monooxygenase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| FMO-like | PF00743 | 36 - 348 | 1.1e-18 | Flavin-binding monooxygenase-like |
| Pyr_redox_3 | PF13738 | 39 - 237 | 2.1e-24 | Pyridine nucleotide-disulphide oxidoreductase |
| Lys_Orn_oxgnase | PF13434 | 103 - 232 | 7.8e-14 | L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase |
| Pyr_redox_2 | PF07992 | 141 - 237 | 4.1e-09 | Pyridine nucleotide-disulphide oxidoreductase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 911 |
| AccB1I | GGYRCC | 1 cut(s) | 911 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 429 |
| AccI | GTMKAC | 1 cut(s) | 816 |
| AccII | CGCG | 1 cut(s) | 173 |
| AccIII | TCCGGA | 1 cut(s) | 532 |
| AciI | CCGC | 2 cut(s) | 978, 1094 |
| AclWI | GGATC | 3 cut(s) | 169, 924, 1192 |
| AcoI | YGGCCR | 4 cut(s) | 144, 150, 897, 954 |
| AcsI | RAATTY | 2 cut(s) | 640, 1057 |
| AdeI | CACNNNGTG | 1 cut(s) | 18 |
| AfaI | GTAC | 7 cut(s) | 31, 341, 383, 720, 884, 913, 1036 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 148, 196, 219, 429, 857 |
| AflII | CTTAAG | 2 cut(s) | 49, 1067 |
| AflIII | ACRYGT | 1 cut(s) | 285 |
| AgsI | TTSAA | 4 cut(s) | 260, 542, 693, 944 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 355 |
| AjnI | CCWGG | 1 cut(s) | 141 |
| AleI | CACNNNNGTG | 2 cut(s) | 84, 314 |
| AluBI | AGCT | 6 cut(s) | 54, 165, 277, 811, 830, 834 |
| AluI | AGCT | 6 cut(s) | 54, 165, 277, 811, 830, 834 |
| Alw26I | GTCTC | 2 cut(s) | 248, 424 |
| AlwI | GGATC | 3 cut(s) | 169, 924, 1192 |
| Ama87I | CYCGRG | 1 cut(s) | 55 |
| Aor13HI | TCCGGA | 1 cut(s) | 532 |
| AoxI | GGCC | 8 cut(s) | 126, 139, 144, 150, 744, 848, 897, 954 |
| ApeKI | GCWGC | 1 cut(s) | 966 |
| ApoI | RAATTY | 2 cut(s) | 640, 1057 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 602 |
| Asp718I | GGTACC | 1 cut(s) | 911 |
| AspS9I | GGNCC | 4 cut(s) | 126, 131, 712, 860 |
| AsuC2I | CCSGG | 2 cut(s) | 595, 710 |
| AsuHPI | GGTGA | 1 cut(s) | 575 |
| AsuII | TTCGAA | 2 cut(s) | 606, 703 |
| AsuNHI | GCTAGC | 1 cut(s) | 830 |
| AvaI | CYCGRG | 1 cut(s) | 55 |
| AvaII | GGWCC | 3 cut(s) | 131, 712, 860 |
| BaeGI | GKGCMC | 1 cut(s) | 321 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 895, 928 |
| BalI | TGGCCA | 1 cut(s) | 146 |
| BanI | GGYRCC | 1 cut(s) | 911 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 22, 54, 866, 898 |
| BauI | CACGAG | 1 cut(s) | 82 |
| BbvI | GCAGC | 1 cut(s) | 978 |
| BccI | CCATC | 3 cut(s) | 463, 727, 1091 |
| BceAI | ACGGC | 1 cut(s) | 901 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 73, 107 |
| BciT130I | CCWGG | 1 cut(s) | 143 |
