Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0001609

Physical Location & Seq

Genomic Coordinates Forward (+)

14002246 .. 14006623

Gene Structure 4378 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00174310.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2247 bp

ATGCCTGAAGATGCAATATTAGAAAACGGTACAGATCAGGATCCTAAAAGCCATGACCGCCAAGAAGAAGTAGTAGTACTTCCTCATCATCCGGATCATCAACAACTCAAAGGCAAGAAACTTTCATGGCAAAAGTTACGTAGATTCGACTCCTTGGACATCGAGTCACGCAGTGTCAACGGTCACCATGGCCATAGCTCCCAGGGTGCAAGTTGGTCGGTGATACTGCACCTAGCATTTCAGAGCCTTGGAATAGTCTATGGAGACATTGGTACATCACCTCTATATGTGTATGCGAGTACCTTCACCAATGGCATCAAGGACATAGATGACATCTTGGGTGTTCTTTCTTTGATCATATACACCATCACCTTAATCCCCTTGATTAAGTACGTCTTCATCGTCCTCCGAGCCAACGATAATGGCGACGGGACGTTCGCACTTTACTCTCTGTTGTGTCGATATGCCAAGGTTGGTTTGACTCCGAGTCAGCAAGCCGAAGACCGCGATGTTTCAAATTTCCAACTTGAGTTGCCTAGCAAACGCCTAAGGAGGGCATCGAAGCTTAAATCAAAATTAGAGAACAGCAGATTTGCCAAGTACTTTTTACTATTCGCCACCATGCTTGGTACTTCTATGGTTATTGGTGATGGCGTCCTCACTCCTTGCATCTCAGTTCTATCGGCTGTTGGAGGGATGAAACAAGCCACATCTGCCCTGACCGACGATATGGTTGTTTGGATATCAGTAGGCATCTTGGTTTGCCTATTCATGGTTCAGAGATTTGGAACTGACAAAGTTGGCTACAGTTTTGCACCAATAATTTGTGTTTGGTTTACCTTCATTGGTGGCATTGGCGTCTACAATTTCTTCAAATACGATCCAACAGTTTTGAAAGCTCTAAATCCAAGATACATAGTCGATTACTTCAGGAGAAACAAAGGAGATGCTTGGATTTCCCTCGGTGGCATTGTTCTTGCCATTACAGGAACTGAAGCCCTGTTTGCCGATGTTGGCCACTTCACAGTTCGATCTATTCAGATTAGTATGTGCTCAGTGACTTACCCGGCTCTCCTACTTGCATATACCGGACAAGCCTCTTTTCTGCGTGAGCACAAGACTCTAGTTTCGAACACCTTCTATGAGTCCATACCAAATCCTTTGTATTGGCCTATGTTTGGGGTTGCCGTAATGGCATCAATCATAGCCAGCCAAGCCATGATTTCGGGACAAGTTTACATTCCGGAGGTCAACTACCTTCTCATGCTGGCTTGTGTTGGAGTCACCTTGGGTTTCAGAAGCACCACAAAGATTGGAAATGCATACGGTAAGCATAGCAGTGGTATTTGTAATGACGCTTACGTCGTCCTTCCTGGTGCTAATCATGATTATGATTTGGAAAACCCCAATACTTCTCATTATCTCATATGTTCTTATCATCGGAAGCGTGGAGCTTATAAAGTACTACTACGAGCTCGAGCACAAAATTTCCCTGAAAAGCTCAATCAACTTGCCGTGGACAAAAACTTTTGCCGCATGCCTGGCCTCGCCATGTTCTATTCAGAACTCGTTCAAGGAATTCCTCCAATCTTCAGTCATTACGCGGCAAATGTGCCTGCTTTGCACTCAGTCCTGGTTTTTGTCTCCATCAAATCATTACCGATAAGCAAGGTTCCGTTGGAGGAGCGTTTTCTTTTCCGCAGAGTGGAGCCTAGAGAGCTTAATGTGTTCCGATGTGTCGCTAGATACGGGTACACAGATGTCCGAAATGAGAATGAACCCTTTGAAGGATTGCTGATAGAAAAATTGAAGGAGTTCATAAGGGATGACTTTTGGCTATCTCAAAGAATCATGCACATAACCGATGGAGAGAAATTGGAAAAGGAAGTTTCTGCTGAGTTAGAAGGTGATGATCATGAGTTGGTTAATGGAAATGGTAATAATGAGAATGAGAACGAAAACGAGAATGTAAAGCAAGTACTTGATGATGATGAAGATCAAAGGAAACAGCAAGACGATGTACTGTTGGAGACAGAGATTGAGGCGATTGACAAAGCGTGGCATCGGGGGGTTGTGCACTTAATTGGTGAGAATGAAGTGACGGCTGCGAAAGGAGCTGGGATAGCGAAAAGGATCTTGATTGATTATGCTTACAATTTCTTGAAGAGAAATCTGAGGCAGAGTGACAAAGTGTTTGATATTCCTCACAAGCGCATGTTAAAAGTGGGCATGACTTATGAACTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006814 GO:0008150 GO:0008324 GO:0009674 GO:0009987 GO:0010107 GO:0015075 GO:0015077 GO:0015079 GO:0015081 GO:0015291 GO:0015293 GO:0015294 GO:0015318 GO:0015370 GO:0015672 GO:0016020 GO:0022804 GO:0022857 GO:0022890 GO:0030001 GO:0034220 GO:0035725 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0071804 GO:0071805 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

