Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001609

Physical Location & Seq

Genomic Coordinates Reverse (-)

54413824 .. 54417540

Gene Structure 3717 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ50776

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2124 bp

ATGTGCATTTTACAGGAAATGACGTGGTCCGTAATACTGACCCTGGCATTTCAGAGCATTGGAGTTGTATATGGAGATCTTGGTACTTCACCACTTTATGTGTTCTCGAGCACCTTCCCCAATGGAATCAAAGATAAAGATGACATCTTGGGTGTTCTTTCTTTGATTCTTTATACAGTCACATTAATCCCCTTGATTAAGTATGTTCTCATCGTCCTACAAGCAAATGATAACGGCGATGGAGGGACATTTGCACTGTACTCTCTCTTATGTCGACACGCAAAGATTAGTTTGATTCCGAGCCAGCAAGAAGAGGATTCCAATGTTTCAAATTTCAAACTTGAAGTTCCTAGCAGACGTCTAAAAATGGCATCAACTCTTAAATCTGCACTGGAGAACAGTCACTTTGCCAAAGTCTTCTTACTCTTTGCCACAATGCTTGGCACTTCCATGGTCATTGGCGATGGTGTCCTCACTCCTTGCATCTCAGATATGATTGTGTGGATATCGGTAGCCATCTTGATAGTCCTTTTCATCATCCAAAGATTTGGAACTGACAAAGTGGGCTACAGTTTTGCTCCAATACTTTGTATTTGGTTTCTATTCATTGGTGTGATCGGCATGTACAATTTCATCAAATTTGATCCAATGGTTATCAAAGCCATAAATCCACGATACATAGTGGATTACTTCATACGGAACAAGAAAGAAGCTTGGATCTCCCTTGGTGGCGTTATTCTATGCATAACAGGAGCTGAAGCTCTGTTTGCTGATGTTGGCCACTTCACTGTTCGATCCATACAAATTAGTACATGCACGATTGTTTACCCATCTGTAGTGTTGGCTTACATTGGGCAAGCCTCTTTTCTTCGCAAGCATGCCGATCTTGTTGCTGATACCTTCTTCAAGTCTATACCAAGACCTATATATTGGCCTATGTTTGTTGTTGCTGTATTAGCATCAATAATAGCAAGTCAATCCCTGATTTCTGCGACCTTTTCCATAATTCAACAATCTCTGTCATTAGGGTGTTTCCCTCGTGTGAAAGTCGTGCACACATCATCCAAGTATGAAGGACAAGTTTATATTCCGGAGGTCAACTTCATTCTTATGTTGGCCTGTGTAGGGGTCACCTTGGCTTTTAGGACCACTACAAAGATTGGAAATGCACTAGGTATAGCAGTGGTGTTTGTAATGACACTAACTTCATCATTCCTCGTGCTAATTATGATAATGATATGGAAAACCCACATACTTCTCATTATCTCATATGTTCTTATTATTGGAAGTATGGAGCTTCTGTATTTAAGTTCAGTCCTTTACAAGTTTGACCAAGGGGGATATCTTCCAGTCGCCTTTGCCACTCTAATGATGGCTATAATGTTTGTTTGGAATGATGTTTATCGAAGAAAGTACTACTATGAGGTTGAACAGAAAATATCTCCTCAAAAGTTCAAGCAAATTGCTGATGATAGAAAATTTTGTCATATCCCTGGCCTCGCCATATTCTACTCGGAACTTGTTCATGGCATCCCACCCATTTTCAATCACTACTTAGCCAACGTGCCTGCATTGCACTCAGTCCTTGTTTTTGTCTCCATCAGACACTTACCCATAAGCAAGGTTCCGATGGAAGAGCGTCTCCTCTTCCGCCGAGTAGAGCCCAAGGAGCTTAATGTATTTCGATGTGTTGCGAGGTACGGGTATACAGATCTCTACAATGTGCAAGAACCCTTTGAAGAATTGTTGGTAAAAAAGTTGAAAGAGTTCTTGAAAGATGGTTGTTTCATACCCCAACAAACAAGTAATAATGGAGAGGTGTTTGAAAAGCAAGAAGAATTAAATGATGGATTGGTTGACAACGAGAATGAATTTGTTGACATACAACAAGAACTGATGGAGGCTGAGGTTCAACTTGAAGCAATAGATAAAGCATGGAGTTCAGGGGTTATTCACCTCATTGGTGAAAATGAAGTCATAGCTGCCAAAGGATCTGGTATAGCCAAAAGAATTTTGATTGATTATGCTTACAATTTTTTGAAGAGCAATTTGAGGCAGAGAGGCGAATTGTTTGAAATTCCTCGCAAGCGCATGCTAAAAGTGGGTATGACCTATGAACTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006814 GO:0008150 GO:0008324 GO:0009674 GO:0009987 GO:0010107 GO:0015075 GO:0015077 GO:0015079 GO:0015081 GO:0015291 GO:0015293 GO:0015294 GO:0015318 GO:0015370 GO:0015672 GO:0016020 GO:0022804 GO:0022857 GO:0022890 GO:0030001 GO:0034220 GO:0035725 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0071804 GO:0071805 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

