Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0001609

Physical Location & Seq

Genomic Coordinates Forward (+)

31803097 .. 31807649

Gene Structure 4553 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00107800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2331 bp

ATGGCTACAGATGTAATACTGCAAAACACTGTGGAAGAGAAGGAAAGCCAGCATGGGGATCAAGTCTCTGAACAGCTCAAAGAGAATCAAGTAGTTTCAAGCCAAAAGTTTCAAAGATTTGACTCCTTGGACATCGAGTCTGGCAGTATCGCTGATCACAGGCACTCCAAGGAAGTGACGTGGTCCGTAATACTGACCCTGGCATTTCAGAGCATTGGAGTTGTGTATGGAGATCTTGGTACTTCACCACTTTATGTGTTCTCGAGCACCTTCCCCAATGGAATCAAAGATAAAGATGACATCTTGGGTGTTCTTTCTTTGATTCTTTATACAGTCACATTAATCCCCTTGATTAAGTATGTTCTCATCGTCCTACAAGCAAATGATAACGGCGATGGAGGGACATTTGCACTGTACTCTCTCTTATGTCGACACGCGAAGATTAGTTTGATTCCGAGCCAGCAAGAAGAGGATTCCGATGTTTCAAATTTCAAACTTGAAGTTCCTAGCAGACGTCTAAAAATGGCATCAACGCTTAAATCTGCACTGGAGAACAGTCACTTTGCCAAAGTCTTCTTACTCTTTGCCACAATGCTTGGCACTTCCATGCTCATTGGCGATGGTGTCCTCACTCCTTGCATCTCAGTTCTATCAGCTGTGGTTGGCATGAAGGGAGCTACGTCTGCAATGACAGAAGGTATGATTGTGTGGATATCGGTAGCCATCTTGATAGTCCTTTTCATGATCCAAAGATTTGGAACTGACAAAGTGGGCTACAGTTTTGCTCCAATACTTTGTATTTGGTTTCTATTCATTGGTGTCATCGGCATATACAATTTCATCAAATTTGATCCAATGGTTATCAAAGCCGTAAATCCACGATACATAGTGGATTACTTCATACGGAACAAGAAAGAAGCTTGGATCTCCCTTGGTGGCGTTATTCTATGCATAACAGGAGCTGAAGCTCTGTTTGCTGATGTTGGCCACTTCACTGTTCGATCCATACAAATTAGTACATGCGCGATTGTTTACCCATCTGTAGTGTTGGCTTACATTGGGCAAGCCTCTTTTCTTCGCAAGCATGCCGATCTTGTTGCTGATACCTTCTTCAAGTCTATACCAAGACCTCTATATTGGCCTATGTTTGTTGTTGCTGTATTAGCATCAATAATAGCAAGTCAATCCCTGATTTCTGCGACCTTTTCCATAATTCAACAATCTCTGTCATTAGGGTGTTTCCCTCGTGTGAAAGTCGTGCACACATCATCCAAGTATGAAGGACAAGTTTATATTCCGGAGGCCAACTTCATTCTTATGTTGGCTTGTGTAGGGGTCACCTTGGCTTTTAGGACCACTACAAAGATTGGAAATGCACTAGGTATAGCAGTGGTGTTTGTAATGACACTAACTTCATCATTCCTCGTGCTAATTATGATAATGATATGGAAAACCCACATACTTCTCATTATCTCATATGTTCTTATTATTGGAAGTATGGAGCTTCTGTATTTAAGTTCAGTCCTATACAAGTTTGACCAAGGGGGATATCTTCCAGTCGCCTTTGCCACTCTAATGATGGCTATAATGTTTGTTTGGAATGATGTTTATCGAAGAAAGTACTACTATGAGGTTGAACAGAAAATATCTCCTCAAAAGTTCAAGCAGATTGCTGATGATAGAAAATTTTGTCATATCCCTGGCCTCGCCATATTCTACTCGGAACTTGTTCATGGCATCCCACCCATTTTCAATCACTACTTAGCCAACGTGCCTGCATTGCACTCAGTCCTTGTTTTTGTCTCCATCAGACATTTACCCATAAGCAAGGTTCCGATGGAAGAGCGTCTCCTCTTCCGCCGAGTAGAGCCCAAGGAGCTTAATGTATTTCGATGTGTTGCGAGGTACGGGTATACAGATCTCTACAATGTGCAAGAACCCTTTGAAGAATTGTTGGTAAAAAAGTTGAAAGAGTTCGTGAAAGATGGTTGTTTCATACCCCAACAAACAAGTAATGGAGAGGTGTTTGAAAAGCAAGAAGAATTAAATGATGGATTGGTTGACAACGAGAATGAATTTGTTGAGATACAACAAGAAGAACTGATGGAGGCTGAGGTTCAACTTGAAGCAATAGATAAAGCATGGAGTTCAGGGGTTATTCACCTCATTGGTGAAAATGAAGTCATAGCTGCCAAAGGATCTGGTATAGCCAAAAGAATTTTGATTGATTATGCTTACAATTTTTTGAAGAGAAATTTGAGGCAGAGAGGCGAATTGTTTGAAATTCCTCGCAAGCGCATGCTAAAAGTGGGTATGACCTATGAACTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006814 GO:0008150 GO:0008324 GO:0009674 GO:0009987 GO:0010107 GO:0015075 GO:0015077 GO:0015079 GO:0015081 GO:0015291 GO:0015293 GO:0015294 GO:0015318 GO:0015370 GO:0015672 GO:0016020 GO:0022804 GO:0022857 GO:0022890 GO:0030001 GO:0034220 GO:0035725 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0071804 GO:0071805 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