K_trans

Protein Analysis

748

Amino Acids

84.19

Weight (kDa)

6.42

Isoelectric Point (pI)

32.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
K_trans	PF02705	78 - 410	4.1e-114	K+ potassium transporter integral membrane domain
K_trans	PF02705	409 - 444	2.3e-08	K+ potassium transporter integral membrane domain
K_trans_C	PF22776	514 - 748	8.1e-27	K+ potassium transporter C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001609)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g30541 FvH4_6g30550 FvH4_c6g00050 FvH4_c6g00050 FvH4_c6g00050
malus_domestica	MD03G1283500.v1.1 MD03G1283600.v1.1 MD10G1230200.v1.1 MD10G1230300.v1.1 MD11G1302600.v1.1 MD11G1302900.v1.1 MD11G1303100.v1.1
prunus_persica	Prupe.8G256200_v2.0.a1 Prupe.8G256200_v2.0.a1 Prupe.8G256200_v2.0.a1 Prupe.8G256200_v2.0.a1
pyrus_communis	pycom03g22450 pycom03g22460
rosa_chinensis	RchiOBHm_Chr2g0136981 RchiOBHm_Chr5g0020481 RchiOBHm_Chr6g0293251
rosa_laevigata	RLG00000011964 RLG00000033905
rosa_multiflora	Rmu_co8314359.1_g000001 Rmu_sc0001374.1_g000063 Rmu_sc0001374.1_g000064 Rmu_sc0021490.1_g000001 Rmu_ssc0000162.1_g000030
rosa_roxburghii	Rroxscaffold_2G00107800 Rroxscaffold_2G00107830 Rroxscaffold_7G00174310
rosa_rugosa	Rorug02G0336400 Rorug06G0233800 Rorug06G0233800 Rorug06G0233800
rosa_samantha	Rh2AG385800 Rh2BG392700 Rh2CG373000 Rh2DG047100 Rh2DG408800 Rh2DG408900 Rh3DG241600 Rh3DG283500 Rh6AG346700 Rh6BG354100 Rh6CG360600 Rh6DG347100
rosa_wichuraiana	Rw2G003360 Rw2G031570 Rw6G030180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1458
AasI	GACNNNNNNGTC	1 cut(s)	1361
AccI	GTMKAC	1 cut(s)	861
AccII	CGCG	2 cut(s)	507, 1604
AccIII	TCCGGA	2 cut(s)	91, 1243
AciI	CCGC	5 cut(s)	58, 505, 1534, 1604, 1699
AclWI	GGATC	5 cut(s)	35, 48, 102, 875, 2141
AcoI	YGGCCR	2 cut(s)	190, 1015
AcsI	RAATTY	3 cut(s)	517, 1486, 1578
AcuI	CTGAAG	4 cut(s)	27, 913, 1014, 1576
AcyI	GRCGYC	2 cut(s)	654, 858
AdeI	CACNNNGTG	1 cut(s)	173
AfiI	CCNNNNNNNGG	5 cut(s)	553, 772, 1178, 1705, 1787
AgsI	TTSAA	7 cut(s)	516, 874, 895, 1574, 1787, 1810, 2164
AhdI	GACNNNNNGTC	2 cut(s)	163, 486