K_trans

Protein Analysis

707

Amino Acids

79.82

Weight (kDa)

7.53

Isoelectric Point (pI)

30.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
K_trans	PF02705	15 - 485	4.3e-149	K+ potassium transporter integral membrane domain
K_trans_C	PF22776	498 - 707	2e-28	K+ potassium transporter C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001609)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g30541 FvH4_6g30550 FvH4_c6g00050 FvH4_c6g00050 FvH4_c6g00050
malus_domestica	MD03G1283500.v1.1 MD03G1283600.v1.1 MD10G1230200.v1.1 MD10G1230300.v1.1 MD11G1302600.v1.1 MD11G1302900.v1.1 MD11G1303100.v1.1
prunus_persica	Prupe.8G256200_v2.0.a1 Prupe.8G256200_v2.0.a1 Prupe.8G256200_v2.0.a1 Prupe.8G256200_v2.0.a1
pyrus_communis	pycom03g22450 pycom03g22460
rosa_chinensis	RchiOBHm_Chr2g0136981 RchiOBHm_Chr5g0020481 RchiOBHm_Chr6g0293251
rosa_laevigata	RLG00000011964 RLG00000033905
rosa_multiflora	Rmu_co8314359.1_g000001 Rmu_sc0001374.1_g000063 Rmu_sc0001374.1_g000064 Rmu_sc0021490.1_g000001 Rmu_ssc0000162.1_g000030
rosa_roxburghii	Rroxscaffold_2G00107800 Rroxscaffold_2G00107830 Rroxscaffold_7G00174310
rosa_rugosa	Rorug02G0336400 Rorug06G0233800 Rorug06G0233800 Rorug06G0233800
rosa_samantha	Rh2AG385800 Rh2BG392700 Rh2CG373000 Rh2DG047100 Rh2DG408800 Rh2DG408900 Rh3DG241600 Rh3DG283500 Rh6AG346700 Rh6BG354100 Rh6CG360600 Rh6DG347100
rosa_wichuraiana	Rw2G003360 Rw2G031570 Rw6G030180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	361
AccI	GTMKAC	2 cut(s)	274, 1706
AccIII	TCCGGA	1 cut(s)	1090
AciI	CCGC	1 cut(s)	1651
AclWI	GGATC	4 cut(s)	638, 725, 789, 1999
AcoI	YGGCCR	1 cut(s)	778
AcsI	RAATTY	6 cut(s)	331, 638, 1478, 1871, 2010, 2076
AcuI	CTGAAG	1 cut(s)	777
AcyI	GRCGYC	1 cut(s)	358
AfaI	GTAC	6 cut(s)	85, 260, 626, 811, 1415, 1700
AfiI	CCNNNNNNNGG	1 cut(s)	1125
AjiI	CACGTC	1 cut(s)	24
AjnI	CCWGG	2 cut(s)	42, 1492
AluBI	AGCT	6 cut(s)	713, 755, 761, 1297, 1672, 1982
AluI	AGCT	6 cut(s)	713, 755, 761, 1297, 1672, 1982
Alw21I	GWGCWC	2 cut(s)	113, 1056
Alw26I	GTCTC	2 cut(s)	1600, 1646
Alw44I	GTGCAC	1 cut(s)	1052
AlwI	GGATC	4 cut(s)	638, 725, 789, 1999
AlwNI	CAGNNNCTG	1 cut(s)	755
Ama87I	CYCGRG	1 cut(s)	106
