Rh6BG186500

monooxygenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0001076
Physical Location & Seq
Reverse (-)
34311400 .. 34316530
5131 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG186500.1

Sequence Viewer

Length: 576 bp
ATGTTGCGGTTAAATATAAGATTTAGCTTTACATTATATGAAATGAAATGTTGTGGTATGCGGCAGTTTCATTTTTTGTCAAGGAGGATGATGTACTGGGCCGTGGTTTTGGTGAGATATCTATCATTGAGCAAAGTGGAATCTTTGATGGTTTTGCTTAGCAAGCTGGTCTATGGAGACATGACCAAGTATGGGATAGCCAGGCCAAAAGAGGGCCCTTTCACTATGAAGATCAAGTACGGGAAGTACCCCGTCATTGATGTCGGCACCTGTAGTAAGATCAAGTCCGGCGAGATTCAGGTTTTACCCGCAGAAATAGCTAGCATAAGAGGAAACGATGTGGAACTCAAAAATGGGAAGTCATACCAATTTGAGTCCATCGTTTTCTGCACCGGATTCAAGAGATCAACATGTTCGTGGCTCAAGGGGGATGATTCTCTTTTGAAAGAAGGTGGGATTCCAAGACAAAGTGTTCCAAACCATTGGAAAGGACAGAAAGCCATATATACGAAAGATTGTGCCATGGAGGATCAGGTTCTCACGCCCCCTGGACTGCTTCTGTTGCAAGCTGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00380 ko01100 map00380 map01100
Pfam Domains
Protein Families
FMO-like K_oxygenase Pyr_redox_3

Protein Analysis

191

Amino Acids

21.77

Weight (kDa)

9.42

Isoelectric Point (pI)

