Rh7AG319000

Belongs to the class-I aminoacyl-tRNA synthetase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Forward (+)
36047045 .. 36050883
3839 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG319000.1

Sequence Viewer

Length: 393 bp
ATGGAAGTTGGTATAGAAGTAGCAGCTACTATTGAAGTGGCAGCTGTTATAGAGCATGTTCATGCCGCTCCTACAGAGGTTCGTGTTGCTCCTATTAAGTTGGTTGAAGTTACACAGGAGGATATTGCGAGAAAGATAAACAAGTTTGCATTTTCAGGGGGACGAGATTCAATAGAGGAACACAGACAGAAGGGAGCAAGGCTGGACGTAGACATACCATACAAATACGAATACCTTCAGTTTTTCCTAGAGGATGACAGTGAACTCAATTACATAAAGGAGGCGTATGGTGCGGGACGCATGTTAACAGGTCAAGTAAAACAGCGGTTTATTGAAGTTTTGACTGAAATAGTAGAAAGACATCGTCGAGCTAGGGCTGCTGACCTGCTGTGA

Protein Analysis

130

Amino Acids

14.81

Weight (kDa)

5.41

Isoelectric Point (pI)

45.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 68
AccI GTMKAC 1 cut(s) 210
AciI CCGC 3 cut(s) 66, 293, 325
AcuI CTGAAG 1 cut(s) 221
AgsI TTSAA 4 cut(s) 35, 107, 171, 335
AluBI AGCT 3 cut(s) 26, 44, 371
AluI AGCT 3 cut(s) 26, 44, 371
ApeKI GCWGC 3 cut(s) 23, 41, 377
Asp700I GAANNNNTTC 1 cut(s) 234
BbvI GCAGC 3 cut(s) 35, 53, 364
BfaI CTAG 2 cut(s) 248, 372
BfmI CTRYAG 1 cut(s) 72
BisI GCNGC 4 cut(s) 24, 42, 66, 378
BlsI GCNGC 4 cut(s) 25, 43, 67, 379
BseGI GGATG 1 cut(s) 259
BseXI GCAGC 3 cut(s) 35, 53, 364
BslFI GGGAC 2 cut(s) 174, 309
BsmFI GGGAC 2 cut(s) 174, 309
BspACI CCGC 3 cut(s) 66, 293, 325
BsrBI CCGCTC 1 cut(s) 68
Bst4CI ACNGT 1 cut(s) 260
BstF5I GGATG 1 cut(s) 259
BstMWI GCNNNNNNNGC 2 cut(s) 290, 377
BstNSI RCATGY 2 cut(s) 59, 304
BstSFI CTRYAG 1 cut(s) 72
BstV1I GCAGC 3 cut(s) 35, 53, 364
BtsCI GGATG 1 cut(s) 259
BtsIMutI CAGTG 1 cut(s) 265
CseI GACGC 1 cut(s) 306
CviAII CATG 3 cut(s) 56, 62, 301
CviJI RGCY 5 cut(s) 26, 44, 202, 371, 377
CviKI_1 RGCY 5 cut(s) 26, 44, 202, 371, 377
Eco57I CTGAAG 1 cut(s) 221
FaeI CATG 3 cut(s) 59, 65, 304
FaiI YATR 9 cut(s) 14, 50, 57, 63, 215, 220, 275, 288, 302
FaqI GGGAC 2 cut(s) 174, 309
FatI CATG 3 cut(s) 55, 61, 300
FauI CCCGC 1 cut(s) 286
FblI GTMKAC 1 cut(s) 210
Fnu4HI GCNGC 4 cut(s) 24, 42, 66, 378
FokI GGATG 1 cut(s) 266
Fsp4HI GCNGC 4 cut(s) 24, 42, 66, 378
FspBI CTAG 2 cut(s) 248, 372
GluI GCNGC 4 cut(s) 24, 42, 66, 378
HgaI GACGC 1 cut(s) 306
Hin1II CATG 3 cut(s) 59, 65, 304
HincII GTYRAC 1 cut(s) 306
HindII GTYRAC 1 cut(s) 306
HinfI GANTC 1 cut(s) 167
HpaI GTTAAC 1 cut(s) 306
Hpy166II GTNNAC 3 cut(s) 211, 263, 306
Hpy8I GTNNAC 3 cut(s) 211, 263, 306
Hpy99I CGWCG 1 cut(s) 369
HpyAV CCTTC 2 cut(s) 184, 245
HpyCH4III ACNGT 1 cut(s) 260
HpyCH4IV ACGT 1 cut(s) 207
HpyCH4V TGCA 1 cut(s) 149
HpyF10VI GCNNNNNNNGC 2 cut(s) 290, 377
HpySE526I ACGT 1 cut(s) 207
Hsp92II CATG 3 cut(s) 59, 65, 304
KspAI GTTAAC 1 cut(s) 306
LmnI GCTCC 3 cut(s) 73, 94, 194
LpnPI CCDG 4 cut(s) 101, 141, 188, 294
Lsp1109I GCAGC 3 cut(s) 35, 53, 364
MaeI CTAG 2 cut(s) 248, 372
MaeII ACGT 1 cut(s) 207
MaeIII GTNAC 1 cut(s) 109
MbiI CCGCTC 1 cut(s) 68
MluCI AATT 1 cut(s) 268
MnlI CCTC 5 cut(s) 70, 112, 169, 244, 274
MroXI GAANNNNTTC 1 cut(s) 234
MseI TTAA 2 cut(s) 96, 305
MslI CAYNNNNRTG 1 cut(s) 60
MspA1I CMGCKG 2 cut(s) 44, 325
MwoI GCNNNNNNNGC 2 cut(s) 290, 377
NlaIII CATG 3 cut(s) 59, 65, 304
NspI RCATGY 2 cut(s) 59, 304
PdmI GAANNNNTTC 1 cut(s) 234
PfeI GAWTC 1 cut(s) 167
PflFI GACNNNGTC 1 cut(s) 363
PkrI GCNGC 4 cut(s) 25, 43, 67, 379
PsyI GACNNNGTC 1 cut(s) 363
PvuII CAGCTG 1 cut(s) 44
RseI CAYNNNNRTG 1 cut(s) 60
SaqAI TTAA 2 cut(s) 96, 305
SatI GCNGC 4 cut(s) 24, 42, 66, 378
SetI ASST 8 cut(s) 28, 46, 81, 210, 237, 313, 373, 387
SfcI CTRYAG 1 cut(s) 72
SmiMI CAYNNNNRTG 1 cut(s) 60
Sse9I AATT 1 cut(s) 268
SsiI CCGC 3 cut(s) 66, 293, 325
SspMI CTAG 2 cut(s) 248, 372
TaaI ACNGT 1 cut(s) 260
TaiI ACGT 1 cut(s) 210
TaqI TCGA 1 cut(s) 367
TasI AATT 1 cut(s) 268
TauI GCSGC 1 cut(s) 68
TfiI GAWTC 1 cut(s) 167
Tru1I TTAA 2 cut(s) 96, 305
Tru9I TTAA 2 cut(s) 96, 305
TscAI CASTG 1 cut(s) 265
TseI GCWGC 3 cut(s) 23, 41, 377
TspDTI ATGAA 1 cut(s) 50
TspRI CASTG 1 cut(s) 265
Tth111I GACNNNGTC 1 cut(s) 363
XceI RCATGY 2 cut(s) 59, 304
XmiI GTMKAC 1 cut(s) 210
XmnI GAANNNNTTC 1 cut(s) 234
XspI CTAG 2 cut(s) 248, 372
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.