Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0002063

Physical Location & Seq

Genomic Coordinates Forward (+)

10032147 .. 10037693

Gene Structure 5547 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0124200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1356 bp

ATGAGGAAAGTCGAACGCTATTCCGTTCAGAGAGTTACCGGTGATGGACGCTGTCTATTTCGTGCACTGGTAAAAGGGATGGCAGCAAATAAAAGGTCACCTCTTAGCCCAAGGGAAGAGAGAGACAATGCAGATGAACTACGGATGGCTGTGAAAGAGGTTATATGCGAAAATGAGGAAGAGCGCCCCCAGTATGAAGCAGCTATAGTGGCAATTACTGTCGATGAATCCTTAAAACGTTACTGCCAGCGAATCCAAAGACCTGATTTCTGGGGAGGAGAGTCGGAGCTGCTGGTGCTCTCAAAATTGTGTAGACAGCCAATCATCGTCTATATTCCAGAGCATGAGCACACAAATGGTGGAAGGGGTCCTGGTTTCATTCCCATTGCAGAATATGGAAGCGAGTTTAGTAAAGGTTCGAGAAACAGAAAGCCGAGGAAGGCCGTGAGGCTCTTGTTCAGTGGCAGGAACCATTATGATCTGCTTGGTTCCTCCTACGTACGAGTCATTGAGTCAACGATTTTAGAACCCAGGCGGCCTCGGACCTCATTGCAAACTTCACAAGGAACTTGCTTCATCCAGGAGACGACGTCGTTCCTGCTGCACAACCCATTTGAGCTTTTCTGCTTCAGTAGTCACTCCGCCGCCGCCGTCCCTCGCCAGCTTTCTCTTATGGCGCCCAAGTTTTCAAACCAGGCTGTTCTTGAGCAGCTTAAGAATGGATTTGCTCAGTTTGAGCTCGTCTCCTACCCCCTTCTCTCTATTTCAACTTCCATTTCTCAGGCGAACTTTCCGGCATCTCTCGGAGACTATAGCCACCGGTTCTTTGCCGGAACTGGACTAGGCAGAGGATCTAAAGAGTTCAGGAAAGCCGAAATCTATACAGTTCACGAAGTTAAAAAAGATGGGCGATGTCTATTTCGTGCACTGGCAAAAGGAATATTGGCAGCAAATACTGGGTCTCTTCCCGATCTGACCAAAAGGGAAGAGCAAAAACGTGCAGGCGAACTACTGGAGGATGTGAATGATGTTATATGTGAGAATACGAAGCTCCCCAAGTATGAAGCAGCCCGGAAGGCAATTAATGCTGCACTCTTTAAAGGAGGTTTCCATAGTTACTGCGATCGTATCAGAGAACCCGATTTCTGGGGAGGAGAGTCGGAGCTACTGGTGCTGTCGCAGTTACTAAAGCAGCCGATCATTGTGTATAAACGAGCGGATGAGCACACAAATGGTGGAGGGGGTTCTGCTTTCATTCCCATTGAAGAATATGGAACCGAGTTTAAGCCCAAGAAGGCTGTGAGGCTCTTGTTAATTCACTTAAGTGACAGGAACCATTATGATCTGCTTGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF247

Protein Analysis

451

Amino Acids

50.88

Weight (kDa)

9.05

Isoelectric Point (pI)