AjnI	CCWGG	4 cut(s)	201, 1372, 1540, 1632
AluBI	AGCT	8 cut(s)	198, 565, 899, 1454, 1475, 1501, 1720, 2117
AluI	AGCT	8 cut(s)	198, 565, 899, 1454, 1475, 1501, 1720, 2117
Alw21I	GWGCWC	5 cut(s)	1055, 1116, 1477, 1483, 2079
Alw26I	GTCTC	3 cut(s)	258, 1648, 2024
Alw44I	GTGCAC	1 cut(s)	2075
AlwI	GGATC	5 cut(s)	35, 48, 102, 875, 2141
AlwNI	CAGNNNCTG	1 cut(s)	992
Ama87I	CYCGRG	1 cut(s)	1476
Aor13HI	TCCGGA	2 cut(s)	91, 1243
AoxI	GGCC	4 cut(s)	190, 1015, 1169, 1543
ApaLI	GTGCAC	1 cut(s)	2075
ApeKI	GCWGC	1 cut(s)	2105
ApoI	RAATTY	3 cut(s)	517, 1486, 1578
ArsI	GACNNNNNNTTYG	6 cut(s)	419, 451, 1111, 1143, 2177, 2209
Asp700I	GAANNNNTTC	3 cut(s)	1136, 1569, 1814
AspLEI	GCGC	1 cut(s)	2214
AsuC2I	CCSGG	1 cut(s)	1067
AsuHPI	GGTGA	9 cut(s)	176, 232, 270, 298, 361, 659, 1276, 1919, 2099
AsuII	TTCGAA	1 cut(s)	1130
AvaI	CYCGRG	1 cut(s)	1476
AxyI	CCTNAGG	1 cut(s)	548
BaeGI	GKGCMC	1 cut(s)	2079
BalI	TGGCCA	2 cut(s)	192, 1017
BamHI	GGATCC	1 cut(s)	40
BanII	GRGCYC	1 cut(s)	1477
BarI	GAAGNNNNNNTAC	4 cut(s)	60, 63, 92, 95
BbsI	GAAGAC	2 cut(s)	388, 507
Bbv12I	GWGCWC	5 cut(s)	1055, 1116, 1477, 1483, 2079
BbvI	GCAGC	1 cut(s)	2092
BccI	CCATC	4 cut(s)	374, 644, 1655, 1859
BceAI	ACGGC	3 cut(s)	1172, 1499, 2118
BcgI	CGANNNNNNTGC	2 cut(s)	198, 232
BciT130I	CCWGG	4 cut(s)	203, 1374, 1542, 1634
BclI	TGATCA	2 cut(s)	354, 1912
BcnI	CCSGG	1 cut(s)	1067
BcoDI	GTCTC	3 cut(s)	258, 1648, 2024
BfaI	CTAG	5 cut(s)	233, 537, 1124, 1713, 1743
BfmI	CTRYAG	2 cut(s)	805, 2243
BglI	GCCNNNNNGGC	1 cut(s)	1193
BisI	GCNGC	3 cut(s)	1534, 1605, 2106
BlsI	GCNGC	3 cut(s)	1535, 1606, 2107
BmcAI	AGTACT	4 cut(s)	78, 602, 1464, 1980
Bme1390I	CCNGG	5 cut(s)	203, 1067, 1374, 1542, 1634
BmeRI	GACNNNNNGTC	2 cut(s)	163, 486
BmeT110I	CYCGRG	1 cut(s)	1476
BmiI	GGNNCC	3 cut(s)	42, 1674, 1710
BmrFI	CCNGG	5 cut(s)	203, 1067, 1374, 1542, 1634
BmsI	GCATC	7 cut(s)	324, 566, 678, 762, 937, 1205, 2071
BpiI	GAAGAC	2 cut(s)	388, 507
Bpu14I	TTCGAA	1 cut(s)	1130
BpuEI	CTTGAG	1 cut(s)	548
BpuMI	CCSGG	1 cut(s)	1067
BsaAI	YACGTR	1 cut(s)	140
BsaBI	GATNNNNATC	2 cut(s)	39, 1995
BsaHI	GRCGYC	2 cut(s)	654, 858
