7AG326700 Rh7AG357900 Rh7BG310900 Rh7BG346100 Rh7CG376000 Rh7DG318100 Rh7DG318200 Rh7DG352800
rosa_wichuraiana	Rw3G027260 Rw7G027160 Rw7G030440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	195
Acc36I	ACCTGC	1 cut(s)	1037
Acc65I	GGTACC	1 cut(s)	637
AccB1I	GGYRCC	2 cut(s)	515, 637
AccB7I	CCANNNNNTGG	1 cut(s)	761
AccI	GTMKAC	1 cut(s)	969
AccII	CGCG	1 cut(s)	189
AciI	CCGC	4 cut(s)	72, 148, 170, 635
AclWI	GGATC	4 cut(s)	128, 716, 729, 836
AcoI	YGGCCR	1 cut(s)	676
AcsI	RAATTY	2 cut(s)	847, 992
AcvI	CACGTG	1 cut(s)	164
AcyI	GRCGYC	1 cut(s)	192
AfaI	GTAC	3 cut(s)	263, 630, 639
AfiI	CCNNNNNNNGG	1 cut(s)	761
AflIII	ACRYGT	1 cut(s)	1185
AgeI	ACCGGT	1 cut(s)	590
AgsI	TTSAA	3 cut(s)	217, 413, 1088
AjnI	CCWGG	2 cut(s)	717, 810
AjuI	GAANNNNNNNTTGG	2 cut(s)	672, 704
AluBI	AGCT	3 cut(s)	94, 1018, 1130
AluI	AGCT	3 cut(s)	94, 1018, 1130
Alw21I	GWGCWC	1 cut(s)	169
Alw26I	GTCTC	4 cut(s)	158, 418, 795, 1105
AlwI	GGATC	4 cut(s)	128, 716, 729, 836
Ama87I	CYCGRG	2 cut(s)	741, 962
AoxI	GGCC	4 cut(s)	60, 275, 676, 1172
ApeKI	GCWGC	2 cut(s)	31, 1130
ApoI	RAATTY	2 cut(s)	847, 992
ArsI	GACNNNNNNTTYG	2 cut(s)	182, 214
AsiGI	ACCGGT	1 cut(s)	590
Asp718I	GGTACC	1 cut(s)	637
AspS9I	GGNCC	3 cut(s)	275, 352, 1173
AsuC2I	CCSGG	1 cut(s)	209
AsuHPI	GGTGA	7 cut(s)	148, 197, 316, 547, 547, 580, 605
AvaI	CYCGRG	2 cut(s)	741, 962
AvaII	GGWCC	1 cut(s)	352
BalI	TGGCCA	1 cut(s)	678
BamHI	GGATCC	1 cut(s)	721
BanI	GGYRCC	2 cut(s)	515, 637
BbrPI	CACGTG	1 cut(s)	164
BbsI	GAAGAC	1 cut(s)	187
Bbv12I	GWGCWC	1 cut(s)	169
BbvI	GCAGC	2 cut(s)	43, 1117
BccI	CCATC	3 cut(s)	649, 863, 1141
BceAI	ACGGC	1 cut(s)	135
BciT130I	CCWGG	2 cut(s)	719, 812
BcnI	CCSGG	1 cut(s)	209
BcoDI	GTCTC	4 cut(s)	158, 418, 795, 1105
BfaI	CTAG	2 cut(s)	837, 1125
BfuAI	ACCTGC	1 cut(s)	1037
BglII	AGATCT	1 cut(s)	958
BisI	GCNGC	3 cut(s)	32, 73, 1131
BlsI	GCNGC	3 cut(s)	33, 74, 1132
Bme1390I	CCNGG	3 cut(s)	209, 719, 812
Bme18I	GGWCC	1 cut(s)	352
BmeT110I	CYCGRG	2 cut(s)	741, 962
BmgT120I	GGNCC	3 cut(s)	275, 352, 1173
BmiI	GGNNCC	5 cut(s)	354, 517, 639, 723, 1175
BmrFI	CCNGG	3 cut(s)	209, 719, 812
BmsI	GCATC	3 cut(s)	220, 313, 331
BpiI	GAAGAC	1 cut(s)	187