Aor13HI	TCCGGA	1 cut(s)	1090
AoxI	GGCC	4 cut(s)	778, 932, 1116, 1495
ApaLI	GTGCAC	1 cut(s)	1052
ApeKI	GCWGC	1 cut(s)	1982
ApoI	RAATTY	6 cut(s)	331, 638, 1478, 1871, 2010, 2076
AseI	ATTAAT	1 cut(s)	185
Asp700I	GAANNNNTTC	2 cut(s)	1521, 1766
AspLEI	GCGC	1 cut(s)	2091
AspS9I	GGNCC	2 cut(s)	27, 1146
AsuHPI	GGTGA	4 cut(s)	81, 1123, 1946, 1976
AvaI	CYCGRG	1 cut(s)	106
AvaII	GGWCC	2 cut(s)	27, 1146
BaeGI	GKGCMC	1 cut(s)	1056
BalI	TGGCCA	1 cut(s)	780
BanII	GRGCYC	1 cut(s)	1665
BauI	CACGAG	2 cut(s)	1038, 1217
BbsI	GAAGAC	1 cut(s)	409
Bbv12I	GWGCWC	2 cut(s)	113, 1056
BbvCI	CCTCAGC	1 cut(s)	1905
BbvI	GCAGC	1 cut(s)	1969
BceAI	ACGGC	1 cut(s)	250
BcgI	CGANNNNNNTGC	2 cut(s)	872, 906
BciT130I	CCWGG	2 cut(s)	44, 1494
BcoDI	GTCTC	2 cut(s)	1600, 1646
BfaI	CTAG	2 cut(s)	351, 1172
BfmI	CTRYAG	2 cut(s)	568, 834
BglII	AGATCT	2 cut(s)	76, 1711
BisI	GCNGC	1 cut(s)	1983
BlsI	GCNGC	1 cut(s)	1984
BmcAI	AGTACT	1 cut(s)	1415
Bme1390I	CCNGG	2 cut(s)	44, 1494
Bme18I	GGWCC	2 cut(s)	27, 1146
BmeT110I	CYCGRG	1 cut(s)	106
BmgBI	CACGTC	1 cut(s)	24
BmgT120I	GGNCC	2 cut(s)	27, 1146
BmiI	GGNNCC	1 cut(s)	1626
BmrFI	CCNGG	2 cut(s)	44, 1494
BmsI	GCATC	4 cut(s)	380, 492, 968, 1539
BpiI	GAAGAC	1 cut(s)	409
BpmI	CTGGAG	1 cut(s)	413
Bpu10I	CCTNAGC	1 cut(s)	1905
BsaBI	GATNNNNATC	1 cut(s)	1401
BsaHI	GRCGYC	1 cut(s)	358
BsaJI	CCNNGG	7 cut(s)	42, 450, 724, 1134, 1333, 1492, 1665
BsaWI	WCCGGW	1 cut(s)	1090
BsaXI	ACNNNNNCTCC	2 cut(s)	1286, 1316
Bsc4I	CCNNNNNNNGG	1 cut(s)	1125
Bse1I	ACTGG	2 cut(s)	396, 1349
Bse3DI	GCAATG	1 cut(s)	1571
Bse8I	GATNNNNATC	1 cut(s)	1401
BseAI	TCCGGA	1 cut(s)	1090
BseBI	CCWGG	2 cut(s)	44, 1494
BseDI	CCNNGG	7 cut(s)	42, 450, 724, 1134, 1333, 1492, 1665
BseGI	GGATG	3 cut(s)	537, 1061, 1530
BseJI	GATNNNNATC	1 cut(s)	1401
BseLI	CCNNNNNNNGG	1 cut(s)	1125
BseMI	GCAATG	1 cut(s)	1571
BseMII	CTCAG	3 cut(s)	501, 1593, 1896
BseNI	ACTGG	2 cut(s)	396, 1349
BseRI	GAGGAG	2 cut(s)	1434, 1634
BseSI	GKGCMC	1 cut(s)	1056
BseXI	GCAGC	1 cut(s)	1969
BsgI	GTGCAG	1 cut(s)	372
BshFI	GGCC	4 cut(s)	780, 934, 1118, 1497
BsiHKAI	GWGCWC	2 cut(s)	113, 1056
BsiHKCI	CYCGRG	1 cut(s)	106
BsiSI	CCGG	1 cut(s)	1091
BslFI	GGGAC	1 cut(s)	259
BslI	CCNNNNNNNGG	1 cut(s)	1125
