Rh2AG005700

monooxygenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0001076
Physical Location & Seq
Forward (+)
523220 .. 524657
1438 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG005700.1

Sequence Viewer

Length: 504 bp
ATGGAAATTGCTTTGGATCTGGCAAACGATGGTGCAAAGACTTCAATCACTGTTCAAAGTCCGGTTCATTTTTTGTCAAGAAGGATGGTTTACTTGGCCTTGGTTTTGTTAAGATATCTTTCATTTAGCAAAGTGGATTCTTTGATGGTTTTGCTTAGCAAGCTGGGCCCTTTCTTTATGAAGATCAATTACAGCAAGTATCCGACCATTGATGTCGGCACCTGTAGTAAGATCAAGTCCGGCGAGATTCAGGTTTTACCCGCAGAAATAGGCAGCATAAGAGGAAGCAATGTGGAACTCAAAAAGGGGAAGTCGTACCAGTTTGAGTCCATCGTTTTCTGCACCGGATTCAAGACATCAACAAGTTTGTGGCTCAAGGCAAATGATTATCTTTTGAAAGAAGATGGGATTCCAAGACCAAGTTATCCAAACCATTCAAAGGGACAGAAGGTTTGGAGCCAAAATTTGTTTAATCACCTCTCTTCGGGATACTCGCTACATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00380 ko01100 map00380 map01100
Pfam Domains
Protein Families
FMO-like K_oxygenase Pyr_redox_3

Protein Analysis

167

Amino Acids

18.72

Weight (kDa)

9.49

Isoelectric Point (pI)

