Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0001609

Physical Location & Seq

Genomic Coordinates Reverse (-)

21857607 .. 21861929

Gene Structure 4323 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G256200.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2361 bp

ATGCCTGATGAAGAGGTGATATTGGAAAACGCCACAGATCATCAAGAAGTTCCTGATCATCATCAGAATCAGGAGCTCAAATCCAAGAAACTTTCATGGCAAAAGCTGCGAAGATACGACTCCTTGGACCTCGAGTCACGCAGTTTCACTGCTCACCATGGCCATGCCTCCAAGGGTGCGGAGTGGTCGGTGATATTGCACCTAGCATTTCAGAGCATTGGAATAGTTTATGGGGACATCGGTACATCACCTCTCTATGTGTATTCAAGCACCTTTACCAAAGGCATCAATCATGATGACGACATTTTGGGTGTTCTTTCTTTGATCCTTTACACCCTCACCTTAATCCCTTTGATTAAGTACGTTTTCGTTGTCTTACGGGCAAACGATAATGGCGACGGAGGGACGTTCGCACTATACTCTTTGCTATGTCGATATGCCAAGGTTGGTTTGACTCCGAGTCAACAAGCAGAGGATCGGGATGTCTCAAATTTTGAGCTGGAGTTGCCGAGCAAACGCCTAAAGAGAGCATCAAGGCTGAAATCTAAATTAGAGAACAGCCCGTTTGCCAAAGTCTTCTTATTATTCGCCACCATGCTTGGTACTTCCATGGTCATTGGCGACGGTGTTCTCACTCCTTGCATCTCAGTTTTGTCGGCTGTTGGAGGGATCAAAGAAGCTACATCTGCAATGACAGAAGATCGGATTGTTTGGATATCAATAGCCATCCTGATTTGCCTCTTCATGGTTCAAAGATTTGGAACTGATAAAGTGGGCTACACTTTTGCACCAATCATTTGTGTTTGGTTTACACTGATTGGTGGCATTGGTGTCTACAACTTCATCAAGTTTGATCCTACGGTGGTCAAAGCCCTAAATCCACAATACATAGTAGATTACTTCAGGAGGAACAAAAAAGACGCTTGGATTTCTCTTGGTGGCATTGTCCTTGCCATAACAGGAACTGAAGCATTGTTTGCTGACGTGGGCCACTTCACAGTCCGATCCATTCAAATAAGTATGTGCGCAGTTACTTATCCAGCTCTCATATTGGCATACACTGGACAAGCCTCTTTTCTTCGCAACCACCATCATCTTGTTTATGAAACCTTCTTCAAGTCTATACCAGGGCCATTGTATTGGCCGATGTTTGTGGTGGCTGTATTGGCATCAATCATAGCCAGTCAAGCCATGATTTCAGGGACTTTCTCTATAATCCAACAGTCACTGTCATTAGGGTGTTTCCCTCGTGTCAAAATCGTGCACACATCGGCCAGGTACGCAGGACAAGTTTACATTCCGGAGGTCAACTACCTTCTCATGTTGGCTTGCGTTGGCGTGACTTTGGGTTTCCGAACCACTGCAAAGATTGGCAATGCATACGGTATAGCTGTGGTGTTTGTAATGACGCTTACGTCGTCGTTTCTAGTGCTAATCATGATAATGATATGGAAAACCAACATATTTTTGGTCATCTCATATGTTCTTGTCATTGGAAGTGTGGAGTTAATGTATCTAAGTTCGGTGCTCTACAAATTCGACCAAGGTGGATATCTTCCCCTCGCCTTTGCCATGGTCTTGATGATTATAATGTTTGTGTGGAATGATGTGCATCGGAGAAAGTACTATTACGAGCTTGATCACAAAATCTCTCCAGTACAACTCAAGGAAATTGCTGTTAGCGCAAACTTTTGTCGAATGCCTGGCCTCGCCATGTTCTATTCGGAGCTTGTTCAAGGCATCCCTCCGATCTTCAATCATTATGCAGCAAATGTGCCTGCATTGCACTCGGTCCTTGTTTTCGTCTCCATTAAATCGTTGCCTATAAGCAAGGTTCCATTGGAAGAGCGATTTCTTTTTCGGAGAGTAGAGCCTAAGGAGCTCAATGTGTTTCGATGTGTTGCAAGATATGGGTACACAGATGTTCGAAATGAGCATGAACCCTTTGAAGGGTTGTTGGTGGAGAAATTGAAAGAGTTCATAAAGGATAGTTTTTGGATATCTCAAAGAAATATGGACGATAATAATGGGGAGAAATTTGACATCAAGGAGGAGGAATTCGATGACGGGCTGGCTAACGGTGAGAATGGCAACGAGGATGTGAAGCAAGTTGATGATCAAGAGAAGCAACAAGATTTACTGGACGAAGACATTGAAGCCATAGACAAAGCATGGAGGTGGGGGGTTGTTCACCTAATTGGAGAAAATGAAGTGACGGCTGCAAAAGGAGCTGGTATAGTTAAAAGAATTTTAATTGATTATGCTTACAACTTCTTGAAGAGGAATTTGAGACAGAGTGATAAAGTGTTTGATATTCCTCACAAACGCATGTTGAAAGTGGGCATGACTTATGAGCTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006814 GO:0008150 GO:0008324 GO:0009674 GO:0009987 GO:0010107 GO:0015075 GO:0015077 GO:0015079 GO:0015081 GO:0015291 GO:0015293 GO:0015294 GO:0015318 GO:0015370 GO:0015672 GO:0016020 GO:0022804 GO:0022857 GO:0022890 GO:0030001 GO:0034220 GO:0035725 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0071804 GO:0071805 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