K_trans

Protein Analysis

776

Amino Acids

87.27

Weight (kDa)

6.46

Isoelectric Point (pI)

31.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
K_trans	PF02705	67 - 554	3.3e-161	K+ potassium transporter integral membrane domain
K_trans_C	PF22776	567 - 776	3.2e-29	K+ potassium transporter C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001609)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g30541 FvH4_6g30550 FvH4_c6g00050 FvH4_c6g00050 FvH4_c6g00050
malus_domestica	MD03G1283500.v1.1 MD03G1283600.v1.1 MD10G1230200.v1.1 MD10G1230300.v1.1 MD11G1302600.v1.1 MD11G1302900.v1.1 MD11G1303100.v1.1
prunus_persica	Prupe.8G256200_v2.0.a1 Prupe.8G256200_v2.0.a1 Prupe.8G256200_v2.0.a1 Prupe.8G256200_v2.0.a1
pyrus_communis	pycom03g22450 pycom03g22460
rosa_chinensis	RchiOBHm_Chr2g0136981 RchiOBHm_Chr5g0020481 RchiOBHm_Chr6g0293251
rosa_laevigata	RLG00000011964 RLG00000033905
rosa_multiflora	Rmu_co8314359.1_g000001 Rmu_sc0001374.1_g000063 Rmu_sc0001374.1_g000064 Rmu_sc0021490.1_g000001 Rmu_ssc0000162.1_g000030
rosa_roxburghii	Rroxscaffold_2G00107800 Rroxscaffold_2G00107830 Rroxscaffold_7G00174310
rosa_rugosa	Rorug02G0336400 Rorug06G0233800 Rorug06G0233800 Rorug06G0233800
rosa_samantha	Rh2AG385800 Rh2BG392700 Rh2CG373000 Rh2DG047100 Rh2DG408800 Rh2DG408900 Rh3DG241600 Rh3DG283500 Rh6AG346700 Rh6BG354100 Rh6CG360600 Rh6DG347100
rosa_wichuraiana	Rw2G003360 Rw2G031570 Rw6G030180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	517
AccI	GTMKAC	2 cut(s)	430, 1913
AccII	CGCG	2 cut(s)	437, 1025
AccIII	TCCGGA	1 cut(s)	1297
AciI	CCGC	1 cut(s)	1858
AclWI	GGATC	6 cut(s)	66, 739, 845, 932, 996, 2206
AcoI	YGGCCR	1 cut(s)	985
AcsI	RAATTY	7 cut(s)	487, 845, 1685, 2075, 2217, 2254, 2283
AcuI	CTGAAG	1 cut(s)	984
AcyI	GRCGYC	1 cut(s)	514
AfaI	GTAC	5 cut(s)	241, 416, 1018, 1622, 1907
AfiI	CCNNNNNNNGG	1 cut(s)	55
AhdI	GACNNNNNGTC	1 cut(s)	136
AjiI	CACGTC	1 cut(s)	180
AjnI	CCWGG	2 cut(s)	198, 1699
AluBI	AGCT	9 cut(s)	76, 656, 677, 920, 962, 968, 1504, 1879, 2189
AluI	AGCT	9 cut(s)	76, 656, 677, 920, 962, 968, 1504, 1879, 2189
Alw21I	GWGCWC	2 cut(s)	269, 1263
Alw26I	GTCTC	3 cut(s)	70, 1807, 1853
Alw44I	GTGCAC	1 cut(s)	1259
