Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0002063

Physical Location & Seq

Genomic Coordinates Forward (+)

14126507 .. 14127371

Gene Structure 865 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G116100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 477 bp

ATGAGCTCACAAAACTGTTCAGGGCAAACTTCAGGACTGGTTCAATTTCCACAACCCACAAGACCAATAAACAGCTACAAGGACATGACGAGTTCAATGGCACTGCCTCAACCCACAAAGCCAATTAGCCTAGACAATATCACTTGTACGAATTCCGAGCCATACTTGCCCAAAACAGAAGCCAAACTTCCACAACAATTTGTTGATCGTGTAAATCTGGCACCGCCAACCGAAGAGGAACACAAGGAATCTCTTCATGGGTTGCTTGAAATCATCTCAGAGCTTCGTGAAAAAGTTCCTGCAAAATTAGCAGACCACTTACGTGATATGGATGGAACAAAAGCTCTACCCACTGTGCTAAAGGGTTCTACTGCTAGCCGTGGCCTTGAAGCTGTGGATTTGTCAAAGAAGCTTGAGCGCTTCAAGATACGAACTTTCGATTCAGAAGGAGTTGTGGAGGAGGAACAGAAGCGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

159

Amino Acids

17.59

Weight (kDa)

5.96

Isoelectric Point (pI)