BplI	GAGNNNNNCTC	2 cut(s)	945, 977
BpmI	CTGGAG	1 cut(s)	794
BpuMI	CCSGG	1 cut(s)	209
Bsa29I	ATCGAT	1 cut(s)	123
BsaAI	YACGTR	2 cut(s)	164, 862
BsaHI	GRCGYC	1 cut(s)	192
BsaJI	CCNNGG	2 cut(s)	47, 811
BsaWI	WCCGGW	1 cut(s)	590
Bsc4I	CCNNNNNNNGG	1 cut(s)	761
Bse118I	RCCGGY	1 cut(s)	590
Bse3DI	GCAATG	1 cut(s)	453
BseBI	CCWGG	2 cut(s)	719, 812
BseCI	ATCGAT	1 cut(s)	123
BseDI	CCNNGG	2 cut(s)	47, 811
BseGI	GGATG	3 cut(s)	235, 309, 1009
BseLI	CCNNNNNNNGG	1 cut(s)	761
BseMI	GCAATG	1 cut(s)	453
BseMII	CTCAG	1 cut(s)	297
BseRI	GAGGAG	1 cut(s)	258
BseXI	GCAGC	2 cut(s)	43, 1117
BsgI	GTGCAG	1 cut(s)	1065
Bsh1236I	CGCG	1 cut(s)	189
BshFI	GGCC	4 cut(s)	62, 277, 678, 1174
BshNI	GGYRCC	2 cut(s)	515, 637
BshTI	ACCGGT	1 cut(s)	590
BshVI	ATCGAT	1 cut(s)	123
BsiHKAI	GWGCWC	1 cut(s)	169
BsiHKCI	CYCGRG	2 cut(s)	741, 962
BsiSI	CCGG	2 cut(s)	208, 591
BslFI	GGGAC	3 cut(s)	224, 338, 933
BslI	CCNNNNNNNGG	1 cut(s)	761
BsmAI	GTCTC	4 cut(s)	158, 418, 795, 1105
BsmBI	CGTCTC	1 cut(s)	158
BsmFI	GGGAC	3 cut(s)	224, 338, 933
BsnI	GGCC	4 cut(s)	62, 277, 678, 1174
BsoBI	CYCGRG	2 cut(s)	741, 962
Bsp1286I	GDGCHC	1 cut(s)	169
Bsp1407I	TGTACA	2 cut(s)	261, 628
Bsp143I	GATC	7 cut(s)	100, 120, 124, 598, 721, 841, 958
Bsp19I	CCATGG	1 cut(s)	47
Bsp68I	TCGCGA	1 cut(s)	189
BspACI	CCGC	4 cut(s)	72, 148, 170, 635
BspANI	GGCC	4 cut(s)	62, 277, 678, 1174
BspCNI	CTCAG	1 cut(s)	296
BspDI	ATCGAT	1 cut(s)	123
BspFNI	CGCG	1 cut(s)	189
BspLI	GGNNCC	5 cut(s)	354, 517, 639, 723, 1175
BspMI	ACCTGC	1 cut(s)	1037
BspPI	GGATC	4 cut(s)	128, 716, 729, 836
BspQI	GCTCTTC	1 cut(s)	21
BspT107I	GGYRCC	2 cut(s)	515, 637
BsrDI	GCAATG	1 cut(s)	453
BsrFI	RCCGGY	1 cut(s)	590
BsrGI	TGTACA	2 cut(s)	261, 628
BssAI	RCCGGY	1 cut(s)	590
BssECI	CCNNGG	2 cut(s)	47, 811
BssMI	GATC	7 cut(s)	100, 120, 124, 598, 721, 841, 958
BssNI	GRCGYC	1 cut(s)	192
BssT1I	CCWWGG	1 cut(s)	47
Bst2UI	CCWGG	2 cut(s)	719, 812
Bst4CI	ACNGT	1 cut(s)	409
Bst6I	CTCTTC	3 cut(s)	21, 265, 674
BstACI	GRCGYC	1 cut(s)	192
BstAUI	TGTACA	2 cut(s)	261, 628
BstBAI	YACGTR	2 cut(s)	164, 862
BstC8I	GCNNGC	2 cut(s)	777, 1020
BstDEI	CTNAG	1 cut(s)	283
BstDSI	CCRYGG	1 cut(s)	47
BstF5I	GGATG	3 cut(s)	235, 309, 1009