BsaJI	CCNNGG	9 cut(s)	153, 187, 201, 202, 247, 468, 961, 1287, 1515
BsaWI	WCCGGW	3 cut(s)	91, 1088, 1243
Bsc4I	CCNNNNNNNGG	5 cut(s)	553, 772, 1178, 1705, 1787
Bse21I	CCTNAGG	1 cut(s)	548
Bse8I	GATNNNNATC	2 cut(s)	39, 1995
BseAI	TCCGGA	2 cut(s)	91, 1243
BseBI	CCWGG	4 cut(s)	203, 1374, 1542, 1634
BseDI	CCNNGG	9 cut(s)	153, 187, 201, 202, 247, 468, 961, 1287, 1515
BseGI	GGATG	3 cut(s)	88, 702, 1831
BseJI	GATNNNNATC	2 cut(s)	39, 1995
BseLI	CCNNNNNNNGG	5 cut(s)	553, 772, 1178, 1705, 1787
BseMII	CTCAG	5 cut(s)	687, 1068, 1641, 1887, 2165
BseRI	GAGGAG	1 cut(s)	1697
BseSI	GKGCMC	1 cut(s)	2079
BseXI	GCAGC	1 cut(s)	2092
BseYI	CCCAGC	1 cut(s)	2117
BsgI	GTGCAG	1 cut(s)	212
Bsh1236I	CGCG	2 cut(s)	507, 1604
BshFI	GGCC	4 cut(s)	192, 1017, 1171, 1545
BsiHKAI	GWGCWC	5 cut(s)	1055, 1116, 1477, 1483, 2079
BsiHKCI	CYCGRG	1 cut(s)	1476
BsiSI	CCGG	4 cut(s)	92, 1067, 1089, 1244
BslFI	GGGAC	2 cut(s)	445, 1242
BslI	CCNNNNNNNGG	5 cut(s)	553, 772, 1178, 1705, 1787
BsmAI	GTCTC	3 cut(s)	258, 1648, 2024
BsmFI	GGGAC	2 cut(s)	445, 1242
BsnI	GGCC	4 cut(s)	192, 1017, 1171, 1545
BsoBI	CYCGRG	1 cut(s)	1476
Bsp119I	TTCGAA	1 cut(s)	1130
Bsp1286I	GDGCHC	5 cut(s)	1055, 1116, 1477, 1483, 2079
Bsp13I	TCCGGA	2 cut(s)	91, 1243
Bsp143I	GATC	9 cut(s)	34, 40, 94, 354, 880, 1031, 1912, 1996, 2133
Bsp19I	CCATGG	1 cut(s)	187
BspACI	CCGC	5 cut(s)	58, 505, 1534, 1604, 1699
BspANI	GGCC	4 cut(s)	192, 1017, 1171, 1545
BspCNI	CTCAG	5 cut(s)	686, 1067, 1640, 1888, 2166
BspEI	TCCGGA	2 cut(s)	91, 1243
BspFNI	CGCG	2 cut(s)	507, 1604
BspHI	TCATGA	2 cut(s)	1384, 1915
BspLI	GGNNCC	3 cut(s)	42, 1674, 1710
BspPI	GGATC	5 cut(s)	35, 48, 102, 875, 2141
BspT104I	TTCGAA	1 cut(s)	1130
BssECI	CCNNGG	9 cut(s)	153, 187, 201, 202, 247, 468, 961, 1287, 1515
BssMI	GATC	9 cut(s)	34, 40, 94, 354, 880, 1031, 1912, 1996, 2133
BssNI	GRCGYC	2 cut(s)	654, 858
BssT1I	CCWWGG	5 cut(s)	153, 187, 247, 468, 1287
Bst2UI	CCWGG	4 cut(s)	203, 1374, 1542, 1634
Bst4CI	ACNGT	7 cut(s)	29, 182, 809, 889, 1027, 1328, 2025
Bst6I	CTCTTC	1 cut(s)	2159
BstACI	GRCGYC	2 cut(s)	654, 858
BstBAI	YACGTR	1 cut(s)	140