36.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
OTU	PF02338	14 - 119	2.9e-11	OTU-like cysteine protease
OTU	PF02338	301 - 447	4.3e-11	OTU-like cysteine protease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002063)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36430
fragaria_vesca	FvH4_6g18050 FvH4_6g18060 FvH4_6g18063
malus_domestica	MD12G1019200.v1.1 MD14G1017100.v1.1
prunus_persica	Prupe.7G116000_v2.0.a1 Prupe.7G116100_v2.0.a1 Prupe.7G116200_v2.0.a1
pyrus_communis	pycom12g01590 pycom12g01610 pycom14g01490
rosa_chinensis	RchiOBHm_Chr3g0472321 RchiOBHm_Chr3g0472331 RchiOBHm_Chr3g0472341
rosa_laevigata	RLG00000024087 RLG00000024112
rosa_multiflora	Rmu_co8308659.1_g000001 Rmu_co8344587.1_g000001 Rmu_co8459455.1_g000001 Rmu_sc0000090.1_g000030 Rmu_sc0000627.1_g000002 Rmu_sc0002532.1_g000004 Rmu_sc0026961.1_g000001
rosa_roxburghii	Rroxscaffold_6G00409010 Rroxscaffold_6G00409020 Rroxscaffold_6G00409030 Rroxscaffold_6G00409070 Rroxscaffold_6G00409360
rosa_rugosa	Rorug03G0123900 Rorug03G0124000 Rorug03G0124100 Rorug03G0124200
rosa_samantha	Rh3AG176300 Rh3AG176500 Rh3BG202000 Rh3BG202100 Rh3BG202200 Rh3DG173000 Rh3DG173200 Rh3DG173300
rosa_wichuraiana	Rw3G016490 Rw3G016500 Rw3G016740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	593
AccB1I	GGYRCC	1 cut(s)	676
AccBSI	CCGCTC	1 cut(s)	1217
AccI	GTMKAC	1 cut(s)	313
AciI	CCGC	5 cut(s)	535, 642, 645, 648, 1217
AclI	AACGTT	1 cut(s)	238
AclWI	GGATC	1 cut(s)	859
AcuI	CTGAAG	1 cut(s)	613
AcyI	GRCGYC	2 cut(s)	590, 677
AfaI	GTAC	1 cut(s)	501
AfiI	CCNNNNNNNGG	1 cut(s)	1146
AflII	CTTAAG	2 cut(s)	713, 1321
AgeI	ACCGGT	2 cut(s)	38, 819
AgsI	TTSAA	3 cut(s)	690, 768, 1265
AjnI	CCWGG	4 cut(s)	370, 530, 579, 693
AleI	CACNNNNGTG	1 cut(s)	1323
AluBI	AGCT	8 cut(s)	203, 289, 619, 664, 712, 739, 1051, 1165
AluI	AGCT	8 cut(s)	203, 289, 619, 664, 712, 739, 1051, 1165
Alw21I	GWGCWC	6 cut(s)	67, 300, 351, 741, 928, 1227
Alw26I	GTCTC	5 cut(s)	117, 578, 748, 801, 966
Alw44I	GTGCAC	2 cut(s)	63, 924
AlwI	GGATC	1 cut(s)	859
AoxI	GGCC	2 cut(s)	441, 536
ApaLI	GTGCAC	2 cut(s)	63, 924
ApeKI	GCWGC	9 cut(s)	83, 200, 289, 601, 709, 947, 1067, 1088, 1192