58.14

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002063)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36430
fragaria_vesca	FvH4_6g18050 FvH4_6g18060 FvH4_6g18063
malus_domestica	MD12G1019200.v1.1 MD14G1017100.v1.1
prunus_persica	Prupe.7G116000_v2.0.a1 Prupe.7G116100_v2.0.a1 Prupe.7G116200_v2.0.a1
pyrus_communis	pycom12g01590 pycom12g01610 pycom14g01490
rosa_chinensis	RchiOBHm_Chr3g0472321 RchiOBHm_Chr3g0472331 RchiOBHm_Chr3g0472341
rosa_laevigata	RLG00000024087 RLG00000024112
rosa_multiflora	Rmu_co8308659.1_g000001 Rmu_co8344587.1_g000001 Rmu_co8459455.1_g000001 Rmu_sc0000090.1_g000030 Rmu_sc0000627.1_g000002 Rmu_sc0002532.1_g000004 Rmu_sc0026961.1_g000001
rosa_roxburghii	Rroxscaffold_6G00409010 Rroxscaffold_6G00409020 Rroxscaffold_6G00409030 Rroxscaffold_6G00409070 Rroxscaffold_6G00409360
rosa_rugosa	Rorug03G0123900 Rorug03G0124000 Rorug03G0124100 Rorug03G0124200
rosa_samantha	Rh3AG176300 Rh3AG176500 Rh3BG202000 Rh3BG202100 Rh3BG202200 Rh3DG173000 Rh3DG173200 Rh3DG173300
rosa_wichuraiana	Rw3G016490 Rw3G016500 Rw3G016740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	220
AciI	CCGC	1 cut(s)	224
AcsI	RAATTY	1 cut(s)	151
AcuI	CTGAAG	1 cut(s)	15
AfaI	GTAC	1 cut(s)	148
AfeI	AGCGCT	1 cut(s)	419
AgsI	TTSAA	5 cut(s)	44, 96, 269, 389, 424
AleI	CACNNNNGTG	1 cut(s)	321
AluBI	AGCT	6 cut(s)	6, 75, 283, 344, 392, 412
AluI	AGCT	6 cut(s)	6, 75, 283, 344, 392, 412
Alw21I	GWGCWC	1 cut(s)	8
Aor51HI	AGCGCT	1 cut(s)	419
AoxI	GGCC	1 cut(s)	382
ApoI	RAATTY	1 cut(s)	151
Asp700I	GAANNNNTTC	2 cut(s)	252, 294
AspLEI	GCGC	1 cut(s)	420
AsuNHI	GCTAGC	1 cut(s)	374
BanI	GGYRCC	1 cut(s)	220
BanII	GRGCYC	1 cut(s)	8
Bbv12I	GWGCWC	1 cut(s)	8
BccI	CCATC	1 cut(s)	326
BceAI	ACGGC	1 cut(s)	363
BfaI	CTAG	2 cut(s)	131, 375
BfoI	RGCGCY	1 cut(s)	421
BmiI	GGNNCC	1 cut(s)	222
BmtI	GCTAGC	1 cut(s)	378
BpuEI	CTTGAG	1 cut(s)	434
BsaAI	YACGTR	1 cut(s)	323
BsaJI	CCNNGG	1 cut(s)	379
Bse1I	ACTGG	1 cut(s)	42
BseDI	CCNNGG	1 cut(s)	379
BseGI	GGATG	1 cut(s)	337
BseMII	CTCAG	1 cut(s)	291
BseNI	ACTGG	1 cut(s)	42
BseRI	GAGGAG	1 cut(s)	473
BshFI	GGCC	1 cut(s)	384
BshNI	GGYRCC	1 cut(s)	220
BsiHKAI	GWGCWC	1 cut(s)	8
BsnI	GGCC	1 cut(s)	384
Bsp1286I	GDGCHC	1 cut(s)	8
Bsp143I	GATC	1 cut(s)	205
BspACI	CCGC	1 cut(s)	224
BspANI	GGCC	1 cut(s)	384
BspCNI	CTCAG	1 cut(s)	290
BspLI	GGNNCC	1 cut(s)	222
BspOI	GCTAGC	1 cut(s)	378
BspT107I	GGYRCC	1 cut(s)	220
BsrI	ACTGG	1 cut(s)	42
BssECI	CCNNGG	1 cut(s)	379
BssMI	GATC	1 cut(s)	205
Bst4CI	ACNGT	2 cut(s)	17, 355
Bst6I	CTCTTC	2 cut(s)	228, 258
BstBAI	YACGTR	1 cut(s)	323
BstC8I	GCNNGC	1 cut(s)	376
BstDEI	CTNAG	1 cut(s)	277
BstDSI	CCRYGG	1 cut(s)	379
BstF5I	GGATG	1 cut(s)	337
BstH2I	RGCGCY	1 cut(s)	421
BstHHI	GCGC	1 cut(s)	420
BstKTI	GATC	1 cut(s)	208
BstMBI	GATC	1 cut(s)	205
BstMWI	GCNNNNNNNGC	2 cut(s)	166, 308
BsuRI	GGCC	1 cut(s)	384