BstBI	TTCGAA	1 cut(s)	1130
BstC8I	GCNNGC	5 cut(s)	495, 1210, 1269, 1538, 1617
BstDEI	CTNAG	6 cut(s)	548, 673, 1054, 1627, 1896, 2174
BstDSI	CCRYGG	2 cut(s)	187, 1515
BstEII	GGTNACC	1 cut(s)	182
BstF5I	GGATG	3 cut(s)	88, 702, 1831
BstFNI	CGCG	2 cut(s)	507, 1604
BstHHI	GCGC	1 cut(s)	2214
BstKTI	GATC	9 cut(s)	37, 43, 97, 357, 883, 1034, 1915, 1999, 2136
BstMAI	GTCTC	3 cut(s)	258, 1648, 2024
BstMBI	GATC	9 cut(s)	34, 40, 94, 354, 880, 1031, 1912, 1996, 2133
BstNI	CCWGG	4 cut(s)	203, 1374, 1542, 1634
BstNSI	RCATGY	2 cut(s)	1540, 2218
BstPI	GGTNACC	1 cut(s)	182
BstSCI	CCNGG	5 cut(s)	201, 1065, 1372, 1540, 1632
BstSFI	CTRYAG	2 cut(s)	805, 2243
BstSLI	GKGCMC	1 cut(s)	2079
BstSNI	TACGTA	1 cut(s)	140
BstUI	CGCG	2 cut(s)	507, 1604
BstV1I	GCAGC	1 cut(s)	2092
BstV2I	GAAGAC	2 cut(s)	388, 507
BstX2I	RGATCY	2 cut(s)	40, 2133
BstYI	RGATCY	2 cut(s)	40, 2133
Bsu36I	CCTNAGG	1 cut(s)	548
BsuRI	GGCC	4 cut(s)	192, 1017, 1171, 1545
BtgI	CCRYGG	2 cut(s)	187, 1515
BtgZI	GCGATG	1 cut(s)	522
BtsCI	GGATG	3 cut(s)	88, 702, 1831
BtsI	GCAGTG	2 cut(s)	178, 1345
BtsIMutI	CAGTG	3 cut(s)	178, 1062, 1345
Cac8I	GCNNGC	5 cut(s)	495, 1210, 1269, 1538, 1617
CaiI	CAGNNNCTG	1 cut(s)	992
CciI	TCATGA	2 cut(s)	1384, 1915
CfoI	GCGC	1 cut(s)	2214
CseI	GACGC	3 cut(s)	643, 847, 1364
CspCI	CAANNNNNGTGG	4 cut(s)	607, 642, 1294, 1329
DdeI	CTNAG	6 cut(s)	548, 673, 1054, 1627, 1896, 2174
DpnI	GATC	9 cut(s)	36, 42, 96, 356, 882, 1033, 1914, 1998, 2135
DpnII	GATC	9 cut(s)	34, 40, 94, 354, 880, 1031, 1912, 1996, 2133
DraIII	CACNNNGTG	1 cut(s)	173
DrdI	GACNNNNNNGTC	1 cut(s)	1361
DriI	GACNNNNNGTC	2 cut(s)	163, 486
DseDI	GACNNNNNNGTC	1 cut(s)	1361
EaeI	YGGCCR	2 cut(s)	190, 1015
Eam1104I	CTCTTC	1 cut(s)	2159
Eam1105I	GACNNNNNGTC	2 cut(s)	163, 486
EarI	CTCTTC	1 cut(s)	2159
Ecl136II	GAGCTC	1 cut(s)	1475
Eco105I	TACGTA	1 cut(s)	140
Eco130I	CCWWGG	5 cut(s)	153, 187, 247, 468, 1287
Eco24I	GRGCYC	1 cut(s)	1477
Eco32I	GATATC	1 cut(s)	744
Eco53kI	GAGCTC	1 cut(s)	1475
Eco57I	CTGAAG	4 cut(s)	27, 913, 1014, 1576
Eco81I	CCTNAGG	1 cut(s)	548
Eco88I	CYCGRG	1 cut(s)	1476
Eco91I	GGTNACC	1 cut(s)	182
