Rh2DG113900

monooxygenase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Forward (+)
9425122 .. 9427919
2798 bp
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UTR
Exon/CDS
Intron
Rh2DG113900.1

Sequence Viewer

Length: 393 bp
ATGGAGGTTTCCAATTTCAATCAATTTTTGAAGAAAGCTCAGAAGCTACAAGCTACAACTTGGACAACAGTGAACGGTCGGTTTATCTATCTGAGGATCGGAGGGTGCATTAAATCGAGGCTGGCTCTGGGAATTCCGGCATGGAAATTGCTTTGGATCTGGCAAACGATGGTGCAAAGACTTCAATCACTGTTCAAAGCCCGCAAGCTGGTTTATGGAGACCTGACCCAAATCAAGTCCGGCGAGATTCAGGTTTTACCCGCAGAAATAGGCAGCATAAGAGGAAGCGATGTGGAACTCAAAAAGGGGAAGTCGTACCAGTTTGAGTCCATAGTTTTCTGCACCGGATTCAAGACATCAACAAGTTTGTGGCTCAAGATGATTATCTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

130

Amino Acids

14.91

Weight (kDa)

10.12

Isoelectric Point (pI)

19.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 202, 261
AclWI GGATC 2 cut(s) 104, 164
AcsI RAATTY 1 cut(s) 132
AfaI GTAC 1 cut(s) 317
AfiI CCNNNNNNNGG 1 cut(s) 208
AgsI TTSAA 5 cut(s) 19, 31, 185, 196, 352
AluBI AGCT 4 cut(s) 38, 46, 53, 208
AluI AGCT 4 cut(s) 38, 46, 53, 208
Alw26I GTCTC 1 cut(s) 213
AlwI GGATC 2 cut(s) 104, 164
ApeKI GCWGC 1 cut(s) 273
ApoI RAATTY 1 cut(s) 132
BbvI GCAGC 1 cut(s) 285
BccI CCATC 1 cut(s) 163
BcoDI GTCTC 1 cut(s) 213
BisI GCNGC 1 cut(s) 274
BlsI GCNGC 1 cut(s) 275
BplI GAGNNNNNCTC 2 cut(s) 109, 141
BpuEI CTTGAG 1 cut(s) 359
BsaBI GATNNNNATC 1 cut(s) 383
BsaI GGTCTC 1 cut(s) 213
BsaWI WCCGGW 1 cut(s) 344
Bsc4I CCNNNNNNNGG 1 cut(s) 208
Bse1I ACTGG 1 cut(s) 319
Bse8I GATNNNNATC 1 cut(s) 383
BseJI GATNNNNATC 1 cut(s) 383
BseLI CCNNNNNNNGG 1 cut(s) 208
BseMII CTCAG 2 cut(s) 53, 83
BseNI ACTGG 1 cut(s) 319
BseXI GCAGC 1 cut(s) 285
BsgI GTGCAG 1 cut(s) 325
Bsh1285I CGRYCG 1 cut(s) 79
BsiEI CGRYCG 1 cut(s) 79
BsiSI CCGG 3 cut(s) 137, 240, 345
BslI CCNNNNNNNGG 1 cut(s) 208
BsmAI GTCTC 1 cut(s) 213
Bso31I GGTCTC 1 cut(s) 213
Bsp143I GATC 2 cut(s) 96, 156
BspACI CCGC 2 cut(s) 202, 261
BspCNI CTCAG 2 cut(s) 52, 84
BspPI GGATC 2 cut(s) 104, 164
BspTNI GGTCTC 1 cut(s) 213
BsrI ACTGG 1 cut(s) 319
BssMI GATC 2 cut(s) 96, 156
Bst4CI ACNGT 3 cut(s) 70, 77, 192
BstC8I GCNNGC 3 cut(s) 123, 202, 206
BstDEI CTNAG 2 cut(s) 39, 92
BstKTI GATC 2 cut(s) 99, 159
BstMAI GTCTC 1 cut(s) 213
BstMBI GATC 2 cut(s) 96, 156