AlwI	GGATC	6 cut(s)	66, 739, 845, 932, 996, 2206
AlwNI	CAGNNNCTG	1 cut(s)	962
Ama87I	CYCGRG	1 cut(s)	262
Aor13HI	TCCGGA	1 cut(s)	1297
AoxI	GGCC	4 cut(s)	985, 1139, 1302, 1702
ApaLI	GTGCAC	1 cut(s)	1259
ApeKI	GCWGC	1 cut(s)	2189
ApoI	RAATTY	7 cut(s)	487, 845, 1685, 2075, 2217, 2254, 2283
AseI	ATTAAT	1 cut(s)	341
Asp700I	GAANNNNTTC	2 cut(s)	1728, 1973
AspLEI	GCGC	2 cut(s)	1025, 2298
AspS9I	GGNCC	2 cut(s)	183, 1353
AsuHPI	GGTGA	4 cut(s)	237, 1330, 2153, 2183
AvaI	CYCGRG	1 cut(s)	262
AvaII	GGWCC	2 cut(s)	183, 1353
BaeGI	GKGCMC	1 cut(s)	1263
BalI	TGGCCA	1 cut(s)	987
BanII	GRGCYC	1 cut(s)	1872
BauI	CACGAG	2 cut(s)	1245, 1424
BbsI	GAAGAC	1 cut(s)	565
Bbv12I	GWGCWC	2 cut(s)	269, 1263
BbvCI	CCTCAGC	1 cut(s)	2112
BbvI	GCAGC	1 cut(s)	2176
BceAI	ACGGC	2 cut(s)	406, 854
BcgI	CGANNNNNNTGC	2 cut(s)	1079, 1113
BciT130I	CCWGG	2 cut(s)	200, 1701
BclI	TGATCA	1 cut(s)	154
BcoDI	GTCTC	3 cut(s)	70, 1807, 1853
BfaI	CTAG	2 cut(s)	507, 1379
BfmI	CTRYAG	3 cut(s)	6, 775, 1041
BglII	AGATCT	2 cut(s)	232, 1918
BisI	GCNGC	1 cut(s)	2190
BlsI	GCNGC	1 cut(s)	2191
BmcAI	AGTACT	1 cut(s)	1622
Bme1390I	CCNGG	2 cut(s)	200, 1701
Bme18I	GGWCC	2 cut(s)	183, 1353
BmeRI	GACNNNNNGTC	1 cut(s)	136
BmeT110I	CYCGRG	1 cut(s)	262
BmgBI	CACGTC	1 cut(s)	180
BmgT120I	GGNCC	2 cut(s)	183, 1353
BmiI	GGNNCC	1 cut(s)	1833
BmrFI	CCNGG	2 cut(s)	200, 1701
BmsI	GCATC	4 cut(s)	536, 648, 1175, 1746
BpiI	GAAGAC	1 cut(s)	565
BpmI	CTGGAG	1 cut(s)	569
Bpu10I	CCTNAGC	1 cut(s)	2112
BsaBI	GATNNNNATC	1 cut(s)	1608
BsaHI	GRCGYC	1 cut(s)	514
BsaJI	CCNNGG	8 cut(s)	126, 168, 198, 931, 1341, 1540, 1699, 1872
BsaWI	WCCGGW	1 cut(s)	1297
BsaXI	ACNNNNNCTCC	4 cut(s)	149, 179, 1493, 1523
Bsc4I	CCNNNNNNNGG	1 cut(s)	55
Bse1I	ACTGG	2 cut(s)	552, 1556
Bse3DI	GCAATG	2 cut(s)	693, 1778
Bse8I	GATNNNNATC	1 cut(s)	1608
BseAI	TCCGGA	1 cut(s)	1297
BseBI	CCWGG	2 cut(s)	200, 1701
BseDI	CCNNGG	8 cut(s)	126, 168, 198, 931, 1341, 1540, 1699, 1872
BseGI	GGATG	2 cut(s)	1268, 1737
BseJI	GATNNNNATC	1 cut(s)	1608
BseLI	CCNNNNNNNGG	1 cut(s)	55
BseMI	GCAATG	2 cut(s)	693, 1778
BseMII	CTCAG	3 cut(s)	657, 1800, 2103
BseNI	ACTGG	2 cut(s)	552, 1556
BseRI	GAGGAG	2 cut(s)	1641, 1841
BseSI	GKGCMC	1 cut(s)	1263
BseXI	GCAGC	1 cut(s)	2176
BsgI	GTGCAG	1 cut(s)	528