26.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 266
AciI CCGC 3 cut(s) 7, 61, 309
AclWI GGATC 1 cut(s) 537
AfaI GTAC 3 cut(s) 95, 239, 248
AfiI CCNNNNNNNGG 2 cut(s) 192, 212
AflIII ACRYGT 1 cut(s) 410
AgsI TTSAA 2 cut(s) 400, 445
AjnI CCWGG 2 cut(s) 200, 547
AluBI AGCT 4 cut(s) 27, 166, 320, 569
AluI AGCT 4 cut(s) 27, 166, 320, 569
Alw26I GTCTC 1 cut(s) 171
AlwI GGATC 1 cut(s) 537
AoxI GGCC 3 cut(s) 99, 203, 214
ApaI GGGCCC 1 cut(s) 218
AspS9I GGNCC 3 cut(s) 99, 214, 215
AsuHPI GGTGA 1 cut(s) 124
AsuNHI GCTAGC 1 cut(s) 320
BaeGI GKGCMC 1 cut(s) 218
BanI GGYRCC 1 cut(s) 266
BanII GRGCYC 1 cut(s) 218
BarI GAAGNNNNNNTAC 2 cut(s) 221, 253
BccI CCATC 2 cut(s) 142, 386
BceAI ACGGC 1 cut(s) 86
BciT130I CCWGG 2 cut(s) 202, 549
BcoDI GTCTC 1 cut(s) 171
BfaI CTAG 1 cut(s) 321
BfmI CTRYAG 1 cut(s) 271
BisI GCNGC 1 cut(s) 62
BlpI GCTNAGC 1 cut(s) 158
BlsI GCNGC 1 cut(s) 63
Bme1390I CCNGG 2 cut(s) 202, 549
BmgT120I GGNCC 3 cut(s) 99, 214, 215
BmiI GGNNCC 2 cut(s) 216, 268
BmrFI CCNGG 2 cut(s) 202, 549
BmrI ACTGGG 1 cut(s) 106
BmtI GCTAGC 1 cut(s) 324
BmuI ACTGGG 1 cut(s) 106
Bpu1102I GCTNAGC 1 cut(s) 158
BpuEI CTTGAG 1 cut(s) 407
BsaBI GATNNNNATC 1 cut(s) 121
BsaJI CCNNGG 3 cut(s) 102, 522, 547
BsaWI WCCGGW 1 cut(s) 392
Bsc4I CCNNNNNNNGG 2 cut(s) 192, 212
Bse1I ACTGG 1 cut(s) 101
Bse8I GATNNNNATC 1 cut(s) 121
BseBI CCWGG 2 cut(s) 202, 549
BseDI CCNNGG 3 cut(s) 102, 522, 547
BseGI GGATG 2 cut(s) 93, 436
BseJI GATNNNNATC 1 cut(s) 121
BseLI CCNNNNNNNGG 2 cut(s) 192, 212
BseNI ACTGG 1 cut(s) 101
BseSI GKGCMC 1 cut(s) 218
BsgI GTGCAG 1 cut(s) 373
BshFI GGCC 3 cut(s) 101, 205, 216
BshNI GGYRCC 1 cut(s) 266
BsiSI CCGG 2 cut(s) 288, 393
BslI CCNNNNNNNGG 2 cut(s) 192, 212
BsmAI GTCTC 1 cut(s) 171
BsnI GGCC 3 cut(s) 101, 205, 216
Bsp120I GGGCCC 1 cut(s) 214
Bsp1286I GDGCHC 1 cut(s) 218
Bsp143I GATC 4 cut(s) 231, 279, 404, 529
Bsp1720I GCTNAGC 1 cut(s) 158
Bsp19I CCATGG 1 cut(s) 522
BspACI CCGC 3 cut(s) 7, 61, 309
BspANI GGCC 3 cut(s) 101, 205, 216
BspLI GGNNCC 2 cut(s) 216, 268
BspOI GCTAGC 1 cut(s) 324
BspPI GGATC 1 cut(s) 537
BspT107I GGYRCC 1 cut(s) 266
BsrI ACTGG 1 cut(s) 101
BssECI CCNNGG 3 cut(s) 102, 522, 547
BssMI GATC 4 cut(s) 231, 279, 404, 529
BssT1I CCWWGG 1 cut(s) 522
Bst2UI CCWGG 2 cut(s) 202, 549
BstC8I GCNNGC 3 cut(s) 164, 322, 567
BstDEI CTNAG 1 cut(s) 158
BstDSI CCRYGG 2 cut(s) 102, 522
BstF5I GGATG 2 cut(s) 93, 436
BstKTI GATC 4 cut(s) 234, 282, 407, 532
BstMAI GTCTC 1 cut(s) 171
BstMBI GATC 4 cut(s) 231, 279, 404, 529
BstMWI GCNNNNNNNGC 3 cut(s) 163, 317, 562
BstNI CCWGG 2 cut(s) 202, 549
BstNSI RCATGY 1 cut(s) 414
BstSCI CCNGG 2 cut(s) 200, 547
BstSFI CTRYAG 1 cut(s) 271
BstSLI GKGCMC 1 cut(s) 218
BstXI CCANNNNNNTGG 1 cut(s) 483
BsuRI GGCC 3 cut(s) 101, 205, 216
BtgI CCRYGG 2 cut(s) 102, 522
BtsCI GGATG 2 cut(s) 93, 436
Cac8I GCNNGC 3 cut(s) 164, 322, 567
Cfr13I GGNCC 3 cut(s) 99, 214, 215
Csp6I GTAC 3 cut(s) 94, 238, 247