BstFNI	CGCG	1 cut(s)	189
BstKTI	GATC	7 cut(s)	103, 123, 127, 601, 724, 844, 961
BstMAI	GTCTC	4 cut(s)	158, 418, 795, 1105
BstMBI	GATC	7 cut(s)	100, 120, 124, 598, 721, 841, 958
BstMWI	GCNNNNNNNGC	3 cut(s)	301, 1130, 1163
BstNI	CCWGG	2 cut(s)	719, 812
BstNSI	RCATGY	1 cut(s)	1189
BstSCI	CCNGG	3 cut(s)	207, 717, 810
BstSNI	TACGTA	1 cut(s)	862
BstUI	CGCG	1 cut(s)	189
BstV1I	GCAGC	2 cut(s)	43, 1117
BstV2I	GAAGAC	1 cut(s)	187
BstX2I	RGATCY	2 cut(s)	721, 958
BstYI	RGATCY	2 cut(s)	721, 958
Bsu15I	ATCGAT	1 cut(s)	123
BsuRI	GGCC	4 cut(s)	62, 277, 678, 1174
BsuTUI	ATCGAT	1 cut(s)	123
BtgI	CCRYGG	1 cut(s)	47
BtsCI	GGATG	3 cut(s)	235, 309, 1009
BtsI	GCAGTG	1 cut(s)	1173
BtsIMutI	CAGTG	2 cut(s)	1137, 1173
BtuMI	TCGCGA	1 cut(s)	189
BveI	ACCTGC	1 cut(s)	1037
Cac8I	GCNNGC	2 cut(s)	777, 1020
Cfr10I	RCCGGY	1 cut(s)	590
Cfr13I	GGNCC	3 cut(s)	275, 352, 1173
ClaI	ATCGAT	1 cut(s)	123
CseI	GACGC	1 cut(s)	1163
Csp6I	GTAC	3 cut(s)	262, 629, 638
CspAI	ACCGGT	1 cut(s)	590
CviAII	CATG	4 cut(s)	48, 319, 532, 1186
CviQI	GTAC	3 cut(s)	262, 629, 638
DdeI	CTNAG	1 cut(s)	283
DpnI	GATC	7 cut(s)	102, 122, 126, 600, 723, 843, 960
DpnII	GATC	7 cut(s)	100, 120, 124, 598, 721, 841, 958
EaeI	YGGCCR	1 cut(s)	676
Eam1104I	CTCTTC	3 cut(s)	21, 265, 674
EarI	CTCTTC	3 cut(s)	21, 265, 674
EciI	GGCGGA	1 cut(s)	137
Eco105I	TACGTA	1 cut(s)	862
Eco130I	CCWWGG	1 cut(s)	47
Eco32I	GATATC	1 cut(s)	767
Eco47I	GGWCC	1 cut(s)	352
Eco72I	CACGTG	1 cut(s)	164
Eco88I	CYCGRG	2 cut(s)	741, 962
EcoO109I	RGGNCCY	3 cut(s)	275, 352, 1173
EcoRI	GAATTC	1 cut(s)	847
EcoRII	CCWGG	2 cut(s)	717, 810
EcoRV	GATATC	1 cut(s)	767
EcoT14I	CCWWGG	1 cut(s)	47
ErhI	CCWWGG	1 cut(s)	47
Esp3I	CGTCTC	1 cut(s)	158
FaeI	CATG	4 cut(s)	51, 322, 535, 1189
FalI	AAGNNNNNCTT	4 cut(s)	262, 294, 672, 704
FaqI	GGGAC	3 cut(s)	224, 338, 933
FatI	CATG	4 cut(s)	47, 318, 531, 1185
FblI	GTMKAC	1 cut(s)	969
Fnu4HI	GCNGC	3 cut(s)	32, 73, 1131
FokI	GGATG	3 cut(s)	242, 296, 1016
Fsp4HI	GCNGC	3 cut(s)	32, 73, 1131
FspBI	CTAG	2 cut(s)	837, 1125
GluI	GCNGC	3 cut(s)	32, 73, 1131
GsuI	CTGGAG	1 cut(s)	794
HaeIII	GGCC	4 cut(s)	62, 277, 678, 1174
HapII	CCGG	2 cut(s)	208, 591
