Rh2CG373000

Potassium transporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0001609
Physical Location & Seq
Reverse (-)
50612813 .. 50614025
1213 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG373000.1

Sequence Viewer

Length: 384 bp
ATGGCTACAGATGTAATACTGCAAAACACTGTGGAAGAGGAGGAAAGCCAGCATGGGGATCAAGTCTCTGAACAGCTCAAAGAGAATCAACTAGTTTCAAGCCAAAAGTTTCAAAGATTTGACTCCTTGGACATCGAGTCTGGCAGTATCGCTGATCACAGGCACTCCAAGATTAGTTTGATTCCTAGCCAGCAAGAAGAGGATTCCGTTGTTTCAAATTTCAAACTTGAAGTTCCTAGCAGACGTCTAAAAATGGCATCAACGCTTAAATCTGCACTGGAGAACAGTCACTTTGCCAAAGTCTTCTTACTCTTTGCCACAATGCTTGGCACTTCCATGGTCATTGGCGATGGTGTCCTCACTCCTTGCATCTCAGGTTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
K_trans

Protein Analysis

127

Amino Acids

14.01

Weight (kDa)

4.97

Isoelectric Point (pI)

53.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 247
AclWI GGATC 1 cut(s) 66
AcsI RAATTY 1 cut(s) 217
AcyI GRCGYC 1 cut(s) 244
AfiI CCNNNNNNNGG 1 cut(s) 55
AgsI TTSAA 5 cut(s) 99, 113, 216, 223, 230
AhdI GACNNNNNGTC 1 cut(s) 136
AhlI ACTAGT 1 cut(s) 91
AluBI AGCT 1 cut(s) 76
AluI AGCT 1 cut(s) 76
Alw26I GTCTC 1 cut(s) 70
AlwI GGATC 1 cut(s) 66
ApoI RAATTY 1 cut(s) 217
BbsI GAAGAC 1 cut(s) 295
BccI CCATC 1 cut(s) 344
BclI TGATCA 1 cut(s) 154
BcoDI GTCTC 1 cut(s) 70
BcuI ACTAGT 1 cut(s) 91
BfaI CTAG 3 cut(s) 92, 186, 237
BfmI CTRYAG 1 cut(s) 6
BmeRI GACNNNNNGTC 1 cut(s) 136
BmsI GCATC 2 cut(s) 266, 378
BpiI GAAGAC 1 cut(s) 295
BpmI CTGGAG 1 cut(s) 299
BsaHI GRCGYC 1 cut(s) 244
BsaJI CCNNGG 2 cut(s) 126, 336
BsaXI ACNNNNNCTCC 2 cut(s) 149, 179
Bsc4I CCNNNNNNNGG 1 cut(s) 55
Bse1I ACTGG 1 cut(s) 282
BseDI CCNNGG 2 cut(s) 126, 336
BseLI CCNNNNNNNGG 1 cut(s) 55
BseNI ACTGG 1 cut(s) 282
BseRI GAGGAG 1 cut(s) 53
BsgI GTGCAG 1 cut(s) 258
BslI CCNNNNNNNGG 1 cut(s) 55
BsmAI GTCTC 1 cut(s) 70
Bsp143I GATC 2 cut(s) 58, 154
Bsp19I CCATGG 1 cut(s) 336
BspPI GGATC 1 cut(s) 66
BsrI ACTGG 1 cut(s) 282
BssECI CCNNGG 2 cut(s) 126, 336
BssMI GATC 2 cut(s) 58, 154
BssNI GRCGYC 1 cut(s) 244
BssT1I CCWWGG 2 cut(s) 126, 336
Bst4CI ACNGT 2 cut(s) 31, 287
Bst6I CTCTTC 2 cut(s) 30, 192
BstACI GRCGYC 1 cut(s) 244
BstC8I GCNNGC 2 cut(s) 50, 191
BstDEI CTNAG 1 cut(s) 373
BstDSI CCRYGG 1 cut(s) 336
BstKTI GATC 2 cut(s) 61, 157
BstMAI GTCTC 1 cut(s) 70
BstMBI GATC 2 cut(s) 58, 154
BstSFI CTRYAG 1 cut(s) 6
BstV2I GAAGAC 1 cut(s) 295
BtgI CCRYGG 1 cut(s) 336
BtgZI GCGATG 1 cut(s) 363
BtsIMutI CAGTG 2 cut(s) 27, 275
Cac8I GCNNGC 2 cut(s) 50, 191