ArsI	GACNNNNNNTTYG	4 cut(s)	80, 112, 944, 976
AseI	ATTAAT	1 cut(s)	1083
AsiGI	ACCGGT	2 cut(s)	38, 819
AspLEI	GCGC	2 cut(s)	186, 679
AspS9I	GGNCC	2 cut(s)	368, 543
AsuC2I	CCSGG	1 cut(s)	1072
AsuHPI	GGTGA	2 cut(s)	53, 90
AvaII	GGWCC	2 cut(s)	368, 543
BaeGI	GKGCMC	2 cut(s)	67, 928
BanI	GGYRCC	1 cut(s)	676
BanII	GRGCYC	1 cut(s)	741
Bbv12I	GWGCWC	6 cut(s)	67, 300, 351, 741, 928, 1227
BbvI	GCAGC	9 cut(s)	95, 212, 276, 588, 721, 959, 1075, 1079, 1204
BccI	CCATC	4 cut(s)	38, 73, 139, 899
BceAI	ACGGC	2 cut(s)	428, 635
BciT130I	CCWGG	4 cut(s)	372, 532, 581, 695
BcnI	CCSGG	1 cut(s)	1072
BcoDI	GTCTC	5 cut(s)	117, 578, 748, 801, 966
BfaI	CTAG	1 cut(s)	842
BfmI	CTRYAG	2 cut(s)	204, 811
BfoI	RGCGCY	2 cut(s)	187, 680
BfrI	CTTAAG	2 cut(s)	713, 1321
BglI	GCCNNNNNGGC	1 cut(s)	1076
Bme1390I	CCNGG	5 cut(s)	372, 532, 581, 695, 1072
Bme18I	GGWCC	2 cut(s)	368, 543
BmgT120I	GGNCC	2 cut(s)	368, 543
BmiI	GGNNCC	6 cut(s)	369, 470, 490, 678, 1276, 1334
BmrFI	CCNGG	5 cut(s)	372, 532, 581, 695, 1072
BmrI	ACTGGG	2 cut(s)	184, 966
BmsI	GCATC	1 cut(s)	806
BmuI	ACTGGG	2 cut(s)	184, 966
BplI	GAGNNNNNCTC	2 cut(s)	728, 760
BpmI	CTGGAG	1 cut(s)	1034
BpuEI	CTTGAG	1 cut(s)	725
BpuMI	CCSGG	1 cut(s)	1072
BsaAI	YACGTR	1 cut(s)	499
BsaHI	GRCGYC	2 cut(s)	590, 677
BsaI	GGTCTC	1 cut(s)	966
BsaJI	CCNNGG	4 cut(s)	110, 434, 530, 539
BsaWI	WCCGGW	2 cut(s)	38, 819
BsaXI	ACNNNNNCTCC	2 cut(s)	575, 605
Bsc4I	CCNNNNNNNGG	1 cut(s)	1146
Bse118I	RCCGGY	2 cut(s)	38, 819
Bse1I	ACTGG	7 cut(s)	72, 190, 841, 933, 961, 1017, 1173
Bse3DI	GCAATG	2 cut(s)	384, 548
BseBI	CCWGG	4 cut(s)	372, 532, 581, 695
BseDI	CCNNGG	4 cut(s)	110, 434, 530, 539
BseGI	GGATG	5 cut(s)	84, 150, 576, 1024, 1225
BseLI	CCNNNNNNNGG	1 cut(s)	1146
BseMI	GCAATG	2 cut(s)	384, 548
BseMII	CTCAG	2 cut(s)	743, 794
BseNI	ACTGG	7 cut(s)	72, 190, 841, 933, 961, 1017, 1173
BseRI	GAGGAG	2 cut(s)	291, 1167
BseSI	GKGCMC	2 cut(s)	67, 928
BseXI	GCAGC	9 cut(s)	95, 212, 276, 588, 721, 959, 1075, 1079, 1204
BsgI	GTGCAG	3 cut(s)	587, 1020, 1074
Bsh1285I	CGRYCG	1 cut(s)	1126
BshFI	GGCC	2 cut(s)	443, 538
BshNI	GGYRCC	1 cut(s)	676
BshTI	ACCGGT	2 cut(s)	38, 819
BsiEI	CGRYCG	1 cut(s)	1126
BsiHKAI	GWGCWC	6 cut(s)	67, 300, 351, 741, 928, 1227