EcoICRI	GAGCTC	1 cut(s)	1475
EcoO65I	GGTNACC	1 cut(s)	182
EcoRI	GAATTC	1 cut(s)	1578
EcoRII	CCWGG	4 cut(s)	201, 1372, 1540, 1632
EcoRV	GATATC	1 cut(s)	744
EcoT14I	CCWWGG	5 cut(s)	153, 187, 247, 468, 1287
EcoT22I	ATGCAT	1 cut(s)	1324
EcoT38I	GRGCYC	1 cut(s)	1477
ErhI	CCWWGG	5 cut(s)	153, 187, 247, 468, 1287
FalI	AAGNNNNNCTT	2 cut(s)	380, 412
FaqI	GGGAC	2 cut(s)	445, 1242
FauNDI	CATATG	1 cut(s)	1427
FbaI	TGATCA	2 cut(s)	354, 1912
FblI	GTMKAC	1 cut(s)	861
Fnu4HI	GCNGC	3 cut(s)	1534, 1605, 2106
FokI	GGATG	3 cut(s)	75, 709, 1838
FriOI	GRGCYC	1 cut(s)	1477
Fsp4HI	GCNGC	3 cut(s)	1534, 1605, 2106
FspBI	CTAG	5 cut(s)	233, 537, 1124, 1713, 1743
GlaI	GCGC	1 cut(s)	2213
GluI	GCNGC	3 cut(s)	1534, 1605, 2106
GsaI	CCCAGC	1 cut(s)	2121
HaeIII	GGCC	4 cut(s)	192, 1017, 1171, 1545
HapII	CCGG	4 cut(s)	92, 1067, 1089, 1244
HgaI	GACGC	3 cut(s)	643, 847, 1364
HhaI	GCGC	1 cut(s)	2214
Hin1I	GRCGYC	2 cut(s)	654, 858
Hin6I	GCGC	1 cut(s)	2212
HinP1I	GCGC	1 cut(s)	2212
HincII	GTYRAC	2 cut(s)	178, 1252
HindII	GTYRAC	2 cut(s)	178, 1252
HindIII	AAGCTT	1 cut(s)	563
HinfI	GANTC	9 cut(s)	144, 149, 164, 481, 487, 1120, 1145, 1281, 1848
HpaII	CCGG	4 cut(s)	92, 1067, 1089, 1244
HphI	GGTGA	9 cut(s)	176, 232, 270, 298, 361, 659, 1276, 1919, 2099
Hpy166II	GTNNAC	8 cut(s)	178, 837, 862, 1237, 1252, 1519, 1755, 2077
Hpy188III	TCNNGA	9 cut(s)	38, 92, 931, 1227, 1244, 1385, 1916, 2137, 2161
Hpy8I	GTNNAC	8 cut(s)	178, 837, 862, 1237, 1252, 1519, 1755, 2077
Hpy99I	CGWCG	3 cut(s)	431, 728, 1367
HpyAV	CCTTC	8 cut(s)	313, 850, 1147, 1268, 1379, 1781, 1804, 1898
HpyCH4III	ACNGT	7 cut(s)	29, 182, 809, 889, 1027, 1328, 2025
HpyCH4IV	ACGT	4 cut(s)	139, 393, 434, 1362
HpyF3I	CTNAG	6 cut(s)	548, 673, 1054, 1627, 1896, 2174
HpySE526I	ACGT	4 cut(s)	139, 393, 434, 1362
Hsp92I	GRCGYC	2 cut(s)	654, 858
HspAI	GCGC	1 cut(s)	2212
Kpn2I	TCCGGA	2 cut(s)	91, 1243
Ksp22I	TGATCA	2 cut(s)	354, 1912
Kzo9I	GATC	9 cut(s)	34, 40, 94, 354, 880, 1031, 1912, 1996, 2133
LmnI	GCTCC	5 cut(s)	203, 1451, 1684, 1708, 2114
Lsp1109I	GCAGC	1 cut(s)	2092
LweI	GCATC	7 cut(s)	324, 566, 678, 762, 937, 1205, 2071