BsmAI	GTCTC	2 cut(s)	1600, 1646
BsmBI	CGTCTC	1 cut(s)	1646
BsmFI	GGGAC	1 cut(s)	259
BsnI	GGCC	4 cut(s)	780, 934, 1118, 1497
BsoBI	CYCGRG	1 cut(s)	106
Bsp1286I	GDGCHC	3 cut(s)	113, 1056, 1665
Bsp13I	TCCGGA	1 cut(s)	1090
Bsp1407I	TGTACA	1 cut(s)	624
Bsp143I	GATC	8 cut(s)	76, 615, 643, 717, 794, 883, 1711, 1991
Bsp19I	CCATGG	1 cut(s)	450
BspACI	CCGC	1 cut(s)	1651
BspANI	GGCC	4 cut(s)	780, 934, 1118, 1497
BspCNI	CTCAG	3 cut(s)	500, 1592, 1897
BspEI	TCCGGA	1 cut(s)	1090
BspLI	GGNNCC	1 cut(s)	1626
BspPI	GGATC	4 cut(s)	638, 725, 789, 1999
BspQI	GCTCTTC	2 cut(s)	1629, 2036
BsrDI	GCAATG	1 cut(s)	1571
BsrGI	TGTACA	1 cut(s)	624
BsrI	ACTGG	2 cut(s)	396, 1349
BssECI	CCNNGG	7 cut(s)	42, 450, 724, 1134, 1333, 1492, 1665
BssMI	GATC	8 cut(s)	76, 615, 643, 717, 794, 883, 1711, 1991
BssNAI	GTATAC	1 cut(s)	1707
BssNI	GRCGYC	1 cut(s)	358
BssSI	CACGAG	2 cut(s)	1038, 1217
BssT1I	CCWWGG	5 cut(s)	450, 724, 1134, 1333, 1665
Bst1107I	GTATAC	1 cut(s)	1707
Bst2BI	CACGAG	2 cut(s)	1038, 1217
Bst2UI	CCWGG	2 cut(s)	44, 1494
Bst4CI	ACNGT	5 cut(s)	178, 258, 401, 572, 790
Bst6I	CTCTTC	4 cut(s)	306, 1629, 1652, 2036
BstACI	GRCGYC	1 cut(s)	358
BstAUI	TGTACA	1 cut(s)	624
BstC8I	GCNNGC	7 cut(s)	305, 858, 875, 879, 1569, 2087, 2093
BstDEI	CTNAG	4 cut(s)	487, 1555, 1579, 1905
BstDSI	CCRYGG	1 cut(s)	450
BstEII	GGTNACC	1 cut(s)	1129
BstF5I	GGATG	3 cut(s)	537, 1061, 1530
BstHHI	GCGC	1 cut(s)	2091
BstKTI	GATC	8 cut(s)	79, 618, 646, 720, 797, 886, 1714, 1994
BstMAI	GTCTC	2 cut(s)	1600, 1646
BstMBI	GATC	8 cut(s)	76, 615, 643, 717, 794, 883, 1711, 1991
BstMWI	GCNNNNNNNGC	4 cut(s)	767, 956, 1573, 1669
BstNI	CCWGG	2 cut(s)	44, 1494
BstNSI	RCATGY	4 cut(s)	625, 816, 881, 2095
BstPI	GGTNACC	1 cut(s)	1129
BstSCI	CCNGG	2 cut(s)	42, 1492
BstSFI	CTRYAG	2 cut(s)	568, 834
BstSLI	GKGCMC	1 cut(s)	1056
BstV1I	GCAGC	1 cut(s)	1969
BstV2I	GAAGAC	1 cut(s)	409
BstX2I	RGATCY	4 cut(s)	76, 717, 1711, 1991
BstXI	CCANNNNNNTGG	1 cut(s)	548
BstYI	RGATCY	4 cut(s)	76, 717, 1711, 1991
BstZ17I	GTATAC	1 cut(s)	1707
BsuRI	GGCC	4 cut(s)	780, 934, 1118, 1497
BtgI	CCRYGG	1 cut(s)	450
BtgZI	GCGATG	2 cut(s)	252, 477
BtrI	CACGTC	1 cut(s)	24
BtsCI	GGATG	3 cut(s)	537, 1061, 1530
BtsI	GCAGTG	1 cut(s)	1188