27.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 218
AciI CCGC 1 cut(s) 261
AclWI GGATC 1 cut(s) 24
AcsI RAATTY 1 cut(s) 463
AfaI GTAC 1 cut(s) 317
AfiI CCNNNNNNNGG 2 cut(s) 439, 484
AgsI TTSAA 5 cut(s) 45, 56, 352, 397, 438
AluBI AGCT 1 cut(s) 163
AluI AGCT 1 cut(s) 163
AlwI GGATC 1 cut(s) 24
AoxI GGCC 2 cut(s) 96, 166
ApaI GGGCCC 1 cut(s) 170
ApeKI GCWGC 1 cut(s) 273
ApoI RAATTY 1 cut(s) 463
ArsI GACNNNNNNTTYG 2 cut(s) 435, 467
AspS9I GGNCC 2 cut(s) 166, 167
AsuHPI GGTGA 1 cut(s) 467
BaeGI GKGCMC 1 cut(s) 170
BanI GGYRCC 1 cut(s) 218
BanII GRGCYC 1 cut(s) 170
BarI GAAGNNNNNNTAC 2 cut(s) 173, 205
BbvI GCAGC 1 cut(s) 285
BccI CCATC 5 cut(s) 23, 79, 139, 338, 398
BciVI GTATCC 2 cut(s) 210, 482
BfmI CTRYAG 1 cut(s) 223
BfuI GTATCC 2 cut(s) 210, 482
BisI GCNGC 1 cut(s) 274
BlpI GCTNAGC 1 cut(s) 155
BlsI GCNGC 1 cut(s) 275
BmgT120I GGNCC 2 cut(s) 166, 167
BmiI GGNNCC 3 cut(s) 168, 220, 458
Bpu1102I GCTNAGC 1 cut(s) 155
BpuEI CTTGAG 1 cut(s) 359
BsaJI CCNNGG 1 cut(s) 99
BsaWI WCCGGW 2 cut(s) 61, 344
Bsc4I CCNNNNNNNGG 2 cut(s) 439, 484
Bse1I ACTGG 1 cut(s) 319
Bse3DI GCAATG 1 cut(s) 295
BseDI CCNNGG 1 cut(s) 99
BseGI GGATG 1 cut(s) 90
BseLI CCNNNNNNNGG 2 cut(s) 439, 484
BseMI GCAATG 1 cut(s) 295
BseNI ACTGG 1 cut(s) 319
BseSI GKGCMC 1 cut(s) 170
BseXI GCAGC 1 cut(s) 285
BseYI CCCAGC 1 cut(s) 163
BsgI GTGCAG 1 cut(s) 325
BshFI GGCC 2 cut(s) 98, 168
BshNI GGYRCC 1 cut(s) 218
BsiSI CCGG 3 cut(s) 62, 240, 345
BslFI GGGAC 1 cut(s) 456
BslI CCNNNNNNNGG 2 cut(s) 439, 484
BsmFI GGGAC 1 cut(s) 456
BsnI GGCC 2 cut(s) 98, 168
Bsp120I GGGCCC 1 cut(s) 166
Bsp1286I GDGCHC 1 cut(s) 170
Bsp143I GATC 3 cut(s) 16, 183, 231
Bsp1720I GCTNAGC 1 cut(s) 155
BspACI CCGC 1 cut(s) 261
BspANI GGCC 2 cut(s) 98, 168
BspLI GGNNCC 3 cut(s) 168, 220, 458
BspPI GGATC 1 cut(s) 24
BspT107I GGYRCC 1 cut(s) 218
BsrDI GCAATG 1 cut(s) 295
BsrI ACTGG 1 cut(s) 319
BssECI CCNNGG 1 cut(s) 99
BssMI GATC 3 cut(s) 16, 183, 231
BssT1I CCWWGG 1 cut(s) 99
Bst4CI ACNGT 1 cut(s) 52
Bst6I CTCTTC 1 cut(s) 487
BstC8I GCNNGC 1 cut(s) 161
BstDEI CTNAG 1 cut(s) 155
BstF5I GGATG 1 cut(s) 90
BstKTI GATC 3 cut(s) 19, 186, 234
BstMBI GATC 3 cut(s) 16, 183, 231
BstMWI GCNNNNNNNGC 2 cut(s) 160, 165
BstSFI CTRYAG 1 cut(s) 223
BstSLI GKGCMC 1 cut(s) 170
BstV1I GCAGC 1 cut(s) 285
BstX2I RGATCY 1 cut(s) 16
BstYI RGATCY 1 cut(s) 16
BsuI GTATCC 2 cut(s) 210, 482
BsuRI GGCC 2 cut(s) 98, 168
BtsCI GGATG 1 cut(s) 90
BtsIMutI CAGTG 1 cut(s) 48
Cac8I GCNNGC 1 cut(s) 161
Cfr13I GGNCC 2 cut(s) 166, 167
Csp6I GTAC 1 cut(s) 316
CviJI RGCY 5 cut(s) 98, 163, 168, 373, 459
CviKI_1 RGCY 5 cut(s) 98, 163, 168, 373, 459