| BciVI | GTATCC | 1 cut(s) | 903 |
| BclI | TGATCA | 1 cut(s) | 412 |
| BcnI | CCSGG | 2 cut(s) | 595, 710 |
| BcoDI | GTCTC | 2 cut(s) | 248, 424 |
| BfaI | CTAG | 5 cut(s) | 15, 191, 662, 827, 831 |
| BfmI | CTRYAG | 1 cut(s) | 402 |
| BfrI | CTTAAG | 2 cut(s) | 49, 1067 |
| BfuI | GTATCC | 1 cut(s) | 903 |
| BisI | GCNGC | 1 cut(s) | 967 |
| BlpI | GCTNAGC | 1 cut(s) | 803 |
| BlsI | GCNGC | 1 cut(s) | 968 |
| BmcAI | AGTACT | 2 cut(s) | 31, 341 |
| Bme1390I | CCNGG | 3 cut(s) | 143, 595, 710 |
| Bme18I | GGWCC | 3 cut(s) | 131, 712, 860 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 355 |
| BmeT110I | CYCGRG | 1 cut(s) | 55 |
| BmgT120I | GGNCC | 4 cut(s) | 126, 131, 712, 860 |
| BmiI | GGNNCC | 4 cut(s) | 127, 460, 861, 913 |
| BmrFI | CCNGG | 3 cut(s) | 143, 595, 710 |
| BmrI | ACTGGG | 1 cut(s) | 516 |
| BmsI | GCATC | 1 cut(s) | 1186 |
| BmtI | GCTAGC | 1 cut(s) | 834 |
| BmuI | ACTGGG | 1 cut(s) | 516 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 803 |
| Bpu14I | TTCGAA | 2 cut(s) | 606, 703 |
| BpuEI | CTTGAG | 1 cut(s) | 709 |
| BpuMI | CCSGG | 2 cut(s) | 595, 710 |
| BsaAI | YACGTR | 1 cut(s) | 316 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1080 |
| BsaJI | CCNNGG | 2 cut(s) | 147, 676 |
| BsaWI | WCCGGW | 1 cut(s) | 532 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 148, 196, 219, 429, 857 |
| Bse118I | RCCGGY | 2 cut(s) | 128, 952 |
| Bse1I | ACTGG | 4 cut(s) | 328, 337, 511, 1042 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1080 |
| BseAI | TCCGGA | 1 cut(s) | 532 |
| BseBI | CCWGG | 1 cut(s) | 143 |
| BseDI | CCNNGG | 2 cut(s) | 147, 676 |
| BseGI | GGATG | 5 cut(s) | 161, 738, 1081, 1102, 1201 |
| BseJI | GATNNNNATC | 1 cut(s) | 1080 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 148, 196, 219, 429, 857 |
| BseMII | CTCAG | 1 cut(s) | 152 |
| BseNI | ACTGG | 4 cut(s) | 328, 337, 511, 1042 |
| BseRI | GAGGAG | 1 cut(s) | 488 |
| BseSI | GKGCMC | 1 cut(s) | 321 |
| BseX3I | CGGCCG | 1 cut(s) | 954 |
| BseXI | GCAGC | 1 cut(s) | 978 |
| Bsh1236I | CGCG | 1 cut(s) | 173 |
| Bsh1285I | CGRYCG | 2 cut(s) | 241, 957 |
| BshFI | GGCC | 8 cut(s) | 128, 141, 146, 152, 746, 850, 899, 956 |
| BshNI | GGYRCC | 1 cut(s) | 911 |
| BsiEI | CGRYCG | 2 cut(s) | 241, 957 |
| BsiHKCI | CYCGRG | 1 cut(s) | 55 |
| BslFI | GGGAC | 3 cut(s) | 291, 343, 1173 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 148, 196, 219, 429, 857 |
| BsmAI | GTCTC | 2 cut(s) | 248, 424 |
| BsmBI | CGTCTC | 1 cut(s) | 248 |
| BsmFI | GGGAC | 3 cut(s) | 291, 343, 1173 |
| BsnI | GGCC | 8 cut(s) | 128, 141, 146, 152, 746, 850, 899, 956 |