Bsh1236I	CGCG	2 cut(s)	437, 1025
BshFI	GGCC	4 cut(s)	987, 1141, 1304, 1704
BsiHKAI	GWGCWC	2 cut(s)	269, 1263
BsiHKCI	CYCGRG	1 cut(s)	262
BsiSI	CCGG	1 cut(s)	1298
BslFI	GGGAC	1 cut(s)	415
BslI	CCNNNNNNNGG	1 cut(s)	55
BsmAI	GTCTC	3 cut(s)	70, 1807, 1853
BsmBI	CGTCTC	1 cut(s)	1853
BsmFI	GGGAC	1 cut(s)	415
BsnI	GGCC	4 cut(s)	987, 1141, 1304, 1704
BsoBI	CYCGRG	1 cut(s)	262
Bsp1286I	GDGCHC	3 cut(s)	269, 1263, 1872
Bsp13I	TCCGGA	1 cut(s)	1297
BspACI	CCGC	1 cut(s)	1858
BspANI	GGCC	4 cut(s)	987, 1141, 1304, 1704
BspCNI	CTCAG	3 cut(s)	656, 1799, 2104
BspEI	TCCGGA	1 cut(s)	1297
BspFNI	CGCG	2 cut(s)	437, 1025
BspHI	TCATGA	1 cut(s)	741
BspLI	GGNNCC	1 cut(s)	1833
BspPI	GGATC	6 cut(s)	66, 739, 845, 932, 996, 2206
BspQI	GCTCTTC	1 cut(s)	1836
BsrDI	GCAATG	2 cut(s)	693, 1778
BsrI	ACTGG	2 cut(s)	552, 1556
BssECI	CCNNGG	8 cut(s)	126, 168, 198, 931, 1341, 1540, 1699, 1872
BssNAI	GTATAC	1 cut(s)	1914
BssNI	GRCGYC	1 cut(s)	514
BssSI	CACGAG	2 cut(s)	1245, 1424
BssT1I	CCWWGG	6 cut(s)	126, 168, 931, 1341, 1540, 1872
Bst1107I	GTATAC	1 cut(s)	1914
Bst2BI	CACGAG	2 cut(s)	1245, 1424
Bst2UI	CCWGG	2 cut(s)	200, 1701
Bst4CI	ACNGT	6 cut(s)	31, 334, 414, 557, 779, 997
Bst6I	CTCTTC	5 cut(s)	30, 462, 1836, 1859, 2243
BstACI	GRCGYC	1 cut(s)	514
BstC8I	GCNNGC	8 cut(s)	50, 461, 1065, 1082, 1086, 1776, 2294, 2300
BstDEI	CTNAG	4 cut(s)	643, 1762, 1786, 2112
BstEII	GGTNACC	1 cut(s)	1336
BstF5I	GGATG	2 cut(s)	1268, 1737
BstFNI	CGCG	2 cut(s)	437, 1025
BstHHI	GCGC	2 cut(s)	1025, 2298
BstMAI	GTCTC	3 cut(s)	70, 1807, 1853
BstMWI	GCNNNNNNNGC	5 cut(s)	683, 974, 1163, 1780, 1876
BstNI	CCWGG	2 cut(s)	200, 1701
BstNSI	RCATGY	3 cut(s)	1023, 1088, 2302
BstPI	GGTNACC	1 cut(s)	1336
BstSCI	CCNGG	2 cut(s)	198, 1699
BstSFI	CTRYAG	3 cut(s)	6, 775, 1041
BstSLI	GKGCMC	1 cut(s)	1263
BstUI	CGCG	2 cut(s)	437, 1025
BstV1I	GCAGC	1 cut(s)	2176
BstV2I	GAAGAC	1 cut(s)	565
BstX2I	RGATCY	4 cut(s)	232, 924, 1918, 2198
BstXI	CCANNNNNNTGG	1 cut(s)	755
BstYI	RGATCY	4 cut(s)	232, 924, 1918, 2198
BstZ17I	GTATAC	1 cut(s)	1914
BsuRI	GGCC	4 cut(s)	987, 1141, 1304, 1704
BtgZI	GCGATG	2 cut(s)	408, 633
BtrI	CACGTC	1 cut(s)	180
BtsCI	GGATG	2 cut(s)	1268, 1737
BtsI	GCAGTG	1 cut(s)	1395
BtsIMutI	CAGTG	5 cut(s)	27, 410, 545, 993, 1395