CspCI CAANNNNNGTGG 2 cut(s) 307, 342
CviAII CATG 2 cut(s) 53, 337
CviJI RGCY 5 cut(s) 5, 48, 76, 102, 189
CviKI_1 RGCY 5 cut(s) 5, 48, 76, 102, 189
DdeI CTNAG 1 cut(s) 373
DpnI GATC 2 cut(s) 60, 156
DpnII GATC 2 cut(s) 58, 154
DriI GACNNNNNGTC 1 cut(s) 136
Eam1104I CTCTTC 2 cut(s) 30, 192
Eam1105I GACNNNNNGTC 1 cut(s) 136
EarI CTCTTC 2 cut(s) 30, 192
Eco130I CCWWGG 2 cut(s) 126, 336
EcoT14I CCWWGG 2 cut(s) 126, 336
ErhI CCWWGG 2 cut(s) 126, 336
FaeI CATG 2 cut(s) 56, 340
FaiI YATR 3 cut(s) 54, 338, 382
FatI CATG 2 cut(s) 52, 336
FbaI TGATCA 1 cut(s) 154
FspBI CTAG 3 cut(s) 92, 186, 237
GsuI CTGGAG 1 cut(s) 299
Hin1I GRCGYC 1 cut(s) 244
Hin1II CATG 2 cut(s) 56, 340
HinfI GANTC 5 cut(s) 85, 122, 137, 181, 203
Hpy188I TCNGA 1 cut(s) 70
HpyCH4III ACNGT 2 cut(s) 31, 287
HpyCH4IV ACGT 1 cut(s) 244
HpyCH4V TGCA 3 cut(s) 22, 275, 369
HpyF3I CTNAG 1 cut(s) 373
HpySE526I ACGT 1 cut(s) 244
Hsp92I GRCGYC 1 cut(s) 244
Hsp92II CATG 2 cut(s) 56, 340
Ksp22I TGATCA 1 cut(s) 154
Kzo9I GATC 2 cut(s) 58, 154
LpnPI CCDG 6 cut(s) 62, 126, 145, 203, 263, 360
LweI GCATC 2 cut(s) 266, 378
MaeI CTAG 3 cut(s) 92, 186, 237
MaeII ACGT 1 cut(s) 244
MaeIII GTNAC 1 cut(s) 287
MalI GATC 2 cut(s) 60, 156
MboI GATC 2 cut(s) 58, 154
MboII GAAGA 3 cut(s) 47, 209, 295
MluCI AATT 1 cut(s) 217
MlyI GAGTC 2 cut(s) 116, 146
MnlI CCTC 4 cut(s) 31, 34, 193, 368
MseI TTAA 1 cut(s) 267
MslI CAYNNNNRTG 1 cut(s) 335
NcoI CCATGG 1 cut(s) 336
NdeII GATC 2 cut(s) 58, 154
NlaIII CATG 2 cut(s) 56, 340
NmuCI GTSAC 1 cut(s) 287
PfeI GAWTC 3 cut(s) 85, 181, 203
PleI GAGTC 2 cut(s) 116, 145
PpsI GAGTC 2 cut(s) 116, 145
RseI CAYNNNNRTG 1 cut(s) 335
SaqAI TTAA 1 cut(s) 267
Sau3AI GATC 2 cut(s) 58, 154
SchI GAGTC 2 cut(s) 116, 146
SetI ASST 3 cut(s) 78, 247, 379
SfaNI GCATC 2 cut(s) 266, 378
SfcI CTRYAG 1 cut(s) 6
SmiMI CAYNNNNRTG 1 cut(s) 335
SpeI ACTAGT 1 cut(s) 91
Sse9I AATT 1 cut(s) 217
SspMI CTAG 3 cut(s) 92, 186, 237
StyI CCWWGG 2 cut(s) 126, 336
TaaI ACNGT 2 cut(s) 31, 287
TaiI ACGT 1 cut(s) 247
TaqI TCGA 1 cut(s) 135
TasI AATT 1 cut(s) 217
TfiI GAWTC 3 cut(s) 85, 181, 203
Tru1I TTAA 1 cut(s) 267
Tru9I TTAA 1 cut(s) 267
TscAI CASTG 2 cut(s) 34, 282
TseFI GTSAC 1 cut(s) 287
Tsp45I GTSAC 1 cut(s) 287
TspDTI ATGAA 1 cut(s) 369
TspGWI ACGGA 1 cut(s) 196
TspRI CASTG 2 cut(s) 34, 282
XapI RAATTY 1 cut(s) 217
XspI CTAG 3 cut(s) 92, 186, 237
ZraI GACGTC 1 cut(s) 245
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.