K_trans

Protein Analysis

787

Amino Acids

88.75

Weight (kDa)

6.59

Isoelectric Point (pI)

32.12

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001609)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g30541 FvH4_6g30550 FvH4_c6g00050 FvH4_c6g00050 FvH4_c6g00050
malus_domestica	MD03G1283500.v1.1 MD03G1283600.v1.1 MD10G1230200.v1.1 MD10G1230300.v1.1 MD11G1302600.v1.1 MD11G1302900.v1.1 MD11G1303100.v1.1
prunus_persica	Prupe.8G256200_v2.0.a1 Prupe.8G256200_v2.0.a1 Prupe.8G256200_v2.0.a1 Prupe.8G256200_v2.0.a1
pyrus_communis	pycom03g22450 pycom03g22460
rosa_chinensis	RchiOBHm_Chr2g0136981 RchiOBHm_Chr5g0020481 RchiOBHm_Chr6g0293251
rosa_laevigata	RLG00000011964 RLG00000033905
rosa_multiflora	Rmu_co8314359.1_g000001 Rmu_sc0001374.1_g000063 Rmu_sc0001374.1_g000064 Rmu_sc0021490.1_g000001 Rmu_ssc0000162.1_g000030
rosa_roxburghii	Rroxscaffold_2G00107800 Rroxscaffold_2G00107830 Rroxscaffold_7G00174310
rosa_rugosa	Rorug02G0336400 Rorug06G0233800 Rorug06G0233800 Rorug06G0233800
rosa_samantha	Rh2AG385800 Rh2BG392700 Rh2CG373000 Rh2DG047100 Rh2DG408800 Rh2DG408900 Rh3DG241600 Rh3DG283500 Rh6AG346700 Rh6BG354100 Rh6CG360600 Rh6DG347100
rosa_wichuraiana	Rw2G003360 Rw2G031570 Rw6G030180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1589
AasI	GACNNNNNNGTC	1 cut(s)	1414
Acc16I	TGCGCA	1 cut(s)	1027
AccI	GTMKAC	1 cut(s)	834
AccIII	TCCGGA	1 cut(s)	1300
AciI	CCGC	1 cut(s)	179
AclWI	GGATC	5 cut(s)	319, 483, 677, 848, 999
AcoI	YGGCCR	3 cut(s)	160, 1142, 1272
AcsI	RAATTY	6 cut(s)	490, 1535, 2036, 2057, 2247, 2284
AcuI	CTGAAG	2 cut(s)	886, 987
AfaI	GTAC	7 cut(s)	244, 362, 604, 1280, 1625, 1659, 1916
AfiI	CCNNNNNNNGG	3 cut(s)	745, 1949, 1950
AhdI	GACNNNNNGTC	2 cut(s)	133, 459
AjiI	CACGTC	1 cut(s)	985
AjnI	CCWGG	3 cut(s)	1126, 1274, 1702
Alw21I	GWGCWC	4 cut(s)	78, 1266, 1530, 1884
Alw26I	GTCTC	3 cut(s)	490, 1810, 2284
Alw44I	GTGCAC	1 cut(s)	1262
AlwI	GGATC	5 cut(s)	319, 483, 677, 848, 999
AlwNI	CAGNNNCTG	2 cut(s)	965, 1228
Ama87I	CYCGRG	1 cut(s)	131
Aor13HI	TCCGGA	1 cut(s)	1300
AoxI	GGCC	6 cut(s)	160, 988, 1130, 1142, 1272, 1705
ApaLI	GTGCAC	1 cut(s)	1262
ApeKI	GCWGC	3 cut(s)	106, 1766, 2219