BsiSI	CCGG	5 cut(s)	39, 794, 820, 831, 1072
BsiWI	CGTACG	1 cut(s)	499
BslFI	GGGAC	1 cut(s)	638
BslI	CCNNNNNNNGG	1 cut(s)	1146
BsmAI	GTCTC	5 cut(s)	117, 578, 748, 801, 966
BsmBI	CGTCTC	2 cut(s)	578, 748
BsmFI	GGGAC	1 cut(s)	638
BsnI	GGCC	2 cut(s)	443, 538
Bso31I	GGTCTC	1 cut(s)	966
Bsp1286I	GDGCHC	6 cut(s)	67, 300, 351, 741, 928, 1227
Bsp143I	GATC	6 cut(s)	478, 851, 970, 1123, 1197, 1342
BspACI	CCGC	5 cut(s)	535, 642, 645, 648, 1217
BspANI	GGCC	2 cut(s)	443, 538
BspCNI	CTCAG	2 cut(s)	742, 793
BspLI	GGNNCC	6 cut(s)	369, 470, 490, 678, 1276, 1334
BspPI	GGATC	1 cut(s)	859
BspQI	GCTCTTC	2 cut(s)	174, 981
BspT107I	GGYRCC	1 cut(s)	676
BspTI	CTTAAG	2 cut(s)	713, 1321
BspTNI	GGTCTC	1 cut(s)	966
BsrBI	CCGCTC	1 cut(s)	1217
BsrDI	GCAATG	2 cut(s)	384, 548
BsrFI	RCCGGY	2 cut(s)	38, 819
BsrI	ACTGG	7 cut(s)	72, 190, 841, 933, 961, 1017, 1173
BssAI	RCCGGY	2 cut(s)	38, 819
BssECI	CCNNGG	4 cut(s)	110, 434, 530, 539
BssMI	GATC	6 cut(s)	478, 851, 970, 1123, 1197, 1342
BssNI	GRCGYC	2 cut(s)	590, 677
BssT1I	CCWWGG	1 cut(s)	110
Bst2UI	CCWGG	4 cut(s)	372, 532, 581, 695
Bst4CI	ACNGT	2 cut(s)	220, 886
Bst6I	CTCTTC	4 cut(s)	111, 174, 969, 981
BstACI	GRCGYC	2 cut(s)	590, 677
BstAFI	CTTAAG	2 cut(s)	713, 1321
BstAPI	GCANNNNNTGC	1 cut(s)	1085
BstBAI	YACGTR	1 cut(s)	499
BstC8I	GCNNGC	3 cut(s)	248, 662, 1003
BstDEI	CTNAG	3 cut(s)	104, 729, 780
BstEII	GGTNACC	1 cut(s)	96
BstF5I	GGATG	5 cut(s)	84, 150, 576, 1024, 1225
BstH2I	RGCGCY	2 cut(s)	187, 680
BstHHI	GCGC	2 cut(s)	186, 679
BstKTI	GATC	6 cut(s)	481, 854, 973, 1126, 1200, 1345
BstMAI	GTCTC	5 cut(s)	117, 578, 748, 801, 966
BstMBI	GATC	6 cut(s)	478, 851, 970, 1123, 1197, 1342
BstMCI	CGRYCG	1 cut(s)	1126
BstMWI	GCNNNNNNNGC	5 cut(s)	209, 295, 1076, 1085, 1171
BstNI	CCWGG	4 cut(s)	372, 532, 581, 695
BstPI	GGTNACC	1 cut(s)	96
BstSCI	CCNGG	5 cut(s)	370, 530, 579, 693, 1070
BstSFI	CTRYAG	2 cut(s)	204, 811
BstSLI	GKGCMC	2 cut(s)	67, 928
BstSNI	TACGTA	1 cut(s)	499
BstV1I	GCAGC	9 cut(s)	95, 212, 276, 588, 721, 959, 1075, 1079, 1204
BstX2I	RGATCY	1 cut(s)	851
BstYI	RGATCY	1 cut(s)	851
BsuRI	GGCC	2 cut(s)	443, 538
BtgZI	GCGATG	1 cut(s)	925
BtsCI	GGATG	5 cut(s)	84, 150, 576, 1024, 1225
BtsIMutI	CAGTG	3 cut(s)	65, 466, 926