| BsoBI | CYCGRG | 1 cut(s) | 55 |
| Bsp119I | TTCGAA | 2 cut(s) | 606, 703 |
| Bsp1286I | GDGCHC | 1 cut(s) | 321 |
| Bsp13I | TCCGGA | 1 cut(s) | 532 |
| Bsp1407I | TGTACA | 1 cut(s) | 381 |
| Bsp143I | GATC | 7 cut(s) | 114, 174, 412, 924, 929, 1049, 1184 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 803 |
| Bsp19I | CCATGG | 2 cut(s) | 147, 676 |
| Bsp68I | TCGCGA | 1 cut(s) | 173 |
| BspACI | CCGC | 2 cut(s) | 978, 1094 |
| BspANI | GGCC | 8 cut(s) | 128, 141, 146, 152, 746, 850, 899, 956 |
| BspCNI | CTCAG | 1 cut(s) | 153 |
| BspEI | TCCGGA | 1 cut(s) | 532 |
| BspFNI | CGCG | 1 cut(s) | 173 |
| BspLI | GGNNCC | 4 cut(s) | 127, 460, 861, 913 |
| BspMAI | CTGCAG | 1 cut(s) | 406 |
| BspOI | GCTAGC | 1 cut(s) | 834 |
| BspPI | GGATC | 3 cut(s) | 169, 924, 1192 |
| BspT104I | TTCGAA | 2 cut(s) | 606, 703 |
| BspT107I | GGYRCC | 1 cut(s) | 911 |
| BspTI | CTTAAG | 2 cut(s) | 49, 1067 |
| BsrFI | RCCGGY | 2 cut(s) | 128, 952 |
| BsrGI | TGTACA | 1 cut(s) | 381 |
| BsrI | ACTGG | 4 cut(s) | 328, 337, 511, 1042 |
| BssAI | RCCGGY | 2 cut(s) | 128, 952 |
| BssECI | CCNNGG | 2 cut(s) | 147, 676 |
| BssMI | GATC | 7 cut(s) | 114, 174, 412, 924, 929, 1049, 1184 |
| BssSI | CACGAG | 1 cut(s) | 82 |
| BssT1I | CCWWGG | 2 cut(s) | 147, 676 |
| Bst2BI | CACGAG | 1 cut(s) | 82 |
| Bst2UI | CCWGG | 1 cut(s) | 143 |
| Bst4CI | ACNGT | 3 cut(s) | 206, 242, 436 |
| Bst6I | CTCTTC | 2 cut(s) | 43, 1165 |
| BstAFI | CTTAAG | 2 cut(s) | 49, 1067 |
| BstAUI | TGTACA | 1 cut(s) | 381 |
| BstBAI | YACGTR | 1 cut(s) | 316 |
| BstBI | TTCGAA | 2 cut(s) | 606, 703 |
| BstC8I | GCNNGC | 6 cut(s) | 167, 171, 739, 809, 832, 954 |
| BstDEI | CTNAG | 4 cut(s) | 161, 343, 803, 1188 |
| BstDSI | CCRYGG | 2 cut(s) | 147, 676 |
| BstF5I | GGATG | 5 cut(s) | 161, 738, 1081, 1102, 1201 |
| BstFNI | CGCG | 1 cut(s) | 173 |
| BstKTI | GATC | 7 cut(s) | 117, 177, 415, 927, 932, 1052, 1187 |
| BstMAI | GTCTC | 2 cut(s) | 248, 424 |
| BstMBI | GATC | 7 cut(s) | 114, 174, 412, 924, 929, 1049, 1184 |
| BstMCI | CGRYCG | 2 cut(s) | 241, 957 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 72, 743, 799, 808, 975 |
| BstNI | CCWGG | 1 cut(s) | 143 |
| BstNSI | RCATGY | 1 cut(s) | 289 |
| BstSCI | CCNGG | 3 cut(s) | 141, 593, 708 |
| BstSFI | CTRYAG | 1 cut(s) | 402 |
| BstSLI | GKGCMC | 1 cut(s) | 321 |
| BstUI | CGCG | 1 cut(s) | 173 |
| BstV1I | GCAGC | 1 cut(s) | 978 |
| BstX2I | RGATCY | 2 cut(s) | 929, 1184 |
| BstYI | RGATCY | 2 cut(s) | 929, 1184 |
| BstZI | CGGCCG | 1 cut(s) | 954 |
| BsuI | GTATCC | 1 cut(s) | 903 |
| BsuRI | GGCC | 8 cut(s) | 128, 141, 146, 152, 746, 850, 899, 956 |