ApoI	RAATTY	6 cut(s)	490, 1535, 2036, 2057, 2247, 2284
Asp700I	GAANNNNTTC	1 cut(s)	1976
AspLEI	GCGC	2 cut(s)	1028, 1685
AspS9I	GGNCC	4 cut(s)	127, 988, 1130, 1792
AsuHPI	GGTGA	7 cut(s)	28, 146, 202, 240, 331, 2093, 2183
AsuII	TTCGAA	1 cut(s)	1927
AvaI	CYCGRG	1 cut(s)	131
AvaII	GGWCC	2 cut(s)	127, 1792
AxyI	CCTNAGG	1 cut(s)	1875
BaeGI	GKGCMC	1 cut(s)	1266
BalI	TGGCCA	1 cut(s)	162
BanII	GRGCYC	2 cut(s)	78, 1884
BauI	CACGAG	1 cut(s)	1248
BbsI	GAAGAC	2 cut(s)	568, 2154
Bbv12I	GWGCWC	4 cut(s)	78, 1266, 1530, 1884
BbvI	GCAGC	3 cut(s)	93, 1778, 2206
BccI	CCATC	2 cut(s)	734, 1098
BceAI	ACGGC	1 cut(s)	2232
BcgI	CGANNNNNNTGC	2 cut(s)	1770, 1804
BciT130I	CCWGG	3 cut(s)	1128, 1276, 1704
BclI	TGATCA	3 cut(s)	55, 1639, 2116
BcoDI	GTCTC	3 cut(s)	490, 1810, 2284
BfaI	CTAG	2 cut(s)	203, 1427
BisI	GCNGC	3 cut(s)	107, 1767, 2220
BlsI	GCNGC	3 cut(s)	108, 1768, 2221
BmcAI	AGTACT	1 cut(s)	1625
Bme1390I	CCNGG	3 cut(s)	1128, 1276, 1704
Bme18I	GGWCC	2 cut(s)	127, 1792
BmeRI	GACNNNNNGTC	2 cut(s)	133, 459
BmeT110I	CYCGRG	1 cut(s)	131
BmgBI	CACGTC	1 cut(s)	985
BmgT120I	GGNCC	4 cut(s)	127, 988, 1130, 1792
BmiI	GGNNCC	1 cut(s)	1836
BmrFI	CCNGG	3 cut(s)	1128, 1276, 1704
BmsI	GCATC	6 cut(s)	294, 539, 651, 1178, 1621, 1749
BpiI	GAAGAC	2 cut(s)	568, 2154
BpmI	CTGGAG	2 cut(s)	521, 1638
Bpu14I	TTCGAA	1 cut(s)	1927
BpuEI	CTTGAG	1 cut(s)	1649
BsaBI	GATNNNNATC	2 cut(s)	60, 1611
BsaJI	CCNNGG	8 cut(s)	123, 157, 171, 441, 609, 1127, 1543, 1572
BsaWI	WCCGGW	1 cut(s)	1300
BsaXI	ACNNNNNCTCC	2 cut(s)	1496, 1526
Bsc4I	CCNNNNNNNGG	3 cut(s)	745, 1949, 1950
Bse1I	ACTGG	4 cut(s)	1066, 1182, 1655, 2145
Bse21I	CCTNAGG	1 cut(s)	1875
Bse3DI	GCAATG	3 cut(s)	696, 1381, 1781
Bse8I	GATNNNNATC	2 cut(s)	60, 1611
BseAI	TCCGGA	1 cut(s)	1300
BseBI	CCWGG	3 cut(s)	1128, 1276, 1704
BseDI	CCNNGG	8 cut(s)	123, 157, 171, 441, 609, 1127, 1543, 1572
BseGI	GGATG	4 cut(s)	487, 726, 1740, 2104
BseJI	GATNNNNATC	2 cut(s)	60, 1611
BseLI	CCNNNNNNNGG	3 cut(s)	745, 1949, 1950
BseMI	GCAATG	3 cut(s)	696, 1381, 1781
BseMII	CTCAG	1 cut(s)	660
BseNI	ACTGG	4 cut(s)	1066, 1182, 1655, 2145
BseRI	GAGGAG	1 cut(s)	2066
BseSI	GKGCMC	1 cut(s)	1266
