Rmu_sc0000239.1_g000054

monooxygenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000239.1
OG0001076
Physical Location & Seq
Reverse (-)
344519 .. 345959
1441 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000239.1_g000054.1.cds

Sequence Viewer

Length: 507 bp
atggaaattgctttggatctggcaaacgatggtgcaaagacttcaatcactgttcaaagcccggttcattttttgtcaagaaggatggtttacttggccttggttttgttaagatatctttcatttagcaaagtggattctttgatggttttgcttagcaagctggtttatggagacctgacccaaatcaattacagcaagtatccgaccattgatgtcggcacctgtagtaagatcaagtccggcgagattcaggttttactcgcagaaataggcagcataagaggaagcgatgtggaactcaaaaaggggaagtcgtaccaatttgagtccatcgttttctgcaccggattcaagacatcaacaagtttgtggctcaaggcagatgattatcttttgaaagaagatgggattccaagaccaagttctccaaaccattcaaagggacagaaggtttggagccaaaatttgtttaatcacctctcttcgggatacttgctacattga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00380 ko01100 map00380 map01100
Pfam Domains
Protein Families
FMO-like K_oxygenase Pyr_redox_3

Protein Analysis

168

Amino Acids

18.75

Weight (kDa)

9.0

Isoelectric Point (pI)