| BtgI | CCRYGG | 2 cut(s) | 147, 676 |
| BtsCI | GGATG | 5 cut(s) | 161, 738, 1081, 1102, 1201 |
| BtuMI | TCGCGA | 1 cut(s) | 173 |
| Cac8I | GCNNGC | 6 cut(s) | 167, 171, 739, 809, 832, 954 |
| Cfr10I | RCCGGY | 2 cut(s) | 128, 952 |
| Cfr13I | GGNCC | 4 cut(s) | 126, 131, 712, 860 |
| Csp6I | GTAC | 7 cut(s) | 30, 340, 382, 719, 883, 912, 1035 |
| CviAII | CATG | 6 cut(s) | 148, 286, 649, 677, 716, 778 |
| CviQI | GTAC | 7 cut(s) | 30, 340, 382, 719, 883, 912, 1035 |
| DdeI | CTNAG | 4 cut(s) | 161, 343, 803, 1188 |
| DpnI | GATC | 7 cut(s) | 116, 176, 414, 926, 931, 1051, 1186 |
| DpnII | GATC | 7 cut(s) | 114, 174, 412, 924, 929, 1049, 1184 |
| DraI | TTTAAA | 1 cut(s) | 1089 |
| DraIII | CACNNNGTG | 1 cut(s) | 18 |
| DriI | GACNNNNNGTC | 1 cut(s) | 355 |
| EaeI | YGGCCR | 4 cut(s) | 144, 150, 897, 954 |
| EagI | CGGCCG | 1 cut(s) | 954 |
| Eam1104I | CTCTTC | 2 cut(s) | 43, 1165 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 355 |
| EarI | CTCTTC | 2 cut(s) | 43, 1165 |
| EclXI | CGGCCG | 1 cut(s) | 954 |
| Eco130I | CCWWGG | 2 cut(s) | 147, 676 |
| Eco32I | GATATC | 1 cut(s) | 1219 |
| Eco47I | GGWCC | 3 cut(s) | 131, 712, 860 |
| Eco52I | CGGCCG | 1 cut(s) | 954 |
| Eco88I | CYCGRG | 1 cut(s) | 55 |
| EcoO109I | RGGNCCY | 1 cut(s) | 860 |
| EcoRI | GAATTC | 1 cut(s) | 640 |
| EcoRII | CCWGG | 1 cut(s) | 141 |
| EcoRV | GATATC | 1 cut(s) | 1219 |
| EcoT14I | CCWWGG | 2 cut(s) | 147, 676 |
| ErhI | CCWWGG | 2 cut(s) | 147, 676 |
| Esp3I | CGTCTC | 1 cut(s) | 248 |
| FaeI | CATG | 6 cut(s) | 151, 289, 652, 680, 719, 781 |
| FaqI | GGGAC | 3 cut(s) | 291, 343, 1173 |
| FatI | CATG | 6 cut(s) | 147, 285, 648, 676, 715, 777 |
| FbaI | TGATCA | 1 cut(s) | 412 |
| FblI | GTMKAC | 1 cut(s) | 816 |
| Fnu4HI | GCNGC | 1 cut(s) | 967 |
| FokI | GGATG | 5 cut(s) | 168, 745, 1088, 1109, 1208 |
| Fsp4HI | GCNGC | 1 cut(s) | 967 |
| FspBI | CTAG | 5 cut(s) | 15, 191, 662, 827, 831 |
| GluI | GCNGC | 1 cut(s) | 967 |
| HaeIII | GGCC | 8 cut(s) | 128, 141, 146, 152, 746, 850, 899, 956 |
| Hin1II | CATG | 6 cut(s) | 151, 289, 652, 680, 719, 781 |
| HinfI | GANTC | 4 cut(s) | 398, 785, 940, 1102 |
| HphI | GGTGA | 1 cut(s) | 575 |
| Hpy166II | GTNNAC | 1 cut(s) | 817 |
| Hpy188I | TCNGA | 3 cut(s) | 162, 929, 1203 |
| Hpy188III | TCNNGA | 4 cut(s) | 57, 172, 533, 1167 |
| Hpy8I | GTNNAC | 1 cut(s) | 817 |
| Hpy99I | CGWCG | 2 cut(s) | 125, 1057 |
| HpyAV | CCTTC | 6 cut(s) | 144, 266, 433, 536, 592, 1126 |
| HpyCH4III | ACNGT | 3 cut(s) | 206, 242, 436 |
| HpyCH4IV | ACGT | 2 cut(s) | 315, 906 |