BseXI	GCAGC	3 cut(s)	93, 1778, 2206
BshFI	GGCC	6 cut(s)	162, 990, 1132, 1144, 1274, 1707
BsiHKAI	GWGCWC	4 cut(s)	78, 1266, 1530, 1884
BsiHKCI	CYCGRG	1 cut(s)	131
BsiSI	CCGG	1 cut(s)	1301
BslFI	GGGAC	3 cut(s)	248, 418, 1216
BslI	CCNNNNNNNGG	3 cut(s)	745, 1949, 1950
BsmAI	GTCTC	3 cut(s)	490, 1810, 2284
BsmBI	CGTCTC	1 cut(s)	1810
BsmFI	GGGAC	3 cut(s)	248, 418, 1216
BsmI	GAATGC	1 cut(s)	1704
BsnI	GGCC	6 cut(s)	162, 990, 1132, 1144, 1274, 1707
BsoBI	CYCGRG	1 cut(s)	131
Bsp119I	TTCGAA	1 cut(s)	1927
Bsp1286I	GDGCHC	4 cut(s)	78, 1266, 1530, 1884
Bsp13I	TCCGGA	1 cut(s)	1300
Bsp19I	CCATGG	3 cut(s)	157, 609, 1572
BspACI	CCGC	1 cut(s)	179
BspANI	GGCC	6 cut(s)	162, 990, 1132, 1144, 1274, 1707
BspCNI	CTCAG	1 cut(s)	659
BspEI	TCCGGA	1 cut(s)	1300
BspHI	TCATGA	2 cut(s)	292, 1437
BspLI	GGNNCC	1 cut(s)	1836
BspPI	GGATC	5 cut(s)	319, 483, 677, 848, 999
BspQI	GCTCTTC	1 cut(s)	1839
BspT104I	TTCGAA	1 cut(s)	1927
BsrDI	GCAATG	3 cut(s)	696, 1381, 1781
BsrI	ACTGG	4 cut(s)	1066, 1182, 1655, 2145
BssECI	CCNNGG	8 cut(s)	123, 157, 171, 441, 609, 1127, 1543, 1572
BssSI	CACGAG	1 cut(s)	1248
BssT1I	CCWWGG	7 cut(s)	123, 157, 171, 441, 609, 1543, 1572
Bst2BI	CACGAG	1 cut(s)	1248
Bst2UI	CCWGG	3 cut(s)	1128, 1276, 1704
Bst4CI	ACNGT	7 cut(s)	626, 862, 1000, 1224, 1230, 1385, 2081
Bst6I	CTCTTC	4 cut(s)	6, 746, 1839, 2273
BstAPI	GCANNNNNTGC	2 cut(s)	106, 977
BstBI	TTCGAA	1 cut(s)	1927
BstC8I	GCNNGC	3 cut(s)	1330, 1779, 2073
BstDEI	CTNAG	3 cut(s)	646, 1517, 1875
BstDSI	CCRYGG	3 cut(s)	157, 609, 1572
BstF5I	GGATG	4 cut(s)	487, 726, 1740, 2104
BstHHI	GCGC	2 cut(s)	1028, 1685
BstMAI	GTCTC	3 cut(s)	490, 1810, 2284
BstNI	CCWGG	3 cut(s)	1128, 1276, 1704
BstNSI	RCATGY	1 cut(s)	2332
BstSCI	CCNGG	3 cut(s)	1126, 1274, 1702
BstSLI	GKGCMC	1 cut(s)	1266
BstV1I	GCAGC	3 cut(s)	93, 1778, 2206
BstV2I	GAAGAC	2 cut(s)	568, 2154
BstXI	CCANNNNNNTGG	1 cut(s)	1140
Bsu36I	CCTNAGG	1 cut(s)	1875
BsuRI	GGCC	6 cut(s)	162, 990, 1132, 1144, 1274, 1707
BtgI	CCRYGG	3 cut(s)	157, 609, 1572
BtrI	CACGTC	1 cut(s)	985
BtsCI	GGATG	4 cut(s)	487, 726, 1740, 2104
BtsI	GCAGTG	2 cut(s)	147, 1359
BtsIMutI	CAGTG	5 cut(s)	147, 812, 1059, 1226, 1359