Cac8I	GCNNGC	3 cut(s)	248, 662, 1003
CfoI	GCGC	2 cut(s)	186, 679
Cfr10I	RCCGGY	2 cut(s)	38, 819
Cfr13I	GGNCC	2 cut(s)	368, 543
CseI	GACGC	1 cut(s)	57
Csp6I	GTAC	1 cut(s)	500
CspAI	ACCGGT	2 cut(s)	38, 819
CviAII	CATG	1 cut(s)	344
CviQI	GTAC	1 cut(s)	500
DdeI	CTNAG	3 cut(s)	104, 729, 780
DinI	GGCGCC	1 cut(s)	678
DpnI	GATC	6 cut(s)	480, 853, 972, 1125, 1199, 1344
DpnII	GATC	6 cut(s)	478, 851, 970, 1123, 1197, 1342
DraI	TTTAAA	1 cut(s)	1099
Eam1104I	CTCTTC	4 cut(s)	111, 174, 969, 981
EarI	CTCTTC	4 cut(s)	111, 174, 969, 981
EciI	GGCGGA	1 cut(s)	631
Ecl136II	GAGCTC	1 cut(s)	739
Eco105I	TACGTA	1 cut(s)	499
Eco130I	CCWWGG	1 cut(s)	110
Eco24I	GRGCYC	1 cut(s)	741
Eco31I	GGTCTC	1 cut(s)	966
Eco47I	GGWCC	2 cut(s)	368, 543
Eco53kI	GAGCTC	1 cut(s)	739
Eco57I	CTGAAG	1 cut(s)	613
Eco91I	GGTNACC	1 cut(s)	96
EcoICRI	GAGCTC	1 cut(s)	739
EcoO109I	RGGNCCY	1 cut(s)	368
EcoO65I	GGTNACC	1 cut(s)	96
EcoRII	CCWGG	4 cut(s)	370, 530, 579, 693
EcoT14I	CCWWGG	1 cut(s)	110
EcoT38I	GRGCYC	1 cut(s)	741
EgeI	GGCGCC	1 cut(s)	678
EheI	GGCGCC	1 cut(s)	678
ErhI	CCWWGG	1 cut(s)	110
Esp3I	CGTCTC	2 cut(s)	578, 748
FaeI	CATG	1 cut(s)	347
FaqI	GGGAC	1 cut(s)	638
FatI	CATG	1 cut(s)	343
FblI	GTMKAC	1 cut(s)	313
FokI	GGATG	5 cut(s)	91, 157, 563, 1031, 1232
FriOI	GRGCYC	1 cut(s)	741
FspBI	CTAG	1 cut(s)	842
GlaI	GCGC	2 cut(s)	185, 678
GsuI	CTGGAG	1 cut(s)	1034
HaeII	RGCGCY	2 cut(s)	187, 680
HaeIII	GGCC	2 cut(s)	443, 538
HapII	CCGG	5 cut(s)	39, 794, 820, 831, 1072
HgaI	GACGC	1 cut(s)	57
HhaI	GCGC	2 cut(s)	186, 679
Hin1I	GRCGYC	2 cut(s)	590, 677
Hin1II	CATG	1 cut(s)	347
Hin6I	GCGC	2 cut(s)	184, 677
HinP1I	GCGC	2 cut(s)	184, 677
HincII	GTYRAC	1 cut(s)	516
HindII	GTYRAC	1 cut(s)	516
HinfI	GANTC	6 cut(s)	227, 252, 281, 504, 512, 1157
HpaII	CCGG	5 cut(s)	39, 794, 820, 831, 1072
HphI	GGTGA	2 cut(s)	53, 90
Hpy166II	GTNNAC	5 cut(s)	65, 314, 516, 889, 926
Hpy188I	TCNGA	7 cut(s)	30, 286, 543, 806, 975, 1133, 1162
Hpy188III	TCNNGA	6 cut(s)	338, 420, 704, 865, 890, 968
Hpy8I	GTNNAC	5 cut(s)	65, 314, 516, 889, 926
Hpy99I	CGWCG	2 cut(s)	592, 595
HpyAV	CCTTC	5 cut(s)	357, 433, 764, 1069, 1288
HpyCH4III	ACNGT	2 cut(s)	220, 886
HpyCH4IV	ACGT	4 cut(s)	238, 498, 590, 997