Cac8I	GCNNGC	8 cut(s)	50, 461, 1065, 1082, 1086, 1776, 2294, 2300
CaiI	CAGNNNCTG	1 cut(s)	962
CciI	TCATGA	1 cut(s)	741
CfoI	GCGC	2 cut(s)	1025, 2298
Cfr13I	GGNCC	2 cut(s)	183, 1353
CseI	GACGC	1 cut(s)	1835
Csp6I	GTAC	5 cut(s)	240, 415, 1017, 1621, 1906
CspCI	CAANNNNNGTGG	2 cut(s)	577, 612
CviAII	CATG	9 cut(s)	53, 607, 667, 742, 1020, 1085, 1733, 2142, 2299
CviQI	GTAC	5 cut(s)	240, 415, 1017, 1621, 1906
DdeI	CTNAG	4 cut(s)	643, 1762, 1786, 2112
DriI	GACNNNNNGTC	1 cut(s)	136
EaeI	YGGCCR	1 cut(s)	985
Eam1104I	CTCTTC	5 cut(s)	30, 462, 1836, 1859, 2243
Eam1105I	GACNNNNNGTC	1 cut(s)	136
EarI	CTCTTC	5 cut(s)	30, 462, 1836, 1859, 2243
EciI	GGCGGA	1 cut(s)	1847
Eco130I	CCWWGG	6 cut(s)	126, 168, 931, 1341, 1540, 1872
Eco24I	GRGCYC	1 cut(s)	1872
Eco32I	GATATC	2 cut(s)	714, 1550
Eco47I	GGWCC	2 cut(s)	183, 1353
Eco57I	CTGAAG	1 cut(s)	984
Eco88I	CYCGRG	1 cut(s)	262
Eco91I	GGTNACC	1 cut(s)	1336
EcoO65I	GGTNACC	1 cut(s)	1336
EcoRII	CCWGG	2 cut(s)	198, 1699
EcoRV	GATATC	2 cut(s)	714, 1550
EcoT14I	CCWWGG	6 cut(s)	126, 168, 931, 1341, 1540, 1872
EcoT22I	ATGCAT	1 cut(s)	953
EcoT38I	GRGCYC	1 cut(s)	1872
ErhI	CCWWGG	6 cut(s)	126, 168, 931, 1341, 1540, 1872
Esp3I	CGTCTC	1 cut(s)	1853
FaeI	CATG	9 cut(s)	56, 610, 670, 745, 1023, 1088, 1736, 2145, 2302
FaqI	GGGAC	1 cut(s)	415
FatI	CATG	9 cut(s)	52, 606, 666, 741, 1019, 1084, 1732, 2141, 2298
FauNDI	CATATG	1 cut(s)	1477
FbaI	TGATCA	1 cut(s)	154
FblI	GTMKAC	2 cut(s)	430, 1913
Fnu4HI	GCNGC	1 cut(s)	2190
FokI	GGATG	2 cut(s)	1255, 1724
FriOI	GRGCYC	1 cut(s)	1872
Fsp4HI	GCNGC	1 cut(s)	2190
FspBI	CTAG	2 cut(s)	507, 1379
GlaI	GCGC	2 cut(s)	1024, 2297
GluI	GCNGC	1 cut(s)	2190
GsuI	CTGGAG	1 cut(s)	569
HaeIII	GGCC	4 cut(s)	987, 1141, 1304, 1704
HapII	CCGG	1 cut(s)	1298
HgaI	GACGC	1 cut(s)	1835
HhaI	GCGC	2 cut(s)	1025, 2298
Hin1I	GRCGYC	1 cut(s)	514
Hin1II	CATG	9 cut(s)	56, 610, 670, 745, 1023, 1088, 1736, 2145, 2302
Hin6I	GCGC	2 cut(s)	1023, 2296
HinP1I	GCGC	2 cut(s)	1023, 2296
HincII	GTYRAC	2 cut(s)	431, 2062
HindII	GTYRAC	2 cut(s)	431, 2062
HindIII	AAGCTT	1 cut(s)	918
HinfI	GANTC	7 cut(s)	85, 122, 137, 282, 322, 451, 473
HpaII	CCGG	1 cut(s)	1298
HphI	GGTGA	4 cut(s)	237, 1330, 2153, 2183