Cac8I	GCNNGC	3 cut(s)	1330, 1779, 2073
CaiI	CAGNNNCTG	2 cut(s)	965, 1228
CciI	TCATGA	2 cut(s)	292, 1437
CfoI	GCGC	2 cut(s)	1028, 1685
Cfr13I	GGNCC	4 cut(s)	127, 988, 1130, 1792
CseI	GACGC	2 cut(s)	929, 1417
Csp6I	GTAC	7 cut(s)	243, 361, 603, 1279, 1624, 1658, 1915
CspCI	CAANNNNNGTGG	2 cut(s)	580, 615
CviQI	GTAC	7 cut(s)	243, 361, 603, 1279, 1624, 1658, 1915
DdeI	CTNAG	3 cut(s)	646, 1517, 1875
DrdI	GACNNNNNNGTC	1 cut(s)	1414
DriI	GACNNNNNGTC	2 cut(s)	133, 459
DseDI	GACNNNNNNGTC	1 cut(s)	1414
EaeI	YGGCCR	3 cut(s)	160, 1142, 1272
Eam1104I	CTCTTC	4 cut(s)	6, 746, 1839, 2273
Eam1105I	GACNNNNNGTC	2 cut(s)	133, 459
EarI	CTCTTC	4 cut(s)	6, 746, 1839, 2273
Ecl136II	GAGCTC	2 cut(s)	76, 1882
Eco130I	CCWWGG	7 cut(s)	123, 157, 171, 441, 609, 1543, 1572
Eco24I	GRGCYC	2 cut(s)	78, 1884
Eco32I	GATATC	3 cut(s)	717, 1553, 2001
Eco47I	GGWCC	2 cut(s)	127, 1792
Eco53kI	GAGCTC	2 cut(s)	76, 1882
Eco57I	CTGAAG	2 cut(s)	886, 987
Eco81I	CCTNAGG	1 cut(s)	1875
Eco88I	CYCGRG	1 cut(s)	131
EcoICRI	GAGCTC	2 cut(s)	76, 1882
EcoRI	GAATTC	1 cut(s)	2057
EcoRII	CCWGG	3 cut(s)	1126, 1274, 1702
EcoRV	GATATC	3 cut(s)	717, 1553, 2001
EcoT14I	CCWWGG	7 cut(s)	123, 157, 171, 441, 609, 1543, 1572
EcoT22I	ATGCAT	1 cut(s)	1381
EcoT38I	GRGCYC	2 cut(s)	78, 1884
ErhI	CCWWGG	7 cut(s)	123, 157, 171, 441, 609, 1543, 1572
Esp3I	CGTCTC	1 cut(s)	1810
FaqI	GGGAC	3 cut(s)	248, 418, 1216
FauNDI	CATATG	1 cut(s)	1480
FbaI	TGATCA	3 cut(s)	55, 1639, 2116
FblI	GTMKAC	1 cut(s)	834
Fnu4HI	GCNGC	3 cut(s)	107, 1767, 2220
FokI	GGATG	4 cut(s)	494, 713, 1727, 2111
FriOI	GRGCYC	2 cut(s)	78, 1884
Fsp4HI	GCNGC	3 cut(s)	107, 1767, 2220
FspBI	CTAG	2 cut(s)	203, 1427
FspI	TGCGCA	1 cut(s)	1027
GlaI	GCGC	2 cut(s)	1027, 1684
GluI	GCNGC	3 cut(s)	107, 1767, 2220
GsuI	CTGGAG	2 cut(s)	521, 1638
HaeIII	GGCC	6 cut(s)	162, 990, 1132, 1144, 1274, 1707
HapII	CCGG	1 cut(s)	1301
HgaI	GACGC	2 cut(s)	929, 1417
HhaI	GCGC	2 cut(s)	1028, 1685
Hin6I	GCGC	2 cut(s)	1026, 1683
HinP1I	GCGC	2 cut(s)	1026, 1683
HincII	GTYRAC	2 cut(s)	464, 1309
HindII	GTYRAC	2 cut(s)	464, 1309
HinfI	GANTC	5 cut(s)	67, 119, 134, 454, 460
HpaII	CCGG	1 cut(s)	1301
HphI	GGTGA	7 cut(s)	28, 146, 202, 240, 331, 2093, 2183