MaeI	CTAG	5 cut(s)	233, 537, 1124, 1713, 1743
MaeII	ACGT	4 cut(s)	139, 393, 434, 1362
MaeIII	GTNAC	7 cut(s)	135, 165, 182, 1057, 1282, 2098, 2183
MalI	GATC	9 cut(s)	36, 42, 96, 356, 882, 1033, 1914, 1998, 2135
MboI	GATC	9 cut(s)	34, 40, 94, 354, 880, 1031, 1912, 1996, 2133
MboII	GAAGA	8 cut(s)	20, 77, 388, 512, 862, 1582, 2006, 2176
MflI	RGATCY	2 cut(s)	40, 2133
MhlI	GDGCHC	5 cut(s)	1055, 1116, 1477, 1483, 2079
MlsI	TGGCCA	2 cut(s)	192, 1017
MluNI	TGGCCA	2 cut(s)	192, 1017
MlyI	GAGTC	7 cut(s)	143, 173, 475, 496, 1114, 1154, 1290
MmeI	TCCRAC	6 cut(s)	547, 670, 908, 1258, 1659, 2007
Mox20I	TGGCCA	2 cut(s)	192, 1017
Mph1103I	ATGCAT	1 cut(s)	1324
MroI	TCCGGA	2 cut(s)	91, 1243
MroXI	GAANNNNTTC	3 cut(s)	1136, 1569, 1814
MscI	TGGCCA	2 cut(s)	192, 1017
MseI	TTAA	7 cut(s)	374, 387, 567, 1722, 1926, 2081, 2219
MslI	CAYNNNNRTG	2 cut(s)	1338, 1389
Msp20I	TGGCCA	2 cut(s)	192, 1017
MspI	CCGG	4 cut(s)	92, 1067, 1089, 1244
MspR9I	CCNGG	5 cut(s)	203, 1067, 1374, 1542, 1634
MvaI	CCWGG	4 cut(s)	203, 1374, 1542, 1634
MvnI	CGCG	2 cut(s)	507, 1604
NciI	CCSGG	1 cut(s)	1067
NcoI	CCATGG	1 cut(s)	187
NdeI	CATATG	1 cut(s)	1427
NdeII	GATC	9 cut(s)	34, 40, 94, 354, 880, 1031, 1912, 1996, 2133
NlaIV	GGNNCC	3 cut(s)	42, 1674, 1710
NmuCI	GTSAC	6 cut(s)	165, 182, 1057, 1282, 2098, 2183
NsiI	ATGCAT	1 cut(s)	1324
NspI	RCATGY	2 cut(s)	1540, 2218
NspV	TTCGAA	1 cut(s)	1130
PaeI	GCATGC	1 cut(s)	1540
PaeR7I	CTCGAG	1 cut(s)	1476
PagI	TCATGA	2 cut(s)	1384, 1915
PasI	CCCWGGG	1 cut(s)	202
PcsI	WCGNNNNNNNCGW	3 cut(s)	399, 423, 1362
PdmI	GAANNNNTTC	3 cut(s)	1136, 1569, 1814
PfeI	GAWTC	2 cut(s)	144, 1848
PkrI	GCNGC	3 cut(s)	1535, 1606, 2107
PleI	GAGTC	7 cut(s)	143, 172, 475, 495, 1114, 1153, 1289
PpsI	GAGTC	7 cut(s)	143, 172, 475, 495, 1114, 1153, 1289
Ppu21I	YACGTR	1 cut(s)	140
PsiI	TTATAA	1 cut(s)	1458
Psp124BI	GAGCTC	1 cut(s)	1477
Psp6I	CCWGG	4 cut(s)	201, 1372, 1540, 1632
PspEI	GGTNACC	1 cut(s)	182
PspFI	CCCAGC	1 cut(s)	2117
PspGI	CCWGG	4 cut(s)	201, 1372, 1540, 1632
PspN4I	GGNNCC	3 cut(s)	42, 1674, 1710
PspXI	VCTCGAGB	1 cut(s)	1476
PstNI	CAGNNNCTG	1 cut(s)	992
PsuI	RGATCY	2 cut(s)	40, 2133