Hpy166II	GTNNAC	5 cut(s)	431, 1033, 1261, 1914, 2062
Hpy188I	TCNGA	7 cut(s)	70, 210, 456, 478, 1723, 1811, 1836
Hpy188III	TCNNGA	5 cut(s)	262, 727, 742, 1298, 1978
Hpy8I	GTNNAC	5 cut(s)	431, 1033, 1261, 1914, 2062
HpyAV	CCTTC	6 cut(s)	34, 280, 664, 689, 1117, 1274
HpyCH4III	ACNGT	6 cut(s)	31, 334, 414, 557, 779, 997
HpyCH4IV	ACGT	4 cut(s)	179, 514, 680, 1770
HpyF10VI	GCNNNNNNNGC	5 cut(s)	683, 974, 1163, 1780, 1876
HpyF3I	CTNAG	4 cut(s)	643, 1762, 1786, 2112
HpySE526I	ACGT	4 cut(s)	179, 514, 680, 1770
Hsp92I	GRCGYC	1 cut(s)	514
Hsp92II	CATG	9 cut(s)	56, 610, 670, 745, 1023, 1088, 1736, 2145, 2302
HspAI	GCGC	2 cut(s)	1023, 2296
Kpn2I	TCCGGA	1 cut(s)	1297
Ksp22I	TGATCA	1 cut(s)	154
LguI	GCTCTTC	1 cut(s)	1836
LmnI	GCTCC	5 cut(s)	674, 790, 959, 1501, 1876
Lsp1109I	GCAGC	1 cut(s)	2176
LweI	GCATC	4 cut(s)	536, 648, 1175, 1746
MaeI	CTAG	2 cut(s)	507, 1379
MaeII	ACGT	4 cut(s)	179, 514, 680, 1770
MaeIII	GTNAC	4 cut(s)	175, 334, 557, 1336
MflI	RGATCY	4 cut(s)	232, 924, 1918, 2198
MhlI	GDGCHC	3 cut(s)	269, 1263, 1872
MlsI	TGGCCA	1 cut(s)	987
MluNI	TGGCCA	1 cut(s)	987
MlyI	GAGTC	2 cut(s)	116, 146
Mox20I	TGGCCA	1 cut(s)	987
Mph1103I	ATGCAT	1 cut(s)	953
MroI	TCCGGA	1 cut(s)	1297
MroXI	GAANNNNTTC	2 cut(s)	1728, 1973
MscI	TGGCCA	1 cut(s)	987
MseI	TTAA	6 cut(s)	341, 354, 537, 1514, 1881, 2045
MslI	CAYNNNNRTG	4 cut(s)	605, 1234, 1316, 1574
Msp20I	TGGCCA	1 cut(s)	987
MspA1I	CMGCKG	1 cut(s)	656
MspI	CCGG	1 cut(s)	1298
MspR9I	CCNGG	2 cut(s)	200, 1701
MvaI	CCWGG	2 cut(s)	200, 1701
MvnI	CGCG	2 cut(s)	437, 1025
MwoI	GCNNNNNNNGC	5 cut(s)	683, 974, 1163, 1780, 1876
NdeI	CATATG	1 cut(s)	1477
NlaIII	CATG	9 cut(s)	56, 610, 670, 745, 1023, 1088, 1736, 2145, 2302
NlaIV	GGNNCC	1 cut(s)	1833
NmeAIII	GCCGAG	1 cut(s)	1886
NmuCI	GTSAC	4 cut(s)	175, 334, 557, 1336
NsiI	ATGCAT	1 cut(s)	953
NspI	RCATGY	3 cut(s)	1023, 1088, 2302
PaeI	GCATGC	2 cut(s)	1088, 2302
PaeR7I	CTCGAG	1 cut(s)	262
PagI	TCATGA	1 cut(s)	741
PciSI	GCTCTTC	1 cut(s)	1836
PdmI	GAANNNNTTC	2 cut(s)	1728, 1973
PfeI	GAWTC	5 cut(s)	85, 282, 322, 451, 473
PflFI	GACNNNGTC	1 cut(s)	181
PkrI	GCNGC	1 cut(s)	2191
PleI	GAGTC	2 cut(s)	116, 145
PpsI	GAGTC	2 cut(s)	116, 145
PshBI	ATTAAT	1 cut(s)	341
Psp6I	CCWGG	2 cut(s)	198, 1699