BtgI	CCRYGG	1 cut(s)	379
BtsCI	GGATG	1 cut(s)	337
BtsI	GCAGTG	1 cut(s)	101
BtsIMutI	CAGTG	2 cut(s)	101, 351
Cac8I	GCNNGC	1 cut(s)	376
CfoI	GCGC	1 cut(s)	420
Csp6I	GTAC	1 cut(s)	147
CviAII	CATG	2 cut(s)	85, 257
CviQI	GTAC	1 cut(s)	147
DdeI	CTNAG	1 cut(s)	277
DpnI	GATC	1 cut(s)	207
DpnII	GATC	1 cut(s)	205
Eam1104I	CTCTTC	2 cut(s)	228, 258
EarI	CTCTTC	2 cut(s)	228, 258
Ecl136II	GAGCTC	1 cut(s)	6
Eco24I	GRGCYC	1 cut(s)	8
Eco47III	AGCGCT	1 cut(s)	419
Eco53kI	GAGCTC	1 cut(s)	6
Eco57I	CTGAAG	1 cut(s)	15
EcoICRI	GAGCTC	1 cut(s)	6
EcoRI	GAATTC	1 cut(s)	151
EcoT38I	GRGCYC	1 cut(s)	8
FaeI	CATG	2 cut(s)	88, 260
FaiI	YATR	4 cut(s)	86, 163, 258, 329
FalI	AAGNNNNNCTT	2 cut(s)	171, 203
FatI	CATG	2 cut(s)	84, 256
FokI	GGATG	1 cut(s)	344
FriOI	GRGCYC	1 cut(s)	8
FspBI	CTAG	2 cut(s)	131, 375
GlaI	GCGC	1 cut(s)	419
HaeII	RGCGCY	1 cut(s)	421
HaeIII	GGCC	1 cut(s)	384
HhaI	GCGC	1 cut(s)	420
Hin1II	CATG	2 cut(s)	88, 260
Hin6I	GCGC	1 cut(s)	418
HinP1I	GCGC	1 cut(s)	418
HindIII	AAGCTT	1 cut(s)	410
HinfI	GANTC	2 cut(s)	248, 440
Hpy188I	TCNGA	3 cut(s)	157, 280, 445
Hpy188III	TCNNGA	3 cut(s)	33, 287, 424
HpyAV	CCTTC	1 cut(s)	440
HpyCH4III	ACNGT	2 cut(s)	17, 355
HpyCH4IV	ACGT	1 cut(s)	322
HpyCH4V	TGCA	1 cut(s)	302
HpyF10VI	GCNNNNNNNGC	2 cut(s)	166, 308
HpyF3I	CTNAG	1 cut(s)	277
HpySE526I	ACGT	1 cut(s)	322
Hsp92II	CATG	2 cut(s)	88, 260
HspAI	GCGC	1 cut(s)	418
Kzo9I	GATC	1 cut(s)	205
LpnPI	CCDG	5 cut(s)	6, 18, 23, 203, 312
MaeI	CTAG	2 cut(s)	131, 375
MaeII	ACGT	1 cut(s)	322
MalI	GATC	1 cut(s)	207
MboI	GATC	1 cut(s)	205
MboII	GAAGA	2 cut(s)	245, 245
MhlI	GDGCHC	1 cut(s)	8
MluCI	AATT	5 cut(s)	44, 123, 151, 197, 305
MnlI	CCTC	4 cut(s)	117, 229, 451, 454
MroXI	GAANNNNTTC	2 cut(s)	252, 294
MslI	CAYNNNNRTG	1 cut(s)	321
MwoI	GCNNNNNNNGC	2 cut(s)	166, 308
NdeII	GATC	1 cut(s)	205
NheI	GCTAGC	1 cut(s)	374
NlaIII	CATG	2 cut(s)	88, 260
NlaIV	GGNNCC	1 cut(s)	222
OliI	CACNNNNGTG	1 cut(s)	321
PdmI	GAANNNNTTC	2 cut(s)	252, 294
PfeI	GAWTC	2 cut(s)	248, 440
Ppu21I	YACGTR	1 cut(s)	323
Psp124BI	GAGCTC	1 cut(s)	8
PspN4I	GGNNCC	1 cut(s)	222
RsaI	GTAC	1 cut(s)	148
RsaNI	GTAC	1 cut(s)	147
RseI	CAYNNNNRTG	1 cut(s)	321
SacI	GAGCTC	1 cut(s)	8
Sau3AI	GATC	1 cut(s)	205
SduI	GDGCHC	1 cut(s)	8
SetI	ASST	7 cut(s)	8, 77, 285, 325, 346, 394, 414
SmiMI	CAYNNNNRTG	1 cut(s)	321
SmlI	CTYRAG	1 cut(s)	413
SmoI	CTYRAG	1 cut(s)	413
Sse9I	AATT	5 cut(s)	44, 123, 151, 197, 305
SsiI	CCGC	1 cut(s)	224
SspMI	CTAG	2 cut(s)	131, 375
SstI	GAGCTC	1 cut(s)	8
TaaI	ACNGT	2 cut(s)	17, 355
TaiI	ACGT	1 cut(s)	325
TaqI	TCGA	1 cut(s)	438
TasI	AATT	5 cut(s)	44, 123, 151, 197, 305
TfiI	GAWTC	2 cut(s)	248, 440
TscAI	CASTG	2 cut(s)	108, 358
TspDTI	ATGAA	1 cut(s)	245
TspRI	CASTG	2 cut(s)	108, 358
XapI	RAATTY	1 cut(s)	151
XmnI	GAANNNNTTC	2 cut(s)	252, 294
XspI	CTAG	2 cut(s)	131, 375

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.