Hpy166II	GTNNAC	8 cut(s)	464, 810, 835, 1264, 1294, 1309, 1917, 2191
Hpy8I	GTNNAC	8 cut(s)	464, 810, 835, 1264, 1294, 1309, 1917, 2191
Hpy99I	CGWCG	4 cut(s)	401, 626, 1420, 1423
HpyAV	CCTTC	3 cut(s)	1120, 1325, 1943
HpyCH4III	ACNGT	7 cut(s)	626, 862, 1000, 1224, 1230, 1385, 2081
HpyCH4IV	ACGT	4 cut(s)	363, 407, 984, 1415
HpyF3I	CTNAG	3 cut(s)	646, 1517, 1875
HpySE526I	ACGT	4 cut(s)	363, 407, 984, 1415
HspAI	GCGC	2 cut(s)	1026, 1683
Kpn2I	TCCGGA	1 cut(s)	1300
Ksp22I	TGATCA	3 cut(s)	55, 1639, 2116
LguI	GCTCTTC	1 cut(s)	1839
LmnI	GCTCC	4 cut(s)	73, 1726, 1879, 2228
Lsp1109I	GCAGC	3 cut(s)	93, 1778, 2206
LweI	GCATC	6 cut(s)	294, 539, 651, 1178, 1621, 1749
MaeI	CTAG	2 cut(s)	203, 1427
MaeII	ACGT	4 cut(s)	363, 407, 984, 1415
MaeIII	GTNAC	5 cut(s)	135, 1030, 1224, 1339, 2212
MhlI	GDGCHC	4 cut(s)	78, 1266, 1530, 1884
MlsI	TGGCCA	1 cut(s)	162
MluNI	TGGCCA	1 cut(s)	162
MlyI	GAGTC	4 cut(s)	113, 143, 448, 469
MmeI	TCCRAC	2 cut(s)	643, 1243
Mox20I	TGGCCA	1 cut(s)	162
Mph1103I	ATGCAT	1 cut(s)	1381
MroI	TCCGGA	1 cut(s)	1300
MroXI	GAANNNNTTC	1 cut(s)	1976
MscI	TGGCCA	1 cut(s)	162
MseI	TTAA	6 cut(s)	344, 357, 1508, 1812, 2241, 2252
MslI	CAYNNNNRTG	4 cut(s)	162, 1237, 1442, 2176
Msp20I	TGGCCA	1 cut(s)	162
MspI	CCGG	1 cut(s)	1301
MspR9I	CCNGG	3 cut(s)	1128, 1276, 1704
Mva1269I	GAATGC	1 cut(s)	1704
MvaI	CCWGG	3 cut(s)	1128, 1276, 1704
NcoI	CCATGG	3 cut(s)	157, 609, 1572
NdeI	CATATG	1 cut(s)	1480
NlaIV	GGNNCC	1 cut(s)	1836
NmeAIII	GCCGAG	1 cut(s)	534
NmuCI	GTSAC	4 cut(s)	135, 1224, 1339, 2212
NsbI	TGCGCA	1 cut(s)	1027
NsiI	ATGCAT	1 cut(s)	1381
NspI	RCATGY	1 cut(s)	2332
NspV	TTCGAA	1 cut(s)	1927
PaeR7I	CTCGAG	1 cut(s)	131
PagI	TCATGA	2 cut(s)	292, 1437
PciSI	GCTCTTC	1 cut(s)	1839
PcsI	WCGNNNNNNNCGW	2 cut(s)	393, 1415
PctI	GAATGC	1 cut(s)	1704
PdmI	GAANNNNTTC	1 cut(s)	1976
PfeI	GAWTC	1 cut(s)	67
PkrI	GCNGC	3 cut(s)	108, 1768, 2221
PleI	GAGTC	4 cut(s)	113, 142, 448, 468
PpsI	GAGTC	4 cut(s)	113, 142, 448, 468
PsiI	TTATAA	1 cut(s)	1589
Psp124BI	GAGCTC	2 cut(s)	78, 1884
Psp6I	CCWGG	3 cut(s)	1126, 1274, 1702
PspGI	CCWGG	3 cut(s)	1126, 1274, 1702
PspN4I	GGNNCC	1 cut(s)	1836