CviQI GTAC 1 cut(s) 316
DdeI CTNAG 1 cut(s) 155
DpnI GATC 3 cut(s) 18, 185, 233
DpnII GATC 3 cut(s) 16, 183, 231
Eam1104I CTCTTC 1 cut(s) 487
EarI CTCTTC 1 cut(s) 487
Eco130I CCWWGG 1 cut(s) 99
Eco24I GRGCYC 1 cut(s) 170
Eco32I GATATC 1 cut(s) 116
EcoO109I RGGNCCY 1 cut(s) 167
EcoRV GATATC 1 cut(s) 116
EcoT14I CCWWGG 1 cut(s) 99
EcoT38I GRGCYC 1 cut(s) 170
ErhI CCWWGG 1 cut(s) 99
FaiI YATR 2 cut(s) 179, 278
FaqI GGGAC 1 cut(s) 456
FauI CCCGC 1 cut(s) 268
Fnu4HI GCNGC 1 cut(s) 274
FokI GGATG 1 cut(s) 97
FriOI GRGCYC 1 cut(s) 170
Fsp4HI GCNGC 1 cut(s) 274
GluI GCNGC 1 cut(s) 274
GsaI CCCAGC 1 cut(s) 167
HaeIII GGCC 2 cut(s) 98, 168
HapII CCGG 3 cut(s) 62, 240, 345
HinfI GANTC 5 cut(s) 137, 247, 326, 348, 409
HpaII CCGG 3 cut(s) 62, 240, 345
HphI GGTGA 1 cut(s) 467
Hpy166II GTNNAC 1 cut(s) 91
Hpy188I TCNGA 1 cut(s) 204
Hpy188III TCNNGA 3 cut(s) 78, 352, 486
Hpy8I GTNNAC 1 cut(s) 91
HpyAV CCTTC 2 cut(s) 75, 442
HpyCH4III ACNGT 1 cut(s) 52
HpyCH4V TGCA 2 cut(s) 35, 342
HpyF10VI GCNNNNNNNGC 2 cut(s) 160, 165
HpyF3I CTNAG 1 cut(s) 155
Kzo9I GATC 3 cut(s) 16, 183, 231
LmnI GCTCC 1 cut(s) 456
LpnPI CCDG 8 cut(s) 5, 75, 149, 235, 236, 253, 332, 358
Lsp1109I GCAGC 1 cut(s) 285
MalI GATC 3 cut(s) 18, 185, 233
MboI GATC 3 cut(s) 16, 183, 231
MboII GAAGA 3 cut(s) 193, 413, 474
MflI RGATCY 1 cut(s) 16
MhlI GDGCHC 1 cut(s) 170
MluCI AATT 3 cut(s) 6, 187, 463
MlyI GAGTC 1 cut(s) 335
MmeI TCCRAC 1 cut(s) 227
MnlI CCTC 2 cut(s) 275, 488
MseI TTAA 2 cut(s) 110, 471
MspI CCGG 3 cut(s) 62, 240, 345
MwoI GCNNNNNNNGC 2 cut(s) 160, 165
NdeII GATC 3 cut(s) 16, 183, 231
NlaIV GGNNCC 3 cut(s) 168, 220, 458
PfeI GAWTC 4 cut(s) 137, 247, 348, 409
PkrI GCNGC 1 cut(s) 275
PleI GAGTC 1 cut(s) 334
PpsI GAGTC 1 cut(s) 334
PspFI CCCAGC 1 cut(s) 163
PspN4I GGNNCC 3 cut(s) 168, 220, 458
PspOMI GGGCCC 1 cut(s) 166
PspPI GGNCC 2 cut(s) 166, 167
PsuI RGATCY 1 cut(s) 16
RsaI GTAC 1 cut(s) 317
RsaNI GTAC 1 cut(s) 316
SaqAI TTAA 2 cut(s) 110, 471
SatI GCNGC 1 cut(s) 274
Sau3AI GATC 3 cut(s) 16, 183, 231
Sau96I GGNCC 2 cut(s) 166, 167
SchI GAGTC 1 cut(s) 335
SduI GDGCHC 1 cut(s) 170
SetI ASST 5 cut(s) 165, 224, 255, 453, 480
SfcI CTRYAG 1 cut(s) 223
SmlI CTYRAG 1 cut(s) 374
SmoI CTYRAG 1 cut(s) 374
Sse9I AATT 3 cut(s) 6, 187, 463
SsiI CCGC 1 cut(s) 261
StyI CCWWGG 1 cut(s) 99
TaaI ACNGT 1 cut(s) 52
TasI AATT 3 cut(s) 6, 187, 463
TfiI GAWTC 4 cut(s) 137, 247, 348, 409
Tru1I TTAA 2 cut(s) 110, 471
Tru9I TTAA 2 cut(s) 110, 471
TscAI CASTG 1 cut(s) 55
TseI GCWGC 1 cut(s) 273
TspDTI ATGAA 3 cut(s) 56, 111, 194
TspRI CASTG 1 cut(s) 55
XapI RAATTY 1 cut(s) 463
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.