BtsIMutI	CAGTG	4 cut(s)	254, 389, 786, 1188
Cac8I	GCNNGC	7 cut(s)	305, 858, 875, 879, 1569, 2087, 2093
CaiI	CAGNNNCTG	1 cut(s)	755
CfoI	GCGC	1 cut(s)	2091
Cfr13I	GGNCC	2 cut(s)	27, 1146
CseI	GACGC	1 cut(s)	1628
Csp6I	GTAC	6 cut(s)	84, 259, 625, 810, 1414, 1699
CspCI	CAANNNNNGTGG	2 cut(s)	421, 456
CviAII	CATG	7 cut(s)	451, 622, 813, 878, 1526, 1935, 2092
CviQI	GTAC	6 cut(s)	84, 259, 625, 810, 1414, 1699
DdeI	CTNAG	4 cut(s)	487, 1555, 1579, 1905
DpnI	GATC	8 cut(s)	78, 617, 645, 719, 796, 885, 1713, 1993
DpnII	GATC	8 cut(s)	76, 615, 643, 717, 794, 883, 1711, 1991
EaeI	YGGCCR	1 cut(s)	778
Eam1104I	CTCTTC	4 cut(s)	306, 1629, 1652, 2036
EarI	CTCTTC	4 cut(s)	306, 1629, 1652, 2036
EciI	GGCGGA	1 cut(s)	1640
Eco130I	CCWWGG	5 cut(s)	450, 724, 1134, 1333, 1665
Eco24I	GRGCYC	1 cut(s)	1665
Eco32I	GATATC	2 cut(s)	507, 1343
Eco47I	GGWCC	2 cut(s)	27, 1146
Eco57I	CTGAAG	1 cut(s)	777
Eco88I	CYCGRG	1 cut(s)	106
Eco91I	GGTNACC	1 cut(s)	1129
EcoO65I	GGTNACC	1 cut(s)	1129
EcoRII	CCWGG	2 cut(s)	42, 1492
EcoRV	GATATC	2 cut(s)	507, 1343
EcoT14I	CCWWGG	5 cut(s)	450, 724, 1134, 1333, 1665
EcoT22I	ATGCAT	1 cut(s)	746
EcoT38I	GRGCYC	1 cut(s)	1665
ErhI	CCWWGG	5 cut(s)	450, 724, 1134, 1333, 1665
Esp3I	CGTCTC	1 cut(s)	1646
FaeI	CATG	7 cut(s)	454, 625, 816, 881, 1529, 1938, 2095
FaqI	GGGAC	1 cut(s)	259
FatI	CATG	7 cut(s)	450, 621, 812, 877, 1525, 1934, 2091
FauNDI	CATATG	1 cut(s)	1270
FblI	GTMKAC	2 cut(s)	274, 1706
Fnu4HI	GCNGC	1 cut(s)	1983
FokI	GGATG	3 cut(s)	524, 1048, 1517
FriOI	GRGCYC	1 cut(s)	1665
Fsp4HI	GCNGC	1 cut(s)	1983
FspBI	CTAG	2 cut(s)	351, 1172
GlaI	GCGC	1 cut(s)	2090
GluI	GCNGC	1 cut(s)	1983
GsuI	CTGGAG	1 cut(s)	413
HaeIII	GGCC	4 cut(s)	780, 934, 1118, 1497
HapII	CCGG	1 cut(s)	1091
HgaI	GACGC	1 cut(s)	1628
HhaI	GCGC	1 cut(s)	2091
Hin1I	GRCGYC	1 cut(s)	358
Hin1II	CATG	7 cut(s)	454, 625, 816, 881, 1529, 1938, 2095
Hin6I	GCGC	1 cut(s)	2089
HinP1I	GCGC	1 cut(s)	2089
HincII	GTYRAC	4 cut(s)	275, 1099, 1858, 1879
HindII	GTYRAC	4 cut(s)	275, 1099, 1858, 1879
HindIII	AAGCTT	1 cut(s)	711
HinfI	GANTC	4 cut(s)	126, 166, 295, 317
HpaII	CCGG	1 cut(s)	1091
HphI	GGTGA	4 cut(s)	81, 1123, 1946, 1976
Hpy166II	GTNNAC	7 cut(s)	275, 826, 1054, 1099, 1707, 1858, 1879