CviAII CATG 3 cut(s) 181, 411, 523
CviQI GTAC 3 cut(s) 94, 238, 247
DdeI CTNAG 1 cut(s) 158
DpnI GATC 4 cut(s) 233, 281, 406, 531
DpnII GATC 4 cut(s) 231, 279, 404, 529
Eco130I CCWWGG 1 cut(s) 522
Eco24I GRGCYC 1 cut(s) 218
Eco32I GATATC 1 cut(s) 119
EcoO109I RGGNCCY 2 cut(s) 214, 215
EcoRII CCWGG 2 cut(s) 200, 547
EcoRV GATATC 1 cut(s) 119
EcoT14I CCWWGG 1 cut(s) 522
EcoT38I GRGCYC 1 cut(s) 218
ErhI CCWWGG 1 cut(s) 522
FaeI CATG 3 cut(s) 184, 414, 526
FatI CATG 3 cut(s) 180, 410, 522
FauI CCCGC 1 cut(s) 316
Fnu4HI GCNGC 1 cut(s) 62
FokI GGATG 2 cut(s) 100, 443
FriOI GRGCYC 1 cut(s) 218
Fsp4HI GCNGC 1 cut(s) 62
FspBI CTAG 1 cut(s) 321
GluI GCNGC 1 cut(s) 62
HaeIII GGCC 3 cut(s) 101, 205, 216
HapII CCGG 2 cut(s) 288, 393
Hin1II CATG 3 cut(s) 184, 414, 526
HinfI GANTC 6 cut(s) 140, 295, 374, 396, 434, 457
HpaII CCGG 2 cut(s) 288, 393
HphI GGTGA 1 cut(s) 124
Hpy188III TCNNGA 1 cut(s) 400
HpyAV CCTTC 1 cut(s) 443
HpyCH4V TGCA 2 cut(s) 390, 565
HpyF10VI GCNNNNNNNGC 3 cut(s) 163, 317, 562
HpyF3I CTNAG 1 cut(s) 158
Hsp92II CATG 3 cut(s) 184, 414, 526
Kzo9I GATC 4 cut(s) 231, 279, 404, 529
MaeI CTAG 1 cut(s) 321
MalI GATC 4 cut(s) 233, 281, 406, 531
MboI GATC 4 cut(s) 231, 279, 404, 529
MboII GAAGA 1 cut(s) 241
MhlI GDGCHC 1 cut(s) 218
MluCI AATT 1 cut(s) 368
MlyI GAGTC 1 cut(s) 383
MnlI CCTC 4 cut(s) 78, 205, 323, 520
MseI TTAA 1 cut(s) 11
MslI CAYNNNNRTG 1 cut(s) 415
MspI CCGG 2 cut(s) 288, 393
MspR9I CCNGG 2 cut(s) 202, 549
MvaI CCWGG 2 cut(s) 202, 549
MwoI GCNNNNNNNGC 3 cut(s) 163, 317, 562
NcoI CCATGG 1 cut(s) 522
NdeII GATC 4 cut(s) 231, 279, 404, 529
NheI GCTAGC 1 cut(s) 320
NlaIII CATG 3 cut(s) 184, 414, 526
NlaIV GGNNCC 2 cut(s) 216, 268
NspI RCATGY 1 cut(s) 414
PciI ACATGT 1 cut(s) 410
PfeI GAWTC 5 cut(s) 140, 295, 396, 434, 457
PkrI GCNGC 1 cut(s) 63
PleI GAGTC 1 cut(s) 382
PpsI GAGTC 1 cut(s) 382
PscI ACATGT 1 cut(s) 410
Psp6I CCWGG 2 cut(s) 200, 547
PspGI CCWGG 2 cut(s) 200, 547
PspN4I GGNNCC 2 cut(s) 216, 268
PspOMI GGGCCC 1 cut(s) 214
PspPI GGNCC 3 cut(s) 99, 214, 215
RsaI GTAC 3 cut(s) 95, 239, 248
RsaNI GTAC 3 cut(s) 94, 238, 247
RseI CAYNNNNRTG 1 cut(s) 415
SaqAI TTAA 1 cut(s) 11
SatI GCNGC 1 cut(s) 62
Sau3AI GATC 4 cut(s) 231, 279, 404, 529
Sau96I GGNCC 3 cut(s) 99, 214, 215
SchI GAGTC 1 cut(s) 383
ScrFI CCNGG 2 cut(s) 202, 549
SduI GDGCHC 1 cut(s) 218
SetI ASST 8 cut(s) 29, 168, 272, 303, 322, 454, 537, 571
SfcI CTRYAG 1 cut(s) 271
SmiMI CAYNNNNRTG 1 cut(s) 415
SmlI CTYRAG 1 cut(s) 422
SmoI CTYRAG 1 cut(s) 422
Sse9I AATT 1 cut(s) 368
SsiI CCGC 3 cut(s) 7, 61, 309
SspMI CTAG 1 cut(s) 321
StyD4I CCNGG 2 cut(s) 200, 547
StyI CCWWGG 1 cut(s) 522
TasI AATT 1 cut(s) 368
TatI WGTACW 1 cut(s) 93
TauI GCSGC 1 cut(s) 64
TfiI GAWTC 5 cut(s) 140, 295, 396, 434, 457
Tru1I TTAA 1 cut(s) 11
Tru9I TTAA 1 cut(s) 11
TspDTI ATGAA 4 cut(s) 54, 59, 59, 242
XceI RCATGY 1 cut(s) 414
XspI CTAG 1 cut(s) 321
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.