HgaI	GACGC	1 cut(s)	1163
Hin1I	GRCGYC	1 cut(s)	192
Hin1II	CATG	4 cut(s)	51, 322, 535, 1189
HincII	GTYRAC	1 cut(s)	1059
HindII	GTYRAC	1 cut(s)	1059
HinfI	GANTC	4 cut(s)	43, 223, 788, 869
HpaII	CCGG	2 cut(s)	208, 591
HphI	GGTGA	7 cut(s)	148, 197, 316, 547, 547, 580, 605
Hpy166II	GTNNAC	5 cut(s)	264, 324, 970, 1059, 1153
Hpy188I	TCNGA	5 cut(s)	286, 496, 545, 846, 990
Hpy188III	TCNNGA	4 cut(s)	188, 227, 962, 1001
Hpy8I	GTNNAC	5 cut(s)	264, 324, 970, 1059, 1153
Hpy99I	CGWCG	3 cut(s)	140, 189, 194
HpyAV	CCTTC	6 cut(s)	46, 62, 288, 325, 529, 532
HpyCH4III	ACNGT	1 cut(s)	409
HpyCH4IV	ACGT	4 cut(s)	163, 174, 192, 861
HpyCH4V	TGCA	6 cut(s)	295, 337, 431, 875, 908, 1046
HpyF10VI	GCNNNNNNNGC	3 cut(s)	301, 1130, 1163
HpyF3I	CTNAG	1 cut(s)	283
HpySE526I	ACGT	4 cut(s)	163, 174, 192, 861
Hsp92I	GRCGYC	1 cut(s)	192
Hsp92II	CATG	4 cut(s)	51, 322, 535, 1189
KpnI	GGTACC	1 cut(s)	641
Kzo9I	GATC	7 cut(s)	100, 120, 124, 598, 721, 841, 958
LguI	GCTCTTC	1 cut(s)	21
LmnI	GCTCC	3 cut(s)	172, 757, 953
Lsp1109I	GCAGC	2 cut(s)	43, 1117
LweI	GCATC	3 cut(s)	220, 313, 331
MaeI	CTAG	2 cut(s)	837, 1125
MaeII	ACGT	4 cut(s)	163, 174, 192, 861
MaeIII	GTNAC	3 cut(s)	553, 862, 1135
MalI	GATC	7 cut(s)	102, 122, 126, 600, 723, 843, 960
MboI	GATC	7 cut(s)	100, 120, 124, 598, 721, 841, 958
MflI	RGATCY	2 cut(s)	721, 958
MhlI	GDGCHC	1 cut(s)	169
MlsI	TGGCCA	1 cut(s)	678
MluCI	AATT	4 cut(s)	783, 847, 992, 1101
MluNI	TGGCCA	1 cut(s)	678
MlyI	GAGTC	1 cut(s)	797
MmeI	TCCRAC	1 cut(s)	523
Mox20I	TGGCCA	1 cut(s)	678
MscI	TGGCCA	1 cut(s)	678
MseI	TTAA	4 cut(s)	348, 698, 782, 885
Msp20I	TGGCCA	1 cut(s)	678
MspI	CCGG	2 cut(s)	208, 591
MspR9I	CCNGG	3 cut(s)	209, 719, 812
MvaI	CCWGG	2 cut(s)	719, 812
MvnI	CGCG	1 cut(s)	189
MwoI	GCNNNNNNNGC	3 cut(s)	301, 1130, 1163
NciI	CCSGG	1 cut(s)	209
NcoI	CCATGG	1 cut(s)	47
NdeII	GATC	7 cut(s)	100, 120, 124, 598, 721, 841, 958
NlaIII	CATG	4 cut(s)	51, 322, 535, 1189
NlaIV	GGNNCC	5 cut(s)	354, 517, 639, 723, 1175
NmuCI	GTSAC	2 cut(s)	553, 1135
NruI	TCGCGA	1 cut(s)	189
NspI	RCATGY	1 cut(s)	1189
PaeR7I	CTCGAG	1 cut(s)	962
PciI	ACATGT	1 cut(s)	1185
PciSI	GCTCTTC	1 cut(s)	21
PfeI	GAWTC	3 cut(s)	43, 223, 869