Hpy188I	TCNGA	6 cut(s)	54, 300, 490, 1516, 1604, 1629
Hpy188III	TCNNGA	4 cut(s)	106, 520, 1091, 1771
Hpy8I	GTNNAC	7 cut(s)	275, 826, 1054, 1099, 1707, 1858, 1879
HpyAV	CCTTC	3 cut(s)	124, 910, 1067
HpyCH4III	ACNGT	5 cut(s)	178, 258, 401, 572, 790
HpyCH4IV	ACGT	3 cut(s)	23, 358, 1563
HpyF10VI	GCNNNNNNNGC	4 cut(s)	767, 956, 1573, 1669
HpyF3I	CTNAG	4 cut(s)	487, 1555, 1579, 1905
HpySE526I	ACGT	3 cut(s)	23, 358, 1563
Hsp92I	GRCGYC	1 cut(s)	358
Hsp92II	CATG	7 cut(s)	454, 625, 816, 881, 1529, 1938, 2095
HspAI	GCGC	1 cut(s)	2089
Kpn2I	TCCGGA	1 cut(s)	1090
Kzo9I	GATC	8 cut(s)	76, 615, 643, 717, 794, 883, 1711, 1991
LguI	GCTCTTC	2 cut(s)	1629, 2036
LmnI	GCTCC	4 cut(s)	583, 752, 1294, 1669
Lsp1109I	GCAGC	1 cut(s)	1969
LweI	GCATC	4 cut(s)	380, 492, 968, 1539
MaeI	CTAG	2 cut(s)	351, 1172
MaeII	ACGT	3 cut(s)	23, 358, 1563
MaeIII	GTNAC	3 cut(s)	178, 401, 1129
MalI	GATC	8 cut(s)	78, 617, 645, 719, 796, 885, 1713, 1993
MboI	GATC	8 cut(s)	76, 615, 643, 717, 794, 883, 1711, 1991
MflI	RGATCY	4 cut(s)	76, 717, 1711, 1991
MhlI	GDGCHC	3 cut(s)	113, 1056, 1665
MlsI	TGGCCA	1 cut(s)	780
MluNI	TGGCCA	1 cut(s)	780
Mox20I	TGGCCA	1 cut(s)	780
Mph1103I	ATGCAT	1 cut(s)	746
MroI	TCCGGA	1 cut(s)	1090
MroXI	GAANNNNTTC	2 cut(s)	1521, 1766
MscI	TGGCCA	1 cut(s)	780
MseI	TTAA	6 cut(s)	185, 198, 381, 1307, 1674, 1841
MslI	CAYNNNNRTG	5 cut(s)	449, 611, 1027, 1109, 1367
Msp20I	TGGCCA	1 cut(s)	780
MspI	CCGG	1 cut(s)	1091
MspR9I	CCNGG	2 cut(s)	44, 1494
MvaI	CCWGG	2 cut(s)	44, 1494
MwoI	GCNNNNNNNGC	4 cut(s)	767, 956, 1573, 1669
NcoI	CCATGG	1 cut(s)	450
NdeI	CATATG	1 cut(s)	1270
NdeII	GATC	8 cut(s)	76, 615, 643, 717, 794, 883, 1711, 1991
NlaIII	CATG	7 cut(s)	454, 625, 816, 881, 1529, 1938, 2095
NlaIV	GGNNCC	1 cut(s)	1626
NmeAIII	GCCGAG	1 cut(s)	1679
NmuCI	GTSAC	3 cut(s)	178, 401, 1129
NsiI	ATGCAT	1 cut(s)	746
NspI	RCATGY	4 cut(s)	625, 816, 881, 2095
PaeI	GCATGC	2 cut(s)	881, 2095
PaeR7I	CTCGAG	1 cut(s)	106
PciSI	GCTCTTC	2 cut(s)	1629, 2036
PdmI	GAANNNNTTC	2 cut(s)	1521, 1766
PfeI	GAWTC	4 cut(s)	126, 166, 295, 317
PflFI	GACNNNGTC	1 cut(s)	25
PkrI	GCNGC	1 cut(s)	1984
PshBI	ATTAAT	1 cut(s)	185
Psp6I	CCWGG	2 cut(s)	42, 1492
