Rorug06G0228200

monooxygenase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Forward (+)
36677265 .. 36678113
849 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0228200.1

Sequence Viewer

Length: 315 bp
ATGCGTTGCACACAAGAACTTCATGAGGTCTTTGTTGAAGCTGTCAACCAGCTTGGTGGTGGTGAAAGAGTCACTCCTAAGGGTATCTTAAACGTCATGATGGTTGAAGGCTTCACAATGTATCATGTAAAAAGCCATTTACAGGTTCATTCTTCTCATGTGTTCAGTCATCCACCAATAACTTTTTCTTGGCCTGAAGACCTTGAACTTGCTCTTGAAGCCAAGAAGTTACAAGTTCAACATGGGAATAGCACTGTGAATGCCTTTTCAAGGGACTTGAAAGCTGCTAATCTTTTGATGGATGGAATGGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

104

Amino Acids

11.67

Weight (kDa)

5.93

Isoelectric Point (pI)

28.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 1 cut(s) 216
AfiI CCNNNNNNNGG 2 cut(s) 142, 270
AgsI TTSAA 7 cut(s) 38, 107, 206, 218, 239, 270, 280
AjuI GAANNNNNNNTTGG 2 cut(s) 169, 201
AluBI AGCT 3 cut(s) 41, 52, 284
AluI AGCT 3 cut(s) 41, 52, 284
AoxI GGCC 1 cut(s) 191
ApeKI GCWGC 1 cut(s) 284
AsuHPI GGTGA 1 cut(s) 74
AxyI CCTNAGG 1 cut(s) 78
BbsI GAAGAC 1 cut(s) 204
BbvI GCAGC 1 cut(s) 271
BccI CCATC 3 cut(s) 94, 292, 296
BisI GCNGC 1 cut(s) 285
BlsI GCNGC 1 cut(s) 286
BpiI GAAGAC 1 cut(s) 204
Bsc4I CCNNNNNNNGG 2 cut(s) 142, 270
Bse21I CCTNAGG 1 cut(s) 78
BseGI GGATG 2 cut(s) 169, 307
BseLI CCNNNNNNNGG 2 cut(s) 142, 270
BseXI GCAGC 1 cut(s) 271
BshFI GGCC 1 cut(s) 193
BslFI GGGAC 1 cut(s) 287
BslI CCNNNNNNNGG 2 cut(s) 142, 270
BsmFI GGGAC 1 cut(s) 287
BsmI GAATGC 1 cut(s) 265
BsnI GGCC 1 cut(s) 193
BspANI GGCC 1 cut(s) 193
BspHI TCATGA 2 cut(s) 22, 96
Bst4CI ACNGT 1 cut(s) 256
BstDEI CTNAG 1 cut(s) 78
BstENI CCTNNNNNAGG 1 cut(s) 268
BstF5I GGATG 2 cut(s) 169, 307
BstMWI GCNNNNNNNGC 1 cut(s) 218
BstV1I GCAGC 1 cut(s) 271
BstV2I GAAGAC 1 cut(s) 204
BstXI CCANNNNNNTGG 1 cut(s) 56
Bsu36I CCTNAGG 1 cut(s) 78
BsuRI GGCC 1 cut(s) 193
BtsCI GGATG 2 cut(s) 169, 307
BtsIMutI CAGTG 1 cut(s) 252
CciI TCATGA 2 cut(s) 22, 96
CviAII CATG 5 cut(s) 23, 97, 125, 158, 242
CviJI RGCY 7 cut(s) 41, 52, 111, 135, 193, 221, 284
CviKI_1 RGCY 7 cut(s) 41, 52, 111, 135, 193, 221, 284
DdeI CTNAG 1 cut(s) 78
Eco57I CTGAAG 1 cut(s) 216
Eco81I CCTNAGG 1 cut(s) 78
EcoNI CCTNNNNNAGG 1 cut(s) 268
FaeI CATG 5 cut(s) 26, 100, 128, 161, 245
FaiI YATR 5 cut(s) 24, 98, 126, 159, 243
FalI AAGNNNNNCTT 2 cut(s) 71, 103
FaqI GGGAC 1 cut(s) 287
FatI CATG 5 cut(s) 22, 96, 124, 157, 241
Fnu4HI GCNGC 1 cut(s) 285
FokI GGATG 1 cut(s) 156
Fsp4HI GCNGC 1 cut(s) 285
GluI GCNGC 1 cut(s) 285
HaeIII GGCC 1 cut(s) 193
Hin1II CATG 5 cut(s) 26, 100, 128, 161, 245
HincII GTYRAC 1 cut(s) 46
HindII GTYRAC 1 cut(s) 46
HinfI GANTC 1 cut(s) 69
HphI GGTGA 1 cut(s) 74
Hpy166II GTNNAC 1 cut(s) 46
Hpy188III TCNNGA 3 cut(s) 23, 97, 215
Hpy8I GTNNAC 1 cut(s) 46
HpyAV CCTTC 1 cut(s) 101
HpyCH4III ACNGT 1 cut(s) 256
HpyCH4IV ACGT 1 cut(s) 93
HpyCH4V TGCA 1 cut(s) 9
HpyF10VI GCNNNNNNNGC 1 cut(s) 218
HpyF3I CTNAG 1 cut(s) 78
HpySE526I ACGT 1 cut(s) 93
Hsp92II CATG 5 cut(s) 26, 100, 128, 161, 245
LpnPI CCDG 3 cut(s) 62, 128, 207
Lsp1109I GCAGC 1 cut(s) 271
MaeII ACGT 1 cut(s) 93
MaeIII GTNAC 2 cut(s) 70, 228
MboII GAAGA 2 cut(s) 144, 209
MlyI GAGTC 1 cut(s) 78
MnlI CCTC 1 cut(s) 19
MseI TTAA 1 cut(s) 89
Mva1269I GAATGC 1 cut(s) 265
MwoI GCNNNNNNNGC 1 cut(s) 218
NlaIII CATG 5 cut(s) 26, 100, 128, 161, 245
NmuCI GTSAC 1 cut(s) 70
PagI TCATGA 2 cut(s) 22, 96
PctI GAATGC 1 cut(s) 265
PkrI GCNGC 1 cut(s) 286
PleI GAGTC 1 cut(s) 77
PpsI GAGTC 1 cut(s) 77
SaqAI TTAA 1 cut(s) 89
SatI GCNGC 1 cut(s) 285
SchI GAGTC 1 cut(s) 78
SetI ASST 7 cut(s) 30, 43, 54, 96, 147, 204, 286
TaaI ACNGT 1 cut(s) 256
TaiI ACGT 1 cut(s) 96
Tru1I TTAA 1 cut(s) 89
Tru9I TTAA 1 cut(s) 89
TscAI CASTG 1 cut(s) 259
TseFI GTSAC 1 cut(s) 70
TseI GCWGC 1 cut(s) 284
Tsp45I GTSAC 1 cut(s) 70
TspDTI ATGAA 2 cut(s) 11, 137
TspRI CASTG 1 cut(s) 259
XagI CCTNNNNNAGG 1 cut(s) 268
XcmI CCANNNNNNNNNTGG 1 cut(s) 56
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.