BstMCI CGRYCG 1 cut(s) 79
BstV1I GCAGC 1 cut(s) 285
BstX2I RGATCY 1 cut(s) 156
BstYI RGATCY 1 cut(s) 156
BtgZI GCGATG 1 cut(s) 303
BtsIMutI CAGTG 2 cut(s) 75, 188
Cac8I GCNNGC 3 cut(s) 123, 202, 206
Csp6I GTAC 1 cut(s) 316
CviAII CATG 1 cut(s) 141
CviJI RGCY 8 cut(s) 38, 46, 53, 121, 125, 200, 208, 373
CviKI_1 RGCY 8 cut(s) 38, 46, 53, 121, 125, 200, 208, 373
CviQI GTAC 1 cut(s) 316
DdeI CTNAG 2 cut(s) 39, 92
DpnI GATC 2 cut(s) 98, 158
DpnII GATC 2 cut(s) 96, 156
Eco31I GGTCTC 1 cut(s) 213
EcoRI GAATTC 1 cut(s) 132
FaeI CATG 1 cut(s) 144
FaiI YATR 4 cut(s) 142, 216, 278, 332
FatI CATG 1 cut(s) 140
FauI CCCGC 2 cut(s) 209, 268
Fnu4HI GCNGC 1 cut(s) 274
Fsp4HI GCNGC 1 cut(s) 274
GluI GCNGC 1 cut(s) 274
HapII CCGG 3 cut(s) 137, 240, 345
Hin1II CATG 1 cut(s) 144
HinfI GANTC 3 cut(s) 247, 326, 348
HpaII CCGG 3 cut(s) 137, 240, 345
Hpy166II GTNNAC 1 cut(s) 73
Hpy188I TCNGA 3 cut(s) 42, 93, 101
Hpy188III TCNNGA 2 cut(s) 352, 376
Hpy8I GTNNAC 1 cut(s) 73
HpyCH4III ACNGT 3 cut(s) 70, 77, 192
HpyCH4V TGCA 3 cut(s) 108, 175, 342
HpyF3I CTNAG 2 cut(s) 39, 92
Hsp92II CATG 1 cut(s) 144
Kzo9I GATC 2 cut(s) 96, 156
Lsp1109I GCAGC 1 cut(s) 285
MalI GATC 2 cut(s) 98, 158
MboI GATC 2 cut(s) 96, 156
MboII GAAGA 1 cut(s) 43
MflI RGATCY 1 cut(s) 156
MluCI AATT 4 cut(s) 13, 23, 132, 146
MlyI GAGTC 1 cut(s) 335
MnlI CCTC 4 cut(s) 87, 95, 111, 275
MseI TTAA 1 cut(s) 111
MspI CCGG 3 cut(s) 137, 240, 345
NdeII GATC 2 cut(s) 96, 156
NlaIII CATG 1 cut(s) 144
PfeI GAWTC 2 cut(s) 247, 348
PkrI GCNGC 1 cut(s) 275
PleI GAGTC 1 cut(s) 334
PpsI GAGTC 1 cut(s) 334
PsuI RGATCY 1 cut(s) 156
RsaI GTAC 1 cut(s) 317
RsaNI GTAC 1 cut(s) 316
SaqAI TTAA 1 cut(s) 111
SatI GCNGC 1 cut(s) 274
Sau3AI GATC 2 cut(s) 96, 156
SchI GAGTC 1 cut(s) 335
SetI ASST 7 cut(s) 9, 40, 48, 55, 210, 225, 255
SmlI CTYRAG 1 cut(s) 374
SmoI CTYRAG 1 cut(s) 374
Sse9I AATT 4 cut(s) 13, 23, 132, 146
SsiI CCGC 2 cut(s) 202, 261
TaaI ACNGT 3 cut(s) 70, 77, 192
TaqI TCGA 1 cut(s) 116
TasI AATT 4 cut(s) 13, 23, 132, 146
TfiI GAWTC 2 cut(s) 247, 348
Tru1I TTAA 1 cut(s) 111
Tru9I TTAA 1 cut(s) 111
TscAI CASTG 2 cut(s) 75, 195
TseI GCWGC 1 cut(s) 273
TspRI CASTG 2 cut(s) 75, 195
XapI RAATTY 1 cut(s) 132
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.