PspEI	GGTNACC	1 cut(s)	1129
PspGI	CCWGG	2 cut(s)	42, 1492
PspN4I	GGNNCC	1 cut(s)	1626
PspPI	GGNCC	2 cut(s)	27, 1146
PstNI	CAGNNNCTG	1 cut(s)	755
PsuI	RGATCY	4 cut(s)	76, 717, 1711, 1991
PsyI	GACNNNGTC	1 cut(s)	25
RsaI	GTAC	6 cut(s)	85, 260, 626, 811, 1415, 1700
RsaNI	GTAC	6 cut(s)	84, 259, 625, 810, 1414, 1699
RseI	CAYNNNNRTG	5 cut(s)	449, 611, 1027, 1109, 1367
SalI	GTCGAC	1 cut(s)	273
SapI	GCTCTTC	2 cut(s)	1629, 2036
SaqAI	TTAA	6 cut(s)	185, 198, 381, 1307, 1674, 1841
SatI	GCNGC	1 cut(s)	1983
Sau3AI	GATC	8 cut(s)	76, 615, 643, 717, 794, 883, 1711, 1991
Sau96I	GGNCC	2 cut(s)	27, 1146
ScaI	AGTACT	1 cut(s)	1415
ScrFI	CCNGG	2 cut(s)	44, 1494
SduI	GDGCHC	3 cut(s)	113, 1056, 1665
SfaNI	GCATC	4 cut(s)	380, 492, 968, 1539
SfcI	CTRYAG	2 cut(s)	568, 834
Sfr274I	CTCGAG	1 cut(s)	106
SinI	GGWCC	2 cut(s)	27, 1146
SlaI	CTCGAG	1 cut(s)	106
SmiMI	CAYNNNNRTG	5 cut(s)	449, 611, 1027, 1109, 1367
SmlI	CTYRAG	1 cut(s)	106
SmoI	CTYRAG	1 cut(s)	106
SphI	GCATGC	2 cut(s)	881, 2095
SsiI	CCGC	1 cut(s)	1651
SspMI	CTAG	2 cut(s)	351, 1172
StyD4I	CCNGG	2 cut(s)	42, 1492
StyI	CCWWGG	5 cut(s)	450, 724, 1134, 1333, 1665
TaaI	ACNGT	5 cut(s)	178, 258, 401, 572, 790
TaiI	ACGT	3 cut(s)	26, 361, 1566
TaqI	TCGA	5 cut(s)	107, 274, 793, 1405, 1684
TatI	WGTACW	4 cut(s)	258, 624, 809, 1413
TfiI	GAWTC	4 cut(s)	126, 166, 295, 317
Tru1I	TTAA	6 cut(s)	185, 198, 381, 1307, 1674, 1841
Tru9I	TTAA	6 cut(s)	185, 198, 381, 1307, 1674, 1841
TscAI	CASTG	4 cut(s)	261, 396, 793, 1188
TseFI	GTSAC	3 cut(s)	178, 401, 1129
TseI	GCWGC	1 cut(s)	1982
Tsp45I	GTSAC	3 cut(s)	178, 401, 1129
TspGWI	ACGGA	2 cut(s)	19, 712
TspRI	CASTG	4 cut(s)	261, 396, 793, 1188
Tth111I	GACNNNGTC	1 cut(s)	25
VneI	GTGCAC	1 cut(s)	1052
VpaK11BI	GGWCC	2 cut(s)	27, 1146
VspI	ATTAAT	1 cut(s)	185
XapI	RAATTY	6 cut(s)	331, 638, 1478, 1871, 2010, 2076
XceI	RCATGY	4 cut(s)	625, 816, 881, 2095
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1369
XhoI	CTCGAG	1 cut(s)	106
XmiI	GTMKAC	2 cut(s)	274, 1706
XmnI	GAANNNNTTC	2 cut(s)	1521, 1766
XspI	CTAG	2 cut(s)	351, 1172
ZraI	GACGTC	1 cut(s)	359
ZrmI	AGTACT	1 cut(s)	1415
Zsp2I	ATGCAT	1 cut(s)	746

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.