HpyCH4V	TGCA	8 cut(s)	65, 131, 389, 553, 604, 926, 1001, 1091
HpyF10VI	GCNNNNNNNGC	5 cut(s)	209, 295, 1076, 1085, 1171
HpyF3I	CTNAG	3 cut(s)	104, 729, 780
HpySE526I	ACGT	4 cut(s)	238, 498, 590, 997
Hsp92I	GRCGYC	2 cut(s)	590, 677
Hsp92II	CATG	1 cut(s)	347
HspAI	GCGC	2 cut(s)	184, 677
KasI	GGCGCC	1 cut(s)	676
Kzo9I	GATC	6 cut(s)	478, 851, 970, 1123, 1197, 1342
LguI	GCTCTTC	2 cut(s)	174, 981
LmnI	GCTCC	3 cut(s)	286, 1056, 1162
Lsp1109I	GCAGC	9 cut(s)	95, 212, 276, 588, 721, 959, 1075, 1079, 1204
LweI	GCATC	1 cut(s)	806
MaeI	CTAG	1 cut(s)	842
MaeII	ACGT	4 cut(s)	238, 498, 590, 997
MaeIII	GTNAC	7 cut(s)	34, 96, 239, 635, 1115, 1182, 1325
MalI	GATC	6 cut(s)	480, 853, 972, 1125, 1199, 1344
MbiI	CCGCTC	1 cut(s)	1217
MboI	GATC	6 cut(s)	478, 851, 970, 1123, 1197, 1342
MboII	GAAGA	5 cut(s)	128, 191, 956, 998, 1277
MflI	RGATCY	1 cut(s)	851
MhlI	GDGCHC	6 cut(s)	67, 300, 351, 741, 928, 1227
MluCI	AATT	4 cut(s)	213, 305, 1080, 1314
Mly113I	GGCGCC	1 cut(s)	677
MlyI	GAGTC	4 cut(s)	290, 513, 521, 1166
MmeI	TCCRAC	2 cut(s)	264, 1140
MseI	TTAA	8 cut(s)	233, 714, 897, 1083, 1098, 1284, 1313, 1322
MslI	CAYNNNNRTG	3 cut(s)	354, 1230, 1323
MspCI	CTTAAG	2 cut(s)	713, 1321
MspI	CCGG	5 cut(s)	39, 794, 820, 831, 1072
MspR9I	CCNGG	5 cut(s)	372, 532, 581, 695, 1072
MvaI	CCWGG	4 cut(s)	372, 532, 581, 695
MwoI	GCNNNNNNNGC	5 cut(s)	209, 295, 1076, 1085, 1171
NarI	GGCGCC	1 cut(s)	677
NciI	CCSGG	1 cut(s)	1072
NdeII	GATC	6 cut(s)	478, 851, 970, 1123, 1197, 1342
NlaIII	CATG	1 cut(s)	347
NlaIV	GGNNCC	6 cut(s)	369, 470, 490, 678, 1276, 1334
NmeAIII	GCCGAG	1 cut(s)	459
NmuCI	GTSAC	3 cut(s)	96, 635, 1325
OliI	CACNNNNGTG	1 cut(s)	1323
PciSI	GCTCTTC	2 cut(s)	174, 981
PfeI	GAWTC	2 cut(s)	227, 252
Pfl23II	CGTACG	1 cut(s)	499
PflFI	GACNNNGTC	2 cut(s)	51, 589
PfoI	TCCNGGA	1 cut(s)	579
PinAI	ACCGGT	2 cut(s)	38, 819
Ple19I	CGATCG	1 cut(s)	1126
PleI	GAGTC	4 cut(s)	289, 512, 520, 1165
PluTI	GGCGCC	1 cut(s)	680
PpsI	GAGTC	4 cut(s)	289, 512, 520, 1165
Ppu21I	YACGTR	1 cut(s)	499
PpuMI	RGGWCCY	1 cut(s)	368
PshBI	ATTAAT	1 cut(s)	1083
Psp124BI	GAGCTC	1 cut(s)	741
Psp1406I	AACGTT	1 cut(s)	238
Psp5II	RGGWCCY	1 cut(s)	368
Psp6I	CCWGG	4 cut(s)	370, 530, 579, 693