PspEI	GGTNACC	1 cut(s)	1336
PspGI	CCWGG	2 cut(s)	198, 1699
PspN4I	GGNNCC	1 cut(s)	1833
PspPI	GGNCC	2 cut(s)	183, 1353
PstNI	CAGNNNCTG	1 cut(s)	962
PsuI	RGATCY	4 cut(s)	232, 924, 1918, 2198
PsyI	GACNNNGTC	1 cut(s)	181
PvuII	CAGCTG	1 cut(s)	656
RsaI	GTAC	5 cut(s)	241, 416, 1018, 1622, 1907
RsaNI	GTAC	5 cut(s)	240, 415, 1017, 1621, 1906
RseI	CAYNNNNRTG	4 cut(s)	605, 1234, 1316, 1574
SalI	GTCGAC	1 cut(s)	429
SapI	GCTCTTC	1 cut(s)	1836
SaqAI	TTAA	6 cut(s)	341, 354, 537, 1514, 1881, 2045
SatI	GCNGC	1 cut(s)	2190
Sau96I	GGNCC	2 cut(s)	183, 1353
ScaI	AGTACT	1 cut(s)	1622
SchI	GAGTC	2 cut(s)	116, 146
ScrFI	CCNGG	2 cut(s)	200, 1701
SduI	GDGCHC	3 cut(s)	269, 1263, 1872
SfaNI	GCATC	4 cut(s)	536, 648, 1175, 1746
SfcI	CTRYAG	3 cut(s)	6, 775, 1041
Sfr274I	CTCGAG	1 cut(s)	262
SinI	GGWCC	2 cut(s)	183, 1353
SlaI	CTCGAG	1 cut(s)	262
SmiMI	CAYNNNNRTG	4 cut(s)	605, 1234, 1316, 1574
SmlI	CTYRAG	1 cut(s)	262
SmoI	CTYRAG	1 cut(s)	262
SphI	GCATGC	2 cut(s)	1088, 2302
SsiI	CCGC	1 cut(s)	1858
SspMI	CTAG	2 cut(s)	507, 1379
StyD4I	CCNGG	2 cut(s)	198, 1699
StyI	CCWWGG	6 cut(s)	126, 168, 931, 1341, 1540, 1872
TaaI	ACNGT	6 cut(s)	31, 334, 414, 557, 779, 997
TaiI	ACGT	4 cut(s)	182, 517, 683, 1773
TaqI	TCGA	6 cut(s)	135, 263, 430, 1000, 1612, 1891
TatI	WGTACW	3 cut(s)	414, 1016, 1620
TfiI	GAWTC	5 cut(s)	85, 282, 322, 451, 473
Tru1I	TTAA	6 cut(s)	341, 354, 537, 1514, 1881, 2045
Tru9I	TTAA	6 cut(s)	341, 354, 537, 1514, 1881, 2045
TscAI	CASTG	5 cut(s)	34, 417, 552, 1000, 1395
TseFI	GTSAC	4 cut(s)	175, 334, 557, 1336
TseI	GCWGC	1 cut(s)	2189
Tsp45I	GTSAC	4 cut(s)	175, 334, 557, 1336
TspGWI	ACGGA	2 cut(s)	175, 919
TspRI	CASTG	5 cut(s)	34, 417, 552, 1000, 1395
Tth111I	GACNNNGTC	1 cut(s)	181
VneI	GTGCAC	1 cut(s)	1259
VpaK11BI	GGWCC	2 cut(s)	183, 1353
VspI	ATTAAT	1 cut(s)	341
XapI	RAATTY	7 cut(s)	487, 845, 1685, 2075, 2217, 2254, 2283
XceI	RCATGY	3 cut(s)	1023, 1088, 2302
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1576
XhoI	CTCGAG	1 cut(s)	262
XmiI	GTMKAC	2 cut(s)	430, 1913
XmnI	GAANNNNTTC	2 cut(s)	1728, 1973
XspI	CTAG	2 cut(s)	507, 1379
ZraI	GACGTC	1 cut(s)	515
ZrmI	AGTACT	1 cut(s)	1622
Zsp2I	ATGCAT	1 cut(s)	953

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.