PflMI	CCANNNNNTGG	1 cut(s)	761
PinAI	ACCGGT	1 cut(s)	590
PkrI	GCNGC	3 cut(s)	33, 74, 1132
PleI	GAGTC	1 cut(s)	796
PmaCI	CACGTG	1 cut(s)	164
PmlI	CACGTG	1 cut(s)	164
PpsI	GAGTC	1 cut(s)	796
Ppu21I	YACGTR	2 cut(s)	164, 862
PpuMI	RGGWCCY	1 cut(s)	352
PscI	ACATGT	1 cut(s)	1185
Psp5II	RGGWCCY	1 cut(s)	352
Psp6I	CCWGG	2 cut(s)	717, 810
PspCI	CACGTG	1 cut(s)	164
PspGI	CCWGG	2 cut(s)	717, 810
PspN4I	GGNNCC	5 cut(s)	354, 517, 639, 723, 1175
PspPI	GGNCC	3 cut(s)	275, 352, 1173
PspPPI	RGGWCCY	1 cut(s)	352
PsuI	RGATCY	2 cut(s)	721, 958
RruI	TCGCGA	1 cut(s)	189
RsaI	GTAC	3 cut(s)	263, 630, 639
RsaNI	GTAC	3 cut(s)	262, 629, 638
SapI	GCTCTTC	1 cut(s)	21
SaqAI	TTAA	4 cut(s)	348, 698, 782, 885
SatI	GCNGC	3 cut(s)	32, 73, 1131
Sau3AI	GATC	7 cut(s)	100, 120, 124, 598, 721, 841, 958
Sau96I	GGNCC	3 cut(s)	275, 352, 1173
SchI	GAGTC	1 cut(s)	797
ScrFI	CCNGG	3 cut(s)	209, 719, 812
SduI	GDGCHC	1 cut(s)	169
SfaNI	GCATC	3 cut(s)	220, 313, 331
Sfr274I	CTCGAG	1 cut(s)	962
SgrAI	CRCCGGYG	1 cut(s)	590
SinI	GGWCC	1 cut(s)	352
SlaI	CTCGAG	1 cut(s)	962
SmlI	CTYRAG	1 cut(s)	962
SmoI	CTYRAG	1 cut(s)	962
SnaBI	TACGTA	1 cut(s)	862
Sse9I	AATT	4 cut(s)	783, 847, 992, 1101
SsiI	CCGC	4 cut(s)	72, 148, 170, 635
SspI	AATATT	1 cut(s)	332
SspMI	CTAG	2 cut(s)	837, 1125
StyD4I	CCNGG	3 cut(s)	207, 717, 810
StyI	CCWWGG	1 cut(s)	47
TaaI	ACNGT	1 cut(s)	409
TaiI	ACGT	4 cut(s)	166, 177, 195, 864
TaqI	TCGA	6 cut(s)	81, 123, 138, 963, 1051, 1191
TasI	AATT	4 cut(s)	783, 847, 992, 1101
TatI	WGTACW	2 cut(s)	261, 628
TauI	GCSGC	1 cut(s)	75
TfiI	GAWTC	3 cut(s)	43, 223, 869
Tru1I	TTAA	4 cut(s)	348, 698, 782, 885
Tru9I	TTAA	4 cut(s)	348, 698, 782, 885
TscAI	CASTG	2 cut(s)	1144, 1173
TseFI	GTSAC	2 cut(s)	553, 1135
TseI	GCWGC	2 cut(s)	31, 1130
Tsp45I	GTSAC	2 cut(s)	553, 1135
TspDTI	ATGAA	3 cut(s)	307, 645, 1085
TspGWI	ACGGA	1 cut(s)	173
TspRI	CASTG	2 cut(s)	1144, 1173
Van91I	CCANNNNNTGG	1 cut(s)	761
VpaK11BI	GGWCC	1 cut(s)	352
XapI	RAATTY	2 cut(s)	847, 992
XceI	RCATGY	1 cut(s)	1189
XhoI	CTCGAG	1 cut(s)	962
XmiI	GTMKAC	1 cut(s)	969
XspI	CTAG	2 cut(s)	837, 1125
ZraI	GACGTC	1 cut(s)	193

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.