PspEI	GGTNACC	1 cut(s)	96
PspGI	CCWGG	4 cut(s)	370, 530, 579, 693
PspLI	CGTACG	1 cut(s)	499
PspN4I	GGNNCC	6 cut(s)	369, 470, 490, 678, 1276, 1334
PspPI	GGNCC	2 cut(s)	368, 543
PspPPI	RGGWCCY	1 cut(s)	368
PsuI	RGATCY	1 cut(s)	851
PsyI	GACNNNGTC	2 cut(s)	51, 589
PvuI	CGATCG	1 cut(s)	1126
RsaI	GTAC	1 cut(s)	501
RsaNI	GTAC	1 cut(s)	500
RseI	CAYNNNNRTG	3 cut(s)	354, 1230, 1323
SacI	GAGCTC	1 cut(s)	741
SapI	GCTCTTC	2 cut(s)	174, 981
SaqAI	TTAA	8 cut(s)	233, 714, 897, 1083, 1098, 1284, 1313, 1322
Sau3AI	GATC	6 cut(s)	478, 851, 970, 1123, 1197, 1342
Sau96I	GGNCC	2 cut(s)	368, 543
SchI	GAGTC	4 cut(s)	290, 513, 521, 1166
ScrFI	CCNGG	5 cut(s)	372, 532, 581, 695, 1072
SduI	GDGCHC	6 cut(s)	67, 300, 351, 741, 928, 1227
SfaNI	GCATC	1 cut(s)	806
SfcI	CTRYAG	2 cut(s)	204, 811
SfoI	GGCGCC	1 cut(s)	678
SinI	GGWCC	2 cut(s)	368, 543
SmiMI	CAYNNNNRTG	3 cut(s)	354, 1230, 1323
SmlI	CTYRAG	3 cut(s)	704, 713, 1321
SmoI	CTYRAG	3 cut(s)	704, 713, 1321
SnaBI	TACGTA	1 cut(s)	499
Sse9I	AATT	4 cut(s)	213, 305, 1080, 1314
SsiI	CCGC	5 cut(s)	535, 642, 645, 648, 1217
SspDI	GGCGCC	1 cut(s)	676
SspI	AATATT	1 cut(s)	942
SspMI	CTAG	1 cut(s)	842
SstI	GAGCTC	1 cut(s)	741
StyD4I	CCNGG	5 cut(s)	370, 530, 579, 693, 1070
StyI	CCWWGG	1 cut(s)	110
TaaI	ACNGT	2 cut(s)	220, 886
TaiI	ACGT	4 cut(s)	241, 501, 593, 1000
TaqI	TCGA	3 cut(s)	12, 222, 419
TasI	AATT	4 cut(s)	213, 305, 1080, 1314
TauI	GCSGC	3 cut(s)	538, 647, 650
TfiI	GAWTC	2 cut(s)	227, 252
Tru1I	TTAA	8 cut(s)	233, 714, 897, 1083, 1098, 1284, 1313, 1322
Tru9I	TTAA	8 cut(s)	233, 714, 897, 1083, 1098, 1284, 1313, 1322
TscAI	CASTG	3 cut(s)	72, 466, 933
TseFI	GTSAC	3 cut(s)	96, 635, 1325
TseI	GCWGC	9 cut(s)	83, 200, 289, 601, 709, 947, 1067, 1088, 1192
Tsp45I	GTSAC	3 cut(s)	96, 635, 1325
TspDTI	ATGAA	7 cut(s)	150, 210, 240, 367, 565, 1077, 1243
TspGWI	ACGGA	2 cut(s)	13, 157
TspRI	CASTG	3 cut(s)	72, 466, 933
Tth111I	GACNNNGTC	2 cut(s)	51, 589
Vha464I	CTTAAG	2 cut(s)	713, 1321
VneI	GTGCAC	2 cut(s)	63, 924
VpaK11BI	GGWCC	2 cut(s)	368, 543
VspI	ATTAAT	1 cut(s)	1083
XmiI	GTMKAC	1 cut(s)	313
XspI	CTAG	1 cut(s)	842
ZraI	GACGTC	1 cut(s)	591

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.