25.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 221
AclWI GGATC 1 cut(s) 24
AcsI RAATTY 1 cut(s) 466
AfaI GTAC 1 cut(s) 320
AfiI CCNNNNNNNGG 2 cut(s) 442, 487
AgsI TTSAA 5 cut(s) 45, 56, 355, 400, 441
AjuI GAANNNNNNNTTGG 2 cut(s) 409, 441
AluBI AGCT 1 cut(s) 163
AluI AGCT 1 cut(s) 163
Alw26I GTCTC 1 cut(s) 168
AlwI GGATC 1 cut(s) 24
AoxI GGCC 1 cut(s) 96
ApeKI GCWGC 1 cut(s) 276
ApoI RAATTY 1 cut(s) 466
ArsI GACNNNNNNTTYG 2 cut(s) 438, 470
AsuC2I CCSGG 1 cut(s) 62
AsuHPI GGTGA 1 cut(s) 470
BanI GGYRCC 1 cut(s) 221
BbvI GCAGC 1 cut(s) 288
BccI CCATC 5 cut(s) 23, 79, 139, 341, 401
BciVI GTATCC 2 cut(s) 213, 485
BcnI CCSGG 1 cut(s) 62
BcoDI GTCTC 1 cut(s) 168
BfmI CTRYAG 1 cut(s) 226
BfuI GTATCC 2 cut(s) 213, 485
BisI GCNGC 1 cut(s) 277
BlpI GCTNAGC 1 cut(s) 155
BlsI GCNGC 1 cut(s) 278
Bme1390I CCNGG 1 cut(s) 62
BmiI GGNNCC 2 cut(s) 223, 461
BmrFI CCNGG 1 cut(s) 62
Bpu1102I GCTNAGC 1 cut(s) 155
BpuEI CTTGAG 1 cut(s) 362
BpuMI CCSGG 1 cut(s) 62
BsaBI GATNNNNATC 1 cut(s) 390
BsaI GGTCTC 1 cut(s) 168
BsaJI CCNNGG 1 cut(s) 99
BsaWI WCCGGW 1 cut(s) 347
Bsc4I CCNNNNNNNGG 2 cut(s) 442, 487
Bse8I GATNNNNATC 1 cut(s) 390
BseDI CCNNGG 1 cut(s) 99
BseGI GGATG 1 cut(s) 90
BseJI GATNNNNATC 1 cut(s) 390
BseLI CCNNNNNNNGG 2 cut(s) 442, 487
BseXI GCAGC 1 cut(s) 288
BsgI GTGCAG 1 cut(s) 328
BshFI GGCC 1 cut(s) 98
BshNI GGYRCC 1 cut(s) 221
BsiSI CCGG 3 cut(s) 62, 243, 348
BslFI GGGAC 1 cut(s) 459
BslI CCNNNNNNNGG 2 cut(s) 442, 487
BsmAI GTCTC 1 cut(s) 168
BsmFI GGGAC 1 cut(s) 459
BsnI GGCC 1 cut(s) 98
Bso31I GGTCTC 1 cut(s) 168
Bsp143I GATC 2 cut(s) 16, 234
Bsp1720I GCTNAGC 1 cut(s) 155
BspANI GGCC 1 cut(s) 98
BspLI GGNNCC 2 cut(s) 223, 461
BspPI GGATC 1 cut(s) 24
BspT107I GGYRCC 1 cut(s) 221
BspTNI GGTCTC 1 cut(s) 168
BssECI CCNNGG 1 cut(s) 99
BssMI GATC 2 cut(s) 16, 234
BssT1I CCWWGG 1 cut(s) 99
Bst4CI ACNGT 1 cut(s) 52
Bst6I CTCTTC 1 cut(s) 490
BstC8I GCNNGC 1 cut(s) 161
BstDEI CTNAG 1 cut(s) 155
BstF5I GGATG 1 cut(s) 90
BstKTI GATC 2 cut(s) 19, 237
BstMAI GTCTC 1 cut(s) 168
BstMBI GATC 2 cut(s) 16, 234
BstMWI GCNNNNNNNGC 1 cut(s) 160
BstSCI CCNGG 1 cut(s) 60
BstSFI CTRYAG 1 cut(s) 226
BstV1I GCAGC 1 cut(s) 288
BstX2I RGATCY 1 cut(s) 16
BstYI RGATCY 1 cut(s) 16
BsuI GTATCC 2 cut(s) 213, 485
BsuRI GGCC 1 cut(s) 98
BtgZI GCGATG 1 cut(s) 306
BtsCI GGATG 1 cut(s) 90
BtsIMutI CAGTG 1 cut(s) 48
Cac8I GCNNGC 1 cut(s) 161
Csp6I GTAC 1 cut(s) 319
CviJI RGCY 5 cut(s) 60, 98, 163, 376, 462
CviKI_1 RGCY 5 cut(s) 60, 98, 163, 376, 462
CviQI GTAC 1 cut(s) 319
DdeI CTNAG 1 cut(s) 155
DpnI GATC 2 cut(s) 18, 236
DpnII GATC 2 cut(s) 16, 234
Eam1104I CTCTTC 1 cut(s) 490
EarI CTCTTC 1 cut(s) 490
Eco130I CCWWGG 1 cut(s) 99
Eco31I GGTCTC 1 cut(s) 168
Eco32I GATATC 1 cut(s) 116
EcoRV GATATC 1 cut(s) 116
EcoT14I CCWWGG 1 cut(s) 99
ErhI CCWWGG 1 cut(s) 99
FaiI YATR 2 cut(s) 171, 281
FaqI GGGAC 1 cut(s) 459
Fnu4HI GCNGC 1 cut(s) 277
FokI GGATG 1 cut(s) 97
Fsp4HI GCNGC 1 cut(s) 277
GluI GCNGC 1 cut(s) 277
HaeIII GGCC 1 cut(s) 98
HapII CCGG 3 cut(s) 62, 243, 348
HinfI GANTC 5 cut(s) 137, 250, 329, 351, 412
HpaII CCGG 3 cut(s) 62, 243, 348
HphI GGTGA 1 cut(s) 470
Hpy166II GTNNAC 1 cut(s) 91
Hpy188I TCNGA 1 cut(s) 207
Hpy188III TCNNGA 3 cut(s) 78, 355, 489
Hpy8I GTNNAC 1 cut(s) 91
HpyAV CCTTC 2 cut(s) 75, 445
HpyCH4III ACNGT 1 cut(s) 52
HpyCH4V TGCA 2 cut(s) 35, 345
HpyF10VI GCNNNNNNNGC 1 cut(s) 160
HpyF3I CTNAG 1 cut(s) 155
Kzo9I GATC 2 cut(s) 16, 234
LmnI GCTCC 1 cut(s) 459
LpnPI CCDG 8 cut(s) 5, 75, 149, 191, 238, 239, 256, 361
Lsp1109I GCAGC 1 cut(s) 288
MalI GATC 2 cut(s) 18, 236
MboI GATC 2 cut(s) 16, 234
MboII GAAGA 2 cut(s) 416, 477
MflI RGATCY 1 cut(s) 16
MluCI AATT 4 cut(s) 6, 190, 323, 466
MlyI GAGTC 1 cut(s) 338
MmeI TCCRAC 1 cut(s) 230
MnlI CCTC 2 cut(s) 278, 491
MseI TTAA 2 cut(s) 110, 474
MspI CCGG 3 cut(s) 62, 243, 348
MspR9I CCNGG 1 cut(s) 62
MwoI GCNNNNNNNGC 1 cut(s) 160
NciI CCSGG 1 cut(s) 62
NdeII GATC 2 cut(s) 16, 234
NlaIV GGNNCC 2 cut(s) 223, 461
PfeI GAWTC 4 cut(s) 137, 250, 351, 412
PkrI GCNGC 1 cut(s) 278
PleI GAGTC 1 cut(s) 337
PpsI GAGTC 1 cut(s) 337
PspN4I GGNNCC 2 cut(s) 223, 461
PsuI RGATCY 1 cut(s) 16
RsaI GTAC 1 cut(s) 320
RsaNI GTAC 1 cut(s) 319
SaqAI TTAA 2 cut(s) 110, 474
SatI GCNGC 1 cut(s) 277
Sau3AI GATC 2 cut(s) 16, 234
SchI GAGTC 1 cut(s) 338
ScrFI CCNGG 1 cut(s) 62
SetI ASST 6 cut(s) 165, 180, 227, 258, 456, 483
SfcI CTRYAG 1 cut(s) 226
SmlI CTYRAG 1 cut(s) 377
SmoI CTYRAG 1 cut(s) 377
Sse9I AATT 4 cut(s) 6, 190, 323, 466
StyD4I CCNGG 1 cut(s) 60
StyI CCWWGG 1 cut(s) 99
TaaI ACNGT 1 cut(s) 52
TasI AATT 4 cut(s) 6, 190, 323, 466
TfiI GAWTC 4 cut(s) 137, 250, 351, 412
Tru1I TTAA 2 cut(s) 110, 474
Tru9I TTAA 2 cut(s) 110, 474
TscAI CASTG 1 cut(s) 55
TseI GCWGC 1 cut(s) 276
TspDTI ATGAA 2 cut(s) 56, 111
TspRI CASTG 1 cut(s) 55
XapI RAATTY 1 cut(s) 466
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.