| HpyCH4V | TGCA | 3 cut(s) | 94, 404, 760 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 72, 743, 799, 808, 975 |
| HpyF3I | CTNAG | 4 cut(s) | 161, 343, 803, 1188 |
| HpySE526I | ACGT | 2 cut(s) | 315, 906 |
| Hsp92II | CATG | 6 cut(s) | 151, 289, 652, 680, 719, 781 |
| Kpn2I | TCCGGA | 1 cut(s) | 532 |
| KpnI | GGTACC | 1 cut(s) | 915 |
| KroI | GCCGGC | 1 cut(s) | 952 |
| KroNI | GCCGGC | 1 cut(s) | 954 |
| Ksp22I | TGATCA | 1 cut(s) | 412 |
| Kzo9I | GATC | 7 cut(s) | 114, 174, 412, 924, 929, 1049, 1184 |
| Lsp1109I | GCAGC | 1 cut(s) | 978 |
| LweI | GCATC | 1 cut(s) | 1186 |
| MaeI | CTAG | 5 cut(s) | 15, 191, 662, 827, 831 |
| MaeII | ACGT | 2 cut(s) | 315, 906 |
| MaeIII | GTNAC | 2 cut(s) | 518, 1115 |
| MalI | GATC | 7 cut(s) | 116, 176, 414, 926, 931, 1051, 1186 |
| MboI | GATC | 7 cut(s) | 114, 174, 412, 924, 929, 1049, 1184 |
| MboII | GAAGA | 6 cut(s) | 30, 33, 235, 563, 886, 1182 |
| MflI | RGATCY | 2 cut(s) | 929, 1184 |
| MhlI | GDGCHC | 1 cut(s) | 321 |
| MlsI | TGGCCA | 1 cut(s) | 146 |
| MluCI | AATT | 5 cut(s) | 266, 640, 1013, 1023, 1057 |
| MluNI | TGGCCA | 1 cut(s) | 146 |
| MlyI | GAGTC | 1 cut(s) | 407 |
| MmeI | TCCRAC | 1 cut(s) | 320 |
| Mox20I | TGGCCA | 1 cut(s) | 146 |
| MroI | TCCGGA | 1 cut(s) | 532 |
| MroNI | GCCGGC | 1 cut(s) | 952 |
| MroXI | GAANNNNTTC | 1 cut(s) | 602 |
| MscI | TGGCCA | 1 cut(s) | 146 |
| MseI | TTAA | 6 cut(s) | 50, 558, 773, 1044, 1068, 1088 |
| MslI | CAYNNNNRTG | 2 cut(s) | 84, 314 |
| Msp20I | TGGCCA | 1 cut(s) | 146 |
| MspCI | CTTAAG | 2 cut(s) | 49, 1067 |
| MspR9I | CCNGG | 3 cut(s) | 143, 595, 710 |
| MvaI | CCWGG | 1 cut(s) | 143 |
| MvnI | CGCG | 1 cut(s) | 173 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 72, 743, 799, 808, 975 |
| NaeI | GCCGGC | 1 cut(s) | 954 |
| NciI | CCSGG | 2 cut(s) | 595, 710 |
| NcoI | CCATGG | 2 cut(s) | 147, 676 |
| NdeII | GATC | 7 cut(s) | 114, 174, 412, 924, 929, 1049, 1184 |
| NgoMIV | GCCGGC | 1 cut(s) | 952 |
| NheI | GCTAGC | 1 cut(s) | 830 |
| NlaIII | CATG | 6 cut(s) | 151, 289, 652, 680, 719, 781 |
| NlaIV | GGNNCC | 4 cut(s) | 127, 460, 861, 913 |
| NruI | TCGCGA | 1 cut(s) | 173 |
| NspI | RCATGY | 1 cut(s) | 289 |
| NspV | TTCGAA | 2 cut(s) | 606, 703 |
| OliI | CACNNNNGTG | 2 cut(s) | 84, 314 |
| PaeR7I | CTCGAG | 1 cut(s) | 55 |
| PciI | ACATGT | 1 cut(s) | 285 |
| PdiI | GCCGGC | 1 cut(s) | 954 |
| PdmI | GAANNNNTTC | 1 cut(s) | 602 |
| PfeI | GAWTC | 3 cut(s) | 785, 940, 1102 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 429 |
| PfoI | TCCNGGA | 1 cut(s) | 593 |
| PkrI | GCNGC | 1 cut(s) | 968 |
| PleI | GAGTC | 1 cut(s) | 406 |
| PpsI | GAGTC | 1 cut(s) | 406 |