PspPI	GGNCC	4 cut(s)	127, 988, 1130, 1792
PspXI	VCTCGAGB	1 cut(s)	131
PstNI	CAGNNNCTG	2 cut(s)	965, 1228
RsaI	GTAC	7 cut(s)	244, 362, 604, 1280, 1625, 1659, 1916
RsaNI	GTAC	7 cut(s)	243, 361, 603, 1279, 1624, 1658, 1915
RseI	CAYNNNNRTG	4 cut(s)	162, 1237, 1442, 2176
SacI	GAGCTC	2 cut(s)	78, 1884
SapI	GCTCTTC	1 cut(s)	1839
SaqAI	TTAA	6 cut(s)	344, 357, 1508, 1812, 2241, 2252
SatI	GCNGC	3 cut(s)	107, 1767, 2220
Sau96I	GGNCC	4 cut(s)	127, 988, 1130, 1792
ScaI	AGTACT	1 cut(s)	1625
SchI	GAGTC	4 cut(s)	113, 143, 448, 469
ScrFI	CCNGG	3 cut(s)	1128, 1276, 1704
SduI	GDGCHC	4 cut(s)	78, 1266, 1530, 1884
SfaNI	GCATC	6 cut(s)	294, 539, 651, 1178, 1621, 1749
Sfr274I	CTCGAG	1 cut(s)	131
SfuI	TTCGAA	1 cut(s)	1927
SinI	GGWCC	2 cut(s)	127, 1792
SlaI	CTCGAG	1 cut(s)	131
SmiMI	CAYNNNNRTG	4 cut(s)	162, 1237, 1442, 2176
SmlI	CTYRAG	2 cut(s)	131, 1664
SmoI	CTYRAG	2 cut(s)	131, 1664
SsiI	CCGC	1 cut(s)	179
SspMI	CTAG	2 cut(s)	203, 1427
SstI	GAGCTC	2 cut(s)	78, 1884
StyD4I	CCNGG	3 cut(s)	1126, 1274, 1702
StyI	CCWWGG	7 cut(s)	123, 157, 171, 441, 609, 1543, 1572
TaaI	ACNGT	7 cut(s)	626, 862, 1000, 1224, 1230, 1385, 2081
TaiI	ACGT	4 cut(s)	366, 410, 987, 1418
TaqI	TCGA	7 cut(s)	132, 433, 1539, 1696, 1894, 1927, 2061
TaqII	GACCGA	1 cut(s)	1780
TatI	WGTACW	2 cut(s)	1623, 1657
TfiI	GAWTC	1 cut(s)	67
Tru1I	TTAA	6 cut(s)	344, 357, 1508, 1812, 2241, 2252
Tru9I	TTAA	6 cut(s)	344, 357, 1508, 1812, 2241, 2252
TscAI	CASTG	5 cut(s)	154, 819, 1066, 1233, 1366
TseFI	GTSAC	4 cut(s)	135, 1224, 1339, 2212
TseI	GCWGC	3 cut(s)	106, 1766, 2219
Tsp45I	GTSAC	4 cut(s)	135, 1224, 1339, 2212
TspDTI	ATGAA	8 cut(s)	24, 84, 733, 832, 1119, 1953, 1969, 2223
TspGWI	ACGGA	1 cut(s)	414
TspRI	CASTG	5 cut(s)	154, 819, 1066, 1233, 1366
VneI	GTGCAC	1 cut(s)	1262
VpaK11BI	GGWCC	2 cut(s)	127, 1792
XapI	RAATTY	6 cut(s)	490, 1535, 2036, 2057, 2247, 2284
XceI	RCATGY	1 cut(s)	2332
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1465
XhoI	CTCGAG	1 cut(s)	131
XmiI	GTMKAC	1 cut(s)	834
XmnI	GAANNNNTTC	1 cut(s)	1976
XspI	CTAG	2 cut(s)	203, 1427
ZrmI	AGTACT	1 cut(s)	1625
Zsp2I	ATGCAT	1 cut(s)	1381

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.