RseI	CAYNNNNRTG	2 cut(s)	1338, 1389
SacI	GAGCTC	1 cut(s)	1477
SaqAI	TTAA	7 cut(s)	374, 387, 567, 1722, 1926, 2081, 2219
SatI	GCNGC	3 cut(s)	1534, 1605, 2106
Sau3AI	GATC	9 cut(s)	34, 40, 94, 354, 880, 1031, 1912, 1996, 2133
ScaI	AGTACT	4 cut(s)	78, 602, 1464, 1980
SchI	GAGTC	7 cut(s)	143, 173, 475, 496, 1114, 1154, 1290
ScrFI	CCNGG	5 cut(s)	203, 1067, 1374, 1542, 1634
SduI	GDGCHC	5 cut(s)	1055, 1116, 1477, 1483, 2079
SfaNI	GCATC	7 cut(s)	324, 566, 678, 762, 937, 1205, 2071
SfcI	CTRYAG	2 cut(s)	805, 2243
Sfr274I	CTCGAG	1 cut(s)	1476
SfuI	TTCGAA	1 cut(s)	1130
SlaI	CTCGAG	1 cut(s)	1476
SmiMI	CAYNNNNRTG	2 cut(s)	1338, 1389
SmlI	CTYRAG	2 cut(s)	527, 1476
SmoI	CTYRAG	2 cut(s)	527, 1476
SnaBI	TACGTA	1 cut(s)	140
SphI	GCATGC	1 cut(s)	1540
SsiI	CCGC	5 cut(s)	58, 505, 1534, 1604, 1699
SspI	AATATT	1 cut(s)	18
SspMI	CTAG	5 cut(s)	233, 537, 1124, 1713, 1743
SstI	GAGCTC	1 cut(s)	1477
StyD4I	CCNGG	5 cut(s)	201, 1065, 1372, 1540, 1632
StyI	CCWWGG	5 cut(s)	153, 187, 247, 468, 1287
TaaI	ACNGT	7 cut(s)	29, 182, 809, 889, 1027, 1328, 2025
TaiI	ACGT	4 cut(s)	142, 396, 437, 1365
TaqI	TCGA	8 cut(s)	147, 162, 460, 560, 921, 1030, 1130, 1477
TaqII	GACCGA	1 cut(s)	737
TatI	WGTACW	5 cut(s)	76, 600, 1462, 1978, 2020
TauI	GCSGC	2 cut(s)	1536, 1607
TfiI	GAWTC	2 cut(s)	144, 1848
Tru1I	TTAA	7 cut(s)	374, 387, 567, 1722, 1926, 2081, 2219
Tru9I	TTAA	7 cut(s)	374, 387, 567, 1722, 1926, 2081, 2219
TscAI	CASTG	3 cut(s)	178, 1062, 1345
TseFI	GTSAC	6 cut(s)	165, 182, 1057, 1282, 2098, 2183
TseI	GCWGC	1 cut(s)	2105
Tsp45I	GTSAC	6 cut(s)	165, 182, 1057, 1282, 2098, 2183
TspDTI	ATGAA	9 cut(s)	114, 388, 713, 760, 832, 1791, 1807, 2007, 2109
TspGWI	ACGGA	1 cut(s)	1665
TspRI	CASTG	3 cut(s)	178, 1062, 1345
VneI	GTGCAC	1 cut(s)	2075
XapI	RAATTY	3 cut(s)	517, 1486, 1578
XceI	RCATGY	2 cut(s)	1540, 2218
XhoI	CTCGAG	1 cut(s)	1476
XmiI	GTMKAC	1 cut(s)	861
XmnI	GAANNNNTTC	3 cut(s)	1136, 1569, 1814
XspI	CTAG	5 cut(s)	233, 537, 1124, 1713, 1743
ZrmI	AGTACT	4 cut(s)	78, 602, 1464, 1980
Zsp2I	ATGCAT	1 cut(s)	1324

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.