| Ppu21I | YACGTR | 1 cut(s) | 316 |
| PpuMI | RGGWCCY | 1 cut(s) | 860 |
| PscI | ACATGT | 1 cut(s) | 285 |
| Psp5II | RGGWCCY | 1 cut(s) | 860 |
| Psp6I | CCWGG | 1 cut(s) | 141 |
| PspGI | CCWGG | 1 cut(s) | 141 |
| PspN4I | GGNNCC | 4 cut(s) | 127, 460, 861, 913 |
| PspPI | GGNCC | 4 cut(s) | 126, 131, 712, 860 |
| PspPPI | RGGWCCY | 1 cut(s) | 860 |
| PstI | CTGCAG | 1 cut(s) | 406 |
| PsuI | RGATCY | 2 cut(s) | 929, 1184 |
| RruI | TCGCGA | 1 cut(s) | 173 |
| RsaI | GTAC | 7 cut(s) | 31, 341, 383, 720, 884, 913, 1036 |
| RsaNI | GTAC | 7 cut(s) | 30, 340, 382, 719, 883, 912, 1035 |
| RseI | CAYNNNNRTG | 2 cut(s) | 84, 314 |
| SaqAI | TTAA | 6 cut(s) | 50, 558, 773, 1044, 1068, 1088 |
| SatI | GCNGC | 1 cut(s) | 967 |
| Sau3AI | GATC | 7 cut(s) | 114, 174, 412, 924, 929, 1049, 1184 |
| Sau96I | GGNCC | 4 cut(s) | 126, 131, 712, 860 |
| ScaI | AGTACT | 2 cut(s) | 31, 341 |
| SchI | GAGTC | 1 cut(s) | 407 |
| ScrFI | CCNGG | 3 cut(s) | 143, 595, 710 |
| SduI | GDGCHC | 1 cut(s) | 321 |
| SfaNI | GCATC | 1 cut(s) | 1186 |
| SfcI | CTRYAG | 1 cut(s) | 402 |
| Sfr274I | CTCGAG | 1 cut(s) | 55 |
| SfuI | TTCGAA | 2 cut(s) | 606, 703 |
| SinI | GGWCC | 3 cut(s) | 131, 712, 860 |
| SlaI | CTCGAG | 1 cut(s) | 55 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 84, 314 |
| SmlI | CTYRAG | 4 cut(s) | 49, 55, 724, 1067 |
| SmoI | CTYRAG | 4 cut(s) | 49, 55, 724, 1067 |
| Sse9I | AATT | 5 cut(s) | 266, 640, 1013, 1023, 1057 |
| SsiI | CCGC | 2 cut(s) | 978, 1094 |
| SspI | AATATT | 2 cut(s) | 451, 764 |
| SspMI | CTAG | 5 cut(s) | 15, 191, 662, 827, 831 |
| StyD4I | CCNGG | 3 cut(s) | 141, 593, 708 |
| StyI | CCWWGG | 2 cut(s) | 147, 676 |
| TaaI | ACNGT | 3 cut(s) | 206, 242, 436 |
| TaiI | ACGT | 2 cut(s) | 318, 909 |
| TaqI | TCGA | 5 cut(s) | 56, 606, 703, 1052, 1166 |
| TasI | AATT | 5 cut(s) | 266, 640, 1013, 1023, 1057 |
| TatI | WGTACW | 5 cut(s) | 29, 339, 381, 718, 1034 |
| TfiI | GAWTC | 3 cut(s) | 785, 940, 1102 |
| Tru1I | TTAA | 6 cut(s) | 50, 558, 773, 1044, 1068, 1088 |
| Tru9I | TTAA | 6 cut(s) | 50, 558, 773, 1044, 1068, 1088 |
| TseI | GCWGC | 1 cut(s) | 966 |
| TspDTI | ATGAA | 3 cut(s) | 12, 887, 893 |
| TspGWI | ACGGA | 1 cut(s) | 834 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 429 |
| Vha464I | CTTAAG | 2 cut(s) | 49, 1067 |
| VpaK11BI | GGWCC | 3 cut(s) | 131, 712, 860 |
| XapI | RAATTY | 2 cut(s) | 640, 1057 |
| XceI | RCATGY | 1 cut(s) | 289 |
| XhoI | CTCGAG | 1 cut(s) | 55 |
| XmiI | GTMKAC | 1 cut(s) | 816 |
| XmnI | GAANNNNTTC | 1 cut(s) | 602 |
| XspI | CTAG | 5 cut(s) | 15, 191, 662, 827, 831 |
| ZrmI | AGTACT | 2 